<86>Feb 12 09:08:16 userdel[2264825]: delete user 'rooter'
<86>Feb 12 09:08:16 groupadd[2264831]: group added to /etc/group: name=rooter, GID=765
<86>Feb 12 09:08:16 groupadd[2264831]: group added to /etc/gshadow: name=rooter
<86>Feb 12 09:08:16 groupadd[2264831]: new group: name=rooter, GID=765
<86>Feb 12 09:08:16 useradd[2264850]: new user: name=rooter, UID=765, GID=765, home=/root, shell=/bin/bash
<86>Feb 12 09:08:16 userdel[2264862]: delete user 'builder'
<86>Feb 12 09:08:16 userdel[2264862]: removed group 'builder' owned by 'builder'
<86>Feb 12 09:08:16 userdel[2264862]: removed shadow group 'builder' owned by 'builder'
<86>Feb 12 09:08:16 groupadd[2264874]: group added to /etc/group: name=builder, GID=766
<86>Feb 12 09:08:16 groupadd[2264874]: group added to /etc/gshadow: name=builder
<86>Feb 12 09:08:16 groupadd[2264874]: new group: name=builder, GID=766
<86>Feb 12 09:08:17 useradd[2264948]: new user: name=builder, UID=766, GID=766, home=/usr/src, shell=/bin/bash
warning: user mike does not exist - using root
warning: group mike does not exist - using root
warning: user mike does not exist - using root
warning: group mike does not exist - using root
warning: user mike does not exist - using root
warning: group mike does not exist - using root
warning: user mike does not exist - using root
warning: group mike does not exist - using root
warning: user mike does not exist - using root
warning: group mike does not exist - using root
warning: user mike does not exist - using root
warning: group mike does not exist - using root
warning: user mike does not exist - using root
warning: group mike does not exist - using root
warning: user mike does not exist - using root
warning: group mike does not exist - using root
warning: user mike does not exist - using root
warning: group mike does not exist - using root
<13>Feb 12 09:08:20 rpmi: xorg-proto-devel-2021.4-alt1 p9+272150.100.1.1 1621427342 installed
<13>Feb 12 09:08:20 rpmi: libXau-1.0.9-alt1 sisyphus+223149.200.2.1 1551268156 installed
<13>Feb 12 09:08:20 rpmi: libCVector-1.0.3.1-alt2 1316809894 installed
<13>Feb 12 09:08:20 rpmi: libquadmath0-8.4.1-alt0.p9.1 p9+247559.100.2.1 1585587756 installed
<13>Feb 12 09:08:21 rpmi: libgfortran5-8.4.1-alt0.p9.1 p9+247559.100.2.1 1585587756 installed
<13>Feb 12 09:08:21 rpmi: libCBFlib-0.9.2.3-alt2 sisyphus+223504.100.1.1 1551630301 installed
<13>Feb 12 09:08:21 rpmi: libquadmath8-devel-8.4.1-alt0.p9.1 p9+247559.100.2.1 1585587756 installed
<13>Feb 12 09:08:21 rpmi: libCVector-devel-1.0.3.1-alt2 1316809894 installed
<13>Feb 12 09:08:21 rpmi: libNearTree-5.1.1-alt1 sisyphus+220437.100.1.1 1549115239 installed
<13>Feb 12 09:08:21 rpmi: libXau-devel-1.0.9-alt1 sisyphus+223149.200.2.1 1551268156 installed
<13>Feb 12 09:08:21 rpmi: gcc-fortran-common-1.4.23-alt1 sisyphus+221902.2500.4.1 1550596716 installed
<13>Feb 12 09:08:21 rpmi: libgfortran8-devel-8.4.1-alt0.p9.1 p9+247559.100.2.1 1585587756 installed
<13>Feb 12 09:08:21 rpmi: libX11-locales-3:1.7.2-alt1 p9+273972.100.2.1 1623924318 installed
<13>Feb 12 09:08:21 rpmi: libXdmcp-1.1.3-alt1 sisyphus+225206.600.1.2 1552949347 installed
<13>Feb 12 09:08:21 rpmi: libxcb-1.13.1-alt1 sisyphus+226527.100.2.2 1554593799 installed
<13>Feb 12 09:08:21 rpmi: libX11-3:1.7.2-alt1 p9+273972.100.2.1 1623924318 installed
<13>Feb 12 09:08:21 rpmi: libXext-1.3.4-alt1 sisyphus+225206.700.1.2 1552949422 installed
<13>Feb 12 09:08:21 rpmi: libXi-1.7.9-alt2 sisyphus+226377.100.1.2 1554260258 installed
<13>Feb 12 09:08:21 rpmi: libXfixes-5.0.3-alt1 sisyphus+226736.100.2.2 1554614842 installed
<13>Feb 12 09:08:22 rpmi: libxcb-devel-1.13.1-alt1 sisyphus+226527.100.2.2 1554593799 installed
<13>Feb 12 09:08:22 rpmi: libX11-devel-3:1.7.2-alt1 p9+273972.100.2.1 1623924318 installed
<13>Feb 12 09:08:22 rpmi: libXext-devel-1.3.4-alt1 sisyphus+225206.700.1.2 1552949422 installed
<13>Feb 12 09:08:22 rpmi: libXfixes-devel-5.0.3-alt1 sisyphus+226736.100.2.2 1554614842 installed
<13>Feb 12 09:08:22 rpmi: libCQRlib-1.1.2-alt2 1316809842 installed
<13>Feb 12 09:08:22 rpmi: libCQRlib-devel-1.1.2-alt2 1316809842 installed
<13>Feb 12 09:08:22 rpmi: libXi-devel-1.7.9-alt2 sisyphus+226377.100.1.2 1554260258 installed
<13>Feb 12 09:08:22 rpmi: libgfortran-devel-8-alt2 p9+246536.100.3.1 1582643803 installed
<13>Feb 12 09:08:22 rpmi: libNearTree-devel-5.1.1-alt1 sisyphus+220437.100.1.1 1549115239 installed
<13>Feb 12 09:08:22 rpmi: libCBFlib-devel-0.9.2.3-alt2 sisyphus+223504.100.1.1 1551630301 installed
<13>Feb 12 09:08:22 rpmi: xorg-cf-files-1.0.6-alt1 1453137637 installed
<13>Feb 12 09:08:22 rpmi: imake-1.0.7-alt3 1518797773 installed
Building target platforms: x86_64
Building for target x86_64
Wrote: /usr/src/in/nosrpm/RasMol-2.7.5.2-alt4.nosrc.rpm (w1.gzdio)
Installing RasMol-2.7.5.2-alt4.src.rpm
Building target platforms: x86_64
Building for target x86_64
Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.95360
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ rm -rf RasMol-2.7.5.2
+ echo 'Source #0 (rasmol-2.7.5.2-13May11.tar.gz):'
Source #0 (rasmol-2.7.5.2-13May11.tar.gz):
+ /bin/gzip -dc /usr/src/RPM/SOURCES/rasmol-2.7.5.2-13May11.tar.gz
+ /bin/tar -xf -
+ cd RasMol-2.7.5.2
+ /bin/chmod -c -Rf u+rwX,go-w .
+ echo 'Patch #0 (RasMol-2.7.5-gentoo-bundled-lib.patch):'
Patch #0 (RasMol-2.7.5-gentoo-bundled-lib.patch):
+ /usr/bin/patch -p1
patching file src/Imakefile
patching file src/Makefile.in
+ sed -i 's,^#include \(<\|"\)cbf,#include \1cbf/cbf,' src/cif.h src/maps.c
+ exit 0
Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.50691
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd RasMol-2.7.5.2
+ CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2'
+ pushd src
~/RPM/BUILD/RasMol-2.7.5.2/src ~/RPM/BUILD/RasMol-2.7.5.2
+ xmkmf
imake -DUseInstalled -I/usr/share/X11/config
In file included from /usr/share/X11/config/Imake.tmpl:2145,
from Imakefile.c:34:
/usr/share/X11/config/X11.rules:39: warning: "XBinDir" redefined
# define XBinDir $(XPROJECTROOT)/bin
In file included from /usr/share/X11/config/site.def:155,
from /usr/share/X11/config/Imake.tmpl:116,
from Imakefile.c:34:
/usr/share/X11/config/host.def:14: note: this is the location of the previous definition
#define XBinDir /usr/bin
In file included from /usr/share/X11/config/Imake.tmpl:2145,
from Imakefile.c:34:
/usr/share/X11/config/X11.rules:47: warning: "XUsrLibDirPath" redefined
# define XUsrLibDirPath $(USRLIBDIR):$(XPROJECTROOT)/lib
In file included from /usr/share/X11/config/site.def:155,
from /usr/share/X11/config/Imake.tmpl:116,
from Imakefile.c:34:
/usr/share/X11/config/host.def:16: note: this is the location of the previous definition
#define XUsrLibDirPath /usr/lib64
+ subst s/-mcpu=i686/-mtune=i686/ Makefile
+ make clean rasmol DEPTHDEF=-DEIGHTBIT
make: Entering directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src'
rm -f rasmol._man
rm -f rasmol
rm -f gtkui.h rasmol.man
rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"*
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o rasmol.o rasmol.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from rasmol.c:203:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o molecule.o molecule.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from molecule.c:220:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o abstree.o abstree.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from abstree.c:81:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cmndline.o cmndline.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cmndline.c:82:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o command.o command.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from command.c:91:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
command.c: In function 'ShowRecordCommand':
command.c:1289:27: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,RecordTemplate);
^~~~~~~~~~~~~~
command.c: In function 'ShowPlayCommand':
command.c:1384:27: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,PlayTemplate);
^~~~~~~~~~~~
command.c: In function 'WriteMovieFrame':
command.c:1472:25: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,RecordTemplate);
^~~~~~~~~~~~~~
command.c: In function 'PlayMovieFrame':
command.c:1508:31: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,PlayTemplate);
^~~~~~~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o transfor.o transfor.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from transfor.c:198:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o render.o render.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from render.c:189:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o repres.o repres.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from repres.c:234:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o pixutils.o pixutils.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from pixutils.c:183:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o outfile.o outfile.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from outfile.c:170:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o script.o script.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from script.c:164:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o infile.o infile.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from infile.c:196:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o tokens.o tokens.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/string.h:26,
from tokens.c:194:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_fract.o cif_fract.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cif_fract.c:197:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif.o cif.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cif.c:278:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_ctonum.o cif_ctonum.c
cif_ctonum.c:198: warning: "_USE_RASMOL_H_" redefined
#define _USE_RASMOL_H_
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cif_ctonum.c:200:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_stx.o cif_stx.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from cif_stx.c:227:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o multiple.o multiple.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from multiple.c:225:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o vector.o vector.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from vector.c:159:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o wbrotate.o wbrotate.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from wbrotate.c:201:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o langsel_unix.o langsel_unix.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from langsel_unix.c:114:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o maps.o maps.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from maps.c:81:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o x11win.o x11win.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from x11win.c:232:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
rm -f rasmol
gcc -o rasmol -O2 -fno-strength-reduce -fno-strict-aliasing -L/usr/lib64 -L/usr/lib rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o x11win.o -lm -lXi -lXext -lX11 -lcbf -lCQRlib -lCVector -lCNearTree -lgfortran
make: Leaving directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src'
+ mv rasmol rasmol-8bpp
+ make clean rasmol DEPTHDEF=-DSIXTEENBIT
make: Entering directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src'
rm -f rasmol._man
rm -f rasmol
rm -f gtkui.h rasmol.man
rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"*
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o rasmol.o rasmol.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from rasmol.c:203:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o molecule.o molecule.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from molecule.c:220:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o abstree.o abstree.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from abstree.c:81:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cmndline.o cmndline.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cmndline.c:82:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o command.o command.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from command.c:91:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
command.c: In function 'ShowRecordCommand':
command.c:1289:27: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,RecordTemplate);
^~~~~~~~~~~~~~
command.c: In function 'ShowPlayCommand':
command.c:1384:27: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,PlayTemplate);
^~~~~~~~~~~~
command.c: In function 'WriteMovieFrame':
command.c:1472:25: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,RecordTemplate);
^~~~~~~~~~~~~~
command.c: In function 'PlayMovieFrame':
command.c:1508:31: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,PlayTemplate);
^~~~~~~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o transfor.o transfor.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from transfor.c:198:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o render.o render.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from render.c:189:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o repres.o repres.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from repres.c:234:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o pixutils.o pixutils.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from pixutils.c:183:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o outfile.o outfile.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from outfile.c:170:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o script.o script.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from script.c:164:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o infile.o infile.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from infile.c:196:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o tokens.o tokens.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/string.h:26,
from tokens.c:194:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_fract.o cif_fract.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cif_fract.c:197:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif.o cif.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cif.c:278:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_ctonum.o cif_ctonum.c
cif_ctonum.c:198: warning: "_USE_RASMOL_H_" redefined
#define _USE_RASMOL_H_
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cif_ctonum.c:200:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_stx.o cif_stx.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from cif_stx.c:227:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o multiple.o multiple.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from multiple.c:225:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o vector.o vector.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from vector.c:159:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o wbrotate.o wbrotate.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from wbrotate.c:201:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o langsel_unix.o langsel_unix.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from langsel_unix.c:114:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o maps.o maps.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from maps.c:81:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o x11win.o x11win.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from x11win.c:232:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
rm -f rasmol
gcc -o rasmol -O2 -fno-strength-reduce -fno-strict-aliasing -L/usr/lib64 -L/usr/lib rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o x11win.o -lm -lXi -lXext -lX11 -lcbf -lCQRlib -lCVector -lCNearTree -lgfortran
make: Leaving directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src'
+ mv rasmol rasmol-16bpp
+ make clean rasmol DEPTHDEF=-DTHIRTYTWOBIT
make: Entering directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src'
rm -f rasmol._man
rm -f rasmol
rm -f gtkui.h rasmol.man
rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"*
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o rasmol.o rasmol.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from rasmol.c:203:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o molecule.o molecule.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from molecule.c:220:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o abstree.o abstree.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from abstree.c:81:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cmndline.o cmndline.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cmndline.c:82:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o command.o command.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from command.c:91:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
command.c: In function 'ShowRecordCommand':
command.c:1289:27: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,RecordTemplate);
^~~~~~~~~~~~~~
command.c: In function 'ShowPlayCommand':
command.c:1384:27: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,PlayTemplate);
^~~~~~~~~~~~
command.c: In function 'WriteMovieFrame':
command.c:1472:25: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,RecordTemplate);
^~~~~~~~~~~~~~
command.c: In function 'PlayMovieFrame':
command.c:1508:31: warning: format not a string literal and no format arguments [-Wformat-security]
sprintf(param,PlayTemplate);
^~~~~~~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o transfor.o transfor.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from transfor.c:198:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o render.o render.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from render.c:189:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o repres.o repres.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from repres.c:234:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o pixutils.o pixutils.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from pixutils.c:183:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o outfile.o outfile.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from outfile.c:170:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o script.o script.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from script.c:164:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o infile.o infile.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from infile.c:196:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o tokens.o tokens.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/string.h:26,
from tokens.c:194:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_fract.o cif_fract.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cif_fract.c:197:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif.o cif.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cif.c:278:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_ctonum.o cif_ctonum.c
cif_ctonum.c:198: warning: "_USE_RASMOL_H_" redefined
#define _USE_RASMOL_H_
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from cif_ctonum.c:200:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_stx.o cif_stx.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from cif_stx.c:227:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o multiple.o multiple.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from multiple.c:225:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o vector.o vector.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from vector.c:159:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o wbrotate.o wbrotate.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/math.h:27,
from rasmol.h:163,
from wbrotate.c:201:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o langsel_unix.o langsel_unix.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from langsel_unix.c:114:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o maps.o maps.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from maps.c:81:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
gcc -O2 -fno-strength-reduce -fno-strict-aliasing -I/usr/include -I/usr/include -Dlinux -D__amd64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib64/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o x11win.o x11win.c
In file included from /usr/include/bits/libc-header-start.h:33,
from /usr/include/stdlib.h:25,
from x11win.c:232:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
# warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
^~~~~~~
rm -f rasmol
gcc -o rasmol -O2 -fno-strength-reduce -fno-strict-aliasing -L/usr/lib64 -L/usr/lib rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o x11win.o -lm -lXi -lXext -lX11 -lcbf -lCQRlib -lCVector -lCNearTree -lgfortran
make: Leaving directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src'
+ mv rasmol rasmol-32bpp
+ popd
~/RPM/BUILD/RasMol-2.7.5.2
+ exit 0
Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.63239
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ /bin/chmod -Rf u+rwX -- /usr/src/tmp/RasMol-buildroot
+ :
+ /bin/rm -rf -- /usr/src/tmp/RasMol-buildroot
+ PATH=/usr/libexec/rpm-build:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games
+ cd RasMol-2.7.5.2
+ find -type f -name .DS_Store -execdir rm '{}' +
+ install -pDm755 /usr/src/RPM/SOURCES/rasmol.sh /usr/src/tmp/RasMol-buildroot/usr/bin/rasmol
+ install -pm755 src/rasmol-8bpp /usr/src/tmp/RasMol-buildroot/usr/bin/rasmol-8bpp
+ install -pm755 src/rasmol-16bpp /usr/src/tmp/RasMol-buildroot/usr/bin/rasmol-16bpp
+ install -pm755 src/rasmol-32bpp /usr/src/tmp/RasMol-buildroot/usr/bin/rasmol-32bpp
+ mkdir -p /usr/src/tmp/RasMol-buildroot/usr/share/RasMol /usr/src/tmp/RasMol-buildroot/usr/share/man/man1/
+ install -pm644 doc/rasmol.1.gz /usr/src/tmp/RasMol-buildroot/usr/share/man/man1/rasmol.1.gz
+ install -pm644 doc/rasmol.hlp /usr/src/tmp/RasMol-buildroot/usr/share/RasMol/rasmol.hlp
+ install -pm644 doc/rasmol.html /usr/src/tmp/RasMol-buildroot/usr/share/RasMol/rasmol.html
+ pushd doc
~/RPM/BUILD/RasMol-2.7.5.2/doc ~/RPM/BUILD/RasMol-2.7.5.2
+ rm rasmol.hlp rasmol.html rasmol.1.gz
+ mkdir doc
+ install -pm644 INSTALL.html NOTICE.html README.html esrasmol27.html esrasmol2721.html index.html manualA4.pdf.gz manualUS.pdf.gz refcardA4.pdf.gz refcardUS.pdf.gz manualA4.ps.gz manualUS.ps.gz refcardA4.ps.gz refcardUS.ps.gz manualA4.rtf.gz manualUS.rtf.gz raswin.rtf.gz refcardA4.rtf.gz refcardUS.rtf.gz rasmol.doc.gz doc/
+ mkdir examples
+ popd
~/RPM/BUILD/RasMol-2.7.5.2
+ mv data/1crn.pdb data/1gpd.pdb.gz data/1ldb.pdb.gz data/1ldm.pdb.gz data/3cro.pdb data/4hir.ent.gz data/4ins.CIF data/7lyz.pdb data/IUCR9800028.cif data/RSML_fixup.csh data/asprin.alc data/pdb2mcg.ent doc/examples/
+ install -pDm644 /usr/src/RPM/SOURCES/rasmol.xpm /usr/src/tmp/RasMol-buildroot/usr/share/icons/hicolor/32x32/apps/rasmol.xpm
+ install -pDm644 /usr/src/RPM/SOURCES/rasmol_16x14.png /usr/src/tmp/RasMol-buildroot/usr/share/icons/hicolor/16x16/apps/rasmol.png
+ install -pDm644 /usr/src/RPM/SOURCES/rasmol_32x29.png /usr/src/tmp/RasMol-buildroot/usr/share/icons/hicolor/32x32/apps/rasmol.png
+ install -pDm644 /usr/src/RPM/SOURCES/rasmol_64x58.png /usr/src/tmp/RasMol-buildroot/usr/share/icons/hicolor/64x64/apps/rasmol.png
+ install -pDm644 /usr/src/RPM/SOURCES/rasmol.desktop /usr/src/tmp/RasMol-buildroot/usr/share/applications/RasMol.desktop
+ /usr/lib/rpm/brp-alt
Cleaning files in /usr/src/tmp/RasMol-buildroot (auto)
Verifying and fixing files in /usr/src/tmp/RasMol-buildroot (binconfig,pkgconfig,libtool,desktop,gnuconfig)
Checking contents of files in /usr/src/tmp/RasMol-buildroot/ (default)
Compressing files in /usr/src/tmp/RasMol-buildroot (auto)
056-debuginfo.brp: WARNING: debuginfo without debug sources.
Verifying ELF objects in /usr/src/tmp/RasMol-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal)
Hardlinking identical .pyc and .pyo files
Processing files: RasMol-2.7.5.2-alt4
Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.88004
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd RasMol-2.7.5.2
+ DOCDIR=/usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2
+ export DOCDIR
+ rm -rf /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2
+ /bin/mkdir -p /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2
+ cp -prL doc/ /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2
+ chmod -R go-w /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2
+ chmod -R a+rX /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2
+ cp -prL NOTICE PROJECTS RASLIC README.html README.shtml README.txt INSTALL INSTALL.html TODO.html TODO.txt ChangeLog ChangeLog.html ChangeLog.txt history.html /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2
+ chmod -R go-w /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2
+ chmod -R a+rX /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2
+ exit 0
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.fYtk6T
find-provides: running scripts (debuginfo,lib,pam,perl,pkgconfig,python,shell)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.GML9s7
find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services)
Provides: rasmol = 2.7.5.2-alt4
Requires: fonts-bitmap-75dpi, xdpyinfo, /bin/sh, /lib64/ld-linux-x86-64.so.2, libCNearTree.so.7()(64bit) >= set:jfy8eX61ZJ5rZ4xDtOoY3Ofm, libCQRlib.so.2()(64bit) >= set:jhBWnjL0, libCVector-1.0.3.so.2()(64bit) >= set:hfsOoCd, libX11.so.6()(64bit) >= set:ohc6fbkxsesVSZD9TAWJZxFUMYKZF7XZFHoAwZoYIZ2TYjO5aoG8X4Ct9JQyRnIXmV2F0aHbK2ZEIMkiMh7yzkXHE6SFl6Ha4Znpd3lnVtPcXGZBdges21HaRZJR0gURRPSLYLM70RcAA80Vgr3LUciiZbdtHCjMHh3JmZsZmA0wfU8Z8CaFM9ckOPvlJQeQ8HE5AmdIcwyk5PhmNA2U1e, libXext.so.6()(64bit) >= set:li6tHmY7qME5J7, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.15)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libc.so.6(GLIBC_2.7)(64bit), libcbf.so.0()(64bit) >= set:nhij0GYBa6O0x4WIjboz5OU4ATPkFBqBcbzYg8P0ecxUzu3yNivD0dJUmrTQFZ7ZKL0g0Njm3mBpemz9qh1jta3BdIxPLMksDf0UwsKp15JkFisAQRQfEn, libm.so.6(GLIBC_2.2.5)(64bit), rtld(GNU_HASH)
Requires(rpmlib): rpmlib(SetVersions)
Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.RyU7Yv
Creating RasMol-debuginfo package
Processing files: RasMol-debuginfo-2.7.5.2-alt4
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.idB6GX
find-provides: running scripts (debuginfo)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.t92Lzs
find-requires: running scripts (debuginfo)
Requires: RasMol = 2.7.5.2-alt4, /usr/lib/debug/lib64/ld-linux-x86-64.so.2.debug, debug64(libCNearTree.so.7), debug64(libCQRlib.so.2), debug64(libCVector-1.0.3.so.2), debug64(libX11.so.6), debug64(libXext.so.6), debug64(libc.so.6), debug64(libcbf.so.0), debug64(libm.so.6)
Adding to RasMol-debuginfo a strict dependency on RasMol
Wrote: /usr/src/RPM/RPMS/x86_64/RasMol-2.7.5.2-alt4.x86_64.rpm (w2T8.xzdio)
Wrote: /usr/src/RPM/RPMS/x86_64/RasMol-debuginfo-2.7.5.2-alt4.x86_64.rpm (w2.lzdio)
53.27user 3.72system 1:03.21elapsed 90%CPU (0avgtext+0avgdata 112872maxresident)k
0inputs+0outputs (0major+1213594minor)pagefaults 0swaps
3.19user 1.61system 1:17.39elapsed 6%CPU (0avgtext+0avgdata 120320maxresident)k
2416inputs+0outputs (34290major+166362minor)pagefaults 0swaps
--- RasMol-2.7.5.2-alt4.x86_64.rpm.repo 2019-02-02 13:49:50.000000000 +0000
+++ RasMol-2.7.5.2-alt4.x86_64.rpm.hasher 2023-02-12 09:09:30.640650042 +0000
@@ -147,5 +147,5 @@
File: /usr/bin/rasmol 100755 root:root 0a6fbafc8996fc169efab77b707322a4
-File: /usr/bin/rasmol-16bpp 100755 root:root a8df4e82d1fa853c6f96481fc8a47662
-File: /usr/bin/rasmol-32bpp 100755 root:root e2109546d605dabd74cc8e2b0f8b98a0
-File: /usr/bin/rasmol-8bpp 100755 root:root 9a854f2c121b51da274cf63809451f96
+File: /usr/bin/rasmol-16bpp 100755 root:root 806354c4f2b528c07e32649adc327dd2
+File: /usr/bin/rasmol-32bpp 100755 root:root 428b62373c192cef54aa618e8c05cef2
+File: /usr/bin/rasmol-8bpp 100755 root:root 16748e10cd14904c59fdc15867d317c7
File: /usr/share/RasMol 40755 root:root
@@ -269,2 +269,2 @@
File: /usr/share/man/man1/rasmol.1.xz 100644 root:root 9b73f54ed473f9c627909b8ca5350c71
-RPMIdentity: 4b4789edf292c0c71e3b9deff2670a1685e9f7b78d6ff05b52cac969564cde54a5378933c1f08410bf22fa18bae37c7ba8f23141cd794f1498a7d30444768a57
+RPMIdentity: dc43fbf3d270d3d8465f3c00088dfad1e623ffa09e602527121eb177be8ba3b9dd08a9f76dbb88c98435a1861c0cde33ebe4cbccf825b2bd3c9bc35b43c8e830
--- RasMol-debuginfo-2.7.5.2-alt4.x86_64.rpm.repo 2019-02-02 13:49:50.000000000 +0000
+++ RasMol-debuginfo-2.7.5.2-alt4.x86_64.rpm.hasher 2023-02-12 09:09:30.875648822 +0000
@@ -1,10 +1,10 @@
-/usr/lib/debug/.build-id/6d 40755 root:root
-/usr/lib/debug/.build-id/6d/fde76fd8cc2319aa0a2144fe311838218afe81 120777 root:root ../../../../bin/rasmol-32bpp
-/usr/lib/debug/.build-id/6d/fde76fd8cc2319aa0a2144fe311838218afe81.debug 120777 root:root ../../usr/bin/rasmol-32bpp.debug
-/usr/lib/debug/.build-id/ab 40755 root:root
-/usr/lib/debug/.build-id/ab/66463a654657423e9592a3e2e6cae3c958124f 120777 root:root ../../../../bin/rasmol-8bpp
-/usr/lib/debug/.build-id/ab/66463a654657423e9592a3e2e6cae3c958124f.debug 120777 root:root ../../usr/bin/rasmol-8bpp.debug
-/usr/lib/debug/.build-id/d2 40755 root:root
-/usr/lib/debug/.build-id/d2/7383017f227acd509fbaef677877a691e7b13b 120777 root:root ../../../../bin/rasmol-16bpp
-/usr/lib/debug/.build-id/d2/7383017f227acd509fbaef677877a691e7b13b.debug 120777 root:root ../../usr/bin/rasmol-16bpp.debug
+/usr/lib/debug/.build-id/6c 40755 root:root
+/usr/lib/debug/.build-id/6c/328878179a6f2e49668da79171be8969cb5690 120777 root:root ../../../../bin/rasmol-32bpp
+/usr/lib/debug/.build-id/6c/328878179a6f2e49668da79171be8969cb5690.debug 120777 root:root ../../usr/bin/rasmol-32bpp.debug
+/usr/lib/debug/.build-id/91 40755 root:root
+/usr/lib/debug/.build-id/91/30993fe9db916ac33ea8e15dfa4955f349cad4 120777 root:root ../../../../bin/rasmol-8bpp
+/usr/lib/debug/.build-id/91/30993fe9db916ac33ea8e15dfa4955f349cad4.debug 120777 root:root ../../usr/bin/rasmol-8bpp.debug
+/usr/lib/debug/.build-id/c8 40755 root:root
+/usr/lib/debug/.build-id/c8/d4f760acb51872f010a870cbb922af412652ee 120777 root:root ../../../../bin/rasmol-16bpp
+/usr/lib/debug/.build-id/c8/d4f760acb51872f010a870cbb922af412652ee.debug 120777 root:root ../../usr/bin/rasmol-16bpp.debug
/usr/lib/debug/usr/bin/rasmol-16bpp.debug 100644 root:root
@@ -24,14 +24,14 @@
Provides: RasMol-debuginfo = 2.7.5.2-alt4:sisyphus+220437.200.1.1
-File: /usr/lib/debug/.build-id/6d 40755 root:root
-File: /usr/lib/debug/.build-id/6d/fde76fd8cc2319aa0a2144fe311838218afe81 120777 root:root ../../../../bin/rasmol-32bpp
-File: /usr/lib/debug/.build-id/6d/fde76fd8cc2319aa0a2144fe311838218afe81.debug 120777 root:root ../../usr/bin/rasmol-32bpp.debug
-File: /usr/lib/debug/.build-id/ab 40755 root:root
-File: /usr/lib/debug/.build-id/ab/66463a654657423e9592a3e2e6cae3c958124f 120777 root:root ../../../../bin/rasmol-8bpp
-File: /usr/lib/debug/.build-id/ab/66463a654657423e9592a3e2e6cae3c958124f.debug 120777 root:root ../../usr/bin/rasmol-8bpp.debug
-File: /usr/lib/debug/.build-id/d2 40755 root:root
-File: /usr/lib/debug/.build-id/d2/7383017f227acd509fbaef677877a691e7b13b 120777 root:root ../../../../bin/rasmol-16bpp
-File: /usr/lib/debug/.build-id/d2/7383017f227acd509fbaef677877a691e7b13b.debug 120777 root:root ../../usr/bin/rasmol-16bpp.debug
-File: /usr/lib/debug/usr/bin/rasmol-16bpp.debug 100644 root:root c1b9541daf5d731aeba69f85e3a64167
-File: /usr/lib/debug/usr/bin/rasmol-32bpp.debug 100644 root:root 3d311d1b716b405d45a0f4f0df568ad1
-File: /usr/lib/debug/usr/bin/rasmol-8bpp.debug 100644 root:root 377974b2865fce416854e36fef800d43
-RPMIdentity: d3bddbdd78ba0ec377bf6d5fb482eaa52fe87f1de9b3975e69d06e2c4771e247741858faf5235e1372330e1f249fa51ecf7a8335c84fc265a01d815835d5cc9a
+File: /usr/lib/debug/.build-id/6c 40755 root:root
+File: /usr/lib/debug/.build-id/6c/328878179a6f2e49668da79171be8969cb5690 120777 root:root ../../../../bin/rasmol-32bpp
+File: /usr/lib/debug/.build-id/6c/328878179a6f2e49668da79171be8969cb5690.debug 120777 root:root ../../usr/bin/rasmol-32bpp.debug
+File: /usr/lib/debug/.build-id/91 40755 root:root
+File: /usr/lib/debug/.build-id/91/30993fe9db916ac33ea8e15dfa4955f349cad4 120777 root:root ../../../../bin/rasmol-8bpp
+File: /usr/lib/debug/.build-id/91/30993fe9db916ac33ea8e15dfa4955f349cad4.debug 120777 root:root ../../usr/bin/rasmol-8bpp.debug
+File: /usr/lib/debug/.build-id/c8 40755 root:root
+File: /usr/lib/debug/.build-id/c8/d4f760acb51872f010a870cbb922af412652ee 120777 root:root ../../../../bin/rasmol-16bpp
+File: /usr/lib/debug/.build-id/c8/d4f760acb51872f010a870cbb922af412652ee.debug 120777 root:root ../../usr/bin/rasmol-16bpp.debug
+File: /usr/lib/debug/usr/bin/rasmol-16bpp.debug 100644 root:root 03cdb9807638fa791ba11febec1c8873
+File: /usr/lib/debug/usr/bin/rasmol-32bpp.debug 100644 root:root 77f95e982a4a00db9cdad2da9ccca3b1
+File: /usr/lib/debug/usr/bin/rasmol-8bpp.debug 100644 root:root d15e4a12db4649bf7f8113652ccae7c9
+RPMIdentity: 8220c8c39986034f628e409c8da9621a62af9cf509aca2716cc413c6584d167aabc8590271e98112c6929926edffe2107d2f92f26bde4e8f76ee68d1b8b205fc