<86>Nov 15 03:28:07 userdel[1814119]: delete user 'rooter'
<86>Nov 15 03:28:07 userdel[1814119]: removed group 'rooter' owned by 'rooter'
<86>Nov 15 03:28:07 userdel[1814119]: removed shadow group 'rooter' owned by 'rooter'
<86>Nov 15 03:28:07 groupadd[1814124]: group added to /etc/group: name=rooter, GID=525
<86>Nov 15 03:28:07 groupadd[1814124]: group added to /etc/gshadow: name=rooter
<86>Nov 15 03:28:07 groupadd[1814124]: new group: name=rooter, GID=525
<86>Nov 15 03:28:07 useradd[1814128]: new user: name=rooter, UID=525, GID=525, home=/root, shell=/bin/bash
<86>Nov 15 03:28:07 userdel[1814135]: delete user 'builder'
<86>Nov 15 03:28:07 userdel[1814135]: removed group 'builder' owned by 'builder'
<86>Nov 15 03:28:07 userdel[1814135]: removed shadow group 'builder' owned by 'builder'
<86>Nov 15 03:28:07 groupadd[1814140]: group added to /etc/group: name=builder, GID=526
<86>Nov 15 03:28:07 groupadd[1814140]: group added to /etc/gshadow: name=builder
<86>Nov 15 03:28:07 groupadd[1814140]: new group: name=builder, GID=526
<86>Nov 15 03:28:07 useradd[1814144]: new user: name=builder, UID=526, GID=526, home=/usr/src, shell=/bin/bash
warning: Macro %cmake_insource not found
<13>Nov 15 03:28:11 rpmi: libexpat-2.2.10-alt1 p9+261554.100.1.1 1605103332 installed
<13>Nov 15 03:28:11 rpmi: libpng16-1.6.36-alt1 sisyphus+219478.100.1.1 1547633315 installed
<13>Nov 15 03:28:11 rpmi: xorg-proto-devel-2018.4-alt3 1527685079 installed
<13>Nov 15 03:28:11 rpmi: libjpeg-2:2.0.2-alt1 sisyphus+226996.100.1.1 1554902884 installed
<13>Nov 15 03:28:11 rpmi: libogg-1.3.4-alt1 p9+249556.100.1.1 1586300644 installed
<13>Nov 15 03:28:11 rpmi: libglvnd-7:1.3.1-alt0.p9 p9+251991.160.19.1 1590834868 installed
<13>Nov 15 03:28:11 rpmi: libwayland-client-1.17.0-alt1 sisyphus+225894.100.1.1 1553872803 installed
<13>Nov 15 03:28:11 rpmi: libcom_err-1.44.6-alt1 sisyphus+224154.100.1.1 1552091653 installed
<13>Nov 15 03:28:11 rpmi: zlib-devel-1.2.11-alt1 sisyphus+221902.6000.4.1 1550600768 installed
<13>Nov 15 03:28:11 rpmi: libXau-1.0.9-alt1 sisyphus+223149.200.2.1 1551268156 installed
<13>Nov 15 03:28:11 rpmi: libwayland-server-1.17.0-alt1 sisyphus+225894.100.1.1 1553872803 installed
<13>Nov 15 03:28:11 rpmi: libgraphite2-1.3.13-alt2 sisyphus+226799.100.1.1 1554648233 installed
<13>Nov 15 03:28:11 rpmi: libharfbuzz-2.6.2-alt1 p9+238790.200.1.1 1570435797 installed
<13>Nov 15 03:28:11 rpmi: libfreetype-2.10.1-alt1.1.p9.1 p9+260179.200.3.1 1603971391 installed
<13>Nov 15 03:28:11 rpmi: fontconfig-2.13.1-alt1 p9+247340.200.3.1 1583400482 installed
Updating fonts cache: <29>Nov 15 03:28:12 fontconfig: Updating fonts cache: succeeded
[ DONE ]
<13>Nov 15 03:28:12 rpmi: libidn2-2.2.0-alt1 p9+229971.100.2.1 1558696275 installed
<13>Nov 15 03:28:12 rpmi: libgdbm-1.8.3-alt10 1454943313 installed
<13>Nov 15 03:28:12 rpmi: libgraphite2-devel-1.3.13-alt2 sisyphus+226799.100.1.1 1554648233 installed
<13>Nov 15 03:28:12 rpmi: libXau-devel-1.0.9-alt1 sisyphus+223149.200.2.1 1551268156 installed
<13>Nov 15 03:28:12 rpmi: libpng-devel-1.6.36-alt1 sisyphus+219478.100.1.1 1547633315 installed
<13>Nov 15 03:28:12 rpmi: libe2fs-1.44.6-alt1 sisyphus+224154.100.1.1 1552091653 installed
<13>Nov 15 03:28:12 rpmi: libwayland-egl-4:18.1.0-alt1 sisyphus+225894.100.1.1 1553872803 installed
<13>Nov 15 03:28:12 rpmi: libOpenGL-7:1.3.1-alt0.p9 p9+251991.160.19.1 1590834868 installed
<13>Nov 15 03:28:12 rpmi: libflac8-1.3.3-alt1 p9+249557.100.1.1 1586301784 installed
<13>Nov 15 03:28:12 rpmi: libvorbis-1.3.6-alt2 sisyphus+220072.200.2.2 1548744467 installed
<13>Nov 15 03:28:12 rpmi: libjasper-2.0.22-alt1 p9+259398.100.5.1 1602695042 installed
<13>Nov 15 03:28:13 rpmi: libgtk+2-locales-2.24.32-alt3 sisyphus+227306.100.1.3 1555646039 installed
<13>Nov 15 03:28:13 rpmi: liborc-0.4.30.1-alt0.2 p9+238791.100.1.1 1570624345 installed
<13>Nov 15 03:28:13 rpmi: libgudev-1:233-alt1 p9+235498.500.2.1 1565021350 installed
<13>Nov 15 03:28:13 rpmi: libfribidi-1.0.7-alt1 p9+238309.200.1.1 1569787041 installed
<13>Nov 15 03:28:13 rpmi: libdatrie-0.2.9-alt1_6 1511686677 installed
<13>Nov 15 03:28:13 rpmi: libthai-0.1.28-alt1_1 sisyphus+226107.100.1.1 1554123079 installed
<13>Nov 15 03:28:13 rpmi: libpixman-3:0.38.4-alt1 sisyphus+228006.100.1.1 1556013486 installed
<13>Nov 15 03:28:13 rpmi: libatk-locales-2.32.0-alt1 sisyphus+225059.600.3.2 1552845198 installed
<13>Nov 15 03:28:13 rpmi: libatk-2.32.0-alt1 sisyphus+225059.600.3.2 1552845198 installed
<13>Nov 15 03:28:13 rpmi: libgsm-1.0.17-alt1 1523356157 installed
<13>Nov 15 03:28:13 rpmi: libsndfile-1.0.28-alt2 sisyphus.212728.100 1536333060 installed
<13>Nov 15 03:28:13 rpmi: liblz4-1:1.9.2-alt1 p9+238696.500.1.1 1570228072 installed
<13>Nov 15 03:28:13 rpmi: libgpg-error-1.36-alt1 sisyphus+225621.300.1.1 1553521088 installed
<13>Nov 15 03:28:13 rpmi: libgcrypt20-1.8.5-alt3 p9+239665.100.7.1 1586364671 installed
<13>Nov 15 03:28:13 rpmi: libsystemd-1:243.9-alt1 p9+258476.300.4.1 1601997124 installed
<13>Nov 15 03:28:13 rpmi: libdbus-1.12.16-alt2 p9+240607.100.1.1 1573553670 installed
<13>Nov 15 03:28:13 rpmi: libavahi-0.8-alt1 p9+258828.100.4.1 1601912047 installed
<13>Nov 15 03:28:13 rpmi: libcups-2.3.1-alt1 p9+247593.200.5.1 1585155224 installed
<13>Nov 15 03:28:13 rpmi: libasyncns-0.8-alt2.qa1 1365949819 installed
<13>Nov 15 03:28:13 rpmi: libalsa-1:1.1.9-alt2 sisyphus+229323.100.1.1 1557826762 installed
<13>Nov 15 03:28:13 rpmi: libICE-1.0.9-alt1 1409902719 installed
<13>Nov 15 03:28:13 rpmi: libSM-1.2.3-alt1 sisyphus+226734.100.2.1 1554586157 installed
<13>Nov 15 03:28:13 rpmi: libxshmfence-1.3-alt1 sisyphus+223149.1000.2.1 1551268594 installed
<13>Nov 15 03:28:13 rpmi: libX11-locales-3:1.6.7-alt2 p9+258208.100.1.1 1600333167 installed
<13>Nov 15 03:28:13 rpmi: libXdmcp-1.1.3-alt1 sisyphus+225206.600.1.2 1552949347 installed
<13>Nov 15 03:28:13 rpmi: libxcb-1.13.1-alt1 sisyphus+226527.100.2.2 1554593799 installed
<13>Nov 15 03:28:13 rpmi: libX11-3:1.6.7-alt2 p9+258208.100.1.1 1600333167 installed
<13>Nov 15 03:28:13 rpmi: libXext-1.3.4-alt1 sisyphus+225206.700.1.2 1552949422 installed
<13>Nov 15 03:28:13 rpmi: libXrender-0.9.8-alt1 1371312110 installed
<13>Nov 15 03:28:13 rpmi: libXfixes-5.0.3-alt1 sisyphus+226736.100.2.2 1554614842 installed
<13>Nov 15 03:28:13 rpmi: libXrandr-1.5.2-alt1 sisyphus+225206.1300.1.2 1552949698 installed
<13>Nov 15 03:28:13 rpmi: libXinerama-1.1.4-alt1 sisyphus+223149.300.2.1 1551268223 installed
<13>Nov 15 03:28:13 rpmi: libXdamage-1.1.5-alt1 sisyphus+225206.500.1.2 1552949282 installed
<13>Nov 15 03:28:14 rpmi: libxcb-devel-1.13.1-alt1 sisyphus+226527.100.2.2 1554593799 installed
<13>Nov 15 03:28:14 rpmi: libX11-devel-3:1.6.7-alt2 p9+258208.100.1.1 1600333167 installed
<13>Nov 15 03:28:14 rpmi: libXext-devel-1.3.4-alt1 sisyphus+225206.700.1.2 1552949422 installed
<13>Nov 15 03:28:14 rpmi: libXrender-devel-0.9.8-alt1 1371312110 installed
<13>Nov 15 03:28:14 rpmi: libXcursor-1.2.0-alt1 sisyphus+225206.400.1.2 1552949214 installed
<13>Nov 15 03:28:14 rpmi: libXft-2.3.3-alt1 sisyphus+225206.1000.3.2 1552987714 installed
<13>Nov 15 03:28:14 rpmi: libXxf86vm-1.1.4-alt2 1527672159 installed
<13>Nov 15 03:28:14 rpmi: libXi-1.7.9-alt2 sisyphus+226377.100.1.2 1554260258 installed
<13>Nov 15 03:28:14 rpmi: libXcomposite-0.4.5-alt1 sisyphus+225206.300.1.2 1552949136 installed
<13>Nov 15 03:28:14 rpmi: libpulseaudio-13.0-alt3 p9+254091.100.3.1 1593708010 installed
<13>Nov 15 03:28:14 rpmi: libSDL-1.2.14-alt8 p9+232634.100.1.1 1560964523 installed
<13>Nov 15 03:28:14 rpmi: libpciaccess-1:0.14-alt1 1528969624 installed
<13>Nov 15 03:28:14 rpmi: libdrm-1:2.4.102-alt1 p9+252863.100.1.1 1591372623 installed
<13>Nov 15 03:28:14 rpmi: libGLX-mesa-4:20.1.8-alt1 p9+258208.300.1.1 1600333749 installed
<13>Nov 15 03:28:14 rpmi: libgbm-4:20.1.8-alt1 p9+258208.300.1.1 1600333749 installed
<13>Nov 15 03:28:14 rpmi: libEGL-mesa-4:20.1.8-alt1 p9+258208.300.1.1 1600333749 installed
<13>Nov 15 03:28:14 rpmi: libEGL-7:1.3.1-alt0.p9 p9+251991.160.19.1 1590834868 installed
<13>Nov 15 03:28:14 rpmi: libGLX-7:1.3.1-alt0.p9 p9+251991.160.19.1 1590834868 installed
<13>Nov 15 03:28:14 rpmi: libGL-7:1.3.1-alt0.p9 p9+251991.160.19.1 1590834868 installed
<13>Nov 15 03:28:14 rpmi: libglvnd-devel-7:1.3.1-alt0.p9 p9+251991.160.19.1 1590834868 installed
<13>Nov 15 03:28:15 rpmi: libcairo-1:1.16.0-alt1 sisyphus+226534.100.2.3 1554515520 installed
<13>Nov 15 03:28:15 rpmi: libpango-1.44.6-alt1 p9+237353.700.2.2 1568373865 installed
<13>Nov 15 03:28:15 rpmi: libEGL-devel-4:20.1.8-alt1 p9+258208.300.1.1 1600333749 installed
<13>Nov 15 03:28:15 rpmi: libGL-devel-4:20.1.8-alt1 p9+258208.300.1.1 1600333749 installed
<13>Nov 15 03:28:15 rpmi: icon-theme-hicolor-0.17-alt2 p9+248347.100.1.1 1584981172 installed
<13>Nov 15 03:28:15 rpmi: libwebp7-1.0.3-alt1 p9+234901.200.1.1 1563552213 installed
<13>Nov 15 03:28:15 rpmi: libjbig-2.1-alt1 1401380921 installed
<13>Nov 15 03:28:15 rpmi: libtiff5-4.0.10.0.57.f9fc01c3-alt1 sisyphus+226958.100.1.1 1554850937 installed
<13>Nov 15 03:28:15 rpmi: shared-mime-info-1.13.1-alt1 p9+238204.100.1.1 1569496447 installed
<13>Nov 15 03:28:15 rpmi: libgdk-pixbuf-locales-2.38.2-alt1 p9+237353.1000.2.2 1568374008 installed
<13>Nov 15 03:28:15 rpmi: gsettings-desktop-schemas-data-3.32.0-alt1 sisyphus+225059.300.3.2 1552843929 installed
<13>Nov 15 03:28:15 rpmi: libgio-2.60.7-alt1 p9+237353.100.2.2 1568372980 installed
<13>Nov 15 03:28:15 rpmi: gsettings-desktop-schemas-3.32.0-alt1 sisyphus+225059.300.3.2 1552843929 installed
<13>Nov 15 03:28:15 rpmi: libgdk-pixbuf-2.38.2-alt1 p9+237353.1000.2.2 1568374008 installed
<13>Nov 15 03:28:15 rpmi: libgstreamer1.0-1.16.1-alt1 p9+238791.200.1.1 1570624682 installed
<13>Nov 15 03:28:15 rpmi: libgst-plugins1.0-1.16.1-alt1 p9+238791.300.1.1 1570624941 installed
<13>Nov 15 03:28:15 rpmi: gtk-update-icon-cache-3.24.11-alt1 p9+237353.1200.2.2 1568374373 installed
<13>Nov 15 03:28:15 rpmi: libgtk+2-2.24.32-alt3 sisyphus+227306.100.1.3 1555646039 installed
<13>Nov 15 03:28:15 rpmi: wxGTK-2:2.8.12-alt1.svn20131012.5 1504027527 installed
<13>Nov 15 03:28:15 rpmi: libwxGTK-2:2.8.12-alt1.svn20131012.5 1504027527 installed
<13>Nov 15 03:28:15 rpmi: gcc-c++-common-1.4.23-alt1 sisyphus+221902.2500.4.1 1550596716 installed
<13>Nov 15 03:28:16 rpmi: libstdc++8-devel-8.4.1-alt0.p9.1 p9+247559.100.2.1 1585587756 installed
<13>Nov 15 03:28:17 rpmi: gcc8-c++-8.4.1-alt0.p9.1 p9+247559.100.2.1 1585587756 installed
<13>Nov 15 03:28:18 rpmi: libicu64-1:6.4.2-alt2 p9+247371.14540.149.1 1590835182 installed
<13>Nov 15 03:28:18 rpmi: libharfbuzz-icu-2.6.2-alt1 p9+238790.200.1.1 1570435797 installed
<13>Nov 15 03:28:18 rpmi: libicu65-1:6.5.1-alt1 p9+247371.14560.149.1 1590835589 installed
<13>Nov 15 03:28:18 rpmi: icu-utils-1:6.5.1-alt1 p9+247371.14560.149.1 1590835589 installed
<13>Nov 15 03:28:18 rpmi: libicu-devel-1:6.5.1-alt1 p9+247371.14560.149.1 1590835589 installed
<13>Nov 15 03:28:19 rpmi: xml-utils-1:2.9.10-alt4 p9+261133.100.1.1 1604676294 installed
<13>Nov 15 03:28:19 rpmi: rpm-build-gir-0.7.3-alt2 p9+234356.40.2.1 1562933848 installed
<13>Nov 15 03:28:19 rpmi: rpm-macros-cmake-3.16.3-alt1 p9+245760.100.3.1 1582902649 installed
<13>Nov 15 03:28:19 rpmi: rmt-0.4b44-alt2 p9+258359.100.2.1 1601048372 installed
<13>Nov 15 03:28:19 rpmi: dump-0.4b44-alt2 p9+258359.100.2.1 1601048372 installed
<13>Nov 15 03:28:19 rpmi: cmake-modules-3.16.3-alt1 p9+245760.100.3.1 1582902649 installed
<13>Nov 15 03:28:19 rpmi: libuv-1.40.0-alt1 p9+260562.40.2.1 1604013254 installed
<13>Nov 15 03:28:19 rpmi: librhash-1.3.5-alt2 1505156277 installed
<13>Nov 15 03:28:19 rpmi: libjsoncpp19-1.8.4-alt2.S1 1518769512 installed
<13>Nov 15 03:28:19 rpmi: publicsuffix-list-dafsa-20200909-alt1 p9+257853.100.1.1 1599769437 installed
<13>Nov 15 03:28:19 rpmi: libpsl-0.21.1-alt1 p9+255207.100.1.1 1595355041 installed
<13>Nov 15 03:28:19 rpmi: libnghttp2-1.41.0-alt1 p9+256449.100.1.1 1597829543 installed
<13>Nov 15 03:28:19 rpmi: libbrotlicommon-1.0.7-alt1 sisyphus+226738.100.2.1 1554554565 installed
<13>Nov 15 03:28:19 rpmi: libbrotlidec-1.0.7-alt1 sisyphus+226738.100.2.1 1554554565 installed
<13>Nov 15 03:28:19 rpmi: python-modules-curses-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:19 rpmi: libtinfo-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686221 installed
<13>Nov 15 03:28:19 rpmi: libncurses-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686221 installed
<13>Nov 15 03:28:19 rpmi: libverto-0.3.0-alt1_7 sisyphus+225932.100.1.1 1553994917 installed
<13>Nov 15 03:28:19 rpmi: libkeyutils-1.6-alt2 sisyphus+226520.100.2.1 1554512088 installed
<13>Nov 15 03:28:19 rpmi: libp11-kit-0.23.15-alt2 p9+254920.2400.19.1 1601385869 installed
<13>Nov 15 03:28:19 rpmi: libtasn1-4.14-alt1 p9+235792.100.2.1 1565425233 installed
<13>Nov 15 03:28:19 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed
<13>Nov 15 03:28:19 rpmi: alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed
<13>Nov 15 03:28:19 rpmi: ca-certificates-2020.06.29-alt1 p9+258899.100.3.1 1601998604 installed
<13>Nov 15 03:28:19 rpmi: ca-trust-0.1.2-alt1 p9+233349.100.1.1 1561655062 installed
<13>Nov 15 03:28:19 rpmi: p11-kit-trust-0.23.15-alt2 p9+254920.2400.19.1 1601385869 installed
<13>Nov 15 03:28:19 rpmi: libcrypto1.1-1.1.1g-alt1 p9+250580.100.5.1 1588175208 installed
<13>Nov 15 03:28:19 rpmi: libssl1.1-1.1.1g-alt1 p9+250580.100.5.1 1588175208 installed
<86>Nov 15 03:28:19 groupadd[1826447]: group added to /etc/group: name=_keytab, GID=499
<86>Nov 15 03:28:19 groupadd[1826447]: group added to /etc/gshadow: name=_keytab
<86>Nov 15 03:28:19 groupadd[1826447]: new group: name=_keytab, GID=499
<13>Nov 15 03:28:19 rpmi: libkrb5-1.17.1-alt1 p9+242852.100.2.1 1576572448 installed
<13>Nov 15 03:28:19 rpmi: libpython3-3.7.4-alt3 p9+249932.100.2.1 1587126956 installed
<13>Nov 15 03:28:19 rpmi: python3-3.7.4-alt3 p9+249932.100.2.1 1587126956 installed
<13>Nov 15 03:28:20 rpmi: python3-base-3.7.4-alt3 p9+249932.100.2.1 1587126956 installed
<13>Nov 15 03:28:20 rpmi: glib2-devel-2.60.7-alt1 p9+237353.100.2.2 1568372980 installed
<13>Nov 15 03:28:20 rpmi: libharfbuzz-devel-2.6.2-alt1 p9+238790.200.1.1 1570435797 installed
<13>Nov 15 03:28:20 rpmi: libfreetype-devel-2.10.1-alt1.1.p9.1 p9+260179.200.3.1 1603971391 installed
<13>Nov 15 03:28:20 rpmi: fontconfig-devel-2.13.1-alt1 p9+247340.200.3.1 1583400482 installed
<13>Nov 15 03:28:20 rpmi: libtirpc-1.0.3-alt1 1532008015 installed
<13>Nov 15 03:28:20 rpmi: libnsl2-1.1.0-alt1_1 1511548748 installed
<13>Nov 15 03:28:20 rpmi: python-modules-compiler-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:20 rpmi: python-modules-email-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:20 rpmi: python-modules-unittest-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:20 rpmi: python-modules-encodings-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-modules-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-modules-nis-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-modules-xml-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-modules-hotshot-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-modules-bsddb-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-modules-ctypes-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-modules-multiprocessing-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-modules-logging-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: python-modules-distutils-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: libnsl2-devel-1.1.0-alt1_1 1511548748 installed
<86>Nov 15 03:28:21 groupadd[1828385]: group added to /etc/group: name=sasl, GID=498
<86>Nov 15 03:28:21 groupadd[1828385]: group added to /etc/gshadow: name=sasl
<86>Nov 15 03:28:21 groupadd[1828385]: new group: name=sasl, GID=498
<13>Nov 15 03:28:21 rpmi: libsasl2-3-2.1.27-alt2.1 p9+256192.100.1.1 1597226707 installed
<13>Nov 15 03:28:21 rpmi: libldap-2.4.54-alt0.M90P.1 p9+260357.200.2.1 1603585219 installed
<13>Nov 15 03:28:21 rpmi: libcurl-7.71.0-alt1 p9+253931.100.3.1 1595484139 installed
<13>Nov 15 03:28:21 rpmi: libarchive13-3.4.3-alt1 p9+258567.100.2.1 1600968901 installed
<13>Nov 15 03:28:21 rpmi: cmake-3.16.3-alt1 p9+245760.100.3.1 1582902649 installed
<13>Nov 15 03:28:21 rpmi: python-dev-2.7.16-alt1.M90P.2 p9+260393.40.3.1 1604003646 installed
<13>Nov 15 03:28:21 rpmi: libcairo-devel-1:1.16.0-alt1 sisyphus+226534.100.2.3 1554515520 installed
<13>Nov 15 03:28:21 rpmi: gcc-c++-8-alt2 p9+246536.100.3.1 1582643803 installed
<13>Nov 15 03:28:21 rpmi: libwxGTK-devel-2:2.8.12-alt1.svn20131012.5 1504027527 installed
<13>Nov 15 03:28:21 rpmi: libxml2-devel-1:2.9.10-alt4 p9+261133.100.1.1 1604676294 installed
<13>Nov 15 03:28:21 rpmi: eigen2-2.0.17-alt2.S1 1492087697 installed
Building target platforms: x86_64
Building for target x86_64
Wrote: /usr/src/in/nosrpm/openbabel-2.4.1-alt4.nosrc.rpm
Installing openbabel-2.4.1-alt4.src.rpm
Building target platforms: x86_64
Building for target x86_64
Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.15102
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ rm -rf openbabel-2.4.1
+ echo 'Source #0 (openbabel-2.4.1.tar.gz):'
Source #0 (openbabel-2.4.1.tar.gz):
+ /bin/gzip -dc /usr/src/RPM/SOURCES/openbabel-2.4.1.tar.gz
+ /bin/tar -xf -
+ cd openbabel-2.4.1
+ /bin/chmod -c -Rf u+rwX,go-w .
+ echo 'Patch #1 (openbabel-2.4.1-upstream-gcc-version-1.patch):'
Patch #1 (openbabel-2.4.1-upstream-gcc-version-1.patch):
+ /usr/bin/patch -p1
patching file CMakeLists.txt
+ echo 'Patch #2 (openbabel-2.4.1-upstream-gcc-version-2.patch):'
Patch #2 (openbabel-2.4.1-upstream-gcc-version-2.patch):
+ /usr/bin/patch -p1
patching file CMakeLists.txt
Hunk #3 succeeded at 232 (offset -1 lines).
patching file cmake/modules/MacroEnsureVersion.cmake
+ echo 'Patch #3 (openbabel-2.4.1-narrowing-conversion.patch):'
Patch #3 (openbabel-2.4.1-narrowing-conversion.patch):
+ /usr/bin/patch -p1
patching file src/formats/pngformat.cpp
patching file src/formats/yasaraformat.cpp
+ echo PYTHON_BINDINGS:BOOL=ON
+ exit 0
Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.28804
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd openbabel-2.4.1
+ cmake . -DCMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_SKIP_INSTALL_RPATH:BOOL=yes '-DCMAKE_C_FLAGS:STRING=-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2' '-DCMAKE_CXX_FLAGS:STRING=-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2' '-DCMAKE_Fortran_FLAGS:STRING=-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2' -DCMAKE_INSTALL_PREFIX=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DLIB_DESTINATION=lib64
-- The C compiler identification is GNU 8.4.1
-- The CXX compiler identification is GNU 8.4.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at CMakeLists.txt:11 (cmake_policy):
The OLD behavior for policy CMP0005 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
CMake Deprecation Warning at CMakeLists.txt:13 (cmake_policy):
The OLD behavior for policy CMP0042 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
-- Using included inchi library.
-- Found LibXml2: /usr/lib64/libxml2.so (found version "2.9.10")
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11")
-- Found wxWidgets: -L/usr/lib64;-pthread;;;-L/usr/lib64;;;-lwx_baseu-2.8;-lwx_gtk2u_core-2.8;-lwx_gtk2u_adv-2.8 (found version "2.8.12")
-- Looking for conio.h
-- Looking for conio.h - not found
-- Looking for sys/time.h
-- Looking for sys/time.h - found
-- Looking for time.h
-- Looking for time.h - found
-- Looking for strings.h
-- Looking for strings.h - found
-- Looking for rpc/xdr.h
-- Looking for rpc/xdr.h - found
-- Looking for regex.h
-- Looking for regex.h - found
-- Looking for C++ include sstream
-- Looking for C++ include sstream - found
-- Looking for rint
-- Looking for rint - not found
-- Looking for snprintf
-- Looking for snprintf - found
-- Looking for sranddev
-- Looking for sranddev - not found
-- Looking for strcasecmp
-- Looking for strcasecmp - found
-- Looking for strncasecmp
-- Looking for strncasecmp - found
-- Looking for dlopen in dl
-- Looking for dlopen in dl - found
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of clock_t
-- Check size of clock_t - done
-- Performing Test SCANDIR_NEEDS_CONST
-- Performing Test SCANDIR_NEEDS_CONST - Failed
-- Performing Test HAVE_GCC_VISIBILITY
-- Performing Test HAVE_GCC_VISIBILITY - Success
-- Checking available shared pointer...
-- Performing Test HAVE_STD_SHARED_PTR
-- Performing Test HAVE_STD_SHARED_PTR - Success
-- Performing Test HAVE_STD_TR1_SHARED_PTR
-- Performing Test HAVE_STD_TR1_SHARED_PTR - Failed
-- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER
-- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER - Success
-- Use std::shared_ptr in memory
-- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0")
-- Found Eigen2: /usr/include/eigen2 (Required is at least version "2.0.0")
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2")
-- Checking for module 'cairo'
-- Found cairo, version 1.16.0
Package libpcre was not found in the pkg-config search path.
Perhaps you should add the directory containing `libpcre.pc'
to the PKG_CONFIG_PATH environment variable
Package 'libpcre', required by 'glib-2.0', not found
Package libpcre was not found in the pkg-config search path.
Perhaps you should add the directory containing `libpcre.pc'
to the PKG_CONFIG_PATH environment variable
Package 'libpcre', required by 'glib-2.0', not found
Package libpcre was not found in the pkg-config search path.
Perhaps you should add the directory containing `libpcre.pc'
to the PKG_CONFIG_PATH environment variable
Package 'libpcre', required by 'glib-2.0', not found
Package libpcre was not found in the pkg-config search path.
Perhaps you should add the directory containing `libpcre.pc'
to the PKG_CONFIG_PATH environment variable
Package 'libpcre', required by 'glib-2.0', not found
-- Found Cairo: /usr/lib64/libcairo.so
-- Cairo found. PNG output will be supported.
-- Looking for getopt
-- Looking for getopt - found
-- Attempting to build the GUI
-- wxWidgets found => GUI will be built
-- Found PythonInterp: /usr/bin/python (found version "2.7.16")
-- Found PythonLibs: /usr/lib64/libpython2.7.so (found version "2.7.16")
-- Python bindings will be compiled
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_Fortran_FLAGS
CMAKE_SKIP_INSTALL_RPATH
LIB_DESTINATION
SHARE_INSTALL_PREFIX
SYSCONF_INSTALL_DIR
-- Build files have been written to: /usr/src/RPM/BUILD/openbabel-2.4.1
+ make -j8 VERBOSE=1
make: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
/usr/bin/cmake -S/usr/src/RPM/BUILD/openbabel-2.4.1 -B/usr/src/RPM/BUILD/openbabel-2.4.1 --check-build-system CMakeFiles/Makefile.cmake 0
make: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
/usr/bin/cmake -E cmake_progress_start /usr/src/RPM/BUILD/openbabel-2.4.1/CMakeFiles /usr/src/RPM/BUILD/openbabel-2.4.1/CMakeFiles/progress.marks
make: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f CMakeFiles/Makefile2 all
make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend
make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/CMakeFiles/inchi.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/CMakeFiles/inchi.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/CMakeFiles/inchi.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/CMakeFiles/inchi.dir/depend.internal".
Scanning dependencies of target inchi
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src /usr/src/RPM/BUILD/openbabel-2.4.1/src/CMakeFiles/openbabel.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/CMakeFiles/openbabel.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/CMakeFiles/openbabel.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/CMakeFiles/openbabel.dir/depend.internal".
Scanning dependencies of target openbabel
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiisot.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichiisot.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiisot.c
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_io.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichi_io.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_io.c
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichicano.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichicano.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichicano.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichicano.c: In function 'FillTautLinearCT2':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichicano.c:732:30: warning: variable 'num_num' set but not used [-Wunused-but-set-variable]
int i, j, len=0, g, num_num, offset, max_len = 0, len_iso=0;
^~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichicans.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichicans.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichicans.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichicans.c: In function 'UnmarkNonStereo':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichicans.c:324:42: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
nPrevAtomRank = nRank[j];
^
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimak2.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichimak2.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimak2.c
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap1.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichimap1.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap1.c
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichican2.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichican2.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c: In function 'CtPartFill':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:1250:27: warning: variable 'rj_prev' set but not used [-Wunused-but-set-variable]
AT_RANK r, rj, nn, j, rj_prev;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c: In function 'CtPartCompare':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:1449:39: warning: variable 'len_iso_sort_key' set but not used [-Wunused-but-set-variable]
int diff, i, k1, k2, lenNumH, len_iso_sort_key, /*mid_iso_sort_key,*/ midAt;
^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:1449:26: warning: variable 'k2' set but not used [-Wunused-but-set-variable]
int diff, i, k1, k2, lenNumH, len_iso_sort_key, /*mid_iso_sort_key,*/ midAt;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:1449:22: warning: variable 'k1' set but not used [-Wunused-but-set-variable]
int diff, i, k1, k2, lenNumH, len_iso_sort_key, /*mid_iso_sort_key,*/ midAt;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c: In function 'CtFullCompare':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:1839:51: warning: variable 'len_iso_sort_key' set but not used [-Wunused-but-set-variable]
int len_iso_sort_key1, len_iso_sort_key2, len_iso_sort_key /*, mid_iso_sort_key*/;
^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:1838:50: warning: variable 'lenNumH' set but not used [-Wunused-but-set-variable]
int diff, i, k1, k2, lenNumH1, lenNumH2, lenNumH, maxVert /* min num atoms */;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:1837:13: warning: variable 'midAt' set but not used [-Wunused-but-set-variable]
midAt /* end of atoms only */;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c: In function 'CtPartCopy':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:2079:23: warning: variable 'endAt1' set but not used [-Wunused-but-set-variable]
int startAt1, endAt1, startAt2, endAt2; /*endCt,*/
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:2077:33: warning: variable 'endCt1' set but not used [-Wunused-but-set-variable]
int startCt1, startCt2, endCt1, endCt2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c: In function 'CanonGraph':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:2965:17: warning: variable 'qzb_rho_temp' set but not used [-Wunused-but-set-variable]
int qzb_rho_temp = 0;
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:3074:22: warning: the address of 'kLeast_rho_fix' will always evaluate as 'true' [-Waddress]
if ( pzb_rho_fix && kLeast_rho_fix && 0 == qzb_rho_fix ) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:3076:14: warning: the address of 'kLeast_rho_fix' will always evaluate as 'true' [-Waddress]
if ( kLeast_rho_fix ) {
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:3114:10: warning: the address of 'kLeast_rho' will always evaluate as 'true' [-Waddress]
if ( kLeast_rho ) {
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:2687:15: warning: 'tvh' may be used uninitialized in this function [-Wmaybe-uninitialized]
Node tvc, tvh;
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichican2.c:3186:8: warning: 'tvc' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( tvc == GetUnorderedPartitionMcrNode( &theta, tvc ) )
^
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichilnct.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichilnct.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichilnct.c
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichilnct.c:69:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/aux2atom.h: In function 'll_INChIToInchi_Atom':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/aux2atom.h:1024:41: warning: variable 'num_iso_H' set but not used [-Wunused-but-set-variable]
int num_iso_H;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/aux2atom.h:1220:47: warning: variable 'n' set but not used [-Wunused-but-set-variable]
int a, n, j, /* k,*/ sb_ord, cur_neigh, min_neigh;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/aux2atom.h:2056:41: warning: variable 'num_iso_H' set but not used [-Wunused-but-set-variable]
int num_iso_H;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/aux2atom.h:2252:47: warning: variable 'n' set but not used [-Wunused-but-set-variable]
int a, n, j, /* k,*/ sb_ord, cur_neigh, min_neigh;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichilnct.c: In function 'INChIToInchi_Input':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichilnct.c:206:21: warning: variable 'szCoordOld' set but not used [-Wunused-but-set-variable]
MOL_COORD *szCoordOld = NULL;
^~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichilnct.c:69:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/aux2atom.h: In function 'Extract0DParities':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/aux2atom.h:2731:47: warning: 'sb_ord_from_i1' may be used uninitialized in this function [-Wmaybe-uninitialized]
at[i1].sb_ord[j1] = sb_ord_from_i1;
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 3%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichinorm.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichinorm.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichinorm.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichinorm.c: In function 'remove_terminal_HDT':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichinorm.c:548:13: warning: variable 'old_trans' set but not used [-Wunused-but-set-variable]
S_CHAR old_trans[MAX_NUM_STEREO_BONDS];
^~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimake.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichimake.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimake.c
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 3%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiparm.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichiparm.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiparm.c
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiparm.c:76:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/ichiparm.h: In function 'ReadCommandLineParms':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/ichiparm.h:100:19: warning: unused variable 'bDisplayCompositeResults' [-Wunused-variable]
int bDisplayCompositeResults = 0;
^~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi/ichiparm.h:54:19: warning: variable 'nFontSize' set but not used [-Wunused-but-set-variable]
int nFontSize = -9;
^~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap2.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichimap2.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap2.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap2.c: In function 'parity_of_mapped_atom2':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap2.c:898:27: warning: variable 'num_trans_from' set but not used [-Wunused-but-set-variable]
int num_trans_to, num_trans_from, neigh1, neigh2;
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap2.c: In function 'BreakNeighborsTie':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap2.c:1228:25: warning: variable 'other_neig_ord' set but not used [-Wunused-but-set-variable]
int other_neigh[2], other_neig_ord[2], num_other_neigh;
^~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap4.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichimap4.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap4.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap4.c: In function 'map_stereo_atoms4':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap4.c:1000:35: warning: variable 'prev_stereo_center_parity' set but not used [-Wunused-but-set-variable]
int stereo_center_parity, prev_stereo_center_parity, sb_parity_calc, pass;
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap4.c: In function 'map_stereo_bonds4':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap4.c:788:33: warning: 'at_to_n2' may be used uninitialized in this function [-Wmaybe-uninitialized]
CurTreeRemoveIfLastAtom( cur_tree, at_to_n2 );
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichimap4.c:863:26: warning: 'at_to_n1' may be used uninitialized in this function [-Wmaybe-uninitialized]
CurTreeRemoveIfLastAtom( cur_tree, at_to_n1 );
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 1%] Building CXX object src/CMakeFiles/openbabel.dir/atom.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/atom.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/atom.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/atom.cpp: In member function 'int OpenBabel::OBAtom::HighestBondOrder()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/atom.cpp:306:24: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if(bond->GetBO() > highest)
~~~~~~~~~~~~~~^~~~~~~~~
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[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiqueu.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichiqueu.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiqueu.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiqueu.c: In function 'DFS_FindTautInARing':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiqueu.c:369:18: warning: variable 'nRingSystem' set but not used [-Wunused-but-set-variable]
AT_RANK nRingSystem;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiqueu.c: In function 'DFS_FindTautAltPath':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiqueu.c:486:18: warning: variable 'nRingSystem' set but not used [-Wunused-but-set-variable]
AT_RANK nRingSystem;
^~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichiring.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiring.c
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichiprt2.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt2.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt2.c: In function 'MakeIsoTautString':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt2.c:1234:13: warning: variable 'nMax' set but not used [-Wunused-but-set-variable]
AT_NUMB nMax;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt2.c: In function 'MakeIsoHString':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt2.c:1320:13: warning: variable 'nMax' set but not used [-Wunused-but-set-variable]
AT_NUMB nMax;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt2.c: In function 'abctol':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt2.c:1505:17: warning: variable 'sign' set but not used [-Wunused-but-set-variable]
long sign = 1;
^~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/alias.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/alias.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 4%] Building CXX object src/CMakeFiles/openbabel.dir/base.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/base.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/base.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 3%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt1.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichiprt1.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt1.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt1.c: In function 'OutputINChI1':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt1.c:1448:34: warning: variable 'bCurIsoStereo' set but not used [-Wunused-but-set-variable]
int bCurIso, bCurStereo, bCurIsoStereo, bCurHasIsoStereo /* Fix14 */, bCurTaut /*, bCurTaut2*/;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt1.c:1448:22: warning: variable 'bCurStereo' set but not used [-Wunused-but-set-variable]
int bCurIso, bCurStereo, bCurIsoStereo, bCurHasIsoStereo /* Fix14 */, bCurTaut /*, bCurTaut2*/;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt1.c:1269:10: warning: variable 'bPlainTabbedOutput' set but not used [-Wunused-but-set-variable]
int bPlainTabbedOutput;
^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt1.c:1258:30: warning: variable 'max_num_comp' set but not used [-Wunused-but-set-variable]
int num_comp[TAUT_NUM], max_num_comp;
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt1.c: In function 'WriteOrigBonds':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt1.c:3808:95: warning: variable 'num_trans' set but not used [-Wunused-but-set-variable]
int j, k, k2, kk, len, cur_len, j2=0, bond_stereo, bond_char, bond_parity, bond_parityNM, num_trans;
^~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 3%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt3.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichiprt3.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt3.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt3.c: In function 'str_AuxInvSp3Numb':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt3.c:1400:32: warning: variable 'pINChI_Aux_Prev' set but not used [-Wunused-but-set-variable]
INChI_Aux *pINChI_Aux, *pINChI_Aux_Prev, *pINChI_Aux_Taut;
^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt3.c: In function 'str_AuxIsoNumb':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt3.c:1539:32: warning: variable 'pINChI_Aux_Prev' set but not used [-Wunused-but-set-variable]
INChI_Aux *pINChI_Aux, *pINChI_Aux_Prev, *pINChI_Aux_Taut;
^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt3.c:1538:29: warning: variable 'pINChI_Taut' set but not used [-Wunused-but-set-variable]
INChI *pINChI, *pINChI_Taut;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt3.c:1538:19: warning: variable 'pINChI' set but not used [-Wunused-but-set-variable]
INChI *pINChI, *pINChI_Taut;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt3.c: In function 'str_AuxInvIsoSp3Numb':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiprt3.c:2132:32: warning: variable 'pINChI_Aux_Prev' set but not used [-Wunused-but-set-variable]
INChI_Aux *pINChI_Aux, *pINChI_Aux_Prev, *pINChI_Aux_Taut;
^~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_bns.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichi_bns.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'SubtractOrChangeAtHChargeBNS':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:928:21: warning: variable 'type' set but not used [-Wunused-but-set-variable]
int mask, type;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'MarkAtomsAtTautGroups':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:1121:44: warning: variable 'ineigh2' set but not used [-Wunused-but-set-variable]
int pass, i, j, v1, v2, ineigh1, ineigh2, vLast, vFirst, n, delta, err = 0;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'RestoreBnStructFlow':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:1272:41: warning: variable 'ineigh2' set but not used [-Wunused-but-set-variable]
int pass, i, v1, v2, ineigh1, ineigh2, vLast, n, delta, ret, err = 0;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'BnsTestAndMarkAltBonds':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:1524:16: warning: variable 'bSuccess' set but not used [-Wunused-but-set-variable]
int iedge, bSuccess, bError, nDots, nChanges, bTestForNonStereoBond;
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'fix_special_bonds':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:1814:27: warning: variable 'n4' set but not used [-Wunused-but-set-variable]
int i, k, n1, n2, n3, n4, i1, i2, i3, i4, bond_type;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'is_Z_atom':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:2295:7: warning: typedef 'Z_ELNUMBER' locally defined but not used [-Wunused-local-typedefs]
} Z_ELNUMBER;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'mark_alt_bonds_and_taut_groups':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:4236:10: warning: variable 'nOrigDelta' set but not used [-Wunused-but-set-variable]
int nOrigDelta, num_changed_bonds;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'SetRadEndpoints':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:6438:23: warning: variable 'num_new_edges' set but not used [-Wunused-but-set-variable]
int ret, i, j, k, num_new_edges, delta;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'SetRadEndpoints2':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:6522:30: warning: variable 'num_new_edges' set but not used [-Wunused-but-set-variable]
int ret = 0, i, j, k, n, num_new_edges, delta = 1;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'EliminatePlusMinusChargeAmbiguity':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:768:56: warning: 'cgNeg' may be used uninitialized in this function [-Wmaybe-uninitialized]
pBNS->vert[cgNeg].st_edge.cap -= dflow;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:764:56: warning: 'cgPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
pBNS->vert[cgPos].st_edge.cap += dflow;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c: In function 'fix_special_bonds':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:1923:61: warning: 'k_N' may be used uninitialized in this function [-Wmaybe-uninitialized]
BOND_TYPE_DOUBLE == (at[i].bond_type[i1=j[k_N]] & BOND_TYPE_MASK ) ) {
~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:1959:48: warning: 'i2' may be used uninitialized in this function [-Wmaybe-uninitialized]
iedge = pBNS->vert[i].iedge[i2];
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichi_bns.c:2062:38: warning: 'n2' may be used uninitialized in this function [-Wmaybe-uninitialized]
0 <= ( i4 = nNoMetalOtherNeighIndex2( at, i, n2, n3) ) ) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr5.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichirvr5.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr5.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr5.c: In function 'FixMobileHRestoredStructure':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr5.c:286:13: warning: variable 'iat_SB_N_III' set but not used [-Wunused-but-set-variable]
int iat_SB_N_III[MAX_DIFF_MOBH], iat_DB_N_III[MAX_DIFF_MOBH];
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr5.c:429:36: warning: variable 'pvEndp2' set but not used [-Wunused-but-set-variable]
BNS_VERTEX *pTg, *pvEndp, *pvEndp2, *pvCent;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr5.c:741:27: warning: variable 'pvEndp' set but not used [-Wunused-but-set-variable]
BNS_VERTEX *pTg, *pvEndp;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr5.c:486:32: warning: 'peCent2' may be used uninitialized in this function [-Wmaybe-uninitialized]
peCent2->flow --;
~~~~~~~^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr5.c:490:80: warning: 'peTg2' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( 1 == peTg->cap - peTg->flow && 0 == peTg2->cap - peTg2->flow &&
~~~~~^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr5.c:496:67: warning: 'vEndp2' may be used uninitialized in this function [-Wmaybe-uninitialized]
pTCGroups->pTCG[itg].tg_set_Minus = vEndp2+1;
~~~~~~^~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 5%] Building CXX object src/CMakeFiles/openbabel.dir/bond.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/bond.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/bond.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr4.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichirvr4.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c: In function 'FixMoreHydrogenInFormula':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c:383:23: warning: operation on 'neigh' may be undefined [-Wsequence-point]
at2[neigh=at2[i].neighbor[0]].chem_bonds_valence > at2[neigh].valence
~~~~~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c: In function 'MoveChargeToRemoveCenerpoints':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c:1512:39: warning: variable 'DoubleBondAcceptors' set but not used [-Wunused-but-set-variable]
S_CHAR MobileChargeNeigh[MAXVAL], DoubleBondAcceptors[MAXVAL], DoubleBondNotONeigh[MAXVAL];
^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c:1504:22: warning: variable 'num_endpoints' set but not used [-Wunused-but-set-variable]
int i, j, neigh, num_endpoints, num_success;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c: In function 'AddRemProtonsInRestrStruct':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c:2932:25: warning: variable 'tot_num_at' set but not used [-Wunused-but-set-variable]
int num_atoms, tot_num_at, num_deleted_H, num_tg, num_changed, num_deleted_components;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c: In function 'AddRemIsoProtonsInRestrStruct':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c:3134:45: warning: the address of 'num_prot' will always evaluate as 'true' [-Waddress]
for ( iComp = 0; iComp < num_components && num_prot; iComp ++ ) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c:3102:16: warning: variable 'bNormalizationFlags' set but not used [-Wunused-but-set-variable]
INCHI_MODE bNormalizationFlags;
^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c:3101:16: warning: variable 'pINChI' set but not used [-Wunused-but-set-variable]
INChI *pINChI;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr4.c:3096:25: warning: variable 'tot_num_at' set but not used [-Wunused-but-set-variable]
int num_atoms, tot_num_at, num_deleted_H, num_tg, num_changed;
^~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr1.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichirvr1.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c: In function 'GetTgroupInfoFromInChI':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:569:16: warning: variable 'tiSymmRank' set but not used [-Wunused-but-set-variable]
AT_NUMB *tiSymmRank = NULL;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:568:16: warning: variable 'tSymmRank' set but not used [-Wunused-but-set-variable]
AT_NUMB *tSymmRank = NULL;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:566:47: warning: variable 'bIso' set but not used [-Wunused-but-set-variable]
int ret, i, j, k, itg, num_atoms, len_tg, bIso, num_t_groups;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c: In function 'GetAtomRestoreInfo':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:853:9: warning: variable 'nLastFoundValenceOrdNumber' set but not used [-Wunused-but-set-variable]
int nLastFoundValenceOrdNumber, nLastFoundValenceState;
^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:852:37: warning: variable 'nFoundNeutralValenceOrdNumber' set but not used [-Wunused-but-set-variable]
int nFoundNeutralValenceExcess, nFoundNeutralValenceOrdNumber;
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:851:37: warning: variable 'nFirstNeutralValenceExcess' set but not used [-Wunused-but-set-variable]
int nOctetNeutralValenceExcess, nFirstNeutralValenceExcess;
^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:851:9: warning: variable 'nOctetNeutralValenceExcess' set but not used [-Wunused-but-set-variable]
int nOctetNeutralValenceExcess, nFirstNeutralValenceExcess;
^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:849:46: warning: variable 'num_non_bonding_electrons' set but not used [-Wunused-but-set-variable]
int i, j, j2, k, k2, charge, cur_charge, num_non_bonding_electrons;
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:849:26: warning: variable 'charge' set but not used [-Wunused-but-set-variable]
int i, j, j2, k, k2, charge, cur_charge, num_non_bonding_electrons;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c: In function 'nCountBnsSizes':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:1687:39: warning: variable 'metal_group_number' set but not used [-Wunused-but-set-variable]
int type, neigh_type, metal_group_number;
^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c: In function 'AddRadicalToMetal':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:2310:39: warning: variable 'pG2' set but not used [-Wunused-but-set-variable]
BNS_VERTEX *pG0=NULL, *pG1=NULL, *pG2=NULL, *pG3=NULL;
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:2310:28: warning: variable 'pG1' set but not used [-Wunused-but-set-variable]
BNS_VERTEX *pG0=NULL, *pG1=NULL, *pG2=NULL, *pG3=NULL;
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:2310:17: warning: variable 'pG0' set but not used [-Wunused-but-set-variable]
BNS_VERTEX *pG0=NULL, *pG1=NULL, *pG2=NULL, *pG3=NULL;
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c: In function 'AddCGroups2TCGBnStruct':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:2793:20: warning: variable 'nMaxCGroupNumber' set but not used [-Wunused-but-set-variable]
int nMaxCGroupNumber = 0;
^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:2788:39: warning: variable 'j2' set but not used [-Wunused-but-set-variable]
int i, i1, i2, j, j1, j2, k, k1, k2, n, c_point, c_neigh, cap, flow;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:2788:35: warning: variable 'j1' set but not used [-Wunused-but-set-variable]
int i, i1, i2, j, j1, j2, k, k1, k2, n, c_point, c_neigh, cap, flow;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:2774:24: warning: variable 'ret2' set but not used [-Wunused-but-set-variable]
int ret = 0, ret1, ret2, ret3, bNeedsFlower;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:2774:18: warning: variable 'ret1' set but not used [-Wunused-but-set-variable]
int ret = 0, ret1, ret2, ret3, bNeedsFlower;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c: In function 'AllocateAndInitTCGBnStruct':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:3278:9: warning: variable 'max_tg' set but not used [-Wunused-but-set-variable]
int max_tg, max_edges, max_vertices, len_alt_path, max_iedges, num_iedges, num_altp;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:3276:63: warning: variable 'flag_alt_bond' set but not used [-Wunused-but-set-variable]
int f1, f2, c1, c2, edge_cap, edge_flow, st_cap, st_flow, flag_alt_bond;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c: In function 'EvaluateChargeChanges':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:3627:27: warning: variable 'v0' set but not used [-Wunused-but-set-variable]
int pass, i, j, v0, v1, v2, v, ineigh1, /*ineigh2,*/ vLast, n, delta, ret, ie, err = 0;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c: In function 'RunBnsTestOnce':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:3786:21: warning: variable 'ret2' set but not used [-Wunused-but-set-variable]
int delta, ret, ret2, pass;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c: In function 'DisconnectedConnectedH':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr1.c:4609:31: warning: variable 'num_iso_H' set but not used [-Wunused-but-set-variable]
int i, j, k, n, m, num_H, num_iso_H;
^~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 4%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/bitvec.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/bitvec.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr6.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichirvr6.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr6.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr6.c: In function 'FixRestoredStructureStereo':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr6.c:361:35: warning: variable 'cmpInChI2_Prev' set but not used [-Wunused-but-set-variable]
INCHI_MODE cmpInChI_Prev, cmpInChI2_Prev;
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr6.c:361:20: warning: variable 'cmpInChI_Prev' set but not used [-Wunused-but-set-variable]
INCHI_MODE cmpInChI_Prev, cmpInChI2_Prev;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr6.c:1140:17: warning: variable 'aC' set but not used [-Wunused-but-set-variable]
int aN, aC, i1, i2, ePlus;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr6.c:1013:41: warning: 'pe' may be used uninitialized in this function [-Wmaybe-uninitialized]
pe->flow -= delta; /* make single bond */
~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr6.c:1020:25: warning: 'e' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( (ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE )) ) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichisort.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichisort.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichisort.c
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr7.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichirvr7.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr7.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr7.c: In function 'CompareAllOrigInchiToRevInChI':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr7.c:1046:33: warning: variable 'iMobileHpStruct' set but not used [-Wunused-but-set-variable]
int i, iInchiRec, iMobileH, iMobileHpStruct, num_components, iComponent, ret=0;
^~~~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ikey_base26.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ikey_base26.c
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ikey_dll.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ikey_dll.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ikey_dll.c: In function 'GetINCHIKeyFromINCHI':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ikey_dll.c:265:9: warning: "/*" within comment [-Wcomment]
/* source string ( was sproto[ncp]='\0'; should be sproto[lenproto]='\0'; ) */
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ikey_dll.c:141:8: warning: unused variable 'bytelen' [-Wunused-variable]
size_t bytelen = 32;
^~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichister.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c: In function 'are_3_vect_in_one_plane':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c:987:12: warning: variable 'prod' set but not used [-Wunused-but-set-variable]
double prod;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c: In function 'are_4at_in_one_plane':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c:996:25: warning: variable 'prod' set but not used [-Wunused-but-set-variable]
double coord[3][3], prod;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c: In function 'FixSb0DParities':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c:1568:27: warning: variable 'at_i2' set but not used [-Wunused-but-set-variable]
int at_i1, at_i2, j;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c:1568:20: warning: variable 'at_i1' set but not used [-Wunused-but-set-variable]
int at_i1, at_i2, j;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c: In function 'set_stereo_bonds_parity':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c:2383:15: warning: variable 'next_at_1' set but not used [-Wunused-but-set-variable]
int j, k, next_at_1, i_next_at_1, i_next_at_2, at_2, next_at_2, num_stereo_bonds, bFound, bAllene;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c: In function 'set_stereo_atom_parity':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c:469:34: warning: 'first_Up' may be used uninitialized in this function [-Wmaybe-uninitialized]
next2 = (first_Up+nNumNeigh - i - 1 ) % nNumNeigh; /* the 2nd before Up sequence */
~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c:340:69: note: 'first_Up' was declared here
int i, num_Up, num_Dn, bPrev_Up, cur_len_Up, cur_first_Up, len_Up, first_Up;
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c:1006:17: warning: 'min_actual_min_sine' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( !k || actual_min_sine < min_actual_min_sine ) {
~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichister.c:995:29: note: 'min_actual_min_sine' was declared here
double actual_min_sine, min_actual_min_sine;
^~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiread.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichiread.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c: In function 'ReadWriteInChI':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:1040:22: warning: the address of 'szMessage' will always evaluate as 'true' [-Waddress]
if ( szMessage )
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:1074:55: warning: variable 'len' set but not used [-Wunused-but-set-variable]
int iRec, iMob, iComp, nComp, len;
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:489:17: warning: variable 'pTAB' set but not used [-Wunused-but-set-variable]
const char *pTAB;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:488:10: warning: variable 'bPlainTabbedOutput' set but not used [-Wunused-but-set-variable]
int bPlainTabbedOutput;
^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:480:18: warning: variable 'bStereoType' set but not used [-Wunused-but-set-variable]
int pState, bStereoType;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c: In function 'OutputInChIAsRequested':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:1414:53: warning: variable 'iINChI2' set but not used [-Wunused-but-set-variable]
int j, k, k1, k2, ret2=0, iINChI, iINChI1, iINChI2;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c: In function 'InChILine2Data':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:2304:51: warning: variable 'retAux' set but not used [-Wunused-but-set-variable]
int iINChI, i, j, k, m, len1, len2, ret2 = 0, retAux = 0, stateAux = 0;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c: In function 'ReadInChICoord':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:4032:14: warning: variable 'fst' set but not used [-Wunused-but-set-variable]
int c, fst, ret=RI_ERR_ALLOC;
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c: In function 'ReadInChILine':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:4302:14: warning: variable 'fst' set but not used [-Wunused-but-set-variable]
int c, fst, ret=RI_ERR_ALLOC, len;
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c: In function 'ParseSegmentMobileH':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:6395:10: warning: variable 'num_open' set but not used [-Wunused-but-set-variable]
int num_open, state, ret, nAltMobileH = ALT_TAUT(bMobileH);
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:6392:37: warning: variable 'nNumBonds' set but not used [-Wunused-but-set-variable]
int nNumComponents, iComponent, nNumBonds, lenTautomer, tg_pos_Tautomer, iTGroup;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c: In function 'ParseSegmentConnections':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:6989:73: warning: variable 'iBond' set but not used [-Wunused-but-set-variable]
int nNumComponents, iComponent, nNumAtoms, nNumBonds, lenConnTable, iBond;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c: In function 'ParseSegmentIsoAtoms':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:5148:16: warning: 'len' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( len != iAtom ) {
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c: In function 'InChILine2Data':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:4414:42: warning: 'let2' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( ( let2 >= 'A') && ( let2 <= 'D') ) /* letter-2 OK */
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:4311:25: note: 'let2' was declared here
unsigned char let1, let2;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichiread.c:4311:19: warning: 'let1' may be used uninitialized in this function [-Wmaybe-uninitialized]
unsigned char let1, let2;
^~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr3.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichirvr3.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c: In function 'FillTgDiffHChgFH':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:133:25: warning: variable 'itg_prev' set but not used [-Wunused-but-set-variable]
int i, j, iat, itg, itg_prev, num, itg_out, bOverflow;
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c: In function 'FixFixedHRestoredStructure':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:423:15: warning: variable 'iat_DB_O' set but not used [-Wunused-but-set-variable]
short iat_DB_O[MAX_DIFF_FIXH], iat_SB_O_Minus[MAX_DIFF_FIXH];
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:530:15: warning: variable 'iat_DB_O_Plus' set but not used [-Wunused-but-set-variable]
short iat_DB_O_Plus[MAX_DIFF_FIXH], iat_SB_NH[MAX_DIFF_FIXH];
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:662:46: warning: variable 'iat_DB_O' set but not used [-Wunused-but-set-variable]
short iat_SB_N_Minus[MAX_DIFF_FIXH], iat_DB_O[MAX_DIFF_FIXH];
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:791:46: warning: variable 'iat_DB_O' set but not used [-Wunused-but-set-variable]
short iat_SB_N_Minus[MAX_DIFF_FIXH], iat_DB_O[MAX_DIFF_FIXH];
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:907:44: warning: variable 'iat_DB_Charged' set but not used [-Wunused-but-set-variable]
short iat_SB_Neutr[MAX_DIFF_FIXH], iat_DB_Charged[MAX_DIFF_FIXH];
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:1028:15: warning: variable 'iat_DB_O' set but not used [-Wunused-but-set-variable]
short iat_DB_O[MAX_DIFF_FIXH], iat_SB_NH[MAX_DIFF_FIXH];
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:1416:15: warning: variable 'iat_DB_NHn_Plus' set but not used [-Wunused-but-set-variable]
short iat_DB_NHn_Plus[MAX_DIFF_FIXH], iat_SB_NHm_Neutr[MAX_DIFF_FIXH];
^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:1969:46: warning: variable 'iat_DB_O_Neutr' set but not used [-Wunused-but-set-variable]
short iat_SB_O_Minus[MAX_DIFF_FIXH], iat_DB_O_Neutr[MAX_DIFF_FIXH];
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:2090:46: warning: variable 'iat_DB_O_Neutr' set but not used [-Wunused-but-set-variable]
short iat_SB_O_Minus[MAX_DIFF_FIXH], iat_DB_O_Neutr[MAX_DIFF_FIXH];
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:2212:15: warning: variable 'iat_DB_N_Neutr' set but not used [-Wunused-but-set-variable]
short iat_DB_N_Neutr[MAX_DIFF_FIXH], iat_SB_O_Minus[MAX_DIFF_FIXH];
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:2351:47: warning: variable 'icNH2' set but not used [-Wunused-but-set-variable]
int iNH2, iatC, iatNH2, icNH2;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:2488:47: warning: variable 'icNH2' set but not used [-Wunused-but-set-variable]
int iNH2, iatC, iatNH2, icNH2, j1, j2;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:2619:15: warning: variable 'iat_SB_Neutr' set but not used [-Wunused-but-set-variable]
short iat_SB_Neutr[MAX_DIFF_FIXH], iat_DB_Charged[MAX_DIFF_FIXH];
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:2808:19: warning: variable 'iat_SB_N_Neutr' set but not used [-Wunused-but-set-variable]
short iat_SB_N_Neutr[MAX_DIFF_FIXH], iat_DB_O[MAX_DIFF_FIXH];
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:3006:23: warning: variable 'iat_SB_N_Neutr' set but not used [-Wunused-but-set-variable]
short iat_SB_N_Neutr[MAX_DIFF_FIXH], iat_DB_O[MAX_DIFF_FIXH];
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:3424:15: warning: variable 'iat_SB_Neutr' set but not used [-Wunused-but-set-variable]
short iat_SB_Neutr[MAX_DIFF_FIXH], iat_DB_Charged[MAX_DIFF_FIXH];
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:3570:46: warning: variable 'iat_DB_O_Neutr' set but not used [-Wunused-but-set-variable]
short iat_SB_N_Minus[MAX_DIFF_FIXH], iat_DB_O_Neutr[MAX_DIFF_FIXH];
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:3709:15: warning: variable 'iat_SB_Neutr' set but not used [-Wunused-but-set-variable]
short iat_SB_Neutr[MAX_DIFF_FIXH], iat_DB_Charged[MAX_DIFF_FIXH];
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:4114:46: warning: variable 'iat_DB_N' set but not used [-Wunused-but-set-variable]
short iat_SB_O_Minus[MAX_DIFF_FIXH], iat_DB_N[MAX_DIFF_FIXH];
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr3.c:4263:74: warning: variable 'iat_DB_O' set but not used [-Wunused-but-set-variable]
short iat_SB_O_Minus[MAX_DIFF_FIXH], iat_Central[MAX_DIFF_FIXH], iat_DB_O[MAX_DIFF_FIXH];
^~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_main.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/inchi_dll_main.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_main.c
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/inchi_dll_a.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a.c: In function 'STDINCHIGEN_Setup':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a.c:171:5: warning: unused variable 'force_std' [-Wunused-variable]
int force_std=0;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a.c: In function 'INCHIGEN_DoNormalization':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a.c:612:22: warning: variable 'ret2a' set but not used [-Wunused-but-set-variable]
int ret1a=0, ret2a=0; /* for derivatives and ring-chain */
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a.c:612:13: warning: variable 'ret1a' set but not used [-Wunused-but-set-variable]
int ret1a=0, ret2a=0; /* for derivatives and ring-chain */
^~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 4%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr2.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichirvr2.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c: In function 'RestoreAtomConnectionsSetStereo':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:260:24: warning: operation on 'jv' may be undefined [-Wsequence-point]
at[jv = at[n_vertex].neighbor[0]].valence + at[jv].num_H == 3 &&
~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:262:24: warning: operation on 'jn' may be undefined [-Wsequence-point]
at[jn = at[n_vertex].neighbor[1]].valence + at[jn].num_H == 3 &&
~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:116:19: warning: variable 'num_stereo_bonds' set but not used [-Wunused-but-set-variable]
int num_stereo_bonds, num_stereo_centers, num_stereo_bonds2, num_stereo_centers2;
^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c: In function 'AdjustTgroupsToForbiddenEdges2':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:2351:23: warning: variable 'ie' set but not used [-Wunused-but-set-variable]
EdgeIndex ie, ie1, ie2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:2455:23: warning: variable 'ie' set but not used [-Wunused-but-set-variable]
EdgeIndex ie, ie1, ie2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:1664:20: warning: variable 'bonds_valence' set but not used [-Wunused-but-set-variable]
int num_bonds, bonds_valence;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:1664:9: warning: variable 'num_bonds' set but not used [-Wunused-but-set-variable]
int num_bonds, bonds_valence;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c: In function 'MovePlusFromS2DiaminoCarbon':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:3027:19: warning: operation on 'pvS' may be undefined [-Wsequence-point]
(pvS = pBNS->vert+i)->st_edge.cap == pvS->st_edge.flow &&
~~~~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c: In function 'FixMetal_Nminus_Ominus':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:4002:44: warning: variable 'nDeltaChargeMax' set but not used [-Wunused-but-set-variable]
int num_failed, num_success, n, nDeltaChargeMax, nMetalCharge;
^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c: In function 'EliminateNitrogen5Val3Bonds':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:4765:31: warning: variable 'pv1' set but not used [-Wunused-but-set-variable]
BNS_VERTEX *pv0, *pv1, *pv2 = NULL;
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:4764:59: warning: variable 'ie01' set but not used [-Wunused-but-set-variable]
EdgeIndex iePlus, ie, ie12 = NO_VERTEX, ie02, ie01;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:4764:53: warning: variable 'ie02' set but not used [-Wunused-but-set-variable]
EdgeIndex iePlus, ie, ie12 = NO_VERTEX, ie02, ie01;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c: In function 'PlusFromDB_N_DB_O_to_Metal':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:5066:21: warning: variable 'bForbiddenCarbonCharges' set but not used [-Wunused-but-set-variable]
int i, j, k, n, bForbiddenCarbonCharges, delta, ret2, ret, num_NO, num_M;
^~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c: In function 'RemoveRadFromMobileHEndpoint':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:5272:17: warning: variable 'tgroup_number' set but not used [-Wunused-but-set-variable]
int tgroup_number, num_endpoints;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c: In function 'RemoveRadFromMobileHEndpointFixH':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:5638:18: warning: variable 'tgroup_number' set but not used [-Wunused-but-set-variable]
int tgroup_number, num_endpoints;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:5633:34: warning: variable 'num_endp' set but not used [-Wunused-but-set-variable]
int itg, j, k, n, m, num_endp;
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c: In function 'AdjustTgroupsToForbiddenEdges2':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:2413:23: warning: 'ev1' may be used uninitialized in this function [-Wmaybe-uninitialized]
ev1->flow --;
~~~~~~~~~~^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichirvr2.c:2680:20: warning: 'e' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( !e->flow ) {
~^~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/inchi_dll.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll.c: In function 'GetStructFromINCHI':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll.c:2100:9: warning: variable 'bStdFormat' set but not used [-Wunused-but-set-variable]
int bStdFormat = 0;
^~~~~~~~~~
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[ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichitaut.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/ichitaut.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichitaut.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichitaut.c: In function 'GetOtherSaltType':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichitaut.c:1970:33: warning: variable 'bond_type' set but not used [-Wunused-but-set-variable]
int type, endpoint_valence, bond_type, centerpoint;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichitaut.c: In function 'MarkTautomerGroups':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichitaut.c:3588:30: warning: the address of 'DfsPath' will always evaluate as 'true' [-Waddress]
if ( !nDfsPathPos || !DfsPath ) {
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichitaut.c:3237:18: warning: variable 'max_num_t' set but not used [-Wunused-but-set-variable]
int *pnum_t, max_num_t, bIgnoreIsotopic;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichitaut.c:3237:10: warning: variable 'pnum_t' set but not used [-Wunused-but-set-variable]
int *pnum_t, max_num_t, bIgnoreIsotopic;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/ichitaut.c:3234:10: warning: variable 'bTautBond' set but not used [-Wunused-but-set-variable]
int bTautBond, bNonTautBond, bAltBond;
^~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 9%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/util.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/util.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/util.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/util.c: In function 'get_num_H':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/util.c:532:46: warning: variable 'el_number_O' set but not used [-Wunused-but-set-variable]
static int el_number_N = 0, el_number_S, el_number_O, el_number_C;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/util.c: In function 'nBondsValToMetal':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/util.c:782:12: warning: variable 'neigh' set but not used [-Wunused-but-set-variable]
int i, neigh, bond_type, nVal2Metal = 0;
^~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/runichi.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/runichi.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/runichi.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/runichi.c: In function 'SortAndPrintINChI':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/runichi.c:769:9: warning: unused variable 'ikflag' [-Wunused-variable]
int ikflag = 0;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/runichi.c:764:33: warning: variable 'iINChI' set but not used [-Wunused-but-set-variable]
int j, i, k, k1, ret, iINChI, max_num_components;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/runichi.c: In function 'ProcessOneStructure':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/runichi.c:2815:26: warning: variable 'ret2a' set but not used [-Wunused-but-set-variable]
int ret1a=0, ret2a=0; /* for derivatives and ring-chain */
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/runichi.c:2815:17: warning: variable 'ret1a' set but not used [-Wunused-but-set-variable]
int ret1a=0, ret2a=0; /* for derivatives and ring-chain */
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/runichi.c:2758:36: warning: variable 'maxINChI' set but not used [-Wunused-but-set-variable]
int nRet = 0, nRet1, i, k, maxINChI=0;
^~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a2.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/inchi_dll_a2.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c: In function 'NormOneStructureINChI':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c:399:18: warning: unused variable 'res' [-Wunused-variable]
int res = CreateCompositeNormAtom( composite_norm_data,
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c: In function 'CanonOneStructureINChI':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c:448:15: warning: unused variable 'pINChI_Aux2' [-Wunused-variable]
PINChI_Aux2 **pINChI_Aux2 = genctl->pINChI_Aux;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c:447:11: warning: unused variable 'pINChI2' [-Wunused-variable]
PINChI2 **pINChI2 = genctl->pINChI;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c: In function 'Normalization_step':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c:1369:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
(0 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[0] ||
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c: In function 'CreateCompositeNormAtom':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/inchi_dll_a2.c:1803:74: warning: variable 'nNumRemovedProtons' set but not used [-Wunused-but-set-variable]
int i, j, jj, k, n, m, tot_num_at, tot_num_H, cur_num_at, cur_num_H, nNumRemovedProtons;
^~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 8%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/sha2.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/sha2.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/sha2.c
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 10%] Building CXX object src/CMakeFiles/openbabel.dir/chiral.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/chiral.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/chiral.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 9%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/strutil.c.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D_USRDLL -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -O2 -g -DNDEBUG -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchi.dir/strutil.c.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c: In function 'fix_odd_things':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:138:20: warning: variable 'el_number_O' set but not used [-Wunused-but-set-variable]
static int el_number_O;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:135:20: warning: variable 'el_number_P' set but not used [-Wunused-but-set-variable]
static int el_number_P;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c: In function 'nFindOneOM':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:792:18: warning: variable 'n_OM_best' set but not used [-Wunused-but-set-variable]
int i, n_OM, n_OM_best, best_value, cur_value, diff;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c: In function 'RemoveInpAtBond':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:1774:27: warning: variable 'k2' set but not used [-Wunused-but-set-variable]
int i, j, m, m2, k2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c: In function 'bHeteroAtomMayHaveXchgIsoH':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3104:76: warning: variable 'cur_num_iso_H' set but not used [-Wunused-but-set-variable]
int j, val, is_O=0, is_Cl=0, is_N=0, is_H=0, num_H, iat_numb, bAccept, cur_num_iso_H;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3104:34: warning: variable 'is_N' set but not used [-Wunused-but-set-variable]
int j, val, is_O=0, is_Cl=0, is_N=0, is_H=0, num_H, iat_numb, bAccept, cur_num_iso_H;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3104:25: warning: variable 'is_Cl' set but not used [-Wunused-but-set-variable]
int j, val, is_O=0, is_Cl=0, is_N=0, is_H=0, num_H, iat_numb, bAccept, cur_num_iso_H;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3104:17: warning: variable 'is_O' set but not used [-Wunused-but-set-variable]
int j, val, is_O=0, is_Cl=0, is_N=0, is_H=0, num_H, iat_numb, bAccept, cur_num_iso_H;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c: In function 'bNumHeterAtomHasIsotopicH':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3181:37: warning: variable 'is_N' set but not used [-Wunused-but-set-variable]
int i, j, val, is_O=0, is_Cl=0, is_N=0, is_H=0, num_H, iat_numb, bAccept, num_iso_H, cur_num_iso_H, num_iso_atoms;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3181:28: warning: variable 'is_Cl' set but not used [-Wunused-but-set-variable]
int i, j, val, is_O=0, is_Cl=0, is_N=0, is_H=0, num_H, iat_numb, bAccept, num_iso_H, cur_num_iso_H, num_iso_atoms;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3181:20: warning: variable 'is_O' set but not used [-Wunused-but-set-variable]
int i, j, val, is_O=0, is_Cl=0, is_N=0, is_H=0, num_H, iat_numb, bAccept, num_iso_H, cur_num_iso_H, num_iso_atoms;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c: In function 'WriteOrigAtomDataToSDfile':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3814:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_DEUTERIUM(i) (!strcmp( at[i].elname, "D" ) || at[i].iso_atw_diff == 2 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3821:55: note: in expansion of macro 'IS_DEUTERIUM'
#define ANY_ISO(i, X) ((X)? (at[i].iso_atw_diff && !IS_DEUTERIUM(i) && !IS_TRITIUM(i)) :\
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4281:38: note: in expansion of macro 'ANY_ISO'
nNumIsoLines += ANY_ISO(i, bAtomsDT);
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3815:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_TRITIUM(i) (!strcmp( at[i].elname, "T" ) || at[i].iso_atw_diff == 3 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3821:75: note: in expansion of macro 'IS_TRITIUM'
#define ANY_ISO(i, X) ((X)? (at[i].iso_atw_diff && !IS_DEUTERIUM(i) && !IS_TRITIUM(i)) :\
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4281:38: note: in expansion of macro 'ANY_ISO'
nNumIsoLines += ANY_ISO(i, bAtomsDT);
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3814:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_DEUTERIUM(i) (!strcmp( at[i].elname, "D" ) || at[i].iso_atw_diff == 2 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3822:55: note: in expansion of macro 'IS_DEUTERIUM'
(at[i].iso_atw_diff || IS_DEUTERIUM(i) || IS_TRITIUM(i)))
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4281:38: note: in expansion of macro 'ANY_ISO'
nNumIsoLines += ANY_ISO(i, bAtomsDT);
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3815:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_TRITIUM(i) (!strcmp( at[i].elname, "T" ) || at[i].iso_atw_diff == 3 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3822:75: note: in expansion of macro 'IS_TRITIUM'
(at[i].iso_atw_diff || IS_DEUTERIUM(i) || IS_TRITIUM(i)))
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4281:38: note: in expansion of macro 'ANY_ISO'
nNumIsoLines += ANY_ISO(i, bAtomsDT);
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3814:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_DEUTERIUM(i) (!strcmp( at[i].elname, "D" ) || at[i].iso_atw_diff == 2 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4317:26: note: in expansion of macro 'IS_DEUTERIUM'
int nIsotopeH = IS_DEUTERIUM(i)? 1 : IS_TRITIUM(i)? 2 : 0;
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3815:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_TRITIUM(i) (!strcmp( at[i].elname, "T" ) || at[i].iso_atw_diff == 3 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4317:47: note: in expansion of macro 'IS_TRITIUM'
int nIsotopeH = IS_DEUTERIUM(i)? 1 : IS_TRITIUM(i)? 2 : 0;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3814:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_DEUTERIUM(i) (!strcmp( at[i].elname, "D" ) || at[i].iso_atw_diff == 2 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3821:55: note: in expansion of macro 'IS_DEUTERIUM'
#define ANY_ISO(i, X) ((X)? (at[i].iso_atw_diff && !IS_DEUTERIUM(i) && !IS_TRITIUM(i)) :\
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3826:29: note: in expansion of macro 'ANY_ISO'
#define NORMAL_ISO(i, X) (ANY_ISO(i, X) && !ABNORMAL_ISO(i))
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4354:14: note: in expansion of macro 'NORMAL_ISO'
if ( NORMAL_ISO(i, bAtomsDT) ) {
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3815:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_TRITIUM(i) (!strcmp( at[i].elname, "T" ) || at[i].iso_atw_diff == 3 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3821:75: note: in expansion of macro 'IS_TRITIUM'
#define ANY_ISO(i, X) ((X)? (at[i].iso_atw_diff && !IS_DEUTERIUM(i) && !IS_TRITIUM(i)) :\
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3826:29: note: in expansion of macro 'ANY_ISO'
#define NORMAL_ISO(i, X) (ANY_ISO(i, X) && !ABNORMAL_ISO(i))
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4354:14: note: in expansion of macro 'NORMAL_ISO'
if ( NORMAL_ISO(i, bAtomsDT) ) {
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3814:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_DEUTERIUM(i) (!strcmp( at[i].elname, "D" ) || at[i].iso_atw_diff == 2 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3822:55: note: in expansion of macro 'IS_DEUTERIUM'
(at[i].iso_atw_diff || IS_DEUTERIUM(i) || IS_TRITIUM(i)))
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3826:29: note: in expansion of macro 'ANY_ISO'
#define NORMAL_ISO(i, X) (ANY_ISO(i, X) && !ABNORMAL_ISO(i))
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4354:14: note: in expansion of macro 'NORMAL_ISO'
if ( NORMAL_ISO(i, bAtomsDT) ) {
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3815:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_TRITIUM(i) (!strcmp( at[i].elname, "T" ) || at[i].iso_atw_diff == 3 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3822:75: note: in expansion of macro 'IS_TRITIUM'
(at[i].iso_atw_diff || IS_DEUTERIUM(i) || IS_TRITIUM(i)))
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3826:29: note: in expansion of macro 'ANY_ISO'
#define NORMAL_ISO(i, X) (ANY_ISO(i, X) && !ABNORMAL_ISO(i))
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4354:14: note: in expansion of macro 'NORMAL_ISO'
if ( NORMAL_ISO(i, bAtomsDT) ) {
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3814:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_DEUTERIUM(i) (!strcmp( at[i].elname, "D" ) || at[i].iso_atw_diff == 2 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3821:55: note: in expansion of macro 'IS_DEUTERIUM'
#define ANY_ISO(i, X) ((X)? (at[i].iso_atw_diff && !IS_DEUTERIUM(i) && !IS_TRITIUM(i)) :\
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4521:22: note: in expansion of macro 'ANY_ISO'
if ( ANY_ISO(i, bAtomsDT) && !ALIASED_AT(i) ) {
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3815:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_TRITIUM(i) (!strcmp( at[i].elname, "T" ) || at[i].iso_atw_diff == 3 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3821:75: note: in expansion of macro 'IS_TRITIUM'
#define ANY_ISO(i, X) ((X)? (at[i].iso_atw_diff && !IS_DEUTERIUM(i) && !IS_TRITIUM(i)) :\
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4521:22: note: in expansion of macro 'ANY_ISO'
if ( ANY_ISO(i, bAtomsDT) && !ALIASED_AT(i) ) {
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3814:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_DEUTERIUM(i) (!strcmp( at[i].elname, "D" ) || at[i].iso_atw_diff == 2 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3822:55: note: in expansion of macro 'IS_DEUTERIUM'
(at[i].iso_atw_diff || IS_DEUTERIUM(i) || IS_TRITIUM(i)))
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4521:22: note: in expansion of macro 'ANY_ISO'
if ( ANY_ISO(i, bAtomsDT) && !ALIASED_AT(i) ) {
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3815:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_TRITIUM(i) (!strcmp( at[i].elname, "T" ) || at[i].iso_atw_diff == 3 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3822:75: note: in expansion of macro 'IS_TRITIUM'
(at[i].iso_atw_diff || IS_DEUTERIUM(i) || IS_TRITIUM(i)))
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4521:22: note: in expansion of macro 'ANY_ISO'
if ( ANY_ISO(i, bAtomsDT) && !ALIASED_AT(i) ) {
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3814:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_DEUTERIUM(i) (!strcmp( at[i].elname, "D" ) || at[i].iso_atw_diff == 2 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4522:26: note: in expansion of macro 'IS_DEUTERIUM'
if ( IS_DEUTERIUM(i) ) {
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:3815:82: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
#define IS_TRITIUM(i) (!strcmp( at[i].elname, "T" ) || at[i].iso_atw_diff == 3 && !strcmp( at[i].elname, "H" ))
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4526:26: note: in expansion of macro 'IS_TRITIUM'
if ( IS_TRITIUM(i) ) {
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4212:9: warning: variable 'bNext' set but not used [-Wunused-but-set-variable]
int bNext /*, s*/;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4207:9: warning: variable 'flag_bad_charge' set but not used [-Wunused-but-set-variable]
int flag_bad_charge=0, flag_bad_iso = 0;
^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c: In function 'fix_odd_things':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:603:28: warning: 'c' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( c == neigh && at[i2].bond_type[ineigh] == BOND_TYPE_SINGLE )
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c: In function 'WriteOrigAtomDataToSDfile':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4463:39: warning: '%3d' directive writing between 3 and 10 bytes into a region of size 9 [-Wformat-overflow=]
sprintf( entry, " %3d %3d", i+1, (int)at[i].charge );
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4463:37: note: directive argument in the range [1, 2147483647]
sprintf( entry, " %3d %3d", i+1, (int)at[i].charge );
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4463:37: note: directive argument in the range [-128, 127]
In file included from /usr/include/stdio.h:862,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:40:
/usr/include/bits/stdio2.h:33:10: note: '__builtin___sprintf_chk' output between 9 and 17 bytes into a destination of size 10
return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4484:43: warning: '%3d' directive writing between 3 and 10 bytes into a region of size 9 [-Wformat-overflow=]
sprintf( entry, " %3d %3d", i+1, radical );
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4484:41: note: directive argument in the range [1, 2147483647]
sprintf( entry, " %3d %3d", i+1, radical );
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:4484:41: note: directive argument in the range [1, 3]
In file included from /usr/include/stdio.h:862,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi/strutil.c:40:
/usr/include/bits/stdio2.h:33:10: note: '__builtin___sprintf_chk' output between 9 and 16 bytes into a destination of size 10
return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 7%] Building CXX object src/CMakeFiles/openbabel.dir/builder.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/builder.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:188:7: warning: multi-line comment [-Wcomment]
// \ \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:190:7: warning: multi-line comment [-Wcomment]
// \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:197:7: warning: multi-line comment [-Wcomment]
// \ \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:199:7: warning: multi-line comment [-Wcomment]
// \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:265:7: warning: multi-line comment [-Wcomment]
// \ \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:1215:5: warning: multi-line comment [-Wcomment]
// / / v2 / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:1324:9: warning: multi-line comment [-Wcomment]
// / \
^
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:33:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:33:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:33:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp: In member function 'bool OpenBabel::OBBuilder::Build(OpenBabel::OBMol&, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/builder.cpp:1060:32: warning: 'match_idx' may be used uninitialized in this function [-Wmaybe-uninitialized]
match_indices[0] = match_idx;
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 10%] Linking C shared library ../../../lib64/libinchi.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/libinchi && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchi.dir/link.txt --verbose=1
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/data_utilities.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/data_utilities.cpp
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for(int i = 0; (i<NEU); i++)
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result = Match4Constraints(pep,na,nb,nc,nd);
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result = MatchConstraint(na,pep->n1);
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TracePeptideChain(mol,na,r);
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if ( (a=((*ppat) & (*p++)) ^ (*ppat++)) ) break;
~~~~^~
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std::vector<StereoCenter> &stereoCenters;
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State(const std::vector<unsigned int> &_symmetry_classes,
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/generic.cpp: In member function 'void OpenBabel::OBOrbitalData::LoadClosedShellOrbitals(std::vector<double>, std::vector<std::__cxx11::basic_string<char> >, int)':
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if (alphaHOMO > energies.size())
~~~~~~~~~~^~~~~~~~~~~~~~~~~
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if (i < alphaHOMO)
~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/generic.cpp: In member function 'void OpenBabel::OBOrbitalData::LoadAlphaOrbitals(std::vector<double>, std::vector<std::__cxx11::basic_string<char> >, int)':
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if (alphaHOMO > energies.size())
~~~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/generic.cpp:1516:15: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (i < alphaHOMO)
~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/generic.cpp: In member function 'void OpenBabel::OBOrbitalData::LoadBetaOrbitals(std::vector<double>, std::vector<std::__cxx11::basic_string<char> >, int)':
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if (betaHOMO > energies.size())
~~~~~~~~~^~~~~~~~~~~~~~~~~
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if (i < betaHOMO)
~~^~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/forcefield.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In static member function 'static bool OpenBabel::OBForceField::IgnoreCalculation(int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:384:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (_ignoreAtom == a)
~~~~~~~~~~~~^~~~
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if (_ignoreAtom == b)
~~~~~~~~~~~~^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In static member function 'static bool OpenBabel::OBForceField::IgnoreCalculation(int, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:396:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (_ignoreAtom == b)
~~~~~~~~~~~~^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In static member function 'static bool OpenBabel::OBForceField::IgnoreCalculation(int, int, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:406:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (_ignoreAtom == d)
~~~~~~~~~~~~^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintType(int) const':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:658:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFConstraint>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (index >= _constraints.size())
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In member function 'double OpenBabel::OBFFConstraints::GetConstraintValue(int) const':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:666:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFConstraint>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (index >= _constraints.size())
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomA(int) const':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:674:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFConstraint>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (index >= _constraints.size())
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomB(int) const':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:682:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFConstraint>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (index >= _constraints.size())
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomC(int) const':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:690:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFConstraint>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (index >= _constraints.size())
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomD(int) const':
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if (index >= _constraints.size())
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In member function 'int OpenBabel::OBForceField::FastRotorSearch(bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:1346:55: warning: array subscript has type 'char' [-Wchar-subscripts]
num_permutations = factorial[num_rotors_to_permute];
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:1350:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBRotor*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i=0; i<vrotors.size(); ++i)
~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:1363:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<unsigned int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i=0; i<reordered_rotors.size(); ++i) {
~^~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:1284:9: warning: unused variable 'origLogLevel' [-Wunused-variable]
int origLogLevel = _loglvl;
^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:1320:12: warning: variable 'energy_offset' set but not used [-Wunused-but-set-variable]
double energy_offset;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In function 'void OpenBabel::Reweight(std::vector<std::vector<double> >&, std::vector<int>, double)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:1564:15: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (j == rotorKey[i])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:1583:15: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (j == rotorKey[i])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In member function 'void OpenBabel::OBForceField::DistanceGeometry()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:1963:26: warning: variable 'l_bc' set but not used [-Wunused-but-set-variable]
double l_ab, l_bc, l_ac; // lower limits
^~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:22:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h: In member function 'void OpenBabel::OBFFConstraints::AddAtomZConstraint(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rab0' may be used uninitialized in this function [-Wmaybe-uninitialized]
class OBFPRT OBFFConstraint
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rbc0' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h: In member function 'void OpenBabel::OBFFConstraints::AddTorsionConstraint(int, int, int, int, double)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rab0' may be used uninitialized in this function [-Wmaybe-uninitialized]
class OBFPRT OBFFConstraint
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rbc0' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h: In member function 'void OpenBabel::OBFFConstraints::AddDistanceConstraint(int, int, double)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rab0' may be used uninitialized in this function [-Wmaybe-uninitialized]
class OBFPRT OBFFConstraint
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rbc0' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h: In member function 'void OpenBabel::OBFFConstraints::AddAngleConstraint(int, int, int, double)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rab0' may be used uninitialized in this function [-Wmaybe-uninitialized]
class OBFPRT OBFFConstraint
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rbc0' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h: In member function 'void OpenBabel::OBFFConstraints::AddIgnore(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rab0' may be used uninitialized in this function [-Wmaybe-uninitialized]
class OBFPRT OBFFConstraint
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rbc0' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h: In member function 'void OpenBabel::OBFFConstraints::AddAtomConstraint(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rab0' may be used uninitialized in this function [-Wmaybe-uninitialized]
class OBFPRT OBFFConstraint
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rbc0' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h: In member function 'void OpenBabel::OBFFConstraints::AddAtomYConstraint(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rab0' may be used uninitialized in this function [-Wmaybe-uninitialized]
class OBFPRT OBFFConstraint
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rbc0' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h: In member function 'void OpenBabel::OBFFConstraints::AddAtomXConstraint(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rab0' may be used uninitialized in this function [-Wmaybe-uninitialized]
class OBFPRT OBFFConstraint
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/forcefield.h:234:16: warning: 'constraint.OpenBabel::OBFFConstraint::rbc0' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp: In member function 'int OpenBabel::OBForceField::FastRotorSearch(bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefield.cpp:1403:11: warning: 'minE' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (minE < best_minE) {
^~
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rotorKey[idx + 1] = minj;
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/obconversion.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/obconversion.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/zipstream.h:333,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/obconversion.cpp:53:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/zipstreamimpl.h: In instantiation of 'std::streampos zlib_stream::basic_unzip_streambuf<charT, traits>::seekoff(std::streamoff, std::ios_base::seekdir, std::ios_base::openmode) [with charT = char; traits = std::char_traits<char>; std::streampos = std::fpos<__mbstate_t>; std::streamoff = long int; std::ios_base::seekdir = std::_Ios_Seekdir; std::ios_base::openmode = std::_Ios_Openmode]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/zipstreamimpl.h:391:3: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/zipstreamimpl.h:401:8: warning: variable 'ch' set but not used [-Wunused-but-set-variable]
char ch;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/zipstreamimpl.h: In instantiation of 'std::streampos zlib_stream::basic_unzip_streambuf<charT, traits>::seekpos(std::streampos, std::ios_base::openmode) [with charT = char; traits = std::char_traits<char>; std::streampos = std::fpos<__mbstate_t>; std::ios_base::openmode = std::_Ios_Openmode]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/zipstreamimpl.h:444:3: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/zipstreamimpl.h:456:8: warning: variable 'ch' set but not used [-Wunused-but-set-variable]
char ch;
^~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/query.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/query.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/parsmart.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp: In function 'int OpenBabel::CreateAtom(OpenBabel::Pattern*, OpenBabel::AtomExpr*, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp:450:15: warning: variable 'size' set but not used [-Wunused-but-set-variable]
int index,size;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp: In function 'int OpenBabel::CreateBond(OpenBabel::Pattern*, OpenBabel::BondExpr*, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp:482:15: warning: variable 'size' set but not used [-Wunused-but-set-variable]
int index,size;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp: In member function 'OpenBabel::Pattern* OpenBabel::OBSmartsPattern::SMARTSParser(OpenBabel::Pattern*, OpenBabel::ParseState*, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp:1489:45: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int nbr_idx=0; nbr_idx < pat->atom[stat->closure[index]].nbrs.size(); ++nbr_idx) {
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp: At global scope:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp:151:14: warning: 'int OpenBabel::GetVectorBinding()' declared 'static' but never defined [-Wunused-function]
static int GetVectorBinding();
^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp:1716:20: warning: 'OpenBabel::AtomExpr* OpenBabel::NotAtomExpr(OpenBabel::AtomExpr*)' defined but not used [-Wunused-function]
static AtomExpr *NotAtomExpr( AtomExpr *expr )
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/parsmart.cpp:293:14: warning: 'int OpenBabel::IsInvalidAtom(OpenBabel::AtomExpr*)' defined but not used [-Wunused-function]
static int IsInvalidAtom( AtomExpr *expr )
^~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/phmodel.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/phmodel.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/residue.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/residue.cpp
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[ 16%] Building CXX object src/CMakeFiles/openbabel.dir/rotamer.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/rotamer.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/rotamer.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/rotamer.cpp: In member function 'void OpenBabel::OBRotamerList::AddRotamer(std::vector<int>)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/rotamer.cpp:405:11: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while (angle < 0.0)
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/rotamer.cpp:407:10: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while (angle > 360.0)
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/rotamer.cpp: In member function 'bool OpenBabel::OBRotamerList::SetCurrentCoordinates(OpenBabel::OBMol&, std::vector<int>)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/rotamer.cpp:538:11: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while (angle < 0.0)
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/rotamer.cpp:540:10: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while (angle > 360.0)
^~~~~
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[ 15%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/pointgroup.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::establish_pairs(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:265:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if( elem->transform[i] >= _mol->NumAtoms() ){ /* No symmetric atom yet */
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::check_transform_order(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:309:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if( elem->transform[i] == i ) /* Identity transform is Ok for any order */
~~~~~~~~~~~~~~~~~~~^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:313:34: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if( elem->transform[j] == i )
~~~~~~~~~~~~~~~~~~~^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::same_transform(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*, OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:356:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if( b->transform[j] != i )
~~~~~~~~~~~~~~~~^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp: In member function 'OpenBabel::OBPointGroup::Symbol OpenBabel::OBPointGroup::IdentifyPointGroupSymbol(double)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:1956:37: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
|| d->NormalAxesCounts[2] >= maxAxis) { // Are there the perpendicular C2 axes?
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:1959:28: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (d->PlanesCount >= maxAxis + 1) { // Likely Dnh
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:1984:33: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
else if (d->PlanesCount == maxAxis) { // Likely Dnd
~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:2086:29: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
else if (d->PlanesCount >= maxAxis) { // Cnv
~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp: In member function 'void OpenBabel::OBPointGroup::Symmetrize(OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:2173:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (unsigned int i = 0; i < d->PlanesCount; i++)
~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:2180:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (unsigned int i = 0; i < d->NormalAxesCount; i++)
~~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/pointgroup.cpp:2187:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (unsigned int i = 0; i < d->ImproperAxesCount; i++)
~~^~~~~~~~~~~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/tokenst.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/tokenst.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/spectrophore.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/spectrophore.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/spectrophore.cpp:25:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/spectrophore.h: In constructor 'OpenBabel::OBSpectrophore::OBSpectrophore()':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/spectrophore.h:566:31: warning: 'OpenBabel::OBSpectrophore::_numberOfProbes' will be initialized after [-Wreorder]
unsigned int _numberOfProbes;
^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/spectrophore.h:560:31: warning: 'double** OpenBabel::OBSpectrophore::_property' [-Wreorder]
double** _property;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/spectrophore.cpp:31:1: warning: when initialized here [-Wreorder]
OBSpectrophore::OBSpectrophore(void)
^~~~~~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/spectrophore.cpp:25:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/spectrophore.h: In copy constructor 'OpenBabel::OBSpectrophore::OBSpectrophore(const OpenBabel::OBSpectrophore&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/spectrophore.h:567:31: warning: 'OpenBabel::OBSpectrophore::_spectro' will be initialized after [-Wreorder]
std::vector<double> _spectro;
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/spectrophore.h:560:31: warning: 'double** OpenBabel::OBSpectrophore::_property' [-Wreorder]
double** _property;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/spectrophore.cpp:48:1: warning: when initialized here [-Wreorder]
OBSpectrophore::OBSpectrophore(const OBSpectrophore& s)
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/spectrophore.cpp: In member function 'void OpenBabel::OBSpectrophore::_luSolve(double**, std::vector<int>&, double*, unsigned int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/spectrophore.cpp:1905:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (k = 0; k < i; ++k)
~~^~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 16%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/rotor.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/rotor.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/rotor.cpp: In member function 'void OpenBabel::OBRotorList::RemoveSymVals(OpenBabel::OBMol&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/rotor.cpp:256:69: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (this_side->GetAtomicNum() == 6 && this_side->GetHyb() == hyb && this_side->GetValence() == (hyb + 1) ) {
~~~~~~~~~~~~~~~~~~~~^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/rotor.cpp:256:103: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (this_side->GetAtomicNum() == 6 && this_side->GetHyb() == hyb && this_side->GetValence() == (hyb + 1) ) {
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
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[ 17%] Building CXX object src/CMakeFiles/openbabel.dir/transform.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/transform.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/transform.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/transform.cpp: In member function 'virtual OpenBabel::OBBase* OpenBabel::OBMol::DoTransformations(const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/transform.cpp:201:52: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if(itr2!=pOptions->end() && NumHvyAtoms()!=atoi(itr2->second.c_str()))
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 17%] Building CXX object src/CMakeFiles/openbabel.dir/typer.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/typer.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/typer.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 13%] Building CXX object src/CMakeFiles/openbabel.dir/mcdlutil.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/mcdlutil.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:421:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'bool OpenBabel::TSimpleMolecule::threeBondResolve(int, int, double&, double&, OpenBabel::neighbourlist*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:964:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (i=0; i<bk[an].nb; i++) {
~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:966:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (n != bondExcluded) {
~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:978:26: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (k=0; k<rs; k++) if (bondList[k] == (*blStore)[j]) {
~^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:991:22: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (j=0; j<rs; j++) {
~^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:1013:20: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (i=0; i<nAtoms(); i++) {
~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::deleteAtom(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:1392:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (i=0; i<nAtoms(); i++) if (i != index) {
~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:1392:38: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (i=0; i<nAtoms(); i++) if (i != index) {
~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'bool OpenBabel::TSimpleMolecule::makeFragment(std::vector<int>&, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:1467:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=0; j<list.size(); j++) if (list[j] == l) test1=true;
~^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:1474:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
} while (k<list.size());
~^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::defC(int&, int, int, std::vector<int>&, std::vector<int>&, std::vector<std::vector<int> >&, std::vector<int>&, std::vector<int>&, std::vector<int>&, std::vector<int>&, std::vector<int>&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2005:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=0; j<atomCycle[i].size(); j++) if (atomDefine[atomCycle[i][j]]>0) atDef=atDef+1;
~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2015:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (cN>=0) if (maxAtDef==atomCycle[cN].size()) {
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2030:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=1; j<atomCycle[cN].size(); j++) atomCycle[cN][j-1]=atomCycle[cN][j];
~^~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2036:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=0;j<atomCycle[cN].size()-maxAtDef; j++) {
~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::defA(int&, int, int, int, std::vector<int>&, std::vector<int>, std::vector<int>&, std::vector<std::vector<int> >&, std::vector<int>&, std::vector<int>&, std::vector<int>&, std::vector<int>&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2103:98: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (baseCycle>0) for (i=0; i<baseCycle; i++) if (cycleDefine[i]==0) if (atomCycle[i].size()<j) {
~~~~~~~~~~~~~~~~~~~^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::redraw(std::vector<int>, std::vector<int>, int, int&, int, int, int, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2234:67: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
for (j=0; j<baseCycle; j++) if(cycleDescription[j].size() == cs) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2236:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (k=0; k<cycleDescription[j].size(); k++) if (bondList[k] != cycleDescription[j][k]) {
~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2260:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=1; j<cycleDescription[i].size(); j++) {
~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::flipSmall(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2981:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<list1.size(); i++) {
~^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2961:10: warning: variable 'test' set but not used [-Wunused-but-set-variable]
bool test;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::bondEnlarge(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3020:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<list.size(); i++) { //coordinates change
~^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:2998:10: warning: variable 'test' set but not used [-Wunused-but-set-variable]
bool test;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'bool OpenBabel::TSimpleMolecule::correctDblBondStereo()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3099:26: warning: comparison of integer expressions of different signedness: 'short int' and '__gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type' {aka 'long unsigned int'} [-Wsign-compare]
if (bond->at[0]==dblbond->bstereo_refs[ref_atom1] || bond->at[1]==dblbond->bstereo_refs[ref_atom1])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3099:75: warning: comparison of integer expressions of different signedness: 'short int' and '__gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type' {aka 'long unsigned int'} [-Wsign-compare]
if (bond->at[0]==dblbond->bstereo_refs[ref_atom1] || bond->at[1]==dblbond->bstereo_refs[ref_atom1])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3101:26: warning: comparison of integer expressions of different signedness: 'short int' and '__gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type' {aka 'long unsigned int'} [-Wsign-compare]
if (bond->at[0]==dblbond->bstereo_refs[ref_atom2] || bond->at[1]==dblbond->bstereo_refs[ref_atom2])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3101:75: warning: comparison of integer expressions of different signedness: 'short int' and '__gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type' {aka 'long unsigned int'} [-Wsign-compare]
if (bond->at[0]==dblbond->bstereo_refs[ref_atom2] || bond->at[1]==dblbond->bstereo_refs[ref_atom2])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'bool OpenBabel::compareAtoms(int, int, std::vector<std::vector<int>*>)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3123:37: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<int>*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if ((a1 < 0) || (a2 < 0) || (a1 >= aeqList.size()) || (a2 >= aeqList.size())) return result;
~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3123:63: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<int>*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if ((a1 < 0) || (a2 < 0) || (a1 >= aeqList.size()) || (a2 >= aeqList.size())) return result;
~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::makeEquivalentList(std::vector<int>&, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3287:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=0; j<lL->size(); j++) (*lL)[i]=0;
~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3295:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<equivalenceList.size(); i++) equivalenceList[i]=0;
~^~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3305:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<int>*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i=0; i<aeqList.size(); i++) delete(aeqList.at(i));
~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'bool OpenBabel::incrementValues(std::vector<int>&, std::vector<int>)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3321:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'const value_type' {aka 'const int'} [-Wsign-compare]
if (l <= maxValues[i]) {
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'int OpenBabel::TSimpleMolecule::correctOverlapped()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3370:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<rotBondList.size(); i++)
~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3423:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<inner_bonds.size(); i++) if (inner_bonds[i] != 0) {
~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3433:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<remainder.size(); i++) {
~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'void OpenBabel::deleteIntElement(std::vector<int>*, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:3536:44: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (i=0; i<source->size(); i++) if (i != index) {
~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TEditedMolecule::addAsTemplate(OpenBabel::TEditedMolecule&, int, int, int, int, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4212:19: warning: variable 'nBondsOld' set but not used [-Wunused-but-set-variable]
int nAtomsOld,nBondsOld,naDef1,naDef,i;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4213:10: warning: variable 'test' set but not used [-Wunused-but-set-variable]
bool test,test1,test2;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4213:15: warning: variable 'test1' set but not used [-Wunused-but-set-variable]
bool test,test1,test2;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4213:21: warning: variable 'test2' set but not used [-Wunused-but-set-variable]
bool test,test1,test2;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4215:40: warning: variable 'xCenter' set but not used [-Wunused-but-set-variable]
double r,scale,xOld,yOld,xNew,yNew,xCenter,yCenter;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4215:48: warning: variable 'yCenter' set but not used [-Wunused-but-set-variable]
double r,scale,xOld,yOld,xNew,yNew,xCenter,yCenter;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'OpenBabel::TEditedMolecule* OpenBabel::TEditedMolecule::extractFragment(int, std::vector<int>*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4406:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (list.size()>1) for (i=0; i<(list.size()-1); i++) for (j=i+1; j<list.size(); j++) if (list[i]>list[j]) {
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4406:71: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (list.size()>1) for (i=0; i<(list.size()-1); i++) for (j=i+1; j<list.size(); j++) if (list[i]>list[j]) {
~^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4411:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<list.size(); i++) inverseList[list[i]]=i;
~^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4414:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<list.size(); i++) {
~^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4395:10: warning: variable 'test' set but not used [-Wunused-but-set-variable]
bool test;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'int OpenBabel::TEditedMolecule::prepareQuery(OpenBabel::TSimpleMolecule&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4587:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=0; j<queryInverse.size(); j++) queryInverse[j]=queryAQTested[j];
~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4592:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<queryQHydr.size(); i++) queryQHydr[i]=queryBQTested[i];
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4597:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<bSTestedStore.size(); i++) bSTestedStore[i]=bSTested[i];
~^~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TEditedMolecule::removeHydrogen(std::vector<int>*, std::vector<int>*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4632:31: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (qEnumerator->size() != nAtoms()) qEnumerator->resize(nAtoms());
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4633:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<qEnumerator->size(); i++) (*qEnumerator)[i]=i;
~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4662:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=0; j<qEnumerator->size(); j++) {
~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'bool OpenBabel::TEditedMolecule::fragmentSearch(OpenBabel::TEditedMolecule*, std::vector<int>*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4849:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (molecule1->listarSize()>aSTested.size()) aSTested.resize(molecule1->listarSize());
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4850:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (molecule1->listarSize()>bSTested.size()) bSTested.resize(molecule1->listarSize());
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4851:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (molecule1->listarSize()>queryQHydr.size()) queryQHydr.resize(molecule1->listarSize());
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4852:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (molecule1->listarSize()>queryAQTested.size()) queryAQTested.resize(molecule1->listarSize());
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4853:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (molecule1->listarSize()>queryBQTested.size()) queryBQTested.resize(molecule1->listarSize());
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4854:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (molecule1->listarSize()>queryCurrentAssignment.size()) queryCurrentAssignment.resize(molecule1->listarSize());
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4855:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (this->listarSize()>queryAQTested.size()) queryAQTested.resize(this->listarSize());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5032:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
if (test2) for (j=0; j<molecule1->nBonds(); j++) if (bSTested[j]>=0) (*bondLabel)[j]=1; else (*bondLabel)[j]=0;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4836:9: warning: variable 'cycleNumber' set but not used [-Wunused-but-set-variable]
int cycleNumber;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'bool OpenBabel::TemplateRedraw::loadTemplates()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5111:24: warning: catching polymorphic type 'class std::exception' by value [-Wcatch-value=]
} catch (exception ex) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'bool OpenBabel::TemplateRedraw::internalBondsPresent(OpenBabel::TEditedMolecule*, OpenBabel::TSimpleMolecule*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5201:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (i=0; i<mQuery->nAtoms(); i++) aList[mQuery->queryAQTested[i]]=1;
~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5202:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (i=0; i<mQuery->nBonds(); i++) bList[mQuery->queryBQTested[i]]=1;
~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TemplateRedraw::rotateBondVertically(OpenBabel::TSimpleMolecule*, std::vector<int>, int, double, double, double&, double&, double&, double&, double&, double&, int&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5232:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<bondList.size(); i++) {
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5277:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<bondList.size(); i++) {
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TemplateRedraw::selectFragmentConfiguration(OpenBabel::TSimpleMolecule*, std::vector<int>*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5311:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<atomList->size(); i++) {
~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5328:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<bondListAll.size(); i++) bondList[i]=bondListAll[i];
~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5358:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<bondList.size(); i++) {
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5368:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<bondList.size(); i++) {
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TemplateRedraw::rescaleSingleFragment(OpenBabel::TSimpleMolecule*, std::vector<int>*, OpenBabel::PartFragmentDefinition&, double)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5399:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<atomList->size(); i++) {
~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5412:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<atomList->size(); i++) {
~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5428:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<atomList->size(); i++) {
~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'int OpenBabel::TemplateRedraw::coordinatesPrepare(OpenBabel::TEditedMolecule&, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5667:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::TEditedMolecule*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=kk; i<queryData.size(); i++) if ((TEditedMolecule *)queryData[i]->fragmentSearch(&sm,NULL)) {
~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5715:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<enumerator.size(); i++) enumerator[i]=-1;
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5718:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<enumerator.size(); i++) if (enumerator[i]==-1) {
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5726:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=0; j<enumerator.size(); j++) if (enumerator[j]==i) {
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5798:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::TEditedMolecule*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<groupsFind.size(); i++) {
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5828:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::TEditedMolecule*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<groupsFind.size(); i++) delete(groupsFind[i]);
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5656:9: warning: variable 'naStore' set but not used [-Wunused-but-set-variable]
int naStore;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TemplateRedraw::redrawFine(OpenBabel::TSimpleMolecule&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5894:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=0; j<atomList.size(); j++) {
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5906:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::TEditedMolecule*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (frCount=0; frCount<molList.size(); frCount++) {
~~~~~~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5922:28: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::TEditedMolecule*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (frCount=0; frCount<molList.size(); frCount++) {
~~~~~~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5945:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<atomList.size(); i++) atomList[i]=i;
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:5960:28: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::TEditedMolecule*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (frCount=0; frCount<molList.size(); frCount++) {
~~~~~~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6000:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::PartFragmentDefinition*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0;i<frList.size(); i++) {
~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6007:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::PartFragmentDefinition*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<frList.size(); i++) {
~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6026:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::StereoBondStore*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<stereoBondList.size(); i++) {
~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6034:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::StereoBondStore*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<stereoBondList.size(); i++) delete(stereoBondList[i]);
~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6035:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::PartFragmentDefinition*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<frList.size(); i++) delete(frList[i]);
~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6036:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::TEditedMolecule*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<molList.size(); i++) delete(molList[i]);
~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'int OpenBabel::indexOf(std::__cxx11::string, std::__cxx11::string, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6358:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (result == string::npos) result=-1;
~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6359:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (result >= instring.length()) result=-1;
~~~~~~~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'std::__cxx11::string OpenBabel::getAtomMCDL(OpenBabel::OBMol*, int, std::vector<int>, std::vector<int>, std::vector<int>, std::vector<int>)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6546:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=0; j<priority.size(); j++) priority[j]=0;
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6591:43: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (anumStereo.size() > 1) for (i=0; i<(anumStereo.size()-1); i++) if (anumStereo[i] >= 0) {
~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6593:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=i+1; j<anumStereo.size(); j++) if ((anumStereo[i] >= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) n++;
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6599:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=i+1; j<anumStereo.size(); j++) if ((anumStereo[i] >= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) {
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6609:28: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=i+1; j<anumStereo.size(); j++) if ((anumStereo[i] >= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) anumStereo[j]=-1;
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6612:28: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=i+1; j<anumStereo.size(); j++) if ((anumStereo[i] >= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) anumStereo[j]=-2;
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6623:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (k == 1) for (i=0; i<anumStereo.size(); i++) if (anumStereo[i] == -1) { //all parities should be changed to satisfy..
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6632:34: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j<v.size(); j++) {
~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6632:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j<v.size(); j++) {
~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6642:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i < v.size(); i++) {
~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'std::__cxx11::string OpenBabel::getBondMCDL(OpenBabel::OBMol*, int, int, std::vector<int>, std::vector<int>, int (*)[4], std::vector<int>, std::vector<int>)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6843:43: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (anumStereo.size() > 1) for (i=0; i<(anumStereo.size()-1); i++) if (anumStereo[i] >= 0) {
~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6845:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=i+1; j<anumStereo.size(); j++) if (bondEquivalent(anumStereo[i],anumStereo[j],eqList,sm)) n++;
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6850:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=i+1; j<anumStereo.size(); j++) if (bondEquivalent(anumStereo[i],anumStereo[j],eqList,sm)) {
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6864:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=i+1; j<anumStereo.size(); j++) if (bondEquivalent(anumStereo[i],anumStereo[j],eqList,sm)) {
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6872:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (j=i+1; j<anumStereo.size(); j++) if (bondEquivalent(anumStereo[i],anumStereo[j],eqList,sm)) anumStereo[j]=-1;
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6877:34: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j<v.size(); j++) {
~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6877:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j<v.size(); j++) {
~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6887:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i < v.size(); i++) {
~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6680:26: warning: variable 'n4' set but not used [-Wunused-but-set-variable]
int i,j,n,m,n1,n2,n3,n4,an1,an2,an3,an4,k;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'void OpenBabel::implementAtomStereo(std::vector<int>&, std::vector<int>&, std::vector<int>&, std::vector<double>, std::vector<double>, int, int, std::__cxx11::string)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:6960:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (n1 < (astereo.length()-1)) astereo=astereo.substr(n1+1); else astereo="";
~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'void OpenBabel::implementBondStereo(std::vector<int>, std::vector<int>, std::vector<double>&, std::vector<double>&, int, int, std::__cxx11::string)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:7024:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (n1 < (bstereo.length()-1)) bstereo=bstereo.substr(n1+1); else bstereo="";
~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:7067:34: warning: catching polymorphic type 'class std::exception' by value [-Wcatch-value=]
} catch (exception ex) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:7081:34: warning: catching polymorphic type 'class std::exception' by value [-Wcatch-value=]
} catch (exception ex) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'int OpenBabel::groupRedraw(OpenBabel::OBMol*, int, int, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:7159:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (i=0; i<atomList.size(); i++) allAtomList[atomList[i]]=1;
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:7167:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i=0; i<atomList.size(); i++) {
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In function 'bool OpenBabel::parseFormula(std::__cxx11::string, std::vector<int>&, int&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:7209:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (n<value.length()) if ((value.at(n)>='0') && (value.at(n)<='9')) {
~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:7212:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
while ((n2<(value.length()-1)) && (value.at(n2)>='0') && (value.at(n2)<='9')) n2++;
~~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:7233:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (n<value.length()) if ((value.at(n)>='0') && (value.at(n)<='9')) {
~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:7236:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
while ((n2<(value.length()-1)) && (value.at(n2)>='0') && (value.at(n2)<='9')) n2++;
~~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp: In member function 'void OpenBabel::TEditedMolecule::addAsTemplate(OpenBabel::TEditedMolecule&, int, int, int, int, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mcdlutil.cpp:4329:16: warning: 'r1' may be used uninitialized in this function [-Wmaybe-uninitialized]
xNew=r1*scale*xu1+this->getAtom(thisAN)->rx;
~~^~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 17%] Building CXX object src/CMakeFiles/openbabel.dir/obmolecformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/obmolecformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/obmolecformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/obmolecformat.cpp: In static member function 'static bool OpenBabel::OBMoleculeFormat::DoOutputOptions(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/obmolecformat.cpp:208:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (; c < pmol->NumConformers()-1; ++c) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/obmolecformat.cpp: In static member function 'static bool OpenBabel::OBMoleculeFormat::OutputMolsFromReaction(OpenBabel::OBReaction*, OpenBabel::OBConversion*, OpenBabel::OBFormat*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/obmolecformat.cpp:444:14: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(i=0;i<pReact->NumReactants();i++)
~^~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/obmolecformat.cpp:446:14: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(i=0;i<pReact->NumProducts();i++)
~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 18%] Building CXX object src/CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/dlhandler_unix.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 16%] Building CXX object src/CMakeFiles/openbabel.dir/ring.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/ring.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ring.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 13%] Building CXX object src/CMakeFiles/openbabel.dir/mol.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/mol.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp: In member function 'unsigned int OpenBabel::OBMol::NumHvyAtoms()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:783:30: warning: unnecessary parentheses in declaration of 'i' [-Wparentheses]
vector<OBAtom*>::iterator(i);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp: In member function 'OpenBabel::OBAtom* OpenBabel::OBMol::NewAtom(long unsigned int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:1654:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (vb->GetBgn() > _natoms || vb->GetEnd() > _natoms)
~~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:1654:58: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (vb->GetBgn() > _natoms || vb->GetEnd() > _natoms)
~~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp: In member function 'bool OpenBabel::OBMol::AddAtom(OpenBabel::OBAtom&, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:1783:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (vb->GetBgn() > _natoms || vb->GetEnd() > _natoms)
~~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:1783:58: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (vb->GetBgn() > _natoms || vb->GetEnd() > _natoms)
~~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp: In member function 'bool OpenBabel::OBMol::StripSalts(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:1853:23: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (i->size() < threshold || (threshold == 0 && i != max))
~~~~~~~~~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp: In member function 'void OpenBabel::OBMol::SetConformer(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:4178:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (i >= 0 && i < _vconf.size())
~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp: In member function 'bool OpenBabel::OBMol::MakeDativeBonds()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:4276:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
bool higherorder = bo > bestbond->GetBondOrder();
~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp: In member function 'bool OpenBabel::OBMol::ConvertZeroBonds()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:4342:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBBond*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int n = 0; n < bonds.size(); n++) {
~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/mol.cpp:4364:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int n = 1; n < scores.size(); n++) {
~~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 18%] Building CXX object src/CMakeFiles/openbabel.dir/confsearch.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/confsearch.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:25:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:25:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:25:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp: In member function 'unsigned int OpenBabel::LFSR::GetNext()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:81:47: warning: suggest parentheses around '-' in operand of '&' [-Wparentheses]
_lfsr = (_lfsr >> 1) ^ (unsigned int)(0 - (_lfsr & 1u) & _poly);
~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp: In constructor 'OpenBabel::OBDiversePoses::OBDiversePoses(const OpenBabel::OBMol&, double, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:115:20: warning: 'OpenBabel::OBDiversePoses::cutoff' will be initialized after [-Wreorder]
const double cutoff;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:109:12: warning: 'bool OpenBabel::OBDiversePoses::_percise' [-Wreorder]
bool _percise;
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:120:3: warning: when initialized here [-Wreorder]
OBDiversePoses::OBDiversePoses(const OBMol &ref, double RMSD, bool percise):
^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp: In member function 'bool OpenBabel::OBDiversePoses::AddPose(double*, double)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:146:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (unsigned int a = 0; a < natoms; ++a)
~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp: In member function 'bool OpenBabel::OBDiversePoses::AddPose(std::vector<OpenBabel::vector3>, double)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:185:14: warning: unused variable 'min_rmsd' [-Wunused-variable]
double min_rmsd = DBL_MAX;
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:249:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int k = *c; k < levels.size(); ++k) {
~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp: In member function 'std::vector<OpenBabel::vector3> OpenBabel::OBDiversePoses::GetHeavyAtomCoords(const std::vector<OpenBabel::vector3>&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:263:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (unsigned int a = 0; a < natoms; ++a)
~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp: In member function 'int OpenBabel::OBForceField::DiverseConfGen(double, unsigned int, double, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:379:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 1; i < rl.Size() + 1; ++i, rotor = rl.NextRotor(ri)) { // foreach rotor
~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:417:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<long unsigned int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0 ; i < rotor_sizes.size(); ++i) {
~~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:432:42: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
} while (combination != 1 && counter < nconfs); // The LFSR always terminates with a 1
~~~~~~~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/confsearch.cpp:355:9: warning: unused variable 'origLogLevel' [-Wunused-variable]
int origLogLevel = _loglvl;
^~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 18%] Building CXX object src/CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/svgpainter.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/svgpainter.cpp:18:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/depict/svgpainter.h: In constructor 'OpenBabel::SVGPainter::SVGPainter(std::ostream&, std::set<std::pair<OpenBabel::OBColor, OpenBabel::OBColor> >*, bool, double, double)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/depict/svgpainter.h:77:11: warning: 'OpenBabel::SVGPainter::m_fontPointSize' will be initialized after [-Wreorder]
int m_fontPointSize;
^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/depict/svgpainter.h:75:12: warning: 'bool OpenBabel::SVGPainter::m_isFillcolor' [-Wreorder]
bool m_isFillcolor;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/svgpainter.cpp:34:3: warning: when initialized here [-Wreorder]
SVGPainter::SVGPainter(ostream& ofs, std::set<ColorGradient>* gradients, bool withViewBox,
^~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/svgpainter.cpp:18:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/depict/svgpainter.h:75:12: warning: 'OpenBabel::SVGPainter::m_isFillcolor' will be initialized after [-Wreorder]
bool m_isFillcolor;
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/depict/svgpainter.h:74:32: warning: 'std::set<std::pair<OpenBabel::OBColor, OpenBabel::OBColor> >* OpenBabel::SVGPainter::m_Gradients' [-Wreorder]
std::set<ColorGradient> *m_Gradients;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/svgpainter.cpp:34:3: warning: when initialized here [-Wreorder]
SVGPainter::SVGPainter(ostream& ofs, std::set<ColorGradient>* gradients, bool withViewBox,
^~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 19%] Building CXX object src/CMakeFiles/openbabel.dir/math/transform3d.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/math/transform3d.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/transform3d.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 19%] Building CXX object src/CMakeFiles/openbabel.dir/math/vector3.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/math/vector3.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/vector3.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 18%] Building CXX object src/CMakeFiles/openbabel.dir/conformersearch.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/conformersearch.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:20:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:20:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:20:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp: In member function 'virtual double OpenBabel::OBMinimizingRMSDConformerScore::Score(OpenBabel::OBMol&, unsigned int, const RotorKeys&, const std::vector<double*>&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:239:12: warning: unused variable 'score' [-Wunused-variable]
double score = ff->Energy(false); // no gradients
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp: In member function 'int OpenBabel::OBConformerSearch::local_opt()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:728:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
for (i = 1; i <= m_rotorList.Size(); ++i, rotor = m_rotorList.NextRotor(ri))
~~^~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp: In member function 'int OpenBabel::OBConformerSearch::reproduce(OpenBabel::RotorKey&, OpenBabel::RotorKey&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:789:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (iniche > -1)
~~~~~~~^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp: In member function 'int OpenBabel::OBConformerSearch::share_fitness()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:944:37: warning: comparison of integer expressions of different signedness: 'std::vector<std::vector<int> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if ((dynamic_niches.size () < nb_niches) && (dynamic_niches.size () %2))
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:959:30: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (dist < min_dist )
~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:972:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (imax == -1)
~~~~~^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:988:40: warning: comparison of integer expressions of different signedness: 'std::vector<std::vector<int> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (dynamic_niches.size () < nb_niches)
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:915:10: warning: unused variable 'flag_niched' [-Wunused-variable]
bool flag_niched = false;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp: In member function 'double OpenBabel::OBConformerSearch::sharing_generation()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:1077:20: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
while (ninsert < ((half_pop * 2) / 3))
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:1086:24: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (iround < imax)
~~~~~~~^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:1094:33: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (ninsert >= half_pop)
~~~~~~~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:1119:20: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
while (ninsert < half_pop)
~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:1043:23: warning: unused variable 'lowest' [-Wunused-variable]
double sum = 0.0, lowest = 0.0, highest = 0.0;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:1043:37: warning: unused variable 'highest' [-Wunused-variable]
double sum = 0.0, lowest = 0.0, highest = 0.0;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp: In member function 'double OpenBabel::OBConformerSearch::MakeSelection()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/conformersearch.cpp:492:31: warning: 'highest' may be used uninitialized in this function [-Wmaybe-uninitialized]
double sum = 0.0, lowest, highest;
^~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 19%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/matrix3x3.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 17%] Building CXX object src/CMakeFiles/openbabel.dir/tautomer.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/tautomer.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/tautomer.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/tetranonplanar.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/stereo.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/stereo.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/stereo.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/stereo.cpp: In static member function 'static void OpenBabel::OBStereo::Permutate(OpenBabel::OBStereo::Refs&, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/stereo.cpp:77:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<long unsigned int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (i < 0 || i >= refs.size())
~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/stereo.cpp:79:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<long unsigned int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (j < 0 || j >= refs.size())
~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/stereo.cpp: In static member function 'static OpenBabel::OBStereo::Refs OpenBabel::OBStereo::Permutated(const Refs&, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/stereo.cpp:88:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<long unsigned int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (i < 0 || i >= refs.size())
~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/stereo.cpp:90:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<long unsigned int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (j < 0 || j >= refs.size())
~~^~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 18%] Building CXX object src/CMakeFiles/openbabel.dir/distgeom.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/distgeom.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:39: warning: ignoring #pragma warning [-Wunknown-pragmas]
#pragma warning(disable : 4244) // warning C4244: '=' : conversion from 'double' to 'float', possible loss of data
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:40: warning: ignoring #pragma warning [-Wunknown-pragmas]
#pragma warning(disable : 4305) // warning C4305: '*=' : truncation from 'double' to 'float'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:526:3: warning: multi-line comment [-Wcomment]
// \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:883:9: warning: multi-line comment [-Wcomment]
// / \
^
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:22:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:22:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:22:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp: In member function 'void OpenBabel::OBDistanceGeometry::Set14Bounds()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:481:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (nbr->GetIdx() == path[a] || nbr->GetIdx() == path[c])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:481:59: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (nbr->GetIdx() == path[a] || nbr->GetIdx() == path[c])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:488:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (nbr->GetIdx() == path[d] || nbr->GetIdx() == path[b])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:488:59: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (nbr->GetIdx() == path[d] || nbr->GetIdx() == path[b])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:502:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (nbr->GetIdx() == path[a] || nbr->GetIdx() == path[c])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:502:59: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (nbr->GetIdx() == path[a] || nbr->GetIdx() == path[c])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:508:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (nbr->GetIdx() == path[d] || nbr->GetIdx() == path[b])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:508:59: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
if (nbr->GetIdx() == path[d] || nbr->GetIdx() == path[b])
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:388:18: warning: unused variable 'i' [-Wunused-variable]
unsigned int i, j;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:388:21: warning: unused variable 'j' [-Wunused-variable]
unsigned int i, j;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:428:19: warning: unused variable 'bond_id' [-Wunused-variable]
OBStereo::Ref bond_id;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp: In member function 'OpenBabel::OBCisTransStereo* OpenBabel::OBDistanceGeometry::GetCisTransStereo(OpenBabel::OBBond*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:586:19: warning: unused variable 'bond_id' [-Wunused-variable]
OBStereo::Ref bond_id;
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp: In member function 'void OpenBabel::OBDistanceGeometry::Set15Bounds()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:616:18: warning: unused variable 'i' [-Wunused-variable]
unsigned int i, j;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:616:21: warning: unused variable 'j' [-Wunused-variable]
unsigned int i, j;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp: In member function 'void OpenBabel::OBDistanceGeometry::TriangleSmooth(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:747:9: warning: unused variable 'loopCount' [-Wunused-variable]
int loopCount = 0;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp: In member function 'void OpenBabel::OBDistanceGeometry::AddConformer()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:1107:27: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (a->GetIdx() == origin || a->GetIdx() == second || a->GetIdx() == third)
~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:1107:52: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (a->GetIdx() == origin || a->GetIdx() == second || a->GetIdx() == third)
~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:1107:77: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (a->GetIdx() == origin || a->GetIdx() == second || a->GetIdx() == third)
~~~~~~~~~~~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:1041:18: warning: unused variable 'attempts' [-Wunused-variable]
unsigned int attempts = 0;
^~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:22:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<float, 10000, 10000>; Derived2 = Eigen::Matrix<float, 10000, 10000>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<float, 10000, 10000>; Derived = Eigen::Matrix<float, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<float, 10000, 10000>; OtherDerived = Eigen::Matrix<float, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<float, 10000, 10000>; _Scalar = float; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = float; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/distgeom.cpp:49:38: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
const int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0), size);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/tetraplanar.cpp
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[ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/cistrans.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/math/spacegroup.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/spacegroup.cpp
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[ 21%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/tetrahedral.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/squareplanar.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/facade.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/facade.cpp
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[ 18%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/depict/depict.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp: In function 'unsigned int OpenBabel::GetAtomSymClass(OpenBabel::OBAtom*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp:280:11: warning: unused variable 'nclasses' [-Wunused-variable]
int nclasses = end_pos - copy_sym.begin();
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp: In member function 'virtual void OpenBabel::OBDepictPrivate::DrawAtomLabel(const string&, int, const OpenBabel::vector3&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp:966:21: warning: variable 'metrics' set but not used [-Wunused-but-set-variable]
OBFontMetrics metrics = painter->GetFontMetrics(str);
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp:971:21: warning: variable 'metrics' set but not used [-Wunused-but-set-variable]
OBFontMetrics metrics = painter->GetFontMetrics(subscript);
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp: In member function 'bool OpenBabel::OBDepict::DrawMolecule(OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp:423:25: warning: 'max_z' may be used uninitialized in this function [-Wmaybe-uninitialized]
d->zScale = max_z - min_z;
~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp:423:25: warning: 'min_z' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp:421:22: warning: 'max_y' may be used uninitialized in this function [-Wmaybe-uninitialized]
height = max_y - min_y + 2*margin;
~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp:421:22: warning: 'min_y' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp:420:22: warning: 'max_x' may be used uninitialized in this function [-Wmaybe-uninitialized]
width = max_x - min_x + 2*margin;
~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/depict.cpp:420:22: warning: 'min_x' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 19%] Building CXX object src/CMakeFiles/openbabel.dir/math/align.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/math/align.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:24:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:24:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:24:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
In file included from /usr/include/eigen2/Eigen/Array:28,
from /usr/include/eigen2/Eigen/Geometry:8,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:29:
/usr/include/eigen2/Eigen/src/Array/Functors.h:266:31: warning: 'template<class _Operation> class std::binder2nd' is deprecated [-Wdeprecated-declarations]
struct ei_functor_traits<std::binder2nd<T> >
^~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_function.h:1368,
from /usr/include/c++/8/string:48,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:22,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:24:
/usr/include/c++/8/backward/binders.h:143:11: note: declared here
class binder2nd
^~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Array:28,
from /usr/include/eigen2/Eigen/Geometry:8,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:29:
/usr/include/eigen2/Eigen/src/Array/Functors.h:270:31: warning: 'template<class _Operation> class std::binder1st' is deprecated [-Wdeprecated-declarations]
struct ei_functor_traits<std::binder1st<T> >
^~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_function.h:1368,
from /usr/include/c++/8/string:48,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:22,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:24:
/usr/include/c++/8/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp: In member function 'std::vector<OpenBabel::vector3> OpenBabel::OBAlign::GetAlignment()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:399:45: warning: comparison of integer expressions of different signedness: 'std::vector<OpenBabel::vector3>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
for (vector<vector3>::size_type i=0; i<mtarget.cols(); ++i)
~^~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:131,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:24:
/usr/include/eigen2/Eigen/src/Core/Matrix.h: In instantiation of 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, 3, 3>, const Eigen::Transpose<Eigen::Matrix<double, 3, 3> >&, 0>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]':
/usr/include/eigen2/Eigen/src/Core/Matrix.h:283:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Matrix<double, 3, 3>, const Eigen::Transpose<Eigen::Matrix<double, 3, 3> >&, 0>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:283:62: required from here
/usr/include/eigen2/Eigen/src/Core/Matrix.h:533:58: warning: enum constant in boolean context [-Wint-in-bool-context]
_set_selector(other.derived(), typename ei_meta_if<bool(cond), ei_meta_true, ei_meta_false>::ret());
^~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/Matrix.h: In instantiation of 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Matrix<double, 10000, 10000>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]':
/usr/include/eigen2/Eigen/src/Core/Matrix.h:283:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Matrix<double, 10000, 10000>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:286:40: required from here
/usr/include/eigen2/Eigen/src/Core/Matrix.h:533:58: warning: enum constant in boolean context [-Wint-in-bool-context]
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:24:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000>; Derived2 = Eigen::Matrix<double, 10000, 10000>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000>; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:193:46: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
const int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0), size);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000>; Derived2 = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Matrix<double, 10000, 10000>, Eigen::Matrix<double, 10000, 10000> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Matrix<double, 10000, 10000>, Eigen::Matrix<double, 10000, 10000> >; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Matrix<double, 10000, 10000>, Eigen::Matrix<double, 10000, 10000> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Matrix<double, 10000, 10000>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Matrix<double, 10000, 10000>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:288:43: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000>; Derived2 = Eigen::CwiseUnaryOp<Eigen::ei_scalar_square_op<double>, Eigen::Matrix<double, 10000, 10000> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::ei_scalar_square_op<double>, Eigen::Matrix<double, 10000, 10000> >; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::CwiseUnaryOp<Eigen::ei_scalar_square_op<double>, Eigen::Matrix<double, 10000, 10000> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::ei_scalar_square_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::ei_scalar_square_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:292:52: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>; Derived2 = Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >; Derived = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>; OtherDerived = Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 3; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 3; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/MatrixBase.h:492:41: required from 'const typename Eigen::ei_eval<T>::type Eigen::MatrixBase<Derived>::eval() const [with Derived = Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >; typename Eigen::ei_eval<T>::type = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Transpose.h:203:9: required from 'static void Eigen::ei_inplace_transpose_selector<MatrixType, false>::run(MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Transpose.h:224:46: required from 'void Eigen::MatrixBase<Derived>::transposeInPlace() [with Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:404:31: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>; Derived2 = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>; Derived = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>; OtherDerived = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 3; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 3; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/MatrixBase.h:492:55: required from 'const typename Eigen::ei_eval<T>::type Eigen::MatrixBase<Derived>::eval() const [with Derived = Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >; typename Eigen::ei_eval<T>::type = Eigen::Matrix<double, 10000, 10000, 3, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Transpose.h:203:9: required from 'static void Eigen::ei_inplace_transpose_selector<MatrixType, false>::run(MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Transpose.h:224:46: required from 'void Eigen::MatrixBase<Derived>::transposeInPlace() [with Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:404:31: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000>; Derived2 = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:541:95: required from 'void Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_selector(const OtherDerived&, const Eigen::ei_meta_false&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:533:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:283:24: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/eigen2/Eigen/src/Core/CwiseNullaryOp.h:402:10: required from 'Derived& Eigen::MatrixBase<Derived>::setZero() [with Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:760:5: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&; Rhs = const Eigen::Matrix<double, 10000, 10000>&; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Matrix<double, 10000, 10000>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Matrix<double, 10000, 10000>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Matrix<double, 10000, 10000>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/math/align.cpp:403:54: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 21%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/openbabel.dir/stereo/perception.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp: In function 'bool OpenBabel::TetStereoToWedgeHash(OpenBabel::OBMol&, std::map<OpenBabel::OBBond*, OpenBabel::OBStereo::BondDirection>&, std::map<OpenBabel::OBBond*, long unsigned int>&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp:2780:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (score > max_bond_score) {
~~~~~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp:2712:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
for (std::vector<OBGenericData*>::iterator data = vdata.begin(); data != vdata.end(); ++data)
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp:2849:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
return true;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp: In function 'void OpenBabel::StereoRefToImplicit(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp:2871:16: warning: 'template<class _Operation> class std::binder1st' is deprecated [-Wdeprecated-declarations]
const std::binder1st<std::equal_to<OBStereo::Ref> > equal_to_atomId = std::bind1st (equal_to<OBStereo::Ref>(), atomId);
^~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_function.h:1368,
from /usr/include/c++/8/bits/stl_tree.h:65,
from /usr/include/c++/8/map:60,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/base.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/stereo/stereo.h:27,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/stereo/tetranonplanar.h:27,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/stereo/tetrahedral.h:27,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp:25:
/usr/include/c++/8/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp: In function 'void OpenBabel::ImplicitRefToStereo(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref, OpenBabel::OBStereo::Ref)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp:2903:16: warning: 'template<class _Operation> class std::binder1st' is deprecated [-Wdeprecated-declarations]
const std::binder1st<std::equal_to<OBStereo::Ref> > equal_to_implicitRef = std::bind1st (equal_to<OBStereo::Ref>(), (OBStereo::Ref) OBStereo::ImplicitRef);
^~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_function.h:1368,
from /usr/include/c++/8/bits/stl_tree.h:65,
from /usr/include/c++/8/map:60,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/base.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/stereo/stereo.h:27,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/stereo/tetranonplanar.h:27,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/stereo/tetrahedral.h:27,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/stereo/perception.cpp:25:
/usr/include/c++/8/backward/binders.h:108:11: note: declared here
class binder1st
^~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xmlformat.dir/link.txt --verbose=1
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/xtcformat.dir/depend.internal".
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Scanning dependencies of target xtcformat
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[ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/addpolarh.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp: In member function 'virtual bool OpenBabel::CMLReactFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp:516:12: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(i=0;i<pReact->NumReactants();i++)
~^~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp:538:12: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(i=0;i<pReact->NumProducts();i++)
~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp: In member function 'bool OpenBabel::CMLReactFormat::WriteRateData(OpenBabel::OBReaction*, xmlChar*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp:702:9: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch]
switch(pRD->ReactionType)
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp:730:9: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch]
switch(pRD->ReactionType)
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp:730:9: warning: enumeration value 'SRI' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp: In member function 'void OpenBabel::CMLReactFormat::WriteMetadataList(OpenBabel::OBReaction&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlreactformat.cpp:769:26: warning: unused variable 'C_TITLE' [-Wunused-variable]
static const xmlChar C_TITLE[] = "title";
^~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/none.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/none.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/descriptors/filters.cpp
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[ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/addnonpolarh.cpp
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[ 22%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/fingerprints/finger3.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/fingerprints/finger3.cpp: In member function 'virtual bool OpenBabel::PatternFP::GetFingerprint(OpenBabel::OBBase*, std::vector<unsigned int>&, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/fingerprints/finger3.cpp:108:13: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
while(n < _bitcount)
~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/fingerprints/finger3.cpp: In member function 'virtual std::__cxx11::string OpenBabel::PatternFP::DescribeBits(std::vector<unsigned int>, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/fingerprints/finger3.cpp:257:34: warning: operation on 'div' may be undefined [-Wsequence-point]
ngrp = (num + div -1)/div--; //rounds up
~~~^~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxtcformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/xtcformat.dir/xtcformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp: In member function 'virtual bool OpenBabel::XTCFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:152:18: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (natoms != mol.NumAtoms()) {
~~~~~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp: In member function 'int OpenBabel::XTCFormat::sizeofint(int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:394:17: warning: comparison of integer expressions of different signedness: 'const int' and 'unsigned int' [-Wsign-compare]
while (size >= num && num_of_bits < 32) {
~~~~~^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp: In member function 'int OpenBabel::XTCFormat::sizeofints(int, unsigned int*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:434:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
while (bytes[num_of_bytes] >= num) {
~~~~~~~~~~~~~~~~~~~~^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp: In member function 'void OpenBabel::XTCFormat::sendints(int*, int, int, unsigned int*, unsigned int*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:489:21: warning: comparison of integer expressions of different signedness: 'const int' and 'unsigned int' [-Wsign-compare]
if (num_of_bits >= num_of_bytes * 8) {
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:490:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for (i = 0; i < num_of_bytes; i++) {
~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:495:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for (i = 0; i < num_of_bytes-1; i++) {
~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp: In member function 'int OpenBabel::XTCFormat::receivebits(int*, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:530:20: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (lastbits < num_of_bits) {
~~~~~~~~~^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp: In member function 'int OpenBabel::XTCFormat::xdr3dfcoord(XDR*, float*, int*, float*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:771:23: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:977:37: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
thiscoord[2] = receivebits(buf, bitsizeint[2]);
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:976:37: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
thiscoord[1] = receivebits(buf, bitsizeint[1]);
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:975:37: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
thiscoord[0] = receivebits(buf, bitsizeint[0]);
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:788:30: warning: 'prevcoord[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
abs(thiscoord[2] - prevcoord[2]) < larger) {
~~~~~~~~~~~~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xtcformat.cpp:787:30: warning: 'prevcoord[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
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~~~~~~~~~~~~~^~~~~~~~~~~~~~
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In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/descriptors/inchidescriptor.cpp:24:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h: In member function 'bool OpenBabel::InChIFormat::InchiLess::operator()(const string&, const string&) const':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:150:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while(p1!=s1.end() && isdigit(*p1++)); --p1;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:150:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while(p1!=s1.end() && isdigit(*p1++)); --p1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:155:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while(p2!=s2.end() && isdigit(*p2++)); --p2;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:155:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while(p2!=s2.end() && isdigit(*p2++)); --p2;
^~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcmlformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp: In member function 'bool OpenBabel::CMLFormat::DoHCounts()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp:929:27: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(unsigned i=0;i<iter->second - explH;++i)
~^~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp: In member function 'void OpenBabel::CMLFormat::WriteMetadataList(OpenBabel::OBMol&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp:1232:26: warning: unused variable 'C_TITLE' [-Wunused-variable]
static const xmlChar C_TITLE[] = "title";
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp: In member function 'std::__cxx11::string OpenBabel::CMLFormat::getTimestr()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp:1282:12: warning: variable 'time_res' set but not used [-Wunused-but-set-variable]
size_t time_res; /* Result of strftime */
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp: In member function 'virtual bool OpenBabel::CMLFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp:1329:26: warning: unused variable 'C_DESCRIPTION' [-Wunused-variable]
static const xmlChar C_DESCRIPTION[] = "description";
^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp: In member function 'bool OpenBabel::CMLFormat::WriteVibrationData(OpenBabel::OBMol&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/cmlformat.cpp:2289:26: warning: unused variable 'C_SCALAR' [-Wunused-variable]
static const xmlChar C_SCALAR[] = "scalar";
^~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/viewmolformat.dir/depend.internal".
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Scanning dependencies of target viewmolformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/changecell.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/changecell.cpp: In member function 'virtual bool OpenBabel::OpChangeCell::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/changecell.cpp:83:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OpChangeCell::vc_val>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int i = 0; i < vcvs.size(); i++)
~~^~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/changecell.cpp:114:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OpChangeCell::vc_val>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int i = 0; i < vcvs.size(); i++)
~~^~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/fromfile.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/fromfile.cpp: In member function 'virtual bool OpenBabel::FromFileCharges::ComputeCharges(OpenBabel::OBMol&, const char*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/fromfile.cpp:96:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for ( int i = 1; i <= mol.NumAtoms(); i++)
~~^~~~~~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/eqeq.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dchemdoodlejsonformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/chemdoodlejsonformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/chemdoodlejsonformat.cpp: In member function 'virtual bool OpenBabel::ChemDoodleJSONFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/chemdoodlejsonformat.cpp:103:30: warning: comparison of integer expressions of different signedness: 'Json::Value::ArrayIndex' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (inRoot["m"].size() > currentMolIndex) {
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
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patom->SetVector(x,y,z);
~~~~~~~~~~~~~~~~^~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxyzformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/xyzformat.dir/xyzformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xyzformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dviewmolformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/viewmolformat.cpp
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemdrawcdx.cpp: In member function 'bool OpenBabel::ChemDrawBinaryXFormat::DoReaction(OpenBabel::CDXReader&, OpenBabel::OBReaction*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemdrawcdx.cpp:331:25: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(unsigned i=0;i<cdxr.GetLen()/4;++i)//for each reactant id
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemdrawcdx.cpp:343:25: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(unsigned i=0;i<cdxr.GetLen()/4;++i)//for each product id
~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemdrawcdx.cpp: In member function 'bool OpenBabel::ChemDrawBinaryXFormat::DoFragment(OpenBabel::CDXReader&, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemdrawcdx.cpp:435:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for(int idx=1; idx<=pmol->NumAtoms();++idx)
~~~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemdrawcdx.cpp: In member function 'bool OpenBabel::ChemDrawBinaryXFormat::DoFragmentImpl(OpenBabel::CDXReader&, OpenBabel::OBMol*, std::map<int, unsigned int>&, std::map<OpenBabel::OBBond*, OpenBabel::OBStereo::BondDirection>&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemdrawcdx.cpp:454:27: warning: variable 'hasElement' set but not used [-Wunused-but-set-variable]
bool isAlias=false, hasElement=false;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemdrawcdx.cpp:591:28: warning: 'endIdx' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(!order || !bgnIdx || !endIdx)
~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemdrawcdx.cpp:591:17: warning: 'bgnIdx' may be used uninitialized in this function [-Wmaybe-uninitialized]
if(!order || !bgnIdx || !endIdx)
~~~~~~~^~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pcmodelformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pcmodelformat.dir/depend.internal".
Scanning dependencies of target pcmodelformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm -lxml2 ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/outformat.dir/depend.internal".
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Scanning dependencies of target outformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/delnonpolarh.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldghemical.cpp
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[ 29%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dyasaraformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp: In function 'OpenBabel::mobatom* OpenBabel::mob_next(OpenBabel::mobatom*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp:39:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
#define mem_inc(POINTER,INC) (*((char**)&(POINTER))+=(INC))
~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp:221:3: note: in expansion of macro 'mem_inc'
{ mem_inc(atom,mob_atomsize(atom));
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp: In member function 'virtual bool OpenBabel::YOBFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp:368:21: warning: variable 'reslen' set but not used [-Wunused-but-set-variable]
int /*samenames,*/reslen,charged;
^~~~~~
In file included from /usr/include/string.h:507,
from /usr/include/c++/8/cstring:42,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/data.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:45,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp:34:
In function 'void* memcpy(void*, const void*, size_t)',
inlined from 'virtual bool OpenBabel::YOBFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)' at /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp:432:82:
/usr/include/bits/string_fortified.h:34:33: warning: 'void* __builtin_memcpy(void*, const void*, long unsigned int)' accessing 4 bytes at offsets 0 and 1 overlaps 3 bytes at offset 1 [-Wrestrict]
return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp: In member function 'virtual bool OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp:562:32: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=]
snprintf(&buffer[12], 4, "%4d",res->GetNum()); }
^~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/yasaraformat.cpp:34:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 5 and 12 bytes into a destination of size 4
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/yasaraformat.so CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/opendxformat.dir/depend.internal".
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmsmsformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/msmsformat.dir/msmsformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msmsformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msmsformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/msiformat.dir/depend.internal".
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dopendxformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/opendxformat.dir/opendxformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/opendxformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dchemdoodlejsonformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/chemdoodlejsonformat.dir/json/customwriter.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp: In member function 'void Json::CustomWriter::writeValue(const Json::Value&, std::__cxx11::string&, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp:83:34: warning: comparison of integer expressions of different signedness: 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (valLine.length() > maxWidth_)
~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp:96:36: warning: comparison of integer expressions of different signedness: 'int' and 'Json::Value::ArrayIndex' {aka 'unsigned int'} [-Wsign-compare]
for ( int index =0; index < value.size(); ++index )
~~~~~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp:104:24: warning: comparison of integer expressions of different signedness: 'int' and 'Json::Value::ArrayIndex' {aka 'unsigned int'} [-Wsign-compare]
if ( index < value.size()-1 )
~~~~~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp:123:34: warning: comparison of integer expressions of different signedness: 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (valLine.length() > maxWidth_)
~~~~~~~~~~~~~~~~~^~~~~~~~~~~
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[ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/fillUC.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mpqcformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mpqcformat.dir/depend.internal".
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdoodlejsonformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/chemdoodlejsonformat.so CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o CMakeFiles/chemdoodlejsonformat.dir/json/jsoncpp.cpp.o CMakeFiles/chemdoodlejsonformat.dir/json/customwriter.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mpdformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mpdformat.dir/depend.internal".
Scanning dependencies of target mpdformat
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[ 32%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Drsmiformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/rsmiformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pointcloudformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pointcloudformat.dir/depend.internal".
Scanning dependencies of target pointcloudformat
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[ 30%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpdbqtformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp: In function 'bool OpenBabel::OutputTree(OpenBabel::OBConversion*, OpenBabel::OBMol&, std::ostream&, std::map<unsigned int, OpenBabel::branch>&, unsigned int, bool, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp:580:20: warning: unused variable 'child' [-Wunused-variable]
unsigned int child=i;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp: In function 'bool OpenBabel::Separate_preserve_charges(OpenBabel::OBMol&, std::vector<OpenBabel::OBMol>&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp:794:9: warning: unused variable 'fragments' [-Wunused-variable]
int fragments = 0;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp: At global scope:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp:747:16: warning: 'unsigned int OpenBabel::AtomsSoFar(const std::map<unsigned int, OpenBabel::branch>&, unsigned int)' defined but not used [-Wunused-function]
unsigned int AtomsSoFar(const map <unsigned int, branch> & tree, unsigned int depth)
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp: In function 'void OpenBabel::OutputAtom(OpenBabel::OBAtom*, std::ostream&, unsigned int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp:334:46: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=]
snprintf(type_name, sizeof(type_name), " %-3s", tmp);
^~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp:24:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp:351:54: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=]
snprintf(padded_name, sizeof(padded_name), " %-3s", tmp);
^~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbqtformat.cpp:24:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 35%] Linking CXX shared module ../../lib64/pdbqtformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 35%] Built target pdbqtformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mmcifformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mmcifformat.dir/depend.internal".
Scanning dependencies of target mmcifformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 32%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmsiformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/msiformat.dir/msiformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msiformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msiformat.cpp: In member function 'virtual bool OpenBabel::MSIFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msiformat.cpp:71:17: warning: unused variable 'title' [-Wunused-variable]
const char* title = pConv->GetTitle();
^~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:51,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msiformat.cpp:15:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/generic.h:366:60: warning: 'sg' may be used uninitialized in this function [-Wmaybe-uninitialized]
void SetSpaceGroup(const SpaceGroup* sg) { _spaceGroup = sg; }
~~~~~~~~~~~~^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msiformat.cpp:106:23: note: 'sg' was declared here
const SpaceGroup *sg;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msiformat.cpp:189:28: warning: 'atom' may be used uninitialized in this function [-Wmaybe-uninitialized]
atom->SetVector(atof(vs[3].c_str()),
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
atof(vs[4].c_str()),
~~~~~~~~~~~~~~~~~~~~
atof(vs[5].c_str()));
~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msiformat.cpp:235:24: warning: 'bondOrder' may be used uninitialized in this function [-Wmaybe-uninitialized]
mol.AddBond(startBondAtom - 1, endBondAtom - 1, bondOrder);
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msiformat.cpp:235:56: warning: 'endBondAtom' may be used uninitialized in this function [-Wmaybe-uninitialized]
mol.AddBond(startBondAtom - 1, endBondAtom - 1, bondOrder);
~~~~~~~~~~~~^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/msiformat.cpp:235:39: warning: 'startBondAtom' may be used uninitialized in this function [-Wmaybe-uninitialized]
mol.AddBond(startBondAtom - 1, endBondAtom - 1, bondOrder);
~~~~~~~~~~~~~~^~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 33%] Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmpqcformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mpqcformat.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 36%] Linking CXX shared module ../../lib64/msiformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/msiformat.so CMakeFiles/msiformat.dir/msiformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 36%] Built target msiformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 34%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmpdformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/mpdformat.dir/mpdformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mpdformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mpdformat.cpp: In member function 'virtual bool OpenBabel::MPDFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mpdformat.cpp:204:42: warning: variable 'idx_true' set but not used [-Wunused-but-set-variable]
bool xml_true=false, pre_true=false, idx_true=false;
^~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mdffformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mdffformat.dir/depend.internal".
Scanning dependencies of target mdffformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 33%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/forcefield.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/forcefield.cpp: In member function 'virtual bool OpenBabel::OpMinimize::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/forcefield.cpp:235:10: warning: unused variable 'done' [-Wunused-variable]
bool done = true;
^~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 36%] Linking CXX shared module ../../lib64/mpqcformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 36%] Built target mpqcformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/xedformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/xedformat.dir/depend.internal".
Scanning dependencies of target xedformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 36%] Linking CXX shared module ../../lib64/mpdformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 36%] Built target mpdformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/lpmdformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/lpmdformat.dir/depend.internal".
Scanning dependencies of target lpmdformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 28%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
In file included from /usr/include/eigen2/Eigen/SVD:23,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:30,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/SVD/SVD.h: In instantiation of 'bool Eigen::SVD<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:335:39: required from here
/usr/include/eigen2/Eigen/src/SVD/SVD.h:528:13: warning: unused variable 'rows' [-Wunused-variable]
const int rows = m_matU.rows();
^~~~
In file included from /usr/include/eigen2/Eigen/Core:155,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_colmajor_times_vector(int, const Scalar*, int, const RhsType&, Scalar*) [with Scalar = double; RhsType = Eigen::Matrix<double, 4, 1>]':
/usr/include/eigen2/Eigen/src/Core/SolveTriangular.h:189:56: required from 'static void Eigen::ei_solve_triangular_selector<Lhs, Rhs, UpLo, 0>::run(const Lhs&, Rhs&) [with Lhs = Eigen::Flagged<Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>, 2304, 0>; Rhs = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>; int UpLo = 2048]'
/usr/include/eigen2/Eigen/src/Core/SolveTriangular.h:248:81: required from 'void Eigen::MatrixBase<Derived>::solveTriangularInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>; Derived = Eigen::Flagged<Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>, 2304, 0>]'
/usr/include/eigen2/Eigen/src/LU/LU.h:499:3: required from 'bool Eigen::LU<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:313:39: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:420:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:421:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:195:41: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
const int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0), size);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Matrix<double, 10000, 1>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 1>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:195:41: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000>; Derived2 = Eigen::Matrix<double, 10000, 10000>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000>; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:263:51: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:317:28: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<int, 10000, 1>; Derived2 = Eigen::Matrix<int, 10000, 1>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<int, 10000, 1>; Derived = Eigen::Matrix<int, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<int, 10000, 1>; OtherDerived = Eigen::Matrix<int, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<int, 10000, 1>; _Scalar = int; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = int; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/LU/LU.h:60:37: required from 'const Eigen::LU<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::lu() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:313:26: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<int, 1, 10000>; Derived2 = Eigen::Matrix<int, 1, 10000>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<int, 1, 10000>; Derived = Eigen::Matrix<int, 1, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<int, 1, 10000>; OtherDerived = Eigen::Matrix<int, 1, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<int, 1, 10000>; _Scalar = int; int _Rows = 1; int _Cols = 10000; int _Options = 2; int _MaxRows = 1; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = int; int _Rows = 1; int _Cols = 10000; int _Options = 2; int _MaxRows = 1; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/LU/LU.h:60:37: required from 'const Eigen::LU<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::lu() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:313:26: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000>; Derived2 = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:541:95: required from 'void Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_selector(const OtherDerived&, const Eigen::ei_meta_false&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:533:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:283:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:192:39: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
In file included from /usr/include/eigen2/Eigen/Core:155,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_rowmajor_times_vector(const Scalar*, int, const Scalar*, int, ResType&) [with Scalar = double; ResType = Eigen::Matrix<double, 10000, 1>]':
/usr/include/eigen2/Eigen/src/Core/Product.h:679:52: required from 'static void Eigen::ei_cache_friendly_product_selector<ProductType, LhsRows, 1, 32, 1, RhsOrder, RhsAccess>::run(DestDerived&, const ProductType&) [with DestDerived = Eigen::Matrix<double, 10000, 1>; ProductType = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; int LhsRows = 10000; int RhsOrder = 0; int RhsAccess = 32]'
/usr/include/eigen2/Eigen/src/Core/Product.h:761:84: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:534:53: required from 'bool Eigen::SVD<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:335:39: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:609:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:610:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_colmajor_times_vector(int, const Scalar*, int, const RhsType&, Scalar*) [with Scalar = double; RhsType = Eigen::Matrix<double, 10000, 1>]':
/usr/include/eigen2/Eigen/src/Core/Product.h:590:52: required from 'static void Eigen::ei_cache_friendly_product_selector<ProductType, LhsRows, 0, 32, 1, RhsOrder, RhsAccess>::run(DestDerived&, const ProductType&) [with DestDerived = Eigen::Matrix<double, 10000, 1>; ProductType = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; int LhsRows = 10000; int RhsOrder = 0; int RhsAccess = 32]'
/usr/include/eigen2/Eigen/src/Core/Product.h:761:84: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Matrix<double, 10000, 10000>&; Rhs = const Eigen::Matrix<double, 10000, 1>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; Rhs = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; Derived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:317:28: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:420:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:421:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Matrix<double, 10000, 10000>&; Rhs = const Eigen::Matrix<double, 10000, 1>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; Rhs = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; Derived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:317:28: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:377:74: warning: enum constant in boolean context [-Wint-in-bool-context]
int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0,0), innerSize);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:137,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Product.h: In instantiation of 'const PacketScalar Eigen::Product<Lhs, Rhs, ProductMode>::packet(int, int) const [with int LoadMode = 1; LhsNested = const Eigen::Matrix<double, 10000, 10000>&; RhsNested = const Eigen::Matrix<double, 10000, 1>&; int ProductMode = 0; Eigen::Product<Lhs, Rhs, ProductMode>::PacketScalar = __vector(2) double]':
/usr/include/eigen2/Eigen/src/Core/Coeffs.h:362:3: required from 'void Eigen::MatrixBase<Derived>::copyPacket(int, int, const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>; int StoreMode = 0; int LoadMode = 1; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:397:11: required from 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Matrix<double, 10000, 10000>&; Rhs = const Eigen::Matrix<double, 10000, 1>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; Rhs = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; Derived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:317:28: required from here
/usr/include/eigen2/Eigen/src/Core/Product.h:260:14: warning: ignoring attributes on template argument 'Eigen::MatrixBase<Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0> >::PacketScalar' {aka '__vector(2) double'} [-Wignored-attributes]
ei_product_packet_impl<Flags&RowMajorBit ? RowMajor : ColMajor,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Unroll ? InnerSize-1 : Dynamic,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_LhsNested, _RhsNested, PacketScalar, LoadMode>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
::run(row, col, m_lhs, m_rhs, res);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:155,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_colmajor_times_vector(int, const Scalar*, int, const RhsType&, Scalar*) [with Scalar = double; RhsType = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>]':
/usr/include/eigen2/Eigen/src/Core/Product.h:590:52: required from 'static void Eigen::ei_cache_friendly_product_selector<ProductType, LhsRows, 0, 32, 1, RhsOrder, RhsAccess>::run(DestDerived&, const ProductType&) [with DestDerived = Eigen::Matrix<double, 10000, 1>; ProductType = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; int LhsRows = 10000; int RhsOrder = 0; int RhsAccess = 32]'
/usr/include/eigen2/Eigen/src/Core/Product.h:761:84: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; Rhs = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/include/eigen2/Eigen/src/Core/MapBase.h:188:41: required from 'Derived& Eigen::MapBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 10000; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/LU/LU.h:505:7: required from 'bool Eigen::LU<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:313:39: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:420:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:421:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; Rhs = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/include/eigen2/Eigen/src/Core/MapBase.h:188:41: required from 'Derived& Eigen::MapBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 10000; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/LU/LU.h:505:7: required from 'bool Eigen::LU<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:313:39: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:377:74: warning: enum constant in boolean context [-Wint-in-bool-context]
int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0,0), innerSize);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:137,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Product.h: In instantiation of 'const PacketScalar Eigen::Product<Lhs, Rhs, ProductMode>::packet(int, int) const [with int LoadMode = 1; LhsNested = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; RhsNested = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&; int ProductMode = 0; Eigen::Product<Lhs, Rhs, ProductMode>::PacketScalar = __vector(2) double]':
/usr/include/eigen2/Eigen/src/Core/Coeffs.h:362:3: required from 'void Eigen::MatrixBase<Derived>::copyPacket(int, int, const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>; int StoreMode = 0; int LoadMode = 1; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:397:11: required from 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; Rhs = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/include/eigen2/Eigen/src/Core/MapBase.h:188:41: required from 'Derived& Eigen::MapBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 10000; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/LU/LU.h:505:7: required from 'bool Eigen::LU<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:313:39: required from here
/usr/include/eigen2/Eigen/src/Core/Product.h:260:14: warning: ignoring attributes on template argument 'Eigen::MatrixBase<Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0> >::PacketScalar' {aka '__vector(2) double'} [-Wignored-attributes]
ei_product_packet_impl<Flags&RowMajorBit ? RowMajor : ColMajor,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Unroll ? InnerSize-1 : Dynamic,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_LhsNested, _RhsNested, PacketScalar, LoadMode>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
::run(row, col, m_lhs, m_rhs, res);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:155,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_colmajor_times_vector(int, const Scalar*, int, const RhsType&, Scalar*) [with Scalar = double; RhsType = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>]':
/usr/include/eigen2/Eigen/src/Core/Product.h:590:52: required from 'static void Eigen::ei_cache_friendly_product_selector<ProductType, LhsRows, 0, 32, 1, RhsOrder, RhsAccess>::run(DestDerived&, const ProductType&) [with DestDerived = Eigen::Matrix<double, 10000, 1>; ProductType = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; int LhsRows = 10000; int RhsOrder = 0; int RhsAccess = 32]'
/usr/include/eigen2/Eigen/src/Core/Product.h:761:84: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/MatrixBase.h:492:41: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/eigen2/Eigen/src/Core/MapBase.h:177:29: required from 'Derived& Eigen::MapBase<Derived>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 1; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:183:25: required from 'void Eigen::SVD<MatrixType>::compute(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:71:7: required from 'Eigen::SVD<MatrixType>::SVD(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:646:10: required from 'Eigen::SVD<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::svd() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:335:26: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:420:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:421:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/MatrixBase.h:492:41: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/eigen2/Eigen/src/Core/MapBase.h:177:29: required from 'Derived& Eigen::MapBase<Derived>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 1; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:183:25: required from 'void Eigen::SVD<MatrixType>::compute(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:71:7: required from 'Eigen::SVD<MatrixType>::SVD(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:646:10: required from 'Eigen::SVD<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::svd() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:335:26: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:377:74: warning: enum constant in boolean context [-Wint-in-bool-context]
int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0,0), innerSize);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:137,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Product.h: In instantiation of 'const PacketScalar Eigen::Product<Lhs, Rhs, ProductMode>::packet(int, int) const [with int LoadMode = 1; LhsNested = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; RhsNested = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; int ProductMode = 0; Eigen::Product<Lhs, Rhs, ProductMode>::PacketScalar = __vector(2) double]':
/usr/include/eigen2/Eigen/src/Core/Coeffs.h:362:3: required from 'void Eigen::MatrixBase<Derived>::copyPacket(int, int, const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>; int StoreMode = 0; int LoadMode = 1; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:397:11: required from 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/eigen2/Eigen/src/Core/MapBase.h:177:29: required from 'Derived& Eigen::MapBase<Derived>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 1; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:183:25: required from 'void Eigen::SVD<MatrixType>::compute(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:71:7: required from 'Eigen::SVD<MatrixType>::SVD(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:646:10: required from 'Eigen::SVD<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::svd() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qeq.cpp:335:26: required from here
/usr/include/eigen2/Eigen/src/Core/Product.h:260:14: warning: ignoring attributes on template argument 'Eigen::MatrixBase<Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0> >::PacketScalar' {aka '__vector(2) double'} [-Wignored-attributes]
ei_product_packet_impl<Flags&RowMajorBit ? RowMajor : ColMajor,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Unroll ? InnerSize-1 : Dynamic,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_LhsNested, _RhsNested, PacketScalar, LoadMode>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
::run(row, col, m_lhs, m_rhs, res);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 35%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pointcloudformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pointcloudformat.cpp: In member function 'virtual bool OpenBabel::PointCloudFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pointcloudformat.cpp:217:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for( int j = 0; j < radius_mult_list.size(); j++ ) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 37%] Linking CXX shared module ../../lib64/pointcloudformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/groformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/groformat.dir/depend.internal".
Scanning dependencies of target groformat
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[ 36%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/gen3d.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/gen3d.cpp:23:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/gen3d.cpp:23:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/distgeom.h:32,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/gen3d.cpp:23:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxedformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/xedformat.dir/xedformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xedformat.cpp
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/xedformat.so CMakeFiles/xedformat.dir/xedformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/groformat.cpp: In member function 'virtual bool OpenBabel::GROFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/groformat.cpp:273:19: warning: 'res' may be used uninitialized in this function [-Wmaybe-uninitialized]
res->AddAtom(atom);
~~~~~~~~~~~~^~~~~~
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp: In member function 'virtual bool OpenBabel::MDFFFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp:241:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::atm_t_prop>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int i = 0; i < atom_t_prop.size(); i++)
~~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp:262:33: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(unsigned int j = 0; j < atom_t_prop[i].num_of_atoms; j++)
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp: In member function 'bool OpenBabel::aindx::operator<(const OpenBabel::aindx&) const':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp:321:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int i = 0; i < vs.size(); i++)
~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp: In member function 'virtual bool OpenBabel::MDFFFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp:380:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int i = 0; i < vs.size(); i++)
~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp:435:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<std::__cxx11::basic_string<char>, unsigned int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0; i < atypes_def.size(); i++)
~~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp:442:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<std::__cxx11::basic_string<char>, unsigned int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0; i < atypes_def.size(); i++)
~~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdffformat.cpp:492:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<std::__cxx11::basic_string<char>, unsigned int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int j = 0; j < atypes_def.size(); j++)
~~^~~~~~~~~~~~~~~~~~~
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lpmdformat.cpp: In member function 'virtual bool OpenBabel::LpmdFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lpmdformat.cpp:190:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if(int(headers.size()-1)!=tokens.size())
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lpmdformat.cpp:204:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int i=1 ; i < headers.size() ; ++i) //the first element is HDR
~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lpmdformat.cpp:237:11: warning: unused variable 'FX' [-Wunused-variable]
double FX = AX/mass; double FY = AY/mass; double FZ = AZ/mass;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lpmdformat.cpp:237:32: warning: unused variable 'FY' [-Wunused-variable]
double FX = AX/mass; double FY = AY/mass; double FZ = AZ/mass;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lpmdformat.cpp:237:53: warning: unused variable 'FZ' [-Wunused-variable]
double FX = AX/mass; double FY = AY/mass; double FZ = AZ/mass;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lpmdformat.cpp: In member function 'virtual bool OpenBabel::LpmdFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lpmdformat.cpp:360:18: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for(int i=0; i < mol.NumAtoms() ; ++i)
~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lpmdformat.cpp:376:15: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for(int i=0;i<mol.NumAtoms();++i)
~^~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 38%] Built target mdffformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal".
Scanning dependencies of target gausscubeformat
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make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/adfformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/adfformat.dir/depend.internal".
Scanning dependencies of target adfformat
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make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 32%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In member function 'virtual bool OpenBabel::OBForceFieldMMFF94::SetupCalculations()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:2790:32: warning: variable 'bondtype1' set but not used [-Wunused-but-set-variable]
int angletype, strbndtype, bondtype1, bondtype2;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:2790:43: warning: variable 'bondtype2' set but not used [-Wunused-but-set-variable]
int angletype, strbndtype, bondtype1, bondtype2;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Bond() [with bool <anonymous> = true]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:288:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:140:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFBondCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0; i < _bondcalculations.size(); ++i) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Bond() [with bool <anonymous> = false]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:288:59: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:140:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFBondCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Angle() [with bool <anonymous> = true]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:294:42: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:255:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFAngleCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0; i < _anglecalculations.size(); ++i) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Angle() [with bool <anonymous> = false]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:294:61: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:255:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFAngleCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_StrBnd() [with bool <anonymous> = true]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:300:43: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:368:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFStrBndCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0; i < _strbndcalculations.size(); ++i) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_StrBnd() [with bool <anonymous> = false]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:300:63: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:368:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFStrBndCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Torsion() [with bool <anonymous> = true]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:306:44: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:504:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFTorsionCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0; i < _torsioncalculations.size(); ++i) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Torsion() [with bool <anonymous> = false]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:306:65: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:504:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFTorsionCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_OOP() [with bool <anonymous> = true]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:312:40: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:602:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFOOPCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0; i < _oopcalculations.size(); ++i) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_OOP() [with bool <anonymous> = false]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:312:57: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:602:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFOOPCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_VDW() [with bool <anonymous> = true]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:318:40: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:699:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFVDWCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0; i < _vdwcalculations.size(); ++i) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_VDW() [with bool <anonymous> = false]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:318:57: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:699:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFVDWCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Electrostatic() [with bool <anonymous> = true]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:324:50: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:785:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFElectrostaticCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i = 0; i < _electrostaticcalculations.size(); ++i) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Electrostatic() [with bool <anonymous> = false]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.h:324:77: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:785:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBFFElectrostaticCalculationMMFF94>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp: In member function 'bool OpenBabel::OBForceFieldMMFF94::PerceiveAromatic()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:1443:30: warning: 'first_rj' may be used uninitialized in this function [-Wmaybe-uninitialized]
ringbond = _mol.GetBond(first_rj, index);
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefieldmmff94.cpp:1443:30: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 38%] Linking CXX shared module ../../lib64/lpmdformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lpmdformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/lpmdformat.so CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/cdxmlformat.dir/depend.internal".
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 38%] Built target gausszmatformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/daltonformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/daltonformat.dir/depend.internal".
Scanning dependencies of target daltonformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 37%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpubchemjsonformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/pubchemjsonformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/pubchemjsonformat.cpp: In member function 'virtual bool OpenBabel::PubChemJSONFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/pubchemjsonformat.cpp:108:41: warning: comparison of integer expressions of different signedness: 'Json::Value::ArrayIndex' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (inRoot["PC_Compounds"].size() > currentMolIndex) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/pubchemjsonformat.cpp:119:42: warning: comparison of integer expressions of different signedness: 'Json::Value::ArrayIndex' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (inRoot["PC_Substances"].size() > currentMolIndex) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 38%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opsplit.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opsplit.cpp: In member function 'virtual bool OpenBabel::OpSplit::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opsplit.cpp:92:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if(!pConv)
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opsplit.cpp:95:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if(pConv->IsFirstInput())
^~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 38%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dadfformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/adfformat.dir/adfformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp: In member function 'bool OpenBabel::OBT41Format::ReadASCII(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:590:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:590:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:603:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:603:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:625:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:625:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:640:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:640:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:655:7: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/adfformat.cpp:655:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while( buf != "Geometry" ) ifs >> buf; cout << buf << endl;
^~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 38%] Linking CXX shared module ../../lib64/adfformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/adfformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/adfformat.so CMakeFiles/adfformat.dir/adfformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 38%] Built target adfformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/asciiformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/asciiformat.dir/depend.internal".
Scanning dependencies of target asciiformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 38%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/xml.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 38%] Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgausscubeformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gausscubeformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gausscubeformat.cpp: In member function 'virtual bool OpenBabel::OBGaussianCubeFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gausscubeformat.cpp:425:25: warning: comparison of integer expressions of different signedness: 'std::vector<OpenBabel::OBGridData*>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
while (vgd.size() < nCubes)
~~~~~~~~~~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gausscubeformat.cpp:472:26: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
while (values.size() < n*nCubes)
~~~~~~~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gausscubeformat.cpp:107:17: warning: unused variable 'title' [-Wunused-variable]
const char* title = pConv->GetTitle();
^~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 37%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
In file included from /usr/include/eigen2/Eigen/SVD:23,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:30,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/SVD/SVD.h: In instantiation of 'bool Eigen::SVD<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:384:39: required from here
/usr/include/eigen2/Eigen/src/SVD/SVD.h:528:13: warning: unused variable 'rows' [-Wunused-variable]
const int rows = m_matU.rows();
^~~~
In file included from /usr/include/eigen2/Eigen/Core:155,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_colmajor_times_vector(int, const Scalar*, int, const RhsType&, Scalar*) [with Scalar = double; RhsType = Eigen::Matrix<double, 4, 1>]':
/usr/include/eigen2/Eigen/src/Core/SolveTriangular.h:189:56: required from 'static void Eigen::ei_solve_triangular_selector<Lhs, Rhs, UpLo, 0>::run(const Lhs&, Rhs&) [with Lhs = Eigen::Flagged<Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>, 2304, 0>; Rhs = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>; int UpLo = 2048]'
/usr/include/eigen2/Eigen/src/Core/SolveTriangular.h:248:81: required from 'void Eigen::MatrixBase<Derived>::solveTriangularInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>; Derived = Eigen::Flagged<Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>, 2304, 0>]'
/usr/include/eigen2/Eigen/src/LU/LU.h:499:3: required from 'bool Eigen::LU<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:362:39: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:420:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:421:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 1> >; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:187:41: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
const int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0), size);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Matrix<double, 10000, 1>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 1>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:187:41: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000>; Derived2 = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::ei_scalar_constant_op<double>, Eigen::Matrix<double, 10000, 10000> >; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:258:42: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000>; Derived2 = Eigen::Matrix<double, 10000, 10000>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000>; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:258:42: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<double>, Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>, Eigen::Matrix<double, 10000, 1> >; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:366:28: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<int, 10000, 1>; Derived2 = Eigen::Matrix<int, 10000, 1>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<int, 10000, 1>; Derived = Eigen::Matrix<int, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<int, 10000, 1>; OtherDerived = Eigen::Matrix<int, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<int, 10000, 1>; _Scalar = int; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = int; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/LU/LU.h:60:37: required from 'const Eigen::LU<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::lu() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:362:26: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<int, 1, 10000>; Derived2 = Eigen::Matrix<int, 1, 10000>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<int, 1, 10000>; Derived = Eigen::Matrix<int, 1, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<int, 1, 10000>; OtherDerived = Eigen::Matrix<int, 1, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<int, 1, 10000>; _Scalar = int; int _Rows = 1; int _Cols = 10000; int _Options = 2; int _MaxRows = 1; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = int; int _Rows = 1; int _Cols = 10000; int _Options = 2; int _MaxRows = 1; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/LU/LU.h:60:37: required from 'const Eigen::LU<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::lu() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:362:26: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
In file included from /usr/include/eigen2/Eigen/Core:155,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_rowmajor_times_vector(const Scalar*, int, const Scalar*, int, ResType&) [with Scalar = double; ResType = Eigen::Matrix<double, 10000, 1>]':
/usr/include/eigen2/Eigen/src/Core/Product.h:679:52: required from 'static void Eigen::ei_cache_friendly_product_selector<ProductType, LhsRows, 1, 32, 1, RhsOrder, RhsAccess>::run(DestDerived&, const ProductType&) [with DestDerived = Eigen::Matrix<double, 10000, 1>; ProductType = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; int LhsRows = 10000; int RhsOrder = 0; int RhsAccess = 32]'
/usr/include/eigen2/Eigen/src/Core/Product.h:761:84: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Transpose<Eigen::Matrix<double, 10000, 10000> >&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:534:53: required from 'bool Eigen::SVD<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:384:39: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:609:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:610:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_colmajor_times_vector(int, const Scalar*, int, const RhsType&, Scalar*) [with Scalar = double; RhsType = Eigen::Matrix<double, 10000, 1>]':
/usr/include/eigen2/Eigen/src/Core/Product.h:590:52: required from 'static void Eigen::ei_cache_friendly_product_selector<ProductType, LhsRows, 0, 32, 1, RhsOrder, RhsAccess>::run(DestDerived&, const ProductType&) [with DestDerived = Eigen::Matrix<double, 10000, 1>; ProductType = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; int LhsRows = 10000; int RhsOrder = 0; int RhsAccess = 32]'
/usr/include/eigen2/Eigen/src/Core/Product.h:761:84: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Matrix<double, 10000, 10000>&; Rhs = const Eigen::Matrix<double, 10000, 1>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; Rhs = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; Derived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:366:28: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:420:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:421:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Matrix<double, 10000, 10000>&; Rhs = const Eigen::Matrix<double, 10000, 1>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; Rhs = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; Derived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:366:28: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:377:74: warning: enum constant in boolean context [-Wint-in-bool-context]
int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0,0), innerSize);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:137,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Product.h: In instantiation of 'const PacketScalar Eigen::Product<Lhs, Rhs, ProductMode>::packet(int, int) const [with int LoadMode = 1; LhsNested = const Eigen::Matrix<double, 10000, 10000>&; RhsNested = const Eigen::Matrix<double, 10000, 1>&; int ProductMode = 0; Eigen::Product<Lhs, Rhs, ProductMode>::PacketScalar = __vector(2) double]':
/usr/include/eigen2/Eigen/src/Core/Coeffs.h:362:3: required from 'void Eigen::MatrixBase<Derived>::copyPacket(int, int, const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>; int StoreMode = 0; int LoadMode = 1; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:397:11: required from 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Matrix<double, 10000, 10000>&; Rhs = const Eigen::Matrix<double, 10000, 1>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; Rhs = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; Derived = Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 1>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:366:28: required from here
/usr/include/eigen2/Eigen/src/Core/Product.h:260:14: warning: ignoring attributes on template argument 'Eigen::MatrixBase<Eigen::Product<const Eigen::Matrix<double, 10000, 10000>&, const Eigen::Matrix<double, 10000, 1>&, 0> >::PacketScalar' {aka '__vector(2) double'} [-Wignored-attributes]
ei_product_packet_impl<Flags&RowMajorBit ? RowMajor : ColMajor,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Unroll ? InnerSize-1 : Dynamic,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_LhsNested, _RhsNested, PacketScalar, LoadMode>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
::run(row, col, m_lhs, m_rhs, res);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:155,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_colmajor_times_vector(int, const Scalar*, int, const RhsType&, Scalar*) [with Scalar = double; RhsType = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>]':
/usr/include/eigen2/Eigen/src/Core/Product.h:590:52: required from 'static void Eigen::ei_cache_friendly_product_selector<ProductType, LhsRows, 0, 32, 1, RhsOrder, RhsAccess>::run(DestDerived&, const ProductType&) [with DestDerived = Eigen::Matrix<double, 10000, 1>; ProductType = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; int LhsRows = 10000; int RhsOrder = 0; int RhsAccess = 32]'
/usr/include/eigen2/Eigen/src/Core/Product.h:761:84: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; Rhs = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/include/eigen2/Eigen/src/Core/MapBase.h:188:41: required from 'Derived& Eigen::MapBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 10000; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/LU/LU.h:505:7: required from 'bool Eigen::LU<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:362:39: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:420:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:421:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; Rhs = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/include/eigen2/Eigen/src/Core/MapBase.h:188:41: required from 'Derived& Eigen::MapBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 10000; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/LU/LU.h:505:7: required from 'bool Eigen::LU<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:362:39: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:377:74: warning: enum constant in boolean context [-Wint-in-bool-context]
int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0,0), innerSize);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:137,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Product.h: In instantiation of 'const PacketScalar Eigen::Product<Lhs, Rhs, ProductMode>::packet(int, int) const [with int LoadMode = 1; LhsNested = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; RhsNested = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&; int ProductMode = 0; Eigen::Product<Lhs, Rhs, ProductMode>::PacketScalar = __vector(2) double]':
/usr/include/eigen2/Eigen/src/Core/Coeffs.h:362:3: required from 'void Eigen::MatrixBase<Derived>::copyPacket(int, int, const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>; int StoreMode = 0; int LoadMode = 1; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:397:11: required from 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:90:47: required from 'Eigen::CwiseBinaryOp<BinaryOp, Lhs, Rhs>::CwiseBinaryOp(const Lhs&, const Rhs&, const BinaryOp&) [with BinaryOp = Eigen::ei_scalar_difference_op<double>; Lhs = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; Rhs = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/CwiseBinaryOp.h:151:10: required from 'const Eigen::CwiseBinaryOp<Eigen::ei_scalar_difference_op<typename Eigen::ei_traits<T>::Scalar>, Derived, OtherDerived> Eigen::MatrixBase<Derived>::operator-(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 0, 32>; typename Eigen::ei_traits<T>::Scalar = double]'
/usr/include/eigen2/Eigen/src/Core/MapBase.h:188:41: required from 'Derived& Eigen::MapBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 10000; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/LU/LU.h:505:7: required from 'bool Eigen::LU<MatrixType>::solve(const Eigen::MatrixBase<OtherDerived>&, ResultType*) const [with OtherDerived = Eigen::Matrix<double, 10000, 1>; ResultType = Eigen::Matrix<double, 10000, 1>; MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:362:39: required from here
/usr/include/eigen2/Eigen/src/Core/Product.h:260:14: warning: ignoring attributes on template argument 'Eigen::MatrixBase<Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 10000, 1, 32>&, 0> >::PacketScalar' {aka '__vector(2) double'} [-Wignored-attributes]
ei_product_packet_impl<Flags&RowMajorBit ? RowMajor : ColMajor,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Unroll ? InnerSize-1 : Dynamic,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_LhsNested, _RhsNested, PacketScalar, LoadMode>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
::run(row, col, m_lhs, m_rhs, res);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:155,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h: In instantiation of 'void Eigen::ei_cache_friendly_product_colmajor_times_vector(int, const Scalar*, int, const RhsType&, Scalar*) [with Scalar = double; RhsType = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>]':
/usr/include/eigen2/Eigen/src/Core/Product.h:590:52: required from 'static void Eigen::ei_cache_friendly_product_selector<ProductType, LhsRows, 0, 32, 1, RhsOrder, RhsAccess>::run(DestDerived&, const ProductType&) [with DestDerived = Eigen::Matrix<double, 10000, 1>; ProductType = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; int LhsRows = 10000; int RhsOrder = 0; int RhsAccess = 32]'
/usr/include/eigen2/Eigen/src/Core/Product.h:761:84: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/MatrixBase.h:492:41: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/eigen2/Eigen/src/Core/MapBase.h:177:29: required from 'Derived& Eigen::MapBase<Derived>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 1; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:183:25: required from 'void Eigen::SVD<MatrixType>::compute(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:71:7: required from 'Eigen::SVD<MatrixType>::SVD(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:646:10: required from 'Eigen::SVD<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::svd() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:384:26: required from here
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:420:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset1 = (FirstAligned && alignmentStep==1?3:1);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/eigen2/Eigen/src/Core/CacheFriendlyProduct.h:421:31: warning: enum constant in boolean context [-Wint-in-bool-context]
int offset3 = (FirstAligned && alignmentStep==1?1:3);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:408:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; _Scalar = double; int _Rows = 10000; int _Cols = 1; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 1]'
/usr/include/eigen2/Eigen/src/Core/MatrixBase.h:492:41: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/eigen2/Eigen/src/Core/MapBase.h:177:29: required from 'Derived& Eigen::MapBase<Derived>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 1; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:183:25: required from 'void Eigen::SVD<MatrixType>::compute(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:71:7: required from 'Eigen::SVD<MatrixType>::SVD(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:646:10: required from 'Eigen::SVD<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::svd() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:384:26: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:377:74: warning: enum constant in boolean context [-Wint-in-bool-context]
int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0,0), innerSize);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/eigen2/Eigen/Core:137,
from /usr/include/eigen2/Eigen/LU:4,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.h:29,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:21:
/usr/include/eigen2/Eigen/src/Core/Product.h: In instantiation of 'const PacketScalar Eigen::Product<Lhs, Rhs, ProductMode>::packet(int, int) const [with int LoadMode = 1; LhsNested = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; RhsNested = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; int ProductMode = 0; Eigen::Product<Lhs, Rhs, ProductMode>::PacketScalar = __vector(2) double]':
/usr/include/eigen2/Eigen/src/Core/Coeffs.h:362:3: required from 'void Eigen::MatrixBase<Derived>::copyPacket(int, int, const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>; int StoreMode = 0; int LoadMode = 1; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:397:11: required from 'static void Eigen::ei_assign_impl<Derived1, Derived2, 2, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 1>; Derived2 = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0>; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Product.h:774:30: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::Product<Lhs, Rhs, 1>&) [with Lhs = const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&; Rhs = const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&; Derived = Eigen::Matrix<double, 10000, 1>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 1>; OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/usr/include/eigen2/Eigen/src/Core/MapBase.h:177:29: required from 'Derived& Eigen::MapBase<Derived>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; Derived = Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>]'
/usr/include/eigen2/Eigen/src/Core/Block.h:227:5: required from 'Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>& Eigen::Block<MatrixType, BlockRows, BlockCols, PacketAccess, 32>::operator=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 1>; MatrixType = Eigen::Matrix<double, 10000, 1>; int BlockRows = 10000; int BlockCols = 1; int PacketAccess = 1]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:183:25: required from 'void Eigen::SVD<MatrixType>::compute(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:71:7: required from 'Eigen::SVD<MatrixType>::SVD(const MatrixType&) [with MatrixType = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/SVD/SVD.h:646:10: required from 'Eigen::SVD<typename Eigen::ei_plain_matrix_type<Derived>::type> Eigen::MatrixBase<Derived>::svd() const [with Derived = Eigen::Matrix<double, 10000, 10000>; typename Eigen::ei_plain_matrix_type<Derived>::type = Eigen::Matrix<double, 10000, 10000>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/charges/qtpie.cpp:384:26: required from here
/usr/include/eigen2/Eigen/src/Core/Product.h:260:14: warning: ignoring attributes on template argument 'Eigen::MatrixBase<Eigen::Product<const Eigen::Block<Eigen::Matrix<double, 10000, 10000>, 10000, 10000, 1, 32>&, const Eigen::Block<Eigen::Matrix<double, 10000, 1>, 10000, 1, 1, 32>&, 0> >::PacketScalar' {aka '__vector(2) double'} [-Wignored-attributes]
ei_product_packet_impl<Flags&RowMajorBit ? RowMajor : ColMajor,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Unroll ? InnerSize-1 : Dynamic,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_LhsNested, _RhsNested, PacketScalar, LoadMode>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
::run(row, col, m_lhs, m_rhs, res);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/chemkinformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/chemkinformat.dir/depend.internal".
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[ 38%] Building CXX object src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Ddaltonformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/daltonformat.dir/daltonformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/daltonformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/daltonformat.cpp: In member function 'virtual bool OpenBabel::DALTONInputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/daltonformat.cpp:142:9: warning: variable 'atomcount' set but not used [-Wunused-but-set-variable]
int atomcount = 0; // for each atom type
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/daltonformat.cpp: In member function 'virtual bool OpenBabel::DALTONInputFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/daltonformat.cpp:306:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if(atom->GetAtomicNum() != atomtype)
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/daltonformat.cpp:326:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if(atom->GetAtomicNum() != atomtype)
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/daltonformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/daltonformat.so CMakeFiles/daltonformat.dir/daltonformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/jaguarformat.dir/depend.internal".
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/optransform.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefielduff.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefielduff.cpp: In instantiation of 'void OpenBabel::OBFFVDWCalculationUFF::Compute() [with bool <anonymous> = true]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefielduff.cpp:470:7: required from 'double OpenBabel::OBForceFieldUFF::E_VDW() [with bool <anonymous> = true]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefielduff.h:192:38: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefielduff.cpp:423:14: warning: unused variable 'ab' [-Wunused-variable]
double ab[3];
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefielduff.cpp: In instantiation of 'void OpenBabel::OBFFVDWCalculationUFF::Compute() [with bool <anonymous> = false]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefielduff.cpp:470:7: required from 'double OpenBabel::OBForceFieldUFF::E_VDW() [with bool <anonymous> = false]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefielduff.h:192:55: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/forcefields/forcefielduff.cpp:423:14: warning: unused variable 'ab' [-Wunused-variable]
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Drxnformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/rxnformat.dir/rxnformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/rxnformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/rxnformat.cpp: In member function 'virtual bool OpenBabel::RXNFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/rxnformat.cpp:228:14: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(i=0;i<pReact->NumReactants();i++)
~^~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/rxnformat.cpp:235:14: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for(i=0;i<pReact->NumProducts();i++)
~^~~~~~~~~~~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dasciiformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/asciipainter.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/asciipainter.cpp: In member function 'virtual void OpenBabel::ASCIIPainter::DrawText(double, double, const string&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/depict/asciipainter.cpp:118:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i=0; i<text.size(); ++i) {
~^~~~~~~~~~~~
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/rxnformat.so CMakeFiles/rxnformat.dir/rxnformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/aoforceformat.dir/depend.internal".
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/asciiformat.so CMakeFiles/asciiformat.dir/asciiformat.cpp.o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp: In member function 'void Json::CustomWriter::writeValue(const Json::Value&, std::__cxx11::string&, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp:83:34: warning: comparison of integer expressions of different signedness: 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (valLine.length() > maxWidth_)
~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp:96:36: warning: comparison of integer expressions of different signedness: 'int' and 'Json::Value::ArrayIndex' {aka 'unsigned int'} [-Wsign-compare]
for ( int index =0; index < value.size(); ++index )
~~~~~~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp:104:24: warning: comparison of integer expressions of different signedness: 'int' and 'Json::Value::ArrayIndex' {aka 'unsigned int'} [-Wsign-compare]
if ( index < value.size()-1 )
~~~~~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/json/customwriter.cpp:123:34: warning: comparison of integer expressions of different signedness: 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (valLine.length() > maxWidth_)
~~~~~~~~~~~~~~~~~^~~~~~~~~~~
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/alchemyformat.dir/depend.internal".
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/abinitformat.cpp: In member function 'virtual bool OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/abinitformat.cpp:91:12: warning: variable 'acell' set but not used [-Wunused-but-set-variable]
double acell[3]; // scale of lattice vectors
^~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CSRformat.dir/depend.internal".
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/aoforceformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/aoforceformat.so CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dacesformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/acesformat.dir/acesformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/acesformat.cpp
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/acesformat.so CMakeFiles/acesformat.dir/acesformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/readconformers.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pdbformat.dir/depend.internal".
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dalchemyformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/alchemyformat.cpp
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[ 38%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dchemkinformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemkinformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemkinformat.cpp: In member function 'bool OpenBabel::ChemKinFormat::ReadReactionQualifierLines(std::istream&, OpenBabel::OBReaction*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemkinformat.cpp:634:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int i=0;i<toks.size()-1;++i)//also incremented in body to retrieve id,val pairs
~^~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemkinformat.cpp: In member function 'bool OpenBabel::ChemKinFormat::WriteReactionLine(OpenBabel::OBReaction*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemkinformat.cpp:905:11: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch]
switch(pRD->ReactionType)
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemkinformat.cpp:905:11: warning: enumeration value 'THREEBODY' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemkinformat.cpp:984:11: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch]
switch(pRD->ReactionType)
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/chemkinformat.cpp:984:11: warning: enumeration value 'SRI' not handled in switch [-Wswitch]
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/painterformat.dir/depend.internal".
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Scanning dependencies of target painterformat
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/chemkinformat.so CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color=
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[ 43%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpubchem_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/pubchem.dir/xml/xml.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xml/xml.cpp
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/pubchem.so CMakeFiles/pubchem.dir/xml/pubchem.cpp.o CMakeFiles/pubchem.dir/xml/xml.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm -lxml2 ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/povrayformat.dir/depend.internal".
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Scanning dependencies of target povrayformat
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[ 43%] Building CXX object src/formats/CMakeFiles/CSRformat.dir/CSRformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DCSRformat_EXPORTS -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/CSRformat.dir/CSRformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CSRformat.cpp
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/shelxformat.dir/depend.internal".
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Scanning dependencies of target shelxformat
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make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 44%] Building CXX object src/formats/CMakeFiles/confabreport.dir/confabreport.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dconfabreport_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/confabreport.dir/confabreport.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/confabreport.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/confabreport.cpp:35:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/confabreport.cpp:35:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/confabreport.cpp:35:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/confabreport.cpp: In member function 'void OpenBabel::ConfabReport::WriteOutput(std::ostream&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/confabreport.cpp:128:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i=1; i < binvals.size(); i++)
~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/confabreport.cpp:133:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i=1; i < cumbins.size(); i++)
~~^~~~~~~~~~~~~~~~
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[ 47%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpainterformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/painterformat.dir/painterformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/painterformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/painterformat.cpp: In member function 'virtual bool OpenBabel::PainterFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/painterformat.cpp:113:12: warning: unused variable 'ofs' [-Wunused-variable]
ostream& ofs = *pConv->GetOutStream();
^~~
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[ 47%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpovrayformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/povrayformat.dir/povrayformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/povrayformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/povrayformat.cpp: In member function 'void OpenBabel::PovrayFormat::OutputHeader(std::ostream&, OpenBabel::OBMol&, std::__cxx11::string)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/povrayformat.cpp:168:12: warning: variable 'time_res' set but not used [-Wunused-but-set-variable]
size_t time_res; /* Result of strftime */
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/povrayformat.cpp: In member function 'virtual bool OpenBabel::PovrayFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/povrayformat.cpp:802:17: warning: unused variable 'title' [-Wunused-variable]
const char* title = pmol->GetTitle();
^~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 47%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxsfformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/xsfformat.dir/xsfformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/xsfformat.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Linking CXX shared module ../../lib64/povrayformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Built target povrayformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/posformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/posformat.dir/depend.internal".
Scanning dependencies of target posformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 46%] Building CXX object src/formats/CMakeFiles/pdbformat.dir/pdbformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpdbformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/pdbformat.dir/pdbformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbformat.cpp:623:52: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=]
snprintf(type_name, sizeof(type_name), " %-3s", tmp);
^~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbformat.cpp:17:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbformat.cpp:641:64: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=]
snprintf(padded_name, sizeof(padded_name), " %-3s", tmp);
^~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbformat.cpp:17:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbformat.cpp:678:34: warning: '%+d' directive output may be truncated writing between 2 and 6 bytes into a region of size 3 [-Wformat-truncation=]
snprintf(scharge, 3, "%+d", charge);
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbformat.cpp:678:34: note: directive argument in the range [-32768, 32767]
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pdbformat.cpp:17:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 3 and 7 bytes into a destination of size 3
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Linking CXX shared module ../../lib64/xsfformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xsfformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/xsfformat.so CMakeFiles/xsfformat.dir/xsfformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Built target xsfformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/lmpdatformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/lmpdatformat.dir/depend.internal".
Scanning dependencies of target lmpdatformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Linking CXX shared module ../../lib64/pdbformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Built target pdbformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fastsearchformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fastsearchformat.dir/depend.internal".
Scanning dependencies of target fastsearchformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 47%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dsmileyformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/smileyformat.dir/smileyformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp: In member function 'void OpenBabel::OpenBabelCallback::setChiral(int, Smiley::Chirality, const std::vector<int>&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'NotChiral' not handled in switch [-Wswitch]
switch (chirality) {
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TH1' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TH2' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'AL1' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'AL2' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'SP1' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'SP2' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'SP3' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB1' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB2' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB3' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB4' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB5' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB6' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB7' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB8' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB9' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB10' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB11' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB12' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB13' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB14' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB15' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB16' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB17' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB18' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB19' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'TB20' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH1' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH2' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH3' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH4' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH5' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH6' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH7' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH8' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH9' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH10' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH11' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH12' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH13' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH14' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH15' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH16' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH17' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH18' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH19' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH20' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH21' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH22' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH23' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH24' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH25' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH26' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH27' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH28' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH29' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:153:14: warning: enumeration value 'OH30' not handled in switch [-Wswitch]
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:20:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h: In instantiation of 'void Smiley::Parser<Callback>::processStereochemistry() [with Callback = OpenBabel::OpenBabelCallback]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h:2707:9: required from 'void Smiley::Parser<Callback>::parse(const string&) [with Callback = OpenBabel::OpenBabelCallback; std::__cxx11::string = std::__cxx11::basic_string<char>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:365:26: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h:2642:43: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (m_chiralInfo[i].nbrs.size() != expectedValence && m_exceptions & InvalidChiralValence)
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h: In instantiation of 'Smiley::Parser<Callback>::RingBondInfo::RingBondInfo(int, int, bool, bool, bool, std::size_t) [with Callback = OpenBabel::OpenBabelCallback; std::size_t = long unsigned int]':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h:2409:41: required from 'void Smiley::Parser<Callback>::processRingBond(int, std::size_t) [with Callback = OpenBabel::OpenBabelCallback; std::size_t = long unsigned int]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h:2429:11: required from 'void Smiley::Parser<Callback>::parseRingBond() [with Callback = OpenBabel::OpenBabelCallback]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h:2507:13: required from 'void Smiley::Parser<Callback>::parseChain() [with Callback = OpenBabel::OpenBabelCallback]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h:2698:9: required from 'void Smiley::Parser<Callback>::parse(const string&) [with Callback = OpenBabel::OpenBabelCallback; std::__cxx11::string = std::__cxx11::basic_string<char>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smileyformat.cpp:365:26: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h:986:14: warning: 'Smiley::Parser<OpenBabel::OpenBabelCallback>::RingBondInfo::isExplicit' will be initialized after [-Wreorder]
bool isExplicit;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h:981:21: warning: 'std::size_t Smiley::Parser<OpenBabel::OpenBabelCallback>::RingBondInfo::pos' [-Wreorder]
std::size_t pos;
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smiley.h:974:9: warning: when initialized here [-Wreorder]
RingBondInfo(int number_, int order_, bool isUp_, bool isDown_,
^~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 49%] Linking CXX shared module ../../lib64/smileyformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smileyformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 49%] Built target smileyformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/thermoformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/thermoformat.dir/depend.internal".
Scanning dependencies of target thermoformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Building CXX object src/formats/CMakeFiles/posformat.dir/posformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dposformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/posformat.dir/posformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/posformat.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 50%] Linking CXX shared module ../../lib64/posformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/posformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/posformat.so CMakeFiles/posformat.dir/posformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 50%] Built target posformat
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make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gulpformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gulpformat.dir/depend.internal".
Scanning dependencies of target gulpformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 47%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dinchiformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchiformat.dir/inchiformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/inchiformat.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/inchiformat.cpp:28:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h: In member function 'bool OpenBabel::InChIFormat::InchiLess::operator()(const string&, const string&) const':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:150:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while(p1!=s1.end() && isdigit(*p1++)); --p1;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:150:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while(p1!=s1.end() && isdigit(*p1++)); --p1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:155:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while(p2!=s2.end() && isdigit(*p2++)); --p2;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:155:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while(p2!=s2.end() && isdigit(*p2++)); --p2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/inchiformat.cpp: In member function 'virtual bool OpenBabel::InChIFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/inchiformat.cpp:177:52: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'AT_NUM' {aka 'short int'} [-Wsign-compare]
if ( !(a->GetId() == ct->end || a->GetId() == stereo.neighbor[0] ) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/inchiformat.cpp:183:54: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'AT_NUM' {aka 'short int'} [-Wsign-compare]
if ( !(b->GetId() == ct->begin || b->GetId() == stereo.neighbor[3] ) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opisomorph.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opisomorph.cpp: In member function 'virtual bool OpenBabel::OpNewS::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opisomorph.cpp:300:28: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if(pmol->NumHvyAtoms() != nPatternAtoms)
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 51%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dinchiformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchiformat.dir/getinchi.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/getinchi.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 49%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dthermoformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/thermoformat.dir/thermoformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/thermoformat.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 52%] Linking CXX shared module ../../lib64/thermoformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/thermoformat.so CMakeFiles/thermoformat.dir/thermoformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 52%] Built target thermoformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mmodformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mmodformat.dir/depend.internal".
Scanning dependencies of target mmodformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Building CXX object src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfastsearchformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fastsearchformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fastsearchformat.cpp: In member function 'void OpenBabel::FastSearchFormat::AddPattern(std::vector<OpenBabel::OBMol>&, OpenBabel::OBMol, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fastsearchformat.cpp:668:11: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if(idx>=patternMol.NumBonds())
~~~^~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 53%] Linking CXX shared module ../../lib64/fastsearchformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 53%] Built target fastsearchformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mol2format.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/mol2format.dir/depend.internal".
Scanning dependencies of target mol2format
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dlmpdatformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp: In member function 'virtual bool OpenBabel::LMPDATFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:271:13: warning: unused variable 'length' [-Wunused-variable]
double length=cmax-cmin;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:361:11: warning: unused variable 'atomid' [-Wunused-variable]
int atomid=5;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:362:14: warning: unused variable 'charge' [-Wunused-variable]
double charge=0.5;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:528:10: warning: '%11s' directive output may be truncated writing between 11 and 32767 bytes into a region of size between 32695 and 32736 [-Wformat-truncation=]
"%-4d %4d %4d %4d %4d %4d # %11s\n",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:535:10:
DihedralString);
~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:15:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 45 and 32842 bytes into a destination of size 32768
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:510:10: warning: '%11s' directive output may be truncated writing between 11 and 32767 bytes into a region of size between 32695 and 32736 [-Wformat-truncation=]
"%-4d %4d %4d %4d %4d %4d # %11s\n",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:517:10:
DihedralString);
~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:15:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 45 and 32842 bytes into a destination of size 32768
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:468:9: warning: '%8s' directive output may be truncated writing between 8 and 32767 bytes into a region of size between 32707 and 32741 [-Wformat-truncation=]
"%-4d %4d %4d %4d %4d # %8s\n",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:474:9:
AngleString);
~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:15:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 37 and 32830 bytes into a destination of size 32768
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:452:9: warning: '%8s' directive output may be truncated writing between 8 and 32767 bytes into a region of size between 32707 and 32741 [-Wformat-truncation=]
"%-4d %4d %4d %4d %4d # %8s\n",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:458:9:
AngleString);
~~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:15:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 37 and 32830 bytes into a destination of size 32768
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:415:9: warning: '%5s' directive output may be truncated writing between 5 and 32767 bytes into a region of size between 32719 and 32746 [-Wformat-truncation=]
"%-4d %4d %4d %4d # %5s\n",
^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:420:9:
BondString);
~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:15:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 29 and 32818 bytes into a destination of size 32768
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:401:9: warning: '%5s' directive output may be truncated writing between 5 and 32767 bytes into a region of size between 32719 and 32746 [-Wformat-truncation=]
"%-4d %4d %4d %4d # %5s\n",
^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:406:9:
BondString);
~~~~~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/lmpdatformat.cpp:15:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 29 and 32818 bytes into a destination of size 32768
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 54%] Linking CXX shared module ../../lib64/lmpdatformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 54%] Built target lmpdatformat
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/MNAformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/MNAformat.dir/depend.internal".
Scanning dependencies of target MNAformat
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[ 51%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgulpformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/gulpformat.dir/gulpformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gulpformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gulpformat.cpp: In member function 'virtual bool OpenBabel::GULPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gulpformat.cpp:352:14: warning: 'pv_eV' may be used uninitialized in this function [-Wmaybe-uninitialized]
double pv_kcal_per_mole = pv_eV * EV_TO_KCAL_PER_MOL;
^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gulpformat.cpp:351:14: warning: 'enthalpy_eV' may be used uninitialized in this function [-Wmaybe-uninitialized]
double en_kcal_per_mole = enthalpy_eV * EV_TO_KCAL_PER_MOL;
^~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 51%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/ophighlight.cpp
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/png2format.dir/depend.internal".
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[ 43%] Building CXX object src/formats/CMakeFiles/smilesformat.dir/smilesformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dsmilesformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/smilesformat.dir/smilesformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBSmilesParser::ParseSmiles(OpenBabel::OBMol&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:587:15: warning: variable 'atom' set but not used [-Wunused-but-set-variable]
OBAtom* atom;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp: In member function 'std::vector<OpenBabel::OBBondClosureInfo> OpenBabel::OBMol2Cansmi::GetCanonClosureDigits(OpenBabel::OBAtom*, OpenBabel::OBBitVec&, std::vector<unsigned int>&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:3482:11: warning: unused variable 'bo' [-Wunused-variable]
int bo = (bond1->IsAromatic())? 1 : bond1->GetBO(); // CJ: why was this line added? bo is never used?
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp: In member function 'void OpenBabel::OBMol2Cansmi::CreateFragCansmiString(OpenBabel::OBMol&, OpenBabel::OBBitVec&, bool, char*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:4066:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i=0; i<atom_order.size(); ++i)
~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:4072:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<unsigned int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for (int i=0; i<canonical_order.size(); ++i)
~^~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:4175:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (*can_iter <= mol.NumAtoms())
~~~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector<OpenBabel::OBAtom*>&, std::vector<unsigned int>&, char*, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:2989:19: warning: '%d' directive writing between 1 and 5 bytes into a region of size 4 [-Wformat-overflow=]
sprintf(iso,"%d",atom->GetIsotope());
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:2989:19: note: directive argument in the range [1, 65535]
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:22:
/usr/include/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 2 and 6 bytes into a destination of size 4
return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:3037:26: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=]
sprintf(tcount,"%d", hcount);
^~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/smilesformat.cpp:22:
/usr/include/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 2 and 11 bytes into a destination of size 10
return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smilesformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color=
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dinchiformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/unique.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/unique.cpp:23:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h: In member function 'bool OpenBabel::InChIFormat::InchiLess::operator()(const string&, const string&) const':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:150:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while(p1!=s1.end() && isdigit(*p1++)); --p1;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:150:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while(p1!=s1.end() && isdigit(*p1++)); --p1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:155:13: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
while(p2!=s2.end() && isdigit(*p2++)); --p2;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/inchiformat.h:155:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
while(p2!=s2.end() && isdigit(*p2++)); --p2;
^~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmol2format_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/mol2format.dir/mol2format.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp: In member function 'virtual const char* OpenBabel::MOL2Format::Description()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:49:94: warning: statement has no effect [-Wunused-value]
" c Write UCSF Dock scores saved in comments preceeding molecules\n\n";
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp: In member function 'virtual bool OpenBabel::MOL2Format::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:391:46: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if ((bond2->GetBeginAtom()->GetIdx() == idx1 || bond2->GetEndAtom()->GetIdx() == idx1)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:391:87: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if ((bond2->GetBeginAtom()->GetIdx() == idx1 || bond2->GetEndAtom()->GetIdx() == idx1)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:394:51: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
else if ((bond2->GetBeginAtom()->GetIdx() == idx2 || bond2->GetEndAtom()->GetIdx() == idx2)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:394:92: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
else if ((bond2->GetBeginAtom()->GetIdx() == idx2 || bond2->GetEndAtom()->GetIdx() == idx2)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:476:99: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (n_h_bonded < min_n_h_bonded || (n_h_bonded == min_n_h_bonded && partner->GetIdx() < min_idx)) {
~~~~~~~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:499:35: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (partner->GetIdx() == min_idx) {
~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp: In member function 'virtual int OpenBabel::MOL2Format::SkipObjects(int, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:727:10: warning: unused variable 'ch' [-Wunused-variable]
char ch = ifs.peek();
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp: In member function 'virtual bool OpenBabel::MOL2Format::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:677:35: warning: '%-6s' directive output may be truncated writing between 6 and 32767 bytes into a region of size between 32756 and 32760 [-Wformat-truncation=]
snprintf(buffer,BUFF_SIZE,"%7d %-6s %9.4f %9.4f %9.4f %-5s %3s %-8s %9.4f",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
atom->GetIdx(),label,
~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:17:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output 77 or more bytes (assuming 98361) into a destination of size 32768
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:702:36: warning: '%2s' directive output may be truncated writing between 2 and 32767 bytes into a region of size between 32730 and 32747 [-Wformat-truncation=]
snprintf(buffer, BUFF_SIZE,"%6d %5d %5d %2s",
^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:704:18:
label);
~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mol2format.cpp:17:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 24 and 32806 bytes into a destination of size 32768
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 55%] Linking CXX shared module ../../lib64/mol2format.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/mol2format.so CMakeFiles/mol2format.dir/mol2format.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[1]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 55%] Built target mol2format
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fpsformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fpsformat.dir/depend.internal".
Scanning dependencies of target fpsformat
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[ 54%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dbalstformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/balstformat.dir/balstformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/balstformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/balstformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/balstformat.so CMakeFiles/balstformat.dir/balstformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/nulformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/nulformat.dir/depend.internal".
Scanning dependencies of target nulformat
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[ 54%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpng2format_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/png2format.dir/png2format.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/png2format.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/png2format.cpp: In member function 'virtual bool OpenBabel::PNG2Format::WriteChemObject(OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/png2format.cpp:102:42: warning: comparison of integer expressions of different signedness: 'std::vector<OpenBabel::OBBase*>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
bool nomore = _nmax && (_objects.size()==_nmax);
~~~~~~~~~~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/png2format.cpp:132:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBBase*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
pConv->SetLast(n==_objects.size());
~^~~~~~~~~~~~~~~~~
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[ 54%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Ddmolformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/dmolformat.dir/dmolformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/dmolformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gamessformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/gamessformat.dir/depend.internal".
Scanning dependencies of target gamessformat
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 48%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmdlformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/mdlformat.dir/mdlformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp:38:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h: In function 'unsigned int MDLValence(unsigned int, int, unsigned int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:51:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:51:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:64:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:64:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:77:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:77:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:90:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:90:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:103:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:103:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:116:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:116:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:119:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:119:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:121:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:121:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:134:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:134:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:137:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:137:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:139:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:139:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:152:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:152:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:155:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:155:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:157:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:157:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:170:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:170:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:173:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:173:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:175:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:175:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:188:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:188:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:191:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:191:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:193:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:193:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:206:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:206:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:209:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:209:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:211:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:211:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:223:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:223:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:226:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:226:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:228:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:228:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:240:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:240:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:243:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:243:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:245:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:245:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:257:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:257:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:260:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:260:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:262:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:262:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:274:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:274:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:277:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:277:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:279:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:279:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:291:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:291:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:294:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:294:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:296:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:296:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:298:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 4) return 4; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:298:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 4) return 4; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:310:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:310:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:313:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:313:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:315:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:315:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:317:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 4) return 4; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:317:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 4) return 4; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:329:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:329:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:332:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:332:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:334:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:334:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:336:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 4) return 4; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:336:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 4) return 4; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:348:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:348:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:351:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:351:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:353:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:353:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:355:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 4) return 4; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:355:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 4) return 4; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:367:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:367:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:370:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:370:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:372:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:372:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:374:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 4) return 4; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:374:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 4) return 4; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:385:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 7) return 7; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:385:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 7) return 7; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:388:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 6) return 6; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:388:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 6) return 6; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:390:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 5) return 5; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:390:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 5) return 5; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:392:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 4) return 4; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:392:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 4) return 4; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:394:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (val <= 3) return 3; break;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:394:40: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (val <= 3) return 3; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h: In function 'unsigned int HYDValence(unsigned int, int, unsigned int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlvalence.h:416:11: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (val > impval) {
~~~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp: In member function 'bool OpenBabel::MDLFormat::ReadAtomBlock(std::istream&, OpenBabel::OBMol&, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp:1345:10: warning: unused variable 'chiralWatch' [-Wunused-variable]
bool chiralWatch=false;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp: In member function 'std::__cxx11::string OpenBabel::MDLFormat::GetTimeDate()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp:1652:22: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=]
snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday,
^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp:1652:22: note: directive argument in the range [-2147483648, 2147483547]
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/include/c++/8/bits/locale_classes.h:40,
from /usr/include/c++/8/bits/ios_base.h:41,
from /usr/include/c++/8/iomanip:40,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp:27:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 11 and 56 bytes into a destination of size 11
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp: In member function 'void OpenBabel::MDLFormat::CisTransFromUpDown(OpenBabel::OBMol*, std::map<OpenBabel::OBBond*, OpenBabel::OBStereo::BondDirection>*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp:1971:58: warning: 'a2_stereo' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (a1_stereo == OBStereo::UnknownDir || a2_stereo == OBStereo::UnknownDir)
~~~~~~~~~~^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mdlformat.cpp:1965:7: warning: 'a1_stereo' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (a1_stereo == a2_stereo)
^~
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/castepformat.cpp: In member function 'virtual bool OpenBabel::CASTEPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
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energy = enthalpy - pv;
~~~~~~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/castepformat.cpp:187:21: warning: 'volume' may be used uninitialized in this function [-Wmaybe-uninitialized]
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~~~~~~~^~~~~~~~~~
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size_t time_res; /* Result of strftime */
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/unichemformat.so CMakeFiles/unichemformat.dir/unichemformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/nwchemformat.dir/depend.internal".
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/titleformat.so CMakeFiles/titleformat.dir/titleformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dstlformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/stlformat.dir/stlformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/stlformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/stlformat.cpp: In function 'void OpenBabel::map_sphere(std::vector<OpenBabel::Triangle>&, OpenBabel::vector3, double, uint16_t)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/stlformat.cpp:149:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::vector3>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for( int i=0 ; i < points.size()-2; i++ ) {
~~^~~~~~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/qchemformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/qchemformat.dir/depend.internal".
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/stlformat.so CMakeFiles/stlformat.dir/stlformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/svgformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/svgformat.dir/depend.internal".
Scanning dependencies of target svgformat
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make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build
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[ 58%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opalign.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opalign.cpp:22:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opalign.cpp:22:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opalign.cpp:22:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgamessukformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessukformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessukformat.cpp: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadInitialCartesian(OpenBabel::OBMol&, std::istream&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessukformat.cpp:779:10: warning: variable 'ok' set but not used [-Wunused-but-set-variable]
bool ok=false;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessukformat.cpp: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadOptGeomXyz1(OpenBabel::OBMol&, std::istream&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessukformat.cpp:845:12: warning: variable 'ok' set but not used [-Wunused-but-set-variable]
bool ok=false;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessukformat.cpp: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadOptGeomXyz2(OpenBabel::OBMol&, std::istream&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessukformat.cpp:892:12: warning: variable 'ok' set but not used [-Wunused-but-set-variable]
bool ok=false;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessukformat.cpp: In member function 'virtual bool OpenBabel::GAMESSUKOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessukformat.cpp:1207:12: warning: variable 'ok' set but not used [-Wunused-but-set-variable]
bool ok;
^~
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/ops/opconfab.cpp:160:14: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (; c < mol.NumConformers(); ++c) {
~~^~~~~~~~~~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dsvgformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/svgformat.dir/svgformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/svgformat.cpp
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/svgformat.cpp:222:42: warning: comparison of integer expressions of different signedness: 'std::vector<OpenBabel::OBBase*>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
bool nomore = _nmax && (_objects.size()==_nmax);
~~~~~~~~~~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/svgformat.cpp:244:18: warning: unused variable 'n' [-Wunused-variable]
unsigned int n=0;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/svgformat.cpp: In member function 'virtual bool OpenBabel::SVGFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/svgformat.cpp:269:8: warning: unused variable 'ret' [-Wunused-variable]
bool ret = WriteSVG(pConv,_objects);
^~~
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else if (atom_count > resBondFromOffset)
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmopacformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/mopacformat.dir/mopacformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mopacformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mopacformat.cpp: In member function 'virtual bool OpenBabel::MOPACCARTFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mopacformat.cpp:642:19: warning: variable 'isotopeMass' set but not used [-Wunused-but-set-variable]
double x,y,z, isotopeMass;
^~~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/atom.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:42,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mopacformat.cpp:17:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/vector3.h: In member function 'virtual bool OpenBabel::MOPACFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/vector3.h:91:11: warning: 'y' may be used uninitialized in this function [-Wmaybe-uninitialized]
_vy = inY;
~~~~^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mopacformat.cpp:73:14: note: 'y' was declared here
double x,y,z;
^
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/atom.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:42,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mopacformat.cpp:17:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/vector3.h:90:11: warning: 'x' may be used uninitialized in this function [-Wmaybe-uninitialized]
_vx = inX;
~~~~^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/mopacformat.cpp:73:12: note: 'x' was declared here
double x,y,z;
^
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/vaspformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/vaspformat.dir/depend.internal".
Scanning dependencies of target vaspformat
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/pwscfformat.dir/depend.internal".
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[ 56%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgamessformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/gamessformat.dir/gamessformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessformat.cpp: In member function 'virtual bool OpenBabel::GAMESSOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessformat.cpp:227:9: warning: variable 'ndummyatoms' set but not used [-Wunused-but-set-variable]
int ndummyatoms = 0;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessformat.cpp:520:58: warning: 'lowFreqModesEnd' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (numIntens < lowFreqModesBegin || numIntens > lowFreqModesEnd)
~~~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gamessformat.cpp:520:25: warning: 'lowFreqModesBegin' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (numIntens < lowFreqModesBegin || numIntens > lowFreqModesEnd)
~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/acrformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/acrformat.dir/depend.internal".
Scanning dependencies of target acrformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfingerprintformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fingerprintformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/fingerprintformat.so CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/zindoformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/zindoformat.dir/depend.internal".
Scanning dependencies of target zindoformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dnwchemformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadCoordinates(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:221:72: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if ((i>=natoms) || (molecule->GetAtom(i+1)->GetAtomicNum() != atoi(vs[2].c_str())))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadMultipoleMoment(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:296:17: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
else if (vs[0][0] == '1')
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadPartialCharges(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:413:56: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (molecule->GetAtom(i++)->GetAtomicNum() != charge)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadMEPCalculation(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:561:25: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (energies.size() != molecule->NumConformers())
~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadNEBCalculation(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:826:79: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (etab.GetAtomicNum(vs[1].substr(0, end_of_symbol).c_str()) != molecule->GetAtom(i+1)->GetAtomicNum())
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadZTSCalculation(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:914:34: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (atoi(buffer) != natoms)
~~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:924:84: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if ((vs.size() < 4) || (molecule->GetAtom(i+1)->GetAtomicNum() != etab.GetAtomicNum(vs[0].c_str())))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: At global scope:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:104:20: warning: 'OpenBabel::BETA_ORBITAL_PATTERN' defined but not used [-Wunused-variable]
static const char* BETA_ORBITAL_PATTERN = "Beta";
^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadCoordinates(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:195:13: warning: 'coordinates' may be used uninitialized in this function [-Wmaybe-uninitialized]
double* coordinates;
^~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadZTSCalculation(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:939:21: warning: 'nbeads' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (bead_number != nbeads)
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadMultipoleMoment(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:278:41: warning: 'charge' may be used uninitialized in this function [-Wmaybe-uninitialized]
molecule->SetTotalCharge(charge);
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp: In member function 'void OpenBabel::NWChemOutputFormat::ReadSinglePointCalculation(std::istream*, OpenBabel::OBMol*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/nwchemformat.cpp:758:5: warning: 'energy' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (energy == 0)
^~
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make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/moldenformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/moldenformat.dir/depend.internal".
Scanning dependencies of target moldenformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dreportformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/reportformat.dir/reportformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/reportformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/reportformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/reportformat.so CMakeFiles/reportformat.dir/reportformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/orcaformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/orcaformat.dir/depend.internal".
Scanning dependencies of target orcaformat
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[ 62%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpngformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/pngformat.dir/pngformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pngformat.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pngformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/pngformat.so CMakeFiles/pngformat.dir/pngformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/PQSformat.dir/depend.internal".
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Scanning dependencies of target PQSformat
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[ 62%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpwscfformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pwscfformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pwscfformat.cpp: In member function 'virtual bool OpenBabel::PWscfFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pwscfformat.cpp:273:14: warning: 'pv' may be used uninitialized in this function [-Wmaybe-uninitialized]
double pv_eV = pv / EV_TO_KCAL_PER_MOL;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pwscfformat.cpp:272:14: warning: 'enthalpy' may be used uninitialized in this function [-Wmaybe-uninitialized]
double en_eV = enthalpy / EV_TO_KCAL_PER_MOL;
^~~~~
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[ 61%] Building CXX object src/formats/CMakeFiles/siestaformat.dir/siestaformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dsiestaformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/siestaformat.dir/siestaformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/siestaformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/siestaformat.cpp: In member function 'virtual bool OpenBabel::SIESTAFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/siestaformat.cpp:82:10: warning: variable 'coordsAreAngstrom' set but not used [-Wunused-but-set-variable]
bool coordsAreAngstrom = false;
^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/siestaformat.cpp:88:12: warning: variable 'size' set but not used [-Wunused-but-set-variable]
size_t size;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/siestaformat.cpp:92:30: warning: unused variable 'numSpecies' [-Wunused-variable]
int atomicNum, numAtoms, numSpecies;
^~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dacrformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/acrformat.dir/acrformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/acrformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/acrformat.cpp: In member function 'virtual bool OpenBabel::ACRFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/acrformat.cpp:137:39: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
X = atof((char*)vs[6].c_str())/scale;
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/acrformat.cpp:159:5: warning: 'bonds' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( pmol->NumBonds() != bonds ) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/acrformat.cpp:163:12: warning: 'atoms' may be used uninitialized in this function [-Wmaybe-uninitialized]
} else if ( pmol->NumAtoms() != atoms ) {
^~
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/pwscfformat.so CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/MCDLformat.dir/depend.internal".
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/siestaformat.so CMakeFiles/siestaformat.dir/siestaformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/copyformat.dir/depend.internal".
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Scanning dependencies of target copyformat
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/acrformat.so CMakeFiles/acrformat.dir/acrformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/freefracformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/freefracformat.dir/depend.internal".
Scanning dependencies of target freefracformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dzindoformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/zindoformat.dir/zindoformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/zindoformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/zindoformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/zindoformat.so CMakeFiles/zindoformat.dir/zindoformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Scanning dependencies of target amberformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcopyformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/copyformat.dir/copyformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/copyformat.cpp
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/copyformat.so CMakeFiles/copyformat.dir/copyformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/PQSformat.cpp: In member function 'virtual bool OpenBabel::PQSFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/PQSformat.cpp:259:49: warning: 'pFormat' may be used uninitialized in this function [-Wmaybe-uninitialized]
return pFormat->ReadMolecule(&mol,&coordconv);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcccformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/cccformat.dir/cccformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/cccformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/cccformat.so CMakeFiles/cccformat.dir/cccformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/cacaoformat.dir/depend.internal".
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Scanning dependencies of target cacaoformat
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make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 62%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dvaspformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/vaspformat.dir/vaspformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp: In member function 'virtual bool OpenBabel::VASPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp:438:17: warning: unused variable 'freqnum' [-Wunused-variable]
int freqnum = atoi(vs[0].c_str());
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp: In member function 'virtual bool OpenBabel::VASPFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp:657:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<OpenBabel::OBAtom*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int i = 0; i < atoms_sorted.size(); i++)
~~^~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp:668:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if(atomicNums.size() > 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp:669:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
atomicNums.rbegin()->second++;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp: In member function 'virtual bool OpenBabel::VASPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp:397:21: warning: 'fermi' may be used uninitialized in this function [-Wmaybe-uninitialized]
dos->SetData(fermi, energies, densities, integration);
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp: In member function 'virtual bool OpenBabel::VASPFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/vaspformat.cpp:752:26: warning: 'atom' may be used uninitialized in this function [-Wmaybe-uninitialized]
if (atom->HasData("move")) {
~~~~~~~~~~~~~^~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/vaspformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fchkformat.dir/depend.internal".
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Scanning dependencies of target fchkformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dbgfformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/bgfformat.dir/bgfformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/bgfformat.cpp
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[ 63%] Building CXX object src/formats/CMakeFiles/orcaformat.dir/orcaformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dorcaformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/orcaformat.dir/orcaformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp: In member function 'virtual bool OpenBabel::OrcaOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp:338:33: warning: comparison of integer expressions of different signedness: 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
while(vs.size() == nColumn+1) {
~~~~~~~~~~^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp:353:48: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (unsigned int i = 0; i < nColumn; i++) {
~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp:365:44: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
for (unsigned int i = 0; i < nColumn; i++) {
~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp:121:12: warning: unused variable 'energy' [-Wunused-variable]
double energy=0;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp:128:9: warning: variable 'nModeAll' set but not used [-Wunused-but-set-variable]
int nModeAll = 0;
^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp: In member function 'virtual bool OpenBabel::OrcaInputFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp:646:10: warning: unused variable 'buffer' [-Wunused-variable]
char buffer[BUFF_SIZE];
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp: In member function 'virtual bool OpenBabel::OrcaOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp:210:36: warning: 'atom' may be used uninitialized in this function [-Wmaybe-uninitialized]
atom->SetVector(x,y,z); //set atom coordinates
~~~~~~~~~~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/orcaformat.cpp:207:37: warning: 'confCoords' may be used uninitialized in this function [-Wmaybe-uninitialized]
confCoords[i*3+2] = z;
^
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Scanning dependencies of target carformat
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/orcaformat.so CMakeFiles/orcaformat.dir/orcaformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Scanning dependencies of target pqrformat
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/boxformat.so CMakeFiles/boxformat.dir/boxformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/chem3dformat.dir/depend.internal".
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcacaoformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/cacaoformat.cpp
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/carformat.so CMakeFiles/carformat.dir/carformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/molproformat.dir/depend.internal".
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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[ 71%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dtinkerformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/tinkerformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/tinkerformat.cpp: In member function 'virtual bool OpenBabel::TinkerFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/tinkerformat.cpp:101:9: warning: unused variable 'atomicNum' [-Wunused-variable]
int atomicNum;
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/tinkerformat.cpp: In function 'int OpenBabel::SetMM3Type(OpenBabel::OBAtom*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/tinkerformat.cpp:377:11: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (b->GetHyb() == 2) // S=C
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/tinkerformat.cpp:378:31: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
countNeighborC++; break;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/tinkerformat.cpp:220:17: warning: unused variable 'c' [-Wunused-variable]
OBAtom *b, *c; // neighbors
^
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 69%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfchkformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/fchkformat.dir/fchkformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fchkformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fchkformat.cpp: In member function 'virtual bool OpenBabel::FCHKFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fchkformat.cpp:587:40: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (alphaorb_found && (numAOrb > alphaorb.size()))
~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fchkformat.cpp:600:40: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (betaorb_found && (numBOrb > betaorb.size()))
~~~~~~~~^~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fchkformat.cpp:691:40: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (numAOrb > 0 && alphaorb.size() == numAOrb) {
~~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/fchkformat.cpp:695:41: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (numBOrb > 0 && betaorb.size() == numBOrb) { // open shell calculation
~~~~~~~~~~~~~~~^~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 74%] Linking CXX shared module ../../lib64/tinkerformat.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 74%] Built target tinkerformat
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make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color=
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/cifformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/cifformat.dir/depend.internal".
Scanning dependencies of target cifformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/fchkformat.so CMakeFiles/fchkformat.dir/fchkformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 70%] Building CXX object src/formats/CMakeFiles/pqrformat.dir/pqrformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpqrformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/pqrformat.dir/pqrformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp: In function 'double OpenBabel::parseAtomCharge(char*, OpenBabel::OBMol&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp:196:13: warning: unused variable 'atom' [-Wunused-variable]
OBAtom *atom = mol.GetAtom(mol.NumAtoms());
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp: In function 'double OpenBabel::parseAtomRadius(char*, OpenBabel::OBMol&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp:211:13: warning: unused variable 'atom' [-Wunused-variable]
OBAtom *atom = mol.GetAtom(mol.NumAtoms());
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp: In member function 'virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp:501:52: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=]
snprintf(type_name, sizeof(type_name), " %-3s", tmp);
^~~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp:16:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 10
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp:518:64: warning: '%-3s' directive output may be truncated writing between 3 and 15 bytes into a region of size 9 [-Wformat-truncation=]
snprintf(padded_name, sizeof(padded_name), " %-3s", tmp);
^~~~~~~ ~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/pqrformat.cpp:16:
/usr/include/bits/stdio2.h:64:35: note: '__builtin___snprintf_chk' output between 5 and 17 bytes into a destination of size 10
return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 74%] Built target fchkformat
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/featformat.dir/depend.internal".
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Scanning dependencies of target featformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/crkformat.dir/depend.internal".
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[ 71%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dhinformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/hinformat.dir/hinformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/hinformat.cpp
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/hinformat.so CMakeFiles/hinformat.dir/hinformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Scanning dependencies of target cssrformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMCDLformat_EXPORTS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp: In member function 'void OpenBabel::MCDLFormat::solve(int, int (*)[4], int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:278:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (jflag)
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:282:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
nt = 1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp: In member function 'std::__cxx11::string OpenBabel::MCDLFormat::getMCDL(OpenBabel::OBMol*, bool)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:529:10: warning: variable 'test' set but not used [-Wunused-but-set-variable]
bool test;//, testParity;
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp: In member function 'void OpenBabel::MCDLFormat::setMCDL(std::__cxx11::string, OpenBabel::OBMol*, std::__cxx11::string&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:1266:15: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (nPrev == acount) {
~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp: In member function 'int OpenBabel::MCDLFormat::indexOf(std::__cxx11::string, std::__cxx11::string, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:1384:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (result == string::npos) result=-1;
~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:1385:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (result >= instring.length()) result=-1;
~~~~~~~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp: In member function 'int OpenBabel::MCDLFormat::lastIndexOf(std::__cxx11::string, std::__cxx11::string)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:1398:11: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
if (n == string::npos)
~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp: In member function 'std::__cxx11::string OpenBabel::MCDLFormat::constring(int (*)[4], char*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:209:30: warning: '%s' directive writing up to 99 bytes into a region of size 82 [-Wformat-overflow=]
sprintf(line,"%s%d",semis,icons[j]);
^~~~~~ ~~~~~
In file included from /usr/include/stdio.h:862,
from /usr/include/c++/8/cstdio:42,
from /usr/include/c++/8/ext/string_conversions.h:43,
from /usr/include/c++/8/bits/basic_string.h:6400,
from /usr/include/c++/8/string:52,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:35,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:21:
/usr/include/bits/stdio2.h:33:34: note: '__builtin___sprintf_chk' output between 2 and 111 bytes into a destination of size 82
return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp: In member function 'void OpenBabel::MCDLFormat::solve(int, int (*)[4], int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:394:35: warning: 'jump' may be used uninitialized in this function [-Wmaybe-uninitialized]
ix[i] = mx[i] + jump + 1;
~~~~~~^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:395:22: warning: 'dupfrag' may be used uninitialized in this function [-Wmaybe-uninitialized]
else if (ix[i] == dupfrag && j != dupnum)
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/MCDLformat.cpp:385:24: warning: 'numdups' may be used uninitialized in this function [-Wmaybe-uninitialized]
for (j=0; j<numdups; j++)
~^~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MCDLformat.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/MCDLformat.so CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/dlpolyformat.dir/depend.internal".
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmolproformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/molproformat.dir/molproformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/molproformat.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dtextformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/textformat.dir/textformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/textformat.cpp
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/featformat.so CMakeFiles/featformat.dir/featformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/molproformat.so CMakeFiles/molproformat.dir/molproformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/exyzformat.dir/depend.internal".
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Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fhformat.dir/depend.internal".
Dependee "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/CMakeFiles/fhformat.dir/depend.internal".
Scanning dependencies of target fhformat
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcrkformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/crkformat.dir/crkformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp: In static member function 'static bool OpenBabel::CRK2DFormat::ReadCRK(std::istream&, OpenBabel::OBMol&, const char*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:304:38: warning: 'bondStyle' may be used uninitialized in this function [-Wmaybe-uninitialized]
stbondStyle[numBonds]=bondStyle;
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:302:35: warning: 'bondTo' may be used uninitialized in this function [-Wmaybe-uninitialized]
stbondTo[numBonds]=bondTo;
~~~~~~~~~~~~~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:301:37: warning: 'bondFrom' may be used uninitialized in this function [-Wmaybe-uninitialized]
stbondFrom[numBonds]=bondFrom;
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:287:36: warning: 'atomCharge' may be used uninitialized in this function [-Wmaybe-uninitialized]
atm.SetFormalCharge((int)atomCharge);
~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:286:30: warning: 'atomZ' may be used uninitialized in this function [-Wmaybe-uninitialized]
atm.SetVector(atomX,atomY,atomZ);
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:286:30: warning: 'atomY' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:286:30: warning: 'atomX' may be used uninitialized in this function [-Wmaybe-uninitialized]
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:42,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/obmolecformat.h:37,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:16:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/atom.h:144:52: warning: 'atomNumber' may be used uninitialized in this function [-Wmaybe-uninitialized]
void SetAtomicNum(int atomicnum) { _ele = (char)atomicnum; }
^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:241:16: note: 'atomNumber' was declared here
int atomID,atomNumber;
^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/crkformat.cpp:283:37: warning: 'atomID' may be used uninitialized in this function [-Wmaybe-uninitialized]
statomID[numAtoms++]=atomID;
~~~~~~~~~~~~~~~~~~~~^~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 68%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgaussformat_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/cairo -I/usr/src/RPM/BUILD/openbabel-2.4.1/include/inchi -I/usr/include/libxml2 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/gaussformat.dir/gaussformat.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp: In function 'void OpenBabel::add_unique_pairdata_to_mol(OpenBabel::OBMol*, std::__cxx11::string, std::__cxx11::string, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:275:19: warning: comparison of integer expressions of different signedness: 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if (vs.size() >= start)
~~~~~~~~~~^~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:278:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(i=start+1; (i<vs.size()); i++)
~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp: In function 'int OpenBabel::extract_thermo(OpenBabel::OBMol*, std::__cxx11::string, double, double, double, double, double, double, int, std::vector<double>)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:332:17: warning: unused variable 'pg' [-Wunused-variable]
const char *pg = obPG.IdentifyPointGroup();
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp: In member function 'virtual bool OpenBabel::GaussianOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:319:14: warning: 'E0' may be used uninitialized in this function [-Wmaybe-uninitialized]
dhofM0 = E0*eFactor;
~~~~~~~~~^~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:450:29: note: 'E0' was declared here
double ezpe,Hcorr,Gcorr,E0,CV;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:325:36: warning: 'Gcorr' may be used uninitialized in this function [-Wmaybe-uninitialized]
S0MT += 1000*eFactor*(Hcorr-Gcorr)/temperature;
~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:450:23: note: 'Gcorr' was declared here
double ezpe,Hcorr,Gcorr,E0,CV;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:325:36: warning: 'Hcorr' may be used uninitialized in this function [-Wmaybe-uninitialized]
S0MT += 1000*eFactor*(Hcorr-Gcorr)/temperature;
~~~~~~^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:450:17: note: 'Hcorr' was declared here
double ezpe,Hcorr,Gcorr,E0,CV;
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:320:29: warning: 'ezpe' may be used uninitialized in this function [-Wmaybe-uninitialized]
dhofMT = dhofM0+(Hcorr-ezpe)*eFactor;
~~~~~~^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/gaussformat.cpp:450:12: note: 'ezpe' was declared here
double ezpe,Hcorr,Gcorr,E0,CV;
^~~~
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/usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/cifformat.cpp: In member function 'void OpenBabel::CIFData::CalcMatrices()':
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float aa,bb,cc,alphaa,betaa,gammaa;//reciprocal space parameters
^~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obfit.dir/obfit.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/tools/obfit.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obenergy.dir/link.txt --verbose=1
/usr/bin/c++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obenergy.dir/obenergy.cpp.o -o ../bin/obenergy ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz
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make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend
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cd /usr/src/RPM/BUILD/openbabel-2.4.1 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/tools /usr/src/RPM/BUILD/openbabel-2.4.1 /usr/src/RPM/BUILD/openbabel-2.4.1/tools /usr/src/RPM/BUILD/openbabel-2.4.1/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color=
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/usr/bin/c++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obfit.dir/obfit.cpp.o -o ../bin/obfit ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz
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/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../../lib64/cifformat.so CMakeFiles/cifformat.dir/cifformat.cpp.o -lm -ldl -lz -lcairo ../../lib64/libinchi.so.0.4.1 -lm ../../lib64/libopenbabel.so.5.0.0 -lcairo -lc -lm -ldl -lz
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[ 85%] Building CXX object tools/CMakeFiles/obthermo.dir/obthermo.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obthermo.dir/obthermo.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/tools/obthermo.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/tools/obthermo.cpp: In function 'int main(int, char**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/tools/obthermo.cpp:158:18: warning: unused variable 'Rgas' [-Wunused-variable]
double Rgas = 1.9872041; // cal/mol K
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/tools/obthermo.cpp:42:10: warning: variable 'bKJ' set but not used [-Wunused-but-set-variable]
bool bKJ = false;
^~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obthermo.dir/link.txt --verbose=1
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[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/test_runner.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/test_runner.cpp
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[ 85%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obrotate.dir/obrotate.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/tools/obrotate.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/tools/obrotate.cpp: In function 'int main(int, char**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/tools/obrotate.cpp:154:21: warning: 'a4' may be used uninitialized in this function [-Wmaybe-uninitialized]
mol.SetTorsion(a1, a2, a3, a4, angle * DEG_TO_RAD);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/tools/obrotate.cpp:149:28: warning: 'a3' may be used uninitialized in this function [-Wmaybe-uninitialized]
if ( !a2->IsConnected(a3) ) {
~~~~~~~~~~~~~~~^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/tools/obrotate.cpp:149:28: warning: 'a2' may be used uninitialized in this function [-Wmaybe-uninitialized]
/usr/src/RPM/BUILD/openbabel-2.4.1/tools/obrotate.cpp:154:21: warning: 'a1' may be used uninitialized in this function [-Wmaybe-uninitialized]
mol.SetTorsion(a1, a2, a3, a4, angle * DEG_TO_RAD);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 85%] Building CXX object tools/CMakeFiles/obsym.dir/obsym.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obsym.dir/obsym.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/tools/obsym.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1
/usr/bin/c++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obrotate.dir/obrotate.cpp.o -o ../bin/obrotate ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obprobe.dir/obprobe.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/tools/obprobe.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obtautomer.dir/obtautomer.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/tools/obtautomer.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/inchiwrite.cpp
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/usr/bin/c++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obprobe.dir/obprobe.cpp.o -o ../bin/obprobe ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obminimize.dir/obminimize.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/tools/obminimize.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obminimize.dir/link.txt --verbose=1
/usr/bin/c++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obminimize.dir/obminimize.cpp.o -o ../bin/obminimize ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/formats/getinchi.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1
/usr/bin/c++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -o ../bin/test_inchiwrite ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz
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make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 87%] Building CXX object src/GUI/CMakeFiles/obgui.dir/stdwx.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/. -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obgui.dir/stdwx.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/stdwx.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/./stdwx.h:50,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/stdwx.cpp:1:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/./babel.xpm:2:20: warning: 'sample_xpm' defined but not used [-Wunused-variable]
static const char *sample_xpm[] = {
^~~~~~~~~~
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[ 87%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/roundtrip.dir/roundtrip.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/roundtrip.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1
/usr/bin/c++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/roundtrip.dir/roundtrip.cpp.o -o ../bin/roundtrip ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/automorphismtest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/automorphismtest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/automorphismtest.cpp: In function 'bool doAutomorphismTest(OpenBabel::OBMol&, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/test/automorphismtest.cpp:15:20: warning: comparison of integer expressions of different signedness: 'std::vector<std::vector<std::pair<unsigned int, unsigned int> > >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
return (G.size() == numAutomorphisms);
~~~~~~~~~^~~~~~~~~~~~~~~~~~~
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[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/buildertest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/buildertest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/buildertest.cpp:15:21: warning: 'failed' defined but not used [-Wunused-variable]
static unsigned int failed = 0;
^~~~~~
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[ 87%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/. -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obgui.dir/optswx.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/optswx.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/optswx.cpp: In member function 'bool DynOptionswx::Construct(const char*, const char*, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/optswx.cpp:223:16: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
if(pdef=strcasestr(pCaption,"default"))
~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/optswx.cpp:226:17: warning: unused variable 'tok' [-Wunused-variable]
char* tok=strtok(pdef," :-\t</\"\'");
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/optswx.cpp:293:60: warning: statement has no effect [-Wunused-value]
strcasecmp(pdef,"no") && !strcasecmp(pdef,"not") && strcasecmp(pdef,"none");
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/./stdwx.h:50,
from /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/optswx.cpp:19:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/./babel.xpm: At global scope:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/./babel.xpm:2:20: warning: 'sample_xpm' defined but not used [-Wunused-variable]
static const char *sample_xpm[] = {
^~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/canonconsistenttest.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/canonstabletest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/canonstabletest.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 87%] Building CXX object test/CMakeFiles/test_runner.dir/aligntest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/aligntest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/aligntest.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/test/aligntest.cpp:3:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/test/aligntest.cpp:3:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/test/aligntest.cpp:3:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
In file included from /usr/include/eigen2/Eigen/Core:125,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/test/aligntest.cpp:3:
/usr/include/eigen2/Eigen/src/Core/Assign.h: In instantiation of 'static void Eigen::ei_assign_impl<Derived1, Derived2, 1, 0>::run(Derived1&, const Derived2&) [with Derived1 = Eigen::Matrix<double, 10000, 10000>; Derived2 = Eigen::Matrix<double, 10000, 10000>]':
/usr/include/eigen2/Eigen/src/Core/Assign.h:432:45: required from 'Derived& Eigen::MatrixBase<Derived>::lazyAssign(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000>; Derived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Assign.h:447:123: required from 'static Derived& Eigen::ei_assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<double, 10000, 10000>; OtherDerived = Eigen::Matrix<double, 10000, 10000>]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:554:64: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::_set_noalias(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::Matrix<double, 10000, 10000>; _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/include/eigen2/Eigen/src/Core/Matrix.h:415:7: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 10000; int _Cols = 10000; int _Options = 2; int _MaxRows = 10000; int _MaxCols = 10000]'
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:66:15: required from here
/usr/include/eigen2/Eigen/src/Core/Assign.h:332:80: warning: enum constant in boolean context [-Wint-in-bool-context]
const int alignedStart = ei_assign_traits<Derived1,Derived2>::DstIsAligned ? 0
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
: ei_alignmentOffset(&dst.coeffRef(0), size);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 89%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/carspacegrouptest.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 87%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/. -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/obgui.dir/OBGUI.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:26:
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/./selformats.h: In member function 'bool ActiveFormats::Add(wxString&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/./selformats.h:82:52: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
return (ActiveFormatsString.find(format+_T(';')) != -1);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp: In member function 'virtual bool OBGUIApp::OnInit()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:129:21: warning: unused variable 'splash' [-Wunused-variable]
wxSplashScreen* splash = new wxSplashScreen(bitmap,
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::DisplayInputFiles(wxArrayString)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:766:12: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
for(i=0;i<filepatharray.GetCount();++i)
~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp: In member function 'bool OBGUIFrame::SetChoice(wxChoice*, const wxString&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:890:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for(int iSel=0;iSel<pChoice->GetCount();iSel++)
~~~~^~~~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp: In member function 'wxString OBGUIFrame::ShortenedPath(const wxString&, const wxWindow&, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:934:10: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if(pos1==wxNOT_FOUND || pos1+1 == path.length()) return path;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:936:10: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if(pos1==wxNOT_FOUND || pos1+1 == path.length()) return path;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:943:12: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if(pos2==wxNOT_FOUND || pos2+1 == tpath.length()) return path;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:946:46: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if(tpath.find_first_of(_T("/\\"), pos2+1)==wxNOT_FOUND) return path;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::GetAvailableFormats()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:1000:13: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare]
if(pos!=wxString::npos)
~~~^~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:1005:11: warning: variable 'n' set but not used [-Wunused-but-set-variable]
int n;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::MakePluginsMenu()':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:1101:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int itop=0; itop < topvec.size(); ++itop)
~~~~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:1109:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(int isub=0; isub < subvec.size(); ++isub)
~~~~~^~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp: In member function 'void CFilenames::OnKeyPress(wxKeyEvent&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:1187:50: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
if(nameWithWildcard.find_first_of(_T("*?"))==wxNOT_FOUND)
^
/usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI/OBGUI.cpp:1203:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
for(i=0;i<filelist.size();++i)
~^~~~~~~~~~~~~~~~
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make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 90%] Linking CXX executable ../../bin/obgui
cd /usr/src/RPM/BUILD/openbabel-2.4.1/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1
/usr/bin/c++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/obgui.dir/OBGUI.cpp.o CMakeFiles/obgui.dir/stdwx.cpp.o CMakeFiles/obgui.dir/optswx.cpp.o -o ../../bin/obgui ../../lib64/libopenbabel.so.5.0.0 -L/usr/lib64 -pthread -L/usr/lib64 -lwx_baseu-2.8 -lwx_gtk2u_core-2.8 -lwx_gtk2u_adv-2.8 -lm -ldl -lz
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[ 90%] Built target obgui
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/cifspacegrouptest.cpp
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[ 90%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/implicitHtest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/implicitHtest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/cistranstest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/cistranstest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/cistranstest.cpp:144:3: warning: multi-line comment [-Wcomment]
// / \ | | / / \
^
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/gziptest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/gziptest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/graphsymtest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/graphsymtest.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/test/graphsymtest.cpp:1:
/usr/src/RPM/BUILD/openbabel-2.4.1/test/graphsymtest.cpp: In function 'void countGraphSymClassesTest(const string&, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/test/graphsymtest.cpp:108:16: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
OB_ASSERT( n == numberOfClasses);
~~^~~~~~~~~~~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/test/obtest.h:27:6: note: in definition of macro 'OB_ASSERT'
( (exp) ? static_cast<void>(0) : report_error(#exp, __FILE__, __LINE__, FUNCTION_SIGNATURE, false) )
^~~
/usr/src/RPM/BUILD/openbabel-2.4.1/test/graphsymtest.cpp:109:9: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (n != numberOfClasses) {
~~^~~~~~~~~~~~~~~~~~
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/lssrtest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/lssrtest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/lssrtest.cpp: In function 'bool verifyLSSR(const string&, const LSSR&)':
/usr/src/RPM/BUILD/openbabel-2.4.1/test/lssrtest.cpp:170:8: warning: unused variable 'fail' [-Wunused-variable]
bool fail = false;
^~~~
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/isomorphismtest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/isomorphismtest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/isomorphismtest.cpp:112:3: warning: multi-line comment [-Wcomment]
// /\ /\ /\
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/isomorphismtest.cpp:163:3: warning: multi-line comment [-Wcomment]
// /\ /\ /\
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/isomorphismtest.cpp:185:3: warning: multi-line comment [-Wcomment]
// /\ /\ /\
^
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/regressionstest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/regressionstest.cpp
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/test/regressionstest.cpp:1:
/usr/src/RPM/BUILD/openbabel-2.4.1/test/obtest.h: In instantiation of 'void ob_compare(T1, T2, const char*, const char*, int, const char*) [with T1 = unsigned int; T2 = int]':
/usr/src/RPM/BUILD/openbabel-2.4.1/test/regressionstest.cpp:102:3: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/test/obtest.h:22:11: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if (!(a == b))
~~~^~~~~
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[ 91%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/rotortest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/rotortest.cpp
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[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/squareplanartest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/squareplanartest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/squareplanartest.cpp:56:3: warning: multi-line comment [-Wcomment]
// / \ | | |/ | / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/squareplanartest.cpp:99:3: warning: multi-line comment [-Wcomment]
// / \ | | |/ | / \
^
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/spectrophoretest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/spectrophoretest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/smilestest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/smilestest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/tautomertest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/tautomertest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/tetrahedraltest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/shuffletest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/shuffletest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/uniqueidtest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/uniqueidtest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/tetranonplanartest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/tetranonplanartest.cpp:22:1: warning: multi-line comment [-Wcomment]
// \
^
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/tetraplanartest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/tetraplanartest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/tetraplanartest.cpp:11:1: warning: multi-line comment [-Wcomment]
// \
^
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/stereotest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp: In function 'bool doStereoPerception(OpenBabel::OBMol&, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:100:12: warning: enumeration value 'ExtendedCisTrans' not handled in switch [-Wswitch]
switch (units.at(i).type) {
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:100:12: warning: enumeration value 'SquarePlanar' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:100:12: warning: enumeration value 'ExtendedTetrahedral' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:100:12: warning: enumeration value 'TrigonalBipyramidal' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:100:12: warning: enumeration value 'Octahedral' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp: In function 'bool doStereoPerception2(OpenBabel::OBMol&, int, int)':
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:130:12: warning: enumeration value 'ExtendedCisTrans' not handled in switch [-Wswitch]
switch (units.at(i).type) {
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:130:12: warning: enumeration value 'SquarePlanar' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:130:12: warning: enumeration value 'ExtendedTetrahedral' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:130:12: warning: enumeration value 'TrigonalBipyramidal' not handled in switch [-Wswitch]
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereotest.cpp:130:12: warning: enumeration value 'Octahedral' not handled in switch [-Wswitch]
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 92%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:255:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:270:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:285:5: warning: multi-line comment [-Wcomment]
// \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:287:5: warning: multi-line comment [-Wcomment]
// \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:310:5: warning: multi-line comment [-Wcomment]
// \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:329:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:339:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:349:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:366:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:377:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:390:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:401:5: warning: multi-line comment [-Wcomment]
// / \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:432:5: warning: multi-line comment [-Wcomment]
// \
^
/usr/src/RPM/BUILD/openbabel-2.4.1/test/stereoperceptiontest.cpp:434:5: warning: multi-line comment [-Wcomment]
// \
^
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/bond.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/bond.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/bond.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/atom.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/atom.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/atom.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/aromatest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/aromatest.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/cansmi.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/cansmi.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 94%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/charge_mmff94.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/charge_mmff94.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/conversion.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/conversion.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/charge_gasteiger.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/datatest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/datatest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/ffgaff.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/ffgaff.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/ffghemical.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/ffghemical.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/ffmmff94.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/ffmmff94.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/format.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/format.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/formalcharge.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/formalcharge.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/ffuff.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/ffuff.cpp
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[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formula.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/formula.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/formula.cpp
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[ 96%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/internalcoord.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/internalcoord.cpp
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[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/invalidsmarts.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/invalidsmarts.cpp
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[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/invalidsmiles.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/invalidsmiles.cpp
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[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/math.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/math.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/math.cpp
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[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/logp_psa.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/logp_psa.cpp
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[ 97%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/iterators.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/iterators.cpp
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[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/mol.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/mol.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/mol.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/residue.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/residue.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/smartsparse.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/smartsparse.cpp
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[ 98%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/phmodel.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/phmodel.cpp
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[ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/smilesmatch.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/smilesmatch.cpp
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[ 99%] Building CXX object test/CMakeFiles/test_runner.dir/obtest.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/obtest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/obtest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/ringtest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/ringtest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/smartstest.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/smartstest.cpp
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cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/cmlreadfile.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/cmlreadfile.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 99%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/src/RPM/BUILD/openbabel-2.4.1/test -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -DTESTDATADIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/test/files/\"" -DFORMATDIR="\"/usr/src/RPM/BUILD/openbabel-2.4.1/lib64//\"" -DTESTDIR=/usr/src/RPM/BUILD/openbabel-2.4.1/test -o CMakeFiles/test_runner.dir/unitcell.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/test/unitcell.cpp
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[100%] Linking CXX executable ../bin/test_runner
cd /usr/src/RPM/BUILD/openbabel-2.4.1/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_runner.dir/link.txt --verbose=1
/usr/bin/c++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -rdynamic CMakeFiles/test_runner.dir/test_runner.cpp.o CMakeFiles/test_runner.dir/aligntest.cpp.o CMakeFiles/test_runner.dir/automorphismtest.cpp.o CMakeFiles/test_runner.dir/buildertest.cpp.o CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o CMakeFiles/test_runner.dir/canonstabletest.cpp.o CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o CMakeFiles/test_runner.dir/cistranstest.cpp.o CMakeFiles/test_runner.dir/graphsymtest.cpp.o CMakeFiles/test_runner.dir/gziptest.cpp.o CMakeFiles/test_runner.dir/implicitHtest.cpp.o CMakeFiles/test_runner.dir/lssrtest.cpp.o CMakeFiles/test_runner.dir/isomorphismtest.cpp.o CMakeFiles/test_runner.dir/multicmltest.cpp.o CMakeFiles/test_runner.dir/regressionstest.cpp.o CMakeFiles/test_runner.dir/rotortest.cpp.o CMakeFiles/test_runner.dir/shuffletest.cpp.o CMakeFiles/test_runner.dir/smilestest.cpp.o CMakeFiles/test_runner.dir/spectrophoretest.cpp.o CMakeFiles/test_runner.dir/squareplanartest.cpp.o CMakeFiles/test_runner.dir/stereotest.cpp.o CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o CMakeFiles/test_runner.dir/tautomertest.cpp.o CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o CMakeFiles/test_runner.dir/tetraplanartest.cpp.o CMakeFiles/test_runner.dir/uniqueidtest.cpp.o CMakeFiles/test_runner.dir/aromatest.cpp.o CMakeFiles/test_runner.dir/atom.cpp.o CMakeFiles/test_runner.dir/bond.cpp.o CMakeFiles/test_runner.dir/cansmi.cpp.o CMakeFiles/test_runner.dir/charge_mmff94.cpp.o CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o CMakeFiles/test_runner.dir/conversion.cpp.o CMakeFiles/test_runner.dir/datatest.cpp.o CMakeFiles/test_runner.dir/ffgaff.cpp.o CMakeFiles/test_runner.dir/ffghemical.cpp.o CMakeFiles/test_runner.dir/ffmmff94.cpp.o CMakeFiles/test_runner.dir/ffuff.cpp.o CMakeFiles/test_runner.dir/formalcharge.cpp.o CMakeFiles/test_runner.dir/format.cpp.o CMakeFiles/test_runner.dir/formula.cpp.o CMakeFiles/test_runner.dir/internalcoord.cpp.o CMakeFiles/test_runner.dir/invalidsmarts.cpp.o CMakeFiles/test_runner.dir/invalidsmiles.cpp.o CMakeFiles/test_runner.dir/iterators.cpp.o CMakeFiles/test_runner.dir/logp_psa.cpp.o CMakeFiles/test_runner.dir/math.cpp.o CMakeFiles/test_runner.dir/mol.cpp.o CMakeFiles/test_runner.dir/phmodel.cpp.o CMakeFiles/test_runner.dir/residue.cpp.o CMakeFiles/test_runner.dir/ringtest.cpp.o CMakeFiles/test_runner.dir/smartstest.cpp.o CMakeFiles/test_runner.dir/smartsparse.cpp.o CMakeFiles/test_runner.dir/smilesmatch.cpp.o CMakeFiles/test_runner.dir/unitcell.cpp.o CMakeFiles/test_runner.dir/cmlreadfile.cpp.o CMakeFiles/test_runner.dir/obtest.cpp.o -o ../bin/test_runner ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz
make[2]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[100%] Built target test_runner
make[1]: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
make[2]: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
[ 87%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o
cd /usr/src/RPM/BUILD/openbabel-2.4.1/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dbindings_python_EXPORTS -I/usr/src/RPM/BUILD/openbabel-2.4.1/include -I/usr/src/RPM/BUILD/openbabel-2.4.1/data -I/usr/include/python2.7 -isystem /usr/lib64/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -DOB_MODULE_PATH="\"/usr/usr/lib64/openbabel/2.4.1\"" -o CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o -c /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp
In file included from /usr/include/eigen2/Eigen/Core:103,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3455:
/usr/include/eigen2/Eigen/src/Core/util/Memory.h: In function 'Integer Eigen::ei_alignmentOffset(const Scalar*, Integer)':
/usr/include/eigen2/Eigen/src/Core/util/Memory.h:232:51: warning: typedef 'Packet' locally defined but not used [-Wunused-local-typedefs]
typedef typename ei_packet_traits<Scalar>::type Packet;
^~~~~~
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3455:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h: At global scope:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:36:44: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128> { typedef float type; enum {size=4}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:37:45: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128d> { typedef double type; enum {size=2}; };
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:38:45: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
template<> struct ei_unpacket_traits<__m128i> { typedef int type; enum {size=4}; };
^
In file included from /usr/include/eigen2/Eigen/Core:110,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/align.h:26,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3455:
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:265:36: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:288:37: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128i>
^
/usr/include/eigen2/Eigen/src/Core/arch/SSE/PacketMath.h:311:37: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes]
struct ei_palign_impl<Offset,__m128d>
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_SwigPyIterator___sub__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:7799:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_SwigPyIterator___sub____SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:7799:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_SwigPyIterator___sub____SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vectorInt___setitem__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8051:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_vectorInt___setitem____SWIG_0(self, argc, argv);} check_2: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8051:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_vectorInt___setitem____SWIG_0(self, argc, argv);} check_2: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorInt__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8074:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8074:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorUnsignedInt__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8402:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8402:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vectorvInt___setitem____SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8710:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8710:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorvInt__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8740:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8740:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorvInt__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8765:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8765:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vectorDouble___setitem__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9048:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_vectorDouble___setitem____SWIG_0(self, argc, argv);} check_2: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9048:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_vectorDouble___setitem____SWIG_0(self, argc, argv);} check_2: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorDouble__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9071:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9071:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorULong__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9401:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9401:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vectorString___setitem____SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9703:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9703:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorString__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9733:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9733:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorString__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9756:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9756:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorVector3__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10072:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10072:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vectorvVector3___setitem____SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10403:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10403:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorvVector3__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10435:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10435:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorvVector3__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10460:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10460:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorOBMol__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10775:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10775:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorOBBond__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:11114:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:11114:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorOBResidue__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:11456:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:11456:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorOBRing__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:11795:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:11795:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorpOBRing__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:12133:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:12133:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorpOBGenericData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:12479:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:12479:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vectorpOBInternalCoord__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:12843:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:12843:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_pairUIntUInt__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:12926:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:12926:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vpairUIntUInt___setitem____SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13271:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13271:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vpairUIntUInt__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13302:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13302:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vpairUIntUInt__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13327:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13327:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vvpairUIntUInt___setitem____SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13641:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13641:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vvpairUIntUInt_append(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13685:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13685:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vvpairUIntUInt__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13705:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13705:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vvpairUIntUInt__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13918:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13918:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vvpairUIntUInt_push_back(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13949:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13949:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vvpairUIntUInt_assign(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13995:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13995:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vvpairUIntUInt_resize__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14017:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14017:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vvpairUIntUInt_insert__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14056:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14056:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vvpairUIntUInt_insert__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14087:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14087:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBGlobalDataBase_SetReadDirectory(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14380:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14380:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBGlobalDataBase_SetEnvironmentVariable(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14391:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14391:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBGlobalDataBase_ParseLine(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14402:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14402:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBElement__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14458:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14458:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBElementTable_GetAtomicNum__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14615:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14615:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBElementTable_GetAtomicNum__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14632:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:14632:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBTypeTable_SetFromType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15091:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15091:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBTypeTable_SetToType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15103:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15103:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBTypeTable_Translate__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15118:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15118:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15119:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15119:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBTypeTable_Translate__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15138:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15138:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBResidueData_SetResName(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15206:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15206:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBResidueData_LookupBO__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15219:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15219:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBResidueData_LookupBO__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15238:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15238:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15239:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15239:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBResidueData_LookupType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15270:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15270:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_vector3(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15665:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap_new_vector3__SWIG_5(self, argc, argv);} check_3: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15665:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap_new_vector3__SWIG_5(self, argc, argv);} check_3: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vector3___iadd__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15863:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_vector3___iadd____SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15863:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_vector3___iadd____SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vector3___isub__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15882:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_vector3___isub____SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15882:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_vector3___isub____SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_vector3___imul__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15931:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_vector3___imul____SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:15931:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_vector3___imul____SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap___mul__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16256:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { { int res = SWIG_AsVal_double(argv[1], NULL); _v = SWIG_CheckState(res); } }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16256:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { { int res = SWIG_AsVal_double(argv[1], NULL); _v = SWIG_CheckState(res); } }
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16257:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap___mul____SWIG_1(self, argc, argv);} check_1: if (argc == 2) { int _v = 0; {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16257:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap___mul____SWIG_1(self, argc, argv);} check_1: if (argc == 2) { int _v = 0; {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16259:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap___mul____SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16259:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap___mul____SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_transform3d(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16928:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; { int res = SWIG_ConvertPtr(argv[1], 0, SWIGTYPE_p_OpenBabel__vector3, 0); _v = SWIG_CheckState(res);}
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16928:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; { int res = SWIG_ConvertPtr(argv[1], 0, SWIGTYPE_p_OpenBabel__vector3, 0); _v = SWIG_CheckState(res);}
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16929:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap_new_transform3d__SWIG_1(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16929:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap_new_transform3d__SWIG_1(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_transform3d___mul__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16971:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_transform3d___mul____SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:16971:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_transform3d___mul____SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_SpaceGroup_SetHMName__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17037:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17037:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_SpaceGroup_SetHMName__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17049:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17049:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_SpaceGroup_SetHallName__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17067:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17067:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_SpaceGroup_SetHallName__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17079:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17079:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_SpaceGroup_AddTransform(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17111:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17111:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_SpaceGroup_GetSpaceGroup__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17200:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17200:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_SpaceGroup_GetSpaceGroup__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17210:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17210:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBGenericData_SetAttribute(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17371:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17371:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBase_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17498:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17498:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBase_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17511:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17511:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBase_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17522:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17522:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBase_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17590:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17590:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBase_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17599:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap_OBBase_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17599:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap_OBBase_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBase_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17648:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17648:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBase_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17660:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17660:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBCommentData_SetData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17776:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17776:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBCommentData_SetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17786:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:17786:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPairData_SetValue__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18002:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18002:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPairData_SetValue__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18014:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18014:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBSetData_GetData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18084:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18084:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBSetData_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18097:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18097:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBUnitCell_SetSpaceGroup(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18534:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_OBUnitCell_SetSpaceGroup__SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:18534:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_OBUnitCell_SetSpaceGroup__SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBVibrationData_SetData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20135:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20135:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20136:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20136:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBVibrationData_SetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20169:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20169:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20170:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20170:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20171:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res5)) delete arg5; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20171:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res5)) delete arg5; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBDOSData_SetData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20282:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res5)) delete arg5; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20282:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res5)) delete arg5; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20283:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20283:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBElectronicTransitionData_SetEDipole(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20663:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20663:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBElectronicTransitionData_SetRotatoryStrengthsVelocity(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20679:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20679:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBElectronicTransitionData_SetRotatoryStrengthsLength(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20695:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:20695:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBGridData_GetAxes(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21230:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_double, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21230:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_double, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBGridData_SetLimits(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21472:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { int res = SWIG_ConvertPtr(argv[2], 0, SWIGTYPE_p_OpenBabel__vector3, 0); _v = SWIG_CheckState(res);}
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21472:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { int res = SWIG_ConvertPtr(argv[2], 0, SWIGTYPE_p_OpenBabel__vector3, 0); _v = SWIG_CheckState(res);}
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21473:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { int res = SWIG_ConvertPtr(argv[3], 0, SWIGTYPE_p_OpenBabel__vector3, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21473:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { int res = SWIG_ConvertPtr(argv[3], 0, SWIGTYPE_p_OpenBabel__vector3, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21476:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBGridData_SetLimits__SWIG_0(self, argc, argv);} check_1: if (argc == 5) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21476:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBGridData_SetLimits__SWIG_0(self, argc, argv);} check_1: if (argc == 5) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBGridData_SetValues(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21514:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21514:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_CharPtrLess___call__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21930:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21930:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21931:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21931:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPlugin_Display__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21997:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return resultobj; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21997:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return resultobj; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21998:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:21998:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPlugin_Display__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22015:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22015:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPlugin_MakeInstance(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22038:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22038:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPlugin_GetPlugin(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22058:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22058:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22059:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22059:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPlugin_ListAsVector(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22085:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22085:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22086:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22086:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPlugin_List__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22119:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22119:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPlugin_ListAsString__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22138:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22138:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22139:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22139:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPlugin_Begin(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22171:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22171:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBPlugin_End(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22180:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22180:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBError__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22257:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22257:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22258:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22258:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22259:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22259:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22260:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22260:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBError__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22292:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22292:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22293:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22293:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22294:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22294:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22295:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22295:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; if (SWIG_IsNewObj(res5)) delete arg5; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBError__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22322:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22322:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22323:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22323:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22324:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22324:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; if (SWIG_IsNewObj(res4)) delete arg4;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBError__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22346:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22346:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22348:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22348:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBError__SWIG_4(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22364:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22364:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22365:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22365:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBError__SWIG_5(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22375:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22375:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMessageHandler_ThrowError__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22544:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22544:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22545:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22545:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMessageHandler_ThrowError__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22566:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22566:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22567:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22567:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMessageHandler_ThrowError__SWIG_4(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22585:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22585:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22586:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22586:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMessageHandler_ThrowError(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22591:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; { { int res = SWIG_AsVal_int(argv[2], NULL); _v = SWIG_CheckState(res); } } if (!_v) goto check_2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22591:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; { { int res = SWIG_AsVal_int(argv[2], NULL); _v = SWIG_CheckState(res); } } if (!_v) goto check_2;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFormat_FindType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22805:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22805:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFormat_RegisterFormat__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22931:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22931:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22932:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22932:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFormat_RegisterFormat__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22943:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22943:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFormat_Display__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22971:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return resultobj; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22971:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return resultobj; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22972:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22972:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFormat_Display__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22989:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:22989:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFormat_FormatFromMIME(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23005:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23005:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBConversion(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23081:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap_new_OBConversion__SWIG_5(self, argc, argv);} check_3: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23081:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap_new_OBConversion__SWIG_5(self, argc, argv);} check_3: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23085:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_5; return _wrap_new_OBConversion__SWIG_0(self, argc, argv);} check_5: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23085:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_5; return _wrap_new_OBConversion__SWIG_0(self, argc, argv);} check_5: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_RegisterFormat__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23116:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23116:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23117:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23117:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_RegisterFormat__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23129:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23129:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_FindFormat__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23146:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23146:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_FindFormat(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23158:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBConversion_FindFormat__SWIG_1(self, argc, argv);} check_1: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23158:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBConversion_FindFormat__SWIG_1(self, argc, argv);} check_1: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_FormatFromExt__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23171:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23171:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_FormatFromExt__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23185:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23185:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_FormatFromExt(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23210:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBConversion_FormatFromExt__SWIG_2(self, argc, argv);} check_1: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23210:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBConversion_FormatFromExt__SWIG_2(self, argc, argv);} check_1: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_FormatFromMIME(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23228:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23228:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetInAndOutFormats__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23333:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23333:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23334:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23334:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetInAndOutFormats__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23351:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23351:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23352:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23352:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetInAndOutFormats__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23367:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23367:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23368:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23368:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetInAndOutFormats(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23426:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23426:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23431:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23431:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23436:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_5; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23436:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_5; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBFormat, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetInFormat__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23460:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23460:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetInFormat__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23472:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23472:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetInFormat(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23504:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap_OBConversion_SetInFormat__SWIG_2(self, argc, argv);} check_3: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23504:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap_OBConversion_SetInFormat__SWIG_2(self, argc, argv);} check_3: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetOutFormat__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23524:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23524:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetOutFormat__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23536:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23536:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetOutFormat(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23568:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap_OBConversion_SetOutFormat__SWIG_2(self, argc, argv);} check_3: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23568:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap_OBConversion_SetOutFormat__SWIG_2(self, argc, argv);} check_3: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_IsOption__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23681:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23681:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_IsOption__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23693:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23693:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_AddOption__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23747:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23747:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_AddOption__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23757:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23757:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_RemoveOption(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23782:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23782:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConversion_SetOptions(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23797:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:23797:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBResidue_SetName(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:24387:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:24387:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBResidue_SetAtomID(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:24473:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:24473:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBAtom_SetType__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25193:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25193:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBAtom_SetType__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25205:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25205:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBAtom_GetDistance(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25759:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBAtom_GetDistance__SWIG_1(self, argc, argv);} check_1: if (argc == 2) { int _v = 0; {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25759:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBAtom_GetDistance__SWIG_1(self, argc, argv);} check_1: if (argc == 2) { int _v = 0; {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25761:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_OBAtom_GetDistance__SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25761:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_OBAtom_GetDistance__SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBAtom_GetAngle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25797:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:25797:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBAtom_MatchesSMARTS(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:26407:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:26407:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBReaction_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27188:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27188:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBReaction_SetComment(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27201:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27201:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMol_GetBond(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27874:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27874:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMol_GetTorsion(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27941:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27941:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27944:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[4], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:27944:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[4], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMol_SetTitle__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:28168:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:28168:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMol_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:28184:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBMol_SetTitle__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:28184:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBMol_SetTitle__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMol_Rotate(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:28601:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBMol_Rotate__SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:28601:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBMol_Rotate__SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMol_AddHydrogens(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:28740:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_OBMol_AddHydrogens__SWIG_4(self, argc, argv);} check_2: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:28740:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_OBMol_AddHydrogens__SWIG_4(self, argc, argv);} check_2: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMol_SetTorsion(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29576:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29576:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[2], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29579:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[4], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29579:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; { void *vptr = 0; int res = SWIG_ConvertPtr(argv[4], &vptr, SWIGTYPE_p_OpenBabel__OBAtom, 0);
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_ThrowError__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29603:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29603:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_ThrowError(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29615:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_ThrowError__SWIG_1(self, argc, argv);} check_1: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29615:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_ThrowError__SWIG_1(self, argc, argv);} check_1: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBRing_SetType__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29936:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29936:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBRing_SetType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29952:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBRing_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29952:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBRing_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBRing_IsMember(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29996:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBRing_IsMember__SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:29996:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBRing_IsMember__SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBSmartsPattern_Init__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30280:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30280:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBSmartsPattern_Init__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30293:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30293:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBSmartsPattern_RestrictedMatch(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30592:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap_OBSmartsPattern_RestrictedMatch__SWIG_2(self, argc, argv);} check_3: if (argc == 4) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30592:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap_OBSmartsPattern_RestrictedMatch__SWIG_2(self, argc, argv);} check_3: if (argc == 4) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_AliasData_SetAlias__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30872:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30872:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_AliasData_SetAlias__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30882:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:30882:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFingerprint_FindType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31079:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31079:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFingerprint_GetBit(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31124:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31124:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFingerprint_Tanimoto__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31262:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31262:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31263:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31263:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFingerprint_Tanimoto__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31278:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31278:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFingerprint_Tanimoto(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31282:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBFingerprint_Tanimoto__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31282:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBFingerprint_Tanimoto__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBFingerprint_FindFingerprint(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31302:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31302:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FptIndexHeader_fpid_set(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31374:3: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else memset(arg1->fpid,0,16*sizeof(char)); resultobj = SWIG_Py_Void(); return resultobj; fail: return NULL; }
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31374:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
else memset(arg1->fpid,0,16*sizeof(char)); resultobj = SWIG_Py_Void(); return resultobj; fail: return NULL; }
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FptIndexHeader_datafilename_set(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31393:3: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else memset(arg1->datafilename,0,256*sizeof(char)); resultobj = SWIG_Py_Void(); return resultobj; fail: return NULL; }
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31393:55: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
else memset(arg1->datafilename,0,256*sizeof(char)); resultobj = SWIG_Py_Void(); return resultobj; fail: return NULL; }
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_FastSearchIndexer(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31722:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; { { int res = SWIG_AsVal_int(argv[2], NULL); _v = SWIG_CheckState(res); } } if (!_v) goto check_2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31722:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; { { int res = SWIG_AsVal_int(argv[2], NULL); _v = SWIG_CheckState(res); } } if (!_v) goto check_2;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBDescriptor__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31784:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31784:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBDescriptor__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31792:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31792:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBDescriptor_FindType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31808:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31808:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBDescriptor_Display__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31987:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return resultobj; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31987:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return resultobj; fail: if (alloc3 == SWIG_NEWOBJ) delete[] buf3;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31988:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:31988:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBDescriptor_Display__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:32005:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:32005:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBDescriptor_AddProperties(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:32075:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:32075:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBDescriptor_DeleteProperties(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:32088:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:32088:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBForceField_FindType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33485:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33485:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBForceField_FindForceField__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33511:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33511:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBForceField_FindForceField__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33520:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33520:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBForceField_FindForceField(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33524:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBForceField_FindForceField__SWIG_0(self, argc, argv);} check_1: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33524:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBForceField_FindForceField__SWIG_0(self, argc, argv);} check_1: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBForceField_SetParameterFile(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33541:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33541:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBForceField_GetGrid(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33770:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return resultobj; fail: if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:33770:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return resultobj; fail: if (alloc4 == SWIG_NEWOBJ) delete[] buf4; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBForceField_OBFFLog__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:34205:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:34205:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBForceField_LineSearch(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:34627:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBForceField_LineSearch__SWIG_0(self, argc, argv);} check_1: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:34627:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBForceField_LineSearch__SWIG_0(self, argc, argv);} check_1: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBuilder_Connect(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35747:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_OBBuilder_Connect__SWIG_1(self, argc, argv);} check_2: if (argc == 4) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35747:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_OBBuilder_Connect__SWIG_1(self, argc, argv);} check_2: if (argc == 4) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBOp_FindType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35874:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35874:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBOp_Do__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35898:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35898:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBOp_Do__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35918:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35918:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBOp_Do__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35933:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:35933:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBChargeModel__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36033:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36033:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBChargeModel__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36042:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36042:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBChargeModel_FindType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36058:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36058:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBChargeModel_ComputeCharges__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36087:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36087:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc3 == SWIG_NEWOBJ) delete[] buf3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBChemTsfm_Init(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36176:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36176:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36177:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36177:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBIsomorphismMapper_GetInstance__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36384:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36384:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_MapsTo(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36667:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36667:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FindAutomorphisms__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36701:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36701:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FindAutomorphisms__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36732:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36732:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FindAutomorphisms__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36757:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36757:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FindAutomorphisms__SWIG_6(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36847:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36847:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FindAutomorphisms__SWIG_7(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36868:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36868:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FindAutomorphisms(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36873:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; { void *vptr = 0;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36873:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; { void *vptr = 0;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36877:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_FindAutomorphisms__SWIG_4(self, argc, argv);} check_2: if (argc == 3) { int _v = 0; {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36877:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_FindAutomorphisms__SWIG_4(self, argc, argv);} check_2: if (argc == 3) { int _v = 0; {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36879:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; { void *vptr = 0;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36879:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; { void *vptr = 0;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36884:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_5; { void *vptr = 0;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36884:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_5; { void *vptr = 0;
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36888:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_5; { { int res = SWIG_AsVal_size_t(argv[3], NULL); _v = SWIG_CheckState(res); } }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36888:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_5; { { int res = SWIG_AsVal_size_t(argv[3], NULL); _v = SWIG_CheckState(res); } }
^
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36889:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_5; return _wrap_FindAutomorphisms__SWIG_3(self, argc, argv);} check_5: if (argc == 4) { int _v = 0; {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36889:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_5; return _wrap_FindAutomorphisms__SWIG_3(self, argc, argv);} check_5: if (argc == 4) { int _v = 0; {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36893:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_6; return _wrap_FindAutomorphisms__SWIG_6(self, argc, argv);} check_6: if (argc == 4) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:36893:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_6; return _wrap_FindAutomorphisms__SWIG_6(self, argc, argv);} check_6: if (argc == 4) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_CompileSmilesQuery__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37265:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37265:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_CompileSmilesQuery__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37275:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37275:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_CanonicalLabels__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37316:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37316:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_CanonicalLabels__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37348:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37348:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_CanonicalLabels__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37377:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37377:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_CanonicalLabels__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37400:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37400:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBStereo_ContainsSameRefs(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37472:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1;
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37472:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1;
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37473:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37473:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBStereo_ContainsRef(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37487:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37487:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBStereo_NumInversions(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37499:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37499:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBStereo_Permutated(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37532:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:37532:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; return resultobj; fail: if (SWIG_IsNewObj(res1)) delete arg1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FindStereogenicUnits__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38338:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38338:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_FindStereogenicUnits__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38362:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38362:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38363:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38363:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBBitVec(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38400:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new_OBBitVec__SWIG_2(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38400:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new_OBBitVec__SWIG_2(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBitVec_FromVecInt(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38593:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38593:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBitVec_FromString(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38608:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38608:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBBitVec___ior__(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38694:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBBitVec___ior____SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38694:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBBitVec___ior____SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBRotorRule(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38798:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:38798:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return resultobj; fail: if (alloc1 == SWIG_NEWOBJ) delete[] buf1; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBRotamerList_AddRotamer(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:39982:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap_OBRotamerList_AddRotamer__SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:39982:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap_OBRotamerList_AddRotamer__SWIG_0(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:39984:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_OBRotamerList_AddRotamer__SWIG_1(self, argc, argv);} check_2: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:39984:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_OBRotamerList_AddRotamer__SWIG_1(self, argc, argv);} check_2: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConformerFilter_IsGood(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:40379:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:40379:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBConformerScore_Score(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:40543:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res4)) delete arg4; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:40543:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res4)) delete arg4; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBAlign__SWIG_6(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41191:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41191:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail:
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41192:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41192:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res1)) delete arg1; if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBAlign_SetRef(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41226:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41226:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBAlign_SetTarget(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41240:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41240:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBMolAtomIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41366:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBMolAtomIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41366:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBMolAtomIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_SetType__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41579:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41579:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_SetType__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41591:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:41591:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_GetDistance(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42143:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap__OBMolAtomIter_GetDistance__SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42143:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap__OBMolAtomIter_GetDistance__SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_GetAngle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42182:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolAtomIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42182:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolAtomIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_MatchesSMARTS(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42789:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42789:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42858:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42858:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42871:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42871:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42883:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42883:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42951:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42951:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42960:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap__OBMolAtomIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:42960:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap__OBMolAtomIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43010:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43010:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomIter_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43022:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43022:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBMolAtomDFSIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43139:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBMolAtomDFSIter__SWIG_2(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43139:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBMolAtomDFSIter__SWIG_2(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_SetType__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43365:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43365:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_SetType__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43377:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43377:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_SetType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43381:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolAtomDFSIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43381:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolAtomDFSIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_GetDistance(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43932:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolAtomDFSIter_GetDistance__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43932:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolAtomDFSIter_GetDistance__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_GetAngle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43973:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolAtomDFSIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:43973:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolAtomDFSIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_MatchesSMARTS(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44585:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44585:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44654:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44654:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44667:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44667:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44679:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44679:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44747:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44747:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44752:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolAtomDFSIter_DeleteData__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44752:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolAtomDFSIter_DeleteData__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44757:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap__OBMolAtomDFSIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44757:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap__OBMolAtomDFSIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44808:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44808:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomDFSIter_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44820:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44820:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBMolAtomBFSIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44937:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBMolAtomBFSIter__SWIG_2(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:44937:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBMolAtomBFSIter__SWIG_2(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_SetType__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45163:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45163:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_SetType__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45175:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45175:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_SetType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45179:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolAtomBFSIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45179:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolAtomBFSIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_GetDistance(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45730:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolAtomBFSIter_GetDistance__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45730:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolAtomBFSIter_GetDistance__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_GetAngle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45771:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolAtomBFSIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:45771:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolAtomBFSIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_MatchesSMARTS(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46383:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46383:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46452:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46452:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46465:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46465:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46477:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46477:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46545:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46545:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46550:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolAtomBFSIter_DeleteData__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46550:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolAtomBFSIter_DeleteData__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46555:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap__OBMolAtomBFSIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46555:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap__OBMolAtomBFSIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46606:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46606:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolAtomBFSIter_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46618:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46618:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new_OBMolBondBFSIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46735:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new_OBMolBondBFSIter__SWIG_2(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:46735:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new_OBMolBondBFSIter__SWIG_2(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMolBondBFSIter_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47489:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47489:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMolBondBFSIter_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47502:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47502:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMolBondBFSIter_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47514:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47514:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMolBondBFSIter_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47582:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47582:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMolBondBFSIter_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47591:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap_OBMolBondBFSIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47591:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap_OBMolBondBFSIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMolBondBFSIter_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47642:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47642:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_OBMolBondBFSIter_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47654:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47654:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBMolBondIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47761:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBMolBondIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:47761:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBMolBondIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolBondIter_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48503:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48503:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolBondIter_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48516:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48516:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolBondIter_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48528:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48528:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolBondIter_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48596:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48596:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolBondIter_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48605:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap__OBMolBondIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48605:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap__OBMolBondIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolBondIter_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48655:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48655:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolBondIter_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48667:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48667:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBAtomAtomIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48774:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBAtomAtomIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48774:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBAtomAtomIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_SetType__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48987:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48987:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_SetType__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48999:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:48999:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_SetType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:49003:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBAtomAtomIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:49003:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBAtomAtomIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_GetDistance(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:49552:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap__OBAtomAtomIter_GetDistance__SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:49552:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap__OBAtomAtomIter_GetDistance__SWIG_2(self, argc, argv);} check_2: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_GetAngle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:49591:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBAtomAtomIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:49591:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBAtomAtomIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_MatchesSMARTS(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50199:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50199:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50268:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50268:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50281:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50281:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50293:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50293:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50361:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50361:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50370:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap__OBAtomAtomIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50370:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap__OBAtomAtomIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50420:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50420:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomAtomIter_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50432:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50432:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBAtomBondIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50539:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBAtomBondIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:50539:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBAtomBondIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomBondIter_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51281:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51281:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomBondIter_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51294:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51294:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomBondIter_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51306:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51306:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomBondIter_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51374:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51374:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomBondIter_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51383:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap__OBAtomBondIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51383:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap__OBAtomBondIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomBondIter_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51433:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51433:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBAtomBondIter_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51445:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51445:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBResidueIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51552:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBResidueIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51552:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBResidueIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueIter_SetName(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51663:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51663:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueIter_SetAtomID(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51749:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:51749:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res3)) delete arg3; return resultobj; fail: if (SWIG_IsNewObj(res3)) delete arg3; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueIter_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52081:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52081:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueIter_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52094:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52094:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueIter_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52106:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52106:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueIter_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52174:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52174:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueIter_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52183:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap__OBResidueIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52183:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap__OBResidueIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueIter_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52233:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52233:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueIter_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52245:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52245:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBResidueAtomIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52352:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBResidueAtomIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52352:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBResidueAtomIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_SetType__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52569:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52569:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_SetType__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52581:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52581:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_SetType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52585:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBResidueAtomIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:52585:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBResidueAtomIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_GetDistance(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53138:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBResidueAtomIter_GetDistance__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53138:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBResidueAtomIter_GetDistance__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_GetAngle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53179:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBResidueAtomIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53179:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBResidueAtomIter_GetAngle__SWIG_1(self, argc, argv);} check_1: if (argc == 3) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_MatchesSMARTS(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53792:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53792:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_SetTitle(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53861:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53861:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_HasData__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53874:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53874:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_HasData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53886:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53886:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_DeleteData__SWIG_3(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53954:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53954:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_DeleteData(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53959:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBResidueAtomIter_DeleteData__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53959:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBResidueAtomIter_DeleteData__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53964:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_3; return _wrap__OBResidueAtomIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:53964:29: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_3; return _wrap__OBResidueAtomIter_DeleteData__SWIG_0(self, argc, argv);} check_3: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_GetData__SWIG_1(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54015:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54015:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (SWIG_IsNewObj(res2)) delete arg2; return resultobj; fail: if (SWIG_IsNewObj(res2)) delete arg2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBResidueAtomIter_GetData__SWIG_2(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54027:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54027:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBMolAngleIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54134:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBMolAngleIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54134:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBMolAngleIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBMolTorsionIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54213:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBMolTorsionIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54213:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBMolTorsionIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBMolPairIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54294:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBMolPairIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54294:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBMolPairIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap_new__OBMolRingIter(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54373:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_2; return _wrap_new__OBMolRingIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54373:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_2; return _wrap_new__OBMolRingIter__SWIG_1(self, argc, argv);} check_2: if (argc == 1) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolRingIter_SetType__SWIG_0(PyObject*, int, PyObject**)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54531:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54531:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return resultobj; fail: if (alloc2 == SWIG_NEWOBJ) delete[] buf2; return NULL; }
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In function 'PyObject* _wrap__OBMolRingIter_SetType(PyObject*, PyObject*)':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54547:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!_v) goto check_1; return _wrap__OBMolRingIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:54547:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!_v) goto check_1; return _wrap__OBMolRingIter_SetType__SWIG_1(self, argc, argv);} check_1: if (argc == 2) {
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In instantiation of 'static Type swig::traits_as<Type, swig::pointer_category>::as(PyObject*, bool) [with Type = std::vector<int>; PyObject = _object]':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4206:64: required from 'Type swig::as(PyObject*, bool) [with Type = std::vector<int>; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4769:20: required from 'swig::SwigPySequence_Ref<T>::operator T() const [with T = std::vector<int>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5040:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont<std::vector<int> >; Seq = std::vector<std::vector<int> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5062:12: required from 'static int swig::traits_asptr_stdseq<Seq, T>::asptr(PyObject*, swig::traits_asptr_stdseq<Seq, T>::sequence**) [with Seq = std::vector<std::vector<int> >; T = std::vector<int>; PyObject = _object; swig::traits_asptr_stdseq<Seq, T>::sequence = std::vector<std::vector<int> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5116:52: required from 'static int swig::traits_asptr<std::vector<_Tp> >::asptr(PyObject*, std::vector<_Tp>**) [with T = std::vector<int>; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4098:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector<std::vector<int> >; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:8551:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4181:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class std::vector<int>' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess]
memset(v_def,0,sizeof(Type));
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/oberror.h:28,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/matrix3x3.h:27,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3403:
/usr/include/c++/8/bits/stl_vector.h:339:11: note: 'class std::vector<int>' declared here
class vector : protected _Vector_base<_Tp, _Alloc>
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In instantiation of 'static Type swig::traits_as<Type, swig::pointer_category>::as(PyObject*, bool) [with Type = OpenBabel::vector3; PyObject = _object]':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4206:64: required from 'Type swig::as(PyObject*, bool) [with Type = OpenBabel::vector3; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4769:20: required from 'swig::SwigPySequence_Ref<T>::operator T() const [with T = OpenBabel::vector3]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5040:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont<OpenBabel::vector3>; Seq = std::vector<OpenBabel::vector3>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5062:12: required from 'static int swig::traits_asptr_stdseq<Seq, T>::asptr(PyObject*, swig::traits_asptr_stdseq<Seq, T>::sequence**) [with Seq = std::vector<OpenBabel::vector3>; T = OpenBabel::vector3; PyObject = _object; swig::traits_asptr_stdseq<Seq, T>::sequence = std::vector<OpenBabel::vector3>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5116:52: required from 'static int swig::traits_asptr<std::vector<_Tp> >::asptr(PyObject*, std::vector<_Tp>**) [with T = OpenBabel::vector3; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4098:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector<OpenBabel::vector3>; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:9883:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4181:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class OpenBabel::vector3' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess]
memset(v_def,0,sizeof(Type));
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3402:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/vector3.h:45:15: note: 'class OpenBabel::vector3' declared here
class OBAPI vector3
^~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In instantiation of 'static Type swig::traits_as<Type, swig::pointer_category>::as(PyObject*, bool) [with Type = std::vector<OpenBabel::vector3>; PyObject = _object]':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4206:64: required from 'Type swig::as(PyObject*, bool) [with Type = std::vector<OpenBabel::vector3>; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4769:20: required from 'swig::SwigPySequence_Ref<T>::operator T() const [with T = std::vector<OpenBabel::vector3>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5040:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont<std::vector<OpenBabel::vector3> >; Seq = std::vector<std::vector<OpenBabel::vector3> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5062:12: required from 'static int swig::traits_asptr_stdseq<Seq, T>::asptr(PyObject*, swig::traits_asptr_stdseq<Seq, T>::sequence**) [with Seq = std::vector<std::vector<OpenBabel::vector3> >; T = std::vector<OpenBabel::vector3>; PyObject = _object; swig::traits_asptr_stdseq<Seq, T>::sequence = std::vector<std::vector<OpenBabel::vector3> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5116:52: required from 'static int swig::traits_asptr<std::vector<_Tp> >::asptr(PyObject*, std::vector<_Tp>**) [with T = std::vector<OpenBabel::vector3>; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4098:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector<std::vector<OpenBabel::vector3> >; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10229:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4181:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class std::vector<OpenBabel::vector3>' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess]
memset(v_def,0,sizeof(Type));
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/oberror.h:28,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/matrix3x3.h:27,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3403:
/usr/include/c++/8/bits/stl_vector.h:339:11: note: 'class std::vector<OpenBabel::vector3>' declared here
class vector : protected _Vector_base<_Tp, _Alloc>
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In instantiation of 'static Type swig::traits_as<Type, swig::pointer_category>::as(PyObject*, bool) [with Type = OpenBabel::OBMol; PyObject = _object]':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4206:64: required from 'Type swig::as(PyObject*, bool) [with Type = OpenBabel::OBMol; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4769:20: required from 'swig::SwigPySequence_Ref<T>::operator T() const [with T = OpenBabel::OBMol]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5040:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont<OpenBabel::OBMol>; Seq = std::vector<OpenBabel::OBMol>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5062:12: required from 'static int swig::traits_asptr_stdseq<Seq, T>::asptr(PyObject*, swig::traits_asptr_stdseq<Seq, T>::sequence**) [with Seq = std::vector<OpenBabel::OBMol>; T = OpenBabel::OBMol; PyObject = _object; swig::traits_asptr_stdseq<Seq, T>::sequence = std::vector<OpenBabel::OBMol>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5116:52: required from 'static int swig::traits_asptr<std::vector<_Tp> >::asptr(PyObject*, std::vector<_Tp>**) [with T = OpenBabel::OBMol; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4098:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector<OpenBabel::OBMol>; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10587:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4181:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class OpenBabel::OBMol' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess]
memset(v_def,0,sizeof(Type));
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3411:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:113:14: note: 'class OpenBabel::OBMol' declared here
class OBAPI OBMol: public OBBase
^~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In instantiation of 'static Type swig::traits_as<Type, swig::pointer_category>::as(PyObject*, bool) [with Type = OpenBabel::OBBond; PyObject = _object]':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4206:64: required from 'Type swig::as(PyObject*, bool) [with Type = OpenBabel::OBBond; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4769:20: required from 'swig::SwigPySequence_Ref<T>::operator T() const [with T = OpenBabel::OBBond]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5040:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont<OpenBabel::OBBond>; Seq = std::vector<OpenBabel::OBBond, std::allocator<OpenBabel::OBBond> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5062:12: required from 'static int swig::traits_asptr_stdseq<Seq, T>::asptr(PyObject*, swig::traits_asptr_stdseq<Seq, T>::sequence**) [with Seq = std::vector<OpenBabel::OBBond, std::allocator<OpenBabel::OBBond> >; T = OpenBabel::OBBond; PyObject = _object; swig::traits_asptr_stdseq<Seq, T>::sequence = std::vector<OpenBabel::OBBond, std::allocator<OpenBabel::OBBond> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5116:52: required from 'static int swig::traits_asptr<std::vector<_Tp> >::asptr(PyObject*, std::vector<_Tp>**) [with T = OpenBabel::OBBond; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4098:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector<OpenBabel::OBBond, std::allocator<OpenBabel::OBBond> >; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:10926:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4181:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class OpenBabel::OBBond' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess]
memset(v_def,0,sizeof(Type));
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:43,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3411:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/bond.h:69:15: note: 'class OpenBabel::OBBond' declared here
class OBAPI OBBond: public OBBase
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In instantiation of 'static Type swig::traits_as<Type, swig::pointer_category>::as(PyObject*, bool) [with Type = OpenBabel::OBResidue; PyObject = _object]':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4206:64: required from 'Type swig::as(PyObject*, bool) [with Type = OpenBabel::OBResidue; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4769:20: required from 'swig::SwigPySequence_Ref<T>::operator T() const [with T = OpenBabel::OBResidue]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5040:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont<OpenBabel::OBResidue>; Seq = std::vector<OpenBabel::OBResidue, std::allocator<OpenBabel::OBResidue> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5062:12: required from 'static int swig::traits_asptr_stdseq<Seq, T>::asptr(PyObject*, swig::traits_asptr_stdseq<Seq, T>::sequence**) [with Seq = std::vector<OpenBabel::OBResidue, std::allocator<OpenBabel::OBResidue> >; T = OpenBabel::OBResidue; PyObject = _object; swig::traits_asptr_stdseq<Seq, T>::sequence = std::vector<OpenBabel::OBResidue, std::allocator<OpenBabel::OBResidue> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5116:52: required from 'static int swig::traits_asptr<std::vector<_Tp> >::asptr(PyObject*, std::vector<_Tp>**) [with T = OpenBabel::OBResidue; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4098:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector<OpenBabel::OBResidue, std::allocator<OpenBabel::OBResidue> >; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:11265:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4181:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class OpenBabel::OBResidue' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess]
memset(v_def,0,sizeof(Type));
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/atom.h:34,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:42,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3411:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/residue.h:50:14: note: 'class OpenBabel::OBResidue' declared here
class OBAPI OBResidue : public OBBase
^~~~~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In instantiation of 'static Type swig::traits_as<Type, swig::pointer_category>::as(PyObject*, bool) [with Type = OpenBabel::OBRing; PyObject = _object]':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4206:64: required from 'Type swig::as(PyObject*, bool) [with Type = OpenBabel::OBRing; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4769:20: required from 'swig::SwigPySequence_Ref<T>::operator T() const [with T = OpenBabel::OBRing]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5040:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont<OpenBabel::OBRing>; Seq = std::vector<OpenBabel::OBRing, std::allocator<OpenBabel::OBRing> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5062:12: required from 'static int swig::traits_asptr_stdseq<Seq, T>::asptr(PyObject*, swig::traits_asptr_stdseq<Seq, T>::sequence**) [with Seq = std::vector<OpenBabel::OBRing, std::allocator<OpenBabel::OBRing> >; T = OpenBabel::OBRing; PyObject = _object; swig::traits_asptr_stdseq<Seq, T>::sequence = std::vector<OpenBabel::OBRing, std::allocator<OpenBabel::OBRing> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5116:52: required from 'static int swig::traits_asptr<std::vector<_Tp> >::asptr(PyObject*, std::vector<_Tp>**) [with T = OpenBabel::OBRing; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4098:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector<OpenBabel::OBRing, std::allocator<OpenBabel::OBRing> >; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:11607:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4181:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class OpenBabel::OBRing' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess]
memset(v_def,0,sizeof(Type));
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/mol.h:50,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3411:
/usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/ring.h:39:15: note: 'class OpenBabel::OBRing' declared here
class OBAPI OBRing
^~~~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In instantiation of 'static Type swig::traits_as<Type, swig::pointer_category>::as(PyObject*, bool) [with Type = std::pair<unsigned int, unsigned int>; PyObject = _object]':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4206:64: required from 'Type swig::as(PyObject*, bool) [with Type = std::pair<unsigned int, unsigned int>; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4769:20: required from 'swig::SwigPySequence_Ref<T>::operator T() const [with T = std::pair<unsigned int, unsigned int>]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5040:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont<std::pair<unsigned int, unsigned int> >; Seq = std::vector<std::pair<unsigned int, unsigned int> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5062:12: required from 'static int swig::traits_asptr_stdseq<Seq, T>::asptr(PyObject*, swig::traits_asptr_stdseq<Seq, T>::sequence**) [with Seq = std::vector<std::pair<unsigned int, unsigned int> >; T = std::pair<unsigned int, unsigned int>; PyObject = _object; swig::traits_asptr_stdseq<Seq, T>::sequence = std::vector<std::pair<unsigned int, unsigned int> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5116:52: required from 'static int swig::traits_asptr<std::vector<_Tp> >::asptr(PyObject*, std::vector<_Tp>**) [with T = std::pair<unsigned int, unsigned int>; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4098:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector<std::pair<unsigned int, unsigned int> >; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13094:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4181:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'struct std::pair<unsigned int, unsigned int>' with no trivial copy-assignment; use assignment instead [-Wclass-memaccess]
memset(v_def,0,sizeof(Type));
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algobase.h:64,
from /usr/include/c++/8/bits/char_traits.h:39,
from /usr/include/c++/8/string:40,
from /usr/include/c++/8/stdexcept:39,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3322:
/usr/include/c++/8/bits/stl_pair.h:208:12: note: 'struct std::pair<unsigned int, unsigned int>' declared here
struct pair
^~~~
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp: In instantiation of 'static Type swig::traits_as<Type, swig::pointer_category>::as(PyObject*, bool) [with Type = std::vector<std::pair<unsigned int, unsigned int> >; PyObject = _object]':
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4206:64: required from 'Type swig::as(PyObject*, bool) [with Type = std::vector<std::pair<unsigned int, unsigned int> >; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4769:20: required from 'swig::SwigPySequence_Ref<T>::operator T() const [with T = std::vector<std::pair<unsigned int, unsigned int> >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5040:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont<std::vector<std::pair<unsigned int, unsigned int> > >; Seq = std::vector<std::vector<std::pair<unsigned int, unsigned int> > >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5062:12: required from 'static int swig::traits_asptr_stdseq<Seq, T>::asptr(PyObject*, swig::traits_asptr_stdseq<Seq, T>::sequence**) [with Seq = std::vector<std::vector<std::pair<unsigned int, unsigned int> > >; T = std::vector<std::pair<unsigned int, unsigned int> >; PyObject = _object; swig::traits_asptr_stdseq<Seq, T>::sequence = std::vector<std::vector<std::pair<unsigned int, unsigned int> > >]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:5116:52: required from 'static int swig::traits_asptr<std::vector<_Tp> >::asptr(PyObject*, std::vector<_Tp>**) [with T = std::vector<std::pair<unsigned int, unsigned int> >; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4098:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector<std::vector<std::pair<unsigned int, unsigned int> > >; PyObject = _object]'
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:13461:41: required from here
/usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:4181:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class std::vector<std::pair<unsigned int, unsigned int> >' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess]
memset(v_def,0,sizeof(Type));
~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/oberror.h:28,
from /usr/src/RPM/BUILD/openbabel-2.4.1/include/openbabel/math/matrix3x3.h:27,
from /usr/src/RPM/BUILD/openbabel-2.4.1/scripts/python/openbabel-python.cpp:3403:
/usr/include/c++/8/bits/stl_vector.h:339:11: note: 'class std::vector<std::pair<unsigned int, unsigned int> >' declared here
class vector : protected _Vector_base<_Tp, _Alloc>
^~~~~~
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[100%] Linking CXX shared module ../lib64/_openbabel.so
cd /usr/src/RPM/BUILD/openbabel-2.4.1/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_python.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/include/eigen2 -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -shared -o ../lib64/_openbabel.so CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o -lpython2.7 ../lib64/libopenbabel.so.5.0.0 -lm -ldl -lz
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[100%] Built target bindings_python
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make: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
+ exit 0
Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.20165
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ /bin/chmod -Rf u+rwX -- /usr/src/tmp/openbabel-buildroot
+ :
+ /bin/rm -rf -- /usr/src/tmp/openbabel-buildroot
+ cd openbabel-2.4.1
+ make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/openbabel-buildroot
make: Entering directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
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[ 21%] Built target plugin_forcefields
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[ 23%] Built target plugin_charges
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[ 31%] Built target inchi
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[ 31%] Built target cmlreactformat
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[ 32%] Built target xmlformat
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[ 33%] Built target xtcformat
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[ 34%] Built target chemdrawcdx
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[ 34%] Built target chemdoodlejsonformat
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[ 36%] Built target viewmolformat
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[ 36%] Built target yasaraformat
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[ 36%] Built target pdbqtformat
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[ 36%] Built target pcmodelformat
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[ 36%] Built target outformat
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[ 37%] Built target opendxformat
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[ 38%] Built target rsmiformat
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[ 40%] Built target mpdformat
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[ 40%] Built target pointcloudformat
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[ 40%] Built target mmcifformat
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[ 40%] Built target mdffformat
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[ 40%] Built target xedformat
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[ 40%] Built target lpmdformat
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[ 40%] Built target groformat
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[ 41%] Built target pubchemjsonformat
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[ 41%] Built target gausszmatformat
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[ 41%] Built target gausscubeformat
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[ 41%] Built target adfformat
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[ 41%] Built target cdxmlformat
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[ 42%] Built target daltonformat
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[ 43%] Built target asciiformat
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[ 43%] Built target rxnformat
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[ 43%] Built target crystal09format
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[ 43%] Built target chemkinformat
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[ 43%] Built target jaguarformat
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[ 43%] Built target aoforceformat
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[ 44%] Built target pubchem
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[ 44%] Built target turbomoleformat
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[ 45%] Built target abinitformat
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[ 45%] Built target acesformat
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[ 45%] Built target alchemyformat
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[ 45%] Built target smilesformat
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[ 45%] Built target CSRformat
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[ 46%] Built target confabreport
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[ 47%] Built target pdbformat
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[ 48%] Built target painterformat
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[ 49%] Built target smileyformat
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[ 49%] Built target povrayformat
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[ 49%] Built target shelxformat
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[ 49%] Built target xsfformat
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[ 50%] Built target inchiformat
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[ 51%] Built target mdlformat
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[ 52%] Built target posformat
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[ 53%] Built target lmpdatformat
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[ 54%] Built target fastsearchformat
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[ 54%] Built target thermoformat
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[ 55%] Built target gulpformat
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[ 56%] Built target mmodformat
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[ 56%] Built target mol2format
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[ 56%] Built target MNAformat
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[ 56%] Built target png2format
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[ 56%] Built target balstformat
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[ 56%] Built target dmolformat
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[ 56%] Built target castepformat
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[ 56%] Built target gamessukformat
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[ 56%] Built target fpsformat
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[ 56%] Built target nulformat
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[ 57%] Built target gamessformat
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[ 58%] Built target unichemformat
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[ 58%] Built target molreport
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[ 58%] Built target stlformat
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[ 58%] Built target titleformat
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[ 58%] Built target mopacformat
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[ 59%] Built target nwchemformat
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[ 59%] Built target APIInterface
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[ 60%] Built target qchemformat
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[ 60%] Built target svgformat
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[ 60%] Built target fastaformat
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[ 61%] Built target fingerprintformat
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[ 62%] Built target siestaformat
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[ 62%] Built target reportformat
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[ 63%] Built target pngformat
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[ 63%] Built target vaspformat
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[ 63%] Built target pwscfformat
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[ 64%] Built target acrformat
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[ 65%] Built target zindoformat
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[ 65%] Built target moldenformat
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[ 65%] Built target orcaformat
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[ 65%] Built target PQSformat
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[ 66%] Built target MCDLformat
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[ 66%] Built target copyformat
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[ 66%] Built target freefracformat
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[ 67%] Built target amberformat
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Install the project...
-- Install configuration: "RelWithDebInfo"
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make: Leaving directory '/usr/src/RPM/BUILD/openbabel-2.4.1'
+ rm -f '/usr/src/tmp/openbabel-buildroot/usr/lib64/*.a'
+ rm -f '/usr/src/tmp/openbabel-buildroot/usr/lib64/openbabel/2.4.1/*.a' '/usr/src/tmp/openbabel-buildroot/usr/lib64/openbabel/2.4.1/*.la' '/usr/src/tmp/openbabel-buildroot/usr/lib64/openbabel/*.a' '/usr/src/tmp/openbabel-buildroot/usr/lib64/openbabel/*.la'
+ /usr/lib/rpm/brp-alt
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mode of './usr/lib64/libopenbabel.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--)
Verifying and fixing files in /usr/src/tmp/openbabel-buildroot (binconfig,pkgconfig,libtool,desktop)
Checking contents of files in /usr/src/tmp/openbabel-buildroot/ (default)
Compressing files in /usr/src/tmp/openbabel-buildroot (auto)
removed '/usr/src/tmp/openbabel-buildroot/usr/share/man/man1/obabel.1'
'/usr/src/tmp/openbabel-buildroot/usr/share/man/man1/obabel.1.xz' -> 'babel.1.xz'
removed '/usr/src/tmp/openbabel-buildroot/usr/share/man/man1/obabel.1.xz'
'/usr/src/tmp/openbabel-buildroot/usr/share/man/man1/obabel.1.xz' -> 'babel.1.xz'
Adjusting library links in /usr/src/tmp/openbabel-buildroot
./usr/lib64:
libopenbabel.so.5 -> libopenbabel.so.5.0.0
libinchi.so.0 -> libinchi.so.0.4.1
Verifying ELF objects in /usr/src/tmp/openbabel-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal)
Bytecompiling python modules in /usr/src/tmp/openbabel-buildroot using /usr/bin/python
compile /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py
compile /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py
Bytecompiling python modules with optimization in /usr/src/tmp/openbabel-buildroot using /usr/bin/python -O
compile /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py
compile /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py
Hardlinking identical .pyc and .pyo files
'./usr/lib64/python2.7/site-packages/pybel.pyo' => './usr/lib64/python2.7/site-packages/pybel.pyc'
'./usr/lib64/python2.7/site-packages/openbabel.pyo' => './usr/lib64/python2.7/site-packages/openbabel.pyc'
Processing files: openbabel-2.4.1-alt4
Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.75155
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd openbabel-2.4.1
+ DOCDIR=/usr/src/tmp/openbabel-buildroot/usr/share/doc/openbabel-2.4.1
+ export DOCDIR
+ rm -rf /usr/src/tmp/openbabel-buildroot/usr/share/doc/openbabel-2.4.1
+ /bin/mkdir -p /usr/src/tmp/openbabel-buildroot/usr/share/doc/openbabel-2.4.1
+ cp -prL AUTHORS README.md THANKS /usr/src/tmp/openbabel-buildroot/usr/share/doc/openbabel-2.4.1
+ chmod -R go-w /usr/src/tmp/openbabel-buildroot/usr/share/doc/openbabel-2.4.1
+ chmod -R a+rX /usr/src/tmp/openbabel-buildroot/usr/share/doc/openbabel-2.4.1
+ cp -prL doc/FAQ.html doc/README.dioxin.pov doc/README.povray doc/dioxin.inc doc/dioxin.mol2 doc/dioxin.png doc/dioxin.pov /usr/src/tmp/openbabel-buildroot/usr/share/doc/openbabel-2.4.1
+ chmod -R go-w /usr/src/tmp/openbabel-buildroot/usr/share/doc/openbabel-2.4.1
+ chmod -R a+rX /usr/src/tmp/openbabel-buildroot/usr/share/doc/openbabel-2.4.1
+ exit 0
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.sDuc6L
find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,shell,typelib)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.3m2kkW
find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib)
Requires: /lib64/ld-linux-x86-64.so.2, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libgcc_s.so.1(GCC_3.0)(64bit), libopenbabel.so.5()(64bit) >= set:piPkeuUAuwVbsIcZlTnorwQknvyDoWG353uPasEjGnb3tivcMQ6gtjaTtpwZeydZ5jcIxNwYEZac0KbVOExrdy1CtTZwlMhSMQ5HhZFmEYyf7jliu0LSgJVxLdbD8T3Ebt0U7JSUcEYIrozZDD5mhGF9DsZmip2uOYdzZ19OjMzFa8ReG3KYLWHW8n8J8xQY06bK8kHBQfxHM6JkA54R1tUhH6bucyjiZ8bhuSqzDsDEfpCKAZJlwZfG0dPaj506GalSVZogWuZfsUhkZ4ptTJEJZHxhijKo91ZzAevIZyYjWjytb3nqB62Y348lpzUfthwLUdUuf2Fr5, libstdc++.so.6(CXXABI_1.3)(64bit), libstdc++.so.6(CXXABI_1.3.8)(64bit), libstdc++.so.6(CXXABI_1.3.9)(64bit), libstdc++.so.6(GLIBCXX_3.4)(64bit), libstdc++.so.6(GLIBCXX_3.4.11)(64bit), libstdc++.so.6(GLIBCXX_3.4.15)(64bit), libstdc++.so.6(GLIBCXX_3.4.21)(64bit), libstdc++.so.6(GLIBCXX_3.4.9)(64bit), libwx_baseu-2.8.so.0()(64bit) >= set:pi4nLt9ZasXNouIGrHjR1uh7KYwXZkS5hGXpZ4fKiOypSHHv4ZwObCN571JgRZB5EDhithXfem5UIS83iWuvLyXj59P7t7sKq2qbOilds5eRh1k0GKww2dhCPspO3xQSFZLZuMqtZqpr2FwHComZeWJcXpR38kt127FshokbWfPbjMjWoA1Mj6BiNS9ZgZyYBhxtBg126NNf3pGmKErZDjLUmGk4E6VnzZkAAT8FmbTPnUqStCjGn5mXC1XUp6nF0vZqf9S76HRGTyUDRvznzBlZg7EXDhTr3TZ4VR9lShkVNke8H97PbDuVtoOqlXB7IaYGKs1PqeUE6wJZ31, libwx_baseu-2.8.so.0(WXU_2.8)(64bit), libwx_gtk2u_adv-2.8.so.0()(64bit) >= set:on2Dt0, libwx_gtk2u_adv-2.8.so.0(WXU_2.8)(64bit), libwx_gtk2u_core-2.8.so.0()(64bit) >= set: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, libwx_gtk2u_core-2.8.so.0(WXU_2.8)(64bit), libwx_gtk2u_core-2.8.so.0(WXU_2.8.5)(64bit), rtld(GNU_HASH), rtld(GNU_UNIQUE)
Requires(rpmlib): rpmlib(SetVersions)
Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.erVFCh
Creating openbabel-debuginfo package
Processing files: libopenbabel-2.4.1-alt4
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.XYYz9F
find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,shell,typelib)
lib.prov: /usr/src/tmp/openbabel-buildroot/usr/lib64/libinchi.so.0: 901 symbols, 20 bpp
warning: hash collision: RemoveLastGroupFromBnStruct x_close_line
lib.prov: /usr/src/tmp/openbabel-buildroot/usr/lib64/libopenbabel.so.5: 3043 symbols, 22 bpp
warning: hash collision: _ZN9OpenBabel8OBLocaleD1Ev _ZNSt6vectorIPN9OpenBabel6OBAtomESaIS2_EEaSERKS4_
warning: hash collision: _ZN9OpenBabel5OBMol8IsChiralEv _ZSt13__adjust_heapIN9__gnu_cxx17__normal_iteratorIPPN9OpenBabel6OBRingESt6vectorIS4_SaIS4_EEEElS4_NS0_5__ops15_Iter_comp_iterIPFbPKS3_SD_EEEEvT_T0_SI_T1_T2_
warning: hash collision: _ZN9OpenBabel14setUpDownBondsEiiRNS_15TSimpleMoleculeERSt6vectorIiSaIiEES5_S5_ _ZNSt6vectorIPN9OpenBabel11TSingleAtomESaIS2_EE17_M_default_appendEm
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.SSACQ7
find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib)
Provides: libinchi.so.0()(64bit) = set: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, libopenbabel.so.5()(64bit) = set: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
Requires: libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libcairo.so.2()(64bit) >= set:mhZ4b5NOIyQ8NQ17Dc0feE777Zjk0473rgDULVHEZmWwI1f0wjkZuwnrUfBk90v8XZc0, libdl.so.2(GLIBC_2.2.5)(64bit), libgcc_s.so.1(GCC_3.0)(64bit), libgcc_s.so.1(GCC_3.4)(64bit), libm.so.6(GLIBC_2.2.5)(64bit), libstdc++.so.6(CXXABI_1.3)(64bit), libstdc++.so.6(CXXABI_1.3.8)(64bit), libstdc++.so.6(CXXABI_1.3.9)(64bit), libstdc++.so.6(GLIBCXX_3.4)(64bit), libstdc++.so.6(GLIBCXX_3.4.11)(64bit), libstdc++.so.6(GLIBCXX_3.4.15)(64bit), libstdc++.so.6(GLIBCXX_3.4.20)(64bit), libstdc++.so.6(GLIBCXX_3.4.21)(64bit), libstdc++.so.6(GLIBCXX_3.4.5)(64bit), libstdc++.so.6(GLIBCXX_3.4.9)(64bit), libxml2.so.2()(64bit) >= set:oifKYClhgDOqsHvQHTqghpZjZhYHWvoUeQ1SsoPjAmxIBQqtrxV4Ci1ZmZ5pFWRwsE7VJfSzWZpquEjesOiuXp1iKnNCwPSRxzODZGTR2, libxml2.so.2(LIBXML2_2.4.30)(64bit), libxml2.so.2(LIBXML2_2.5.0)(64bit), libxml2.so.2(LIBXML2_2.6.0)(64bit), libxml2.so.2(LIBXML2_2.6.5)(64bit), libz.so.1()(64bit) >= set:kgb6dgbWdAhpAO8J790ZdMxZd4, rtld(GNU_HASH), rtld(GNU_UNIQUE)
Requires(rpmlib): rpmlib(SetVersions)
Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.LXAYrl
Creating libopenbabel-debuginfo package
Processing files: libopenbabel-devel-2.4.1-alt4
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.aTT0eC
find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,shell,typelib)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.h9zQcW
find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib)
/usr/src/tmp/openbabel-buildroot/usr/include/openbabel-2.0/openbabel/op.h:23:10: fatal error: string: No such file or directory
#include <string>
^~~~~~~~
compilation terminated.
cpp.req: /usr/src/tmp/openbabel-buildroot/usr/include/openbabel-2.0/openbabel/op.h: cpp failed, trying c++ mode
/usr/src/tmp/openbabel-buildroot/usr/include/openbabel-2.0/openbabel/xml.h:25:10: fatal error: libxml/xmlreader.h: No such file or directory
#include <libxml/xmlreader.h>
^~~~~~~~~~~~~~~~~~~~
compilation terminated.
cpp.req: WARNING: /usr/src/tmp/openbabel-buildroot/usr/include/openbabel-2.0/openbabel/xml.h: cpp failed
/usr/src/tmp/openbabel-buildroot/usr/include/openbabel-2.0/openbabel/inchiformat.h:25:10: fatal error: inchi_api.h: No such file or directory
#include "inchi_api.h"
^~~~~~~~~~~~~
compilation terminated.
cpp.req: WARNING: /usr/src/tmp/openbabel-buildroot/usr/include/openbabel-2.0/openbabel/inchiformat.h: cpp failed
/usr/src/tmp/openbabel-buildroot/usr/include/openbabel-2.0/openbabel/math/align.h:26:10: fatal error: Eigen/Core: No such file or directory
#include <Eigen/Core>
^~~~~~~~~~~~
compilation terminated.
cpp.req: WARNING: /usr/src/tmp/openbabel-buildroot/usr/include/openbabel-2.0/openbabel/math/align.h: cpp failed
Provides: pkgconfig(openbabel-2.0) = 2.4.1
Requires: libopenbabel = 2.4.1-alt4, /usr/lib64/libinchi.so.0, /usr/lib64/libopenbabel.so.5, /usr/lib64/pkgconfig
Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.GuQKvw
Processing files: python-module-openbabel-2.4.1-alt4
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.NiUL29
find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,shell,typelib)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.yf4GLQ
find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib)
python.req: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: skipping sys
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=4 IGNORE (for REQ=slight and deep=12) module=dl
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=6 IGNORE (for REQ=slight and deep=12) module=DLFCN
python.req: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: skipping sys
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=22 IGNORE (for REQ=slight and deep=8) module=new
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=25 IGNORE (for REQ=slight and deep=12) module=importlib
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=36 IGNORE (for REQ=slight and deep=12) module=os
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=37 IGNORE (for REQ=slight and deep=12) module=imp
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=42 IGNORE (for REQ=slight and deep=16) module=_openbabel
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=53 IGNORE (for REQ=slight and deep=8) module=_openbabel
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=61 IGNORE (for REQ=slight and deep=8) module=builtins
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/openbabel.py: line=63 IGNORE (for REQ=slight and deep=8) module=__builtin__
python.req: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: skipping sys
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=29 IGNORE (for REQ=slight and deep=8) module=org
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=30 IGNORE (for REQ=slight and deep=8) module=java
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=34 IGNORE (for REQ=slight and deep=8) module=javax
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=36 IGNORE (for REQ=slight and deep=8) module=System
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=37 IGNORE (for REQ=slight and deep=8) module=clr
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=41 IGNORE (for REQ=slight and deep=8) module=System
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=42 IGNORE (for REQ=slight and deep=8) module=System
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=43 IGNORE (for REQ=slight and deep=8) module=System
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=49 IGNORE (for REQ=slight and deep=8) module=OpenBabel
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=53 IGNORE (for REQ=slight and deep=8) module=openbabel
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=56 IGNORE (for REQ=slight and deep=12) module=Tkinter
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=57 IGNORE (for REQ=slight and deep=12) module=Image
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=58 IGNORE (for REQ=slight and deep=12) module=ImageTk
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=430 IGNORE (for REQ=slight and deep=15) module=imolecule
/usr/lib/rpm/python.req.py: /usr/src/tmp/openbabel-buildroot/usr/lib64/python2.7/site-packages/pybel.py: line=1057 IGNORE (for REQ=slight and deep=8) module=doctest
Provides: python2.7(_openbabel), python2.7(openbabel), python2.7(pybel)
Requires: libopenbabel = 2.4.1-alt4, /usr/lib64/python2.7/site-packages, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libgcc_s.so.1(GCC_3.0)(64bit), libgcc_s.so.1(GCC_3.4)(64bit), libm.so.6(GLIBC_2.2.5)(64bit), libopenbabel.so.5()(64bit) >= set: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, libpython2.7.so.1.0()(64bit) >= set:ohlglTJlmNhqAG834zqkWOVIt5hanis8lkQheWv7xJFOIAZiFtnLLYm1GzjsDrFPXBFTQFIG1zlphDCHPglAqyIMMZlZjPIMzsCvQDAtKQ7qcr8r6Ye2gm3OendY3B90KiT2dVMB421aX1gkZ7Zcso0GiYQPJsxtsUfYciwAeGM7J3RvII2qTfZeHrNqyZxhXCAW1usVE2snzzFCplS4ujOpnMBITME1, libstdc++.so.6(CXXABI_1.3)(64bit), libstdc++.so.6(CXXABI_1.3.8)(64bit), libstdc++.so.6(CXXABI_1.3.9)(64bit), libstdc++.so.6(GLIBCXX_3.4)(64bit), libstdc++.so.6(GLIBCXX_3.4.11)(64bit), libstdc++.so.6(GLIBCXX_3.4.15)(64bit), libstdc++.so.6(GLIBCXX_3.4.20)(64bit), libstdc++.so.6(GLIBCXX_3.4.21)(64bit), libstdc++.so.6(GLIBCXX_3.4.9)(64bit), python-modules, python2.7(json), python2.7(xml), rtld(GNU_HASH), rtld(GNU_UNIQUE)
Requires(rpmlib): rpmlib(SetVersions)
Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.TGkmzD
Creating python-module-openbabel-debuginfo package
Processing files: openbabel-debuginfo-2.4.1-alt4
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.yebaXt
find-provides: running scripts (debuginfo)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Dr8uMn
find-requires: running scripts (debuginfo)
Requires: openbabel = 2.4.1-alt4, /usr/lib/debug/lib64/ld-linux-x86-64.so.2.debug, debug64(libc.so.6), debug64(libgcc_s.so.1), debug64(libopenbabel.so.5), debug64(libstdc++.so.6), debug64(libwx_baseu-2.8.so.0), debug64(libwx_gtk2u_adv-2.8.so.0), debug64(libwx_gtk2u_core-2.8.so.0)
Processing files: libopenbabel-debuginfo-2.4.1-alt4
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.wi51kq
find-provides: running scripts (debuginfo)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.fCvozx
find-requires: running scripts (debuginfo)
Provides: debug64(libinchi.so.0), debug64(libopenbabel.so.5)
Requires: libopenbabel = 2.4.1-alt4, debug64(libc.so.6), debug64(libcairo.so.2), debug64(libdl.so.2), debug64(libgcc_s.so.1), debug64(libm.so.6), debug64(libstdc++.so.6), debug64(libxml2.so.2), debug64(libz.so.1)
Processing files: python-module-openbabel-debuginfo-2.4.1-alt4
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.OId0Bj
find-provides: running scripts (debuginfo)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.tAcmO8
find-requires: running scripts (debuginfo)
Requires: python-module-openbabel = 2.4.1-alt4, debug64(libc.so.6), debug64(libgcc_s.so.1), debug64(libm.so.6), debug64(libopenbabel.so.5), debug64(libpython2.7.so.1.0), debug64(libstdc++.so.6)
Adding to openbabel-debuginfo a strict dependency on openbabel
Adding to libopenbabel-devel a strict dependency on libopenbabel
Adding to python-module-openbabel a strict dependency on libopenbabel
Adding to libopenbabel-debuginfo a strict dependency on libopenbabel
Adding to python-module-openbabel-debuginfo a strict dependency on python-module-openbabel
Adding to openbabel a strict dependency on libopenbabel
Adding to openbabel-debuginfo a strict dependency on libopenbabel-debuginfo
Adding to python-module-openbabel-debuginfo a strict dependency on libopenbabel-debuginfo
Removing from openbabel-debuginfo 30 sources provided by libopenbabel-debuginfo
also prunning dir /usr/src/debug/openbabel-2.4.1/include/openbabel/math
also prunning dir /usr/src/debug/openbabel-2.4.1/include/openbabel/stereo
also prunning dir /usr/src/debug/openbabel-2.4.1/include/openbabel
also prunning dir /usr/src/debug/openbabel-2.4.1/include
Removing from python-module-openbabel-debuginfo 54 sources provided by libopenbabel-debuginfo
also prunning dir /usr/src/debug/openbabel-2.4.1/include/openbabel/math
Removing 1 extra deps from openbabel due to dependency on libopenbabel
Removing 2 extra deps from libopenbabel-devel due to dependency on libopenbabel
Removing 1 extra deps from python-module-openbabel due to dependency on libopenbabel
Removing 1 extra deps from openbabel-debuginfo due to dependency on libopenbabel-debuginfo
Removing 1 extra deps from python-module-openbabel-debuginfo due to dependency on libopenbabel-debuginfo
Removing 16 extra deps from openbabel due to repentancy on libopenbabel
Removing 19 extra deps from python-module-openbabel due to repentancy on libopenbabel
Removing 3 extra deps from openbabel-debuginfo due to repentancy on libopenbabel-debuginfo
Removing 4 extra deps from python-module-openbabel-debuginfo due to repentancy on libopenbabel-debuginfo
Wrote: /usr/src/RPM/RPMS/x86_64/openbabel-2.4.1-alt4.x86_64.rpm
Wrote: /usr/src/RPM/RPMS/x86_64/libopenbabel-2.4.1-alt4.x86_64.rpm
Wrote: /usr/src/RPM/RPMS/x86_64/libopenbabel-devel-2.4.1-alt4.x86_64.rpm
Wrote: /usr/src/RPM/RPMS/x86_64/python-module-openbabel-2.4.1-alt4.x86_64.rpm
Wrote: /usr/src/RPM/RPMS/x86_64/openbabel-debuginfo-2.4.1-alt4.x86_64.rpm
Wrote: /usr/src/RPM/RPMS/x86_64/libopenbabel-debuginfo-2.4.1-alt4.x86_64.rpm
Wrote: /usr/src/RPM/RPMS/x86_64/python-module-openbabel-debuginfo-2.4.1-alt4.x86_64.rpm
832.55user 85.22system 4:53.96elapsed 312%CPU (0avgtext+0avgdata 1370848maxresident)k
0inputs+0outputs (0major+32465708minor)pagefaults 0swaps
848.61user 89.73system 5:15.28elapsed 297%CPU (0avgtext+0avgdata 1370848maxresident)k
2352inputs+0outputs (0major+33007222minor)pagefaults 0swaps