<86>May 3 05:56:34 userdel[3665533]: delete user 'rooter' <86>May 3 05:56:34 userdel[3665533]: removed shadow group 'rooter' owned by 'rooter' <86>May 3 05:56:34 groupadd[3665547]: group added to /etc/group: name=rooter, GID=537 <86>May 3 05:56:34 groupadd[3665547]: group added to /etc/gshadow: name=rooter <86>May 3 05:56:34 groupadd[3665547]: new group: name=rooter, GID=537 <86>May 3 05:56:34 useradd[3665558]: new user: name=rooter, UID=537, GID=537, home=/root, shell=/bin/bash <86>May 3 05:56:34 userdel[3665569]: delete user 'builder' <86>May 3 05:56:34 userdel[3665569]: removed group 'builder' owned by 'builder' <86>May 3 05:56:34 userdel[3665569]: removed shadow group 'builder' owned by 'builder' <86>May 3 05:56:34 groupadd[3665579]: group added to /etc/group: name=builder, GID=538 <86>May 3 05:56:34 groupadd[3665579]: group added to /etc/gshadow: name=builder <86>May 3 05:56:34 groupadd[3665579]: new group: name=builder, GID=538 <86>May 3 05:56:34 useradd[3665586]: new user: name=builder, UID=538, GID=538, home=/usr/src, shell=/bin/bash <13>May 3 05:56:38 rpmi: libgdbm-1.8.3-alt10 1454943313 installed <13>May 3 05:56:38 rpmi: libexpat-2.2.4-alt1 1503305341 installed <13>May 3 05:56:38 rpmi: libp11-kit-0.23.15-alt1 sisyphus+226408.100.2.1 1554288187 installed <13>May 3 05:56:38 rpmi: libtasn1-4.14-alt1 p9+235792.100.2.1 1565425233 installed <13>May 3 05:56:38 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>May 3 05:56:38 rpmi: alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>May 3 05:56:38 rpmi: ca-certificates-2020.01.23-alt1 p9+245253.100.3.1 1580749631 installed <13>May 3 05:56:38 rpmi: ca-trust-0.1.2-alt1 p9+233349.100.1.1 1561655062 installed <13>May 3 05:56:38 rpmi: p11-kit-trust-0.23.15-alt1 sisyphus+226408.100.2.1 1554288187 installed <13>May 3 05:56:38 rpmi: libcrypto1.1-1.1.1g-alt1 p9+250580.100.5.1 1588175208 installed <13>May 3 05:56:38 rpmi: libssl1.1-1.1.1g-alt1 p9+250580.100.5.1 1588175208 installed <13>May 3 05:56:38 rpmi: python3-3.7.4-alt3 p9+249932.100.2.1 1587126956 installed <13>May 3 05:56:38 rpmi: libpython3-3.7.4-alt3 p9+249932.100.2.1 1587126956 installed <13>May 3 05:56:39 rpmi: python3-base-3.7.4-alt3 p9+249932.100.2.1 1587126956 installed <13>May 3 05:56:39 rpmi: tests-for-installed-python3-pkgs-0.1.13.1-alt2 1535450458 installed <13>May 3 05:56:39 rpmi: rpm-build-python3-0.1.13.1-alt2 1535450458 installed <13>May 3 05:56:45 rpmi: python3-module-pkg_resources-1:40.8.0-alt2 sisyphus+229158.200.2.1 1557735221 installed <13>May 3 05:56:45 rpmi: libopenblas-0.2.20-alt2 p9+229427.100.2.1 1558020504 installed <13>May 3 05:56:45 rpmi: libnumpy-py3-1:1.15.4-alt1 sisyphus+225625.25600.91.1 1555303051 installed <13>May 3 05:56:45 rpmi: python-module-sphinxcontrib-2.1.1-alt2.1.2 sisyphus+227529.1100.1.2 1555924423 installed <13>May 3 05:56:45 rpmi: libnumpy-1:1.15.4-alt1 sisyphus+225625.25600.91.1 1555303051 installed <13>May 3 05:56:45 rpmi: python3-module-nose-1:1.3.7-alt4.git20160316 sisyphus+229068.100.1.1 1557255939 installed <13>May 3 05:56:45 rpmi: python3-module-coverage-4.5.3-alt1 sisyphus+228287.200.4.1 1556524529 installed <13>May 3 05:56:45 rpmi: python3-module-six-1.12.0-alt1 sisyphus+219665.100.2.1 1548148570 installed <13>May 3 05:56:45 rpmi: python3-module-iniconfig-1.0.0-alt1 sisyphus+227494.1100.1.3 1555839106 installed <13>May 3 05:56:46 rpmi: python3-module-apipkg-1.5-alt1 sisyphus+227465.1100.1.2 1555756555 installed <13>May 3 05:56:46 rpmi: python3-module-py-1.8.0-alt2 sisyphus+228349.1400.4.1 1556631070 installed <13>May 3 05:56:46 rpmi: python3-module-pluggy-0.11.0-alt1 sisyphus+229116.100.1.1 1557316655 installed <13>May 3 05:56:46 rpmi: python3-module-more-itertools-7.0.0-alt3 sisyphus+226536.100.1.1 1554329928 installed <13>May 3 05:56:46 rpmi: python3-module-attrs-19.1.0-alt1 sisyphus+227473.2100.1.2 1555756986 installed <13>May 3 05:56:46 rpmi: python3-module-atomicwrites-1.3.0-alt1 sisyphus+227473.2000.1.3 1555763467 installed <13>May 3 05:56:46 rpmi: python3-module-pytest-3.10.1-alt5 sisyphus+228366.2000.2.3 1556707871 installed <13>May 3 05:56:46 rpmi: python-module-iniconfig-1.0.0-alt1 sisyphus+227494.1100.1.3 1555839106 installed <13>May 3 05:56:46 rpmi: python-module-apipkg-1.5-alt1 1531926894 installed <13>May 3 05:56:46 rpmi: python-module-imagesize-1.1.0-alt1 sisyphus+229015.100.2.1 1557233756 installed <13>May 3 05:56:46 rpmi: python-sphinx-objects.inv-1:2.3.8.20190514-alt1 p9+229421.100.1.1 1557927689 installed <13>May 3 05:56:46 rpmi: libxapian-1.4.5-alt3 sisyphus+222778.100.1.1 1551144769 installed <13>May 3 05:56:46 rpmi: python-module-google-0.4.2-alt2.1 sisyphus+228356.1500.3.1 1556633038 installed <13>May 3 05:56:46 rpmi: libsqlite3-3.29.0-alt1 p9+237498.100.1.1 1568303484 installed <13>May 3 05:56:46 rpmi: python-module-enum34-1.1.6-alt3 1527251693 installed <13>May 3 05:56:46 rpmi: libxblas-1.0.248-alt1.3 sisyphus+229150.100.1.1 1557388758 installed <13>May 3 05:56:46 rpmi: libquadmath0-8.4.1-alt0.p9.1 p9+247559.100.2.1 1585587756 installed <13>May 3 05:56:46 rpmi: libgfortran5-8.4.1-alt0.p9.1 p9+247559.100.2.1 1585587756 installed <13>May 3 05:56:46 rpmi: liblapack-1:3.8.0-alt3 sisyphus+221521.100.1.1 1550134909 installed <13>May 3 05:56:46 rpmi: python3-module-numpy-testing-1:1.15.4-alt1 sisyphus+225625.25600.91.1 1555303051 installed <13>May 3 05:56:47 rpmi: python3-module-numpy-1:1.15.4-alt1 sisyphus+225625.25600.91.1 1555303051 installed <13>May 3 05:56:47 rpmi: libgpg-error-1.36-alt1 sisyphus+225621.300.1.1 1553521088 installed <13>May 3 05:56:47 rpmi: libgcrypt20-1.8.5-alt3 p9+239665.100.7.1 1586364671 installed <13>May 3 05:56:47 rpmi: libxslt-1.1.33-alt1 sisyphus+226936.100.1.1 1554820927 installed <13>May 3 05:56:47 rpmi: python-modules-curses-2.7.16-alt1.M90P.1 p9+244933.100.1.1 1579867164 installed <13>May 3 05:56:47 rpmi: libtinfo-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686221 installed <13>May 3 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1556711628 installed <13>May 3 05:56:49 rpmi: python-module-typing-3.6.6-alt2 sisyphus+220108.100.1.1 1548749697 installed <13>May 3 05:56:49 rpmi: python-modules-sqlite3-2.7.16-alt1.M90P.1 p9+244933.100.1.1 1579867164 installed <13>May 3 05:56:50 rpmi: python-module-SQLAlchemy-1.2.15-alt1 sisyphus+225625.4500.91.1 1555285684 installed <13>May 3 05:56:50 rpmi: python-module-py-1.8.0-alt2 sisyphus+228349.1400.4.1 1556631070 installed <13>May 3 05:56:50 rpmi: python-module-funcsigs-1.0.2-alt2 sisyphus+228355.2600.2.1 1556560236 installed <13>May 3 05:56:50 rpmi: python-module-scandir-1.10.0-alt1 sisyphus+225192.100.1.2 1552968852 installed <13>May 3 05:56:50 rpmi: python-module-pathlib2-2.3.3-alt1 sisyphus+228364.300.4.1 1556886257 installed <13>May 3 05:56:50 rpmi: python-module-atomicwrites-1.3.0-alt1 sisyphus+227473.2000.1.3 1555763467 installed <13>May 3 05:56:50 rpmi: python-module-xapian-1.4.5-alt3 sisyphus+225625.23000.91.1 1555297606 installed <13>May 3 05:56:50 rpmi: python-module-alabaster-0.7.6-alt3 sisyphus+228351.700.4.1 1556637370 installed <13>May 3 05:56:50 rpmi: python-module-Pygments-2.2.0-alt2 1526455576 installed <13>May 3 05:56:50 rpmi: python-module-sphinxcontrib-websupport-1.0.1-alt5 p9+247680.340.15.1 1585331199 installed <13>May 3 05:56:50 rpmi: python-module-sphinx-1:1.6.5-alt7 p9+247680.400.15.1 1585331437 installed <13>May 3 05:56:50 rpmi: python-module-numpydoc-1:0.7.0-alt1 sisyphus+227506.500.1.2 1555852058 installed <13>May 3 05:56:50 rpmi: python-module-pluggy-0.11.0-alt1 sisyphus+229116.100.1.1 1557316655 installed <13>May 3 05:56:50 rpmi: python-module-pytest-3.10.1-alt5 sisyphus+228366.2000.2.3 1556707871 installed <13>May 3 05:56:50 rpmi: python-module-numpy-testing-1:1.15.4-alt1 sisyphus+225625.25600.91.1 1555303051 installed <13>May 3 05:56:50 rpmi: python-module-numpy-1:1.15.4-alt1 sisyphus+225625.25600.91.1 1555303051 installed <13>May 3 05:56:50 rpmi: libnsl2-devel-1.1.0-alt1_1 1511548748 installed <13>May 3 05:56:51 rpmi: python-dev-2.7.16-alt1.M90P.1 p9+244933.100.1.1 1579867164 installed <13>May 3 05:56:51 rpmi: python-module-setuptools-1:40.8.0-alt2 sisyphus+229158.200.2.1 1557735221 installed <13>May 3 05:56:51 rpmi: scons-3.0.1-alt1 1518686948 installed <13>May 3 05:56:51 rpmi: libnumpy-devel-1:1.15.4-alt1 sisyphus+225625.25600.91.1 1555303051 installed <13>May 3 05:56:51 rpmi: python-module-pylbfgs-0.2.0.12-alt1 sisyphus+225625.32640.91.1 1555314130 installed <13>May 3 05:56:51 rpmi: python-module-Cython-0.29.13-alt1 p9+235498.1200.4.1 1565036601 installed <13>May 3 05:56:51 rpmi: libnumpy-py3-devel-1:1.15.4-alt1 sisyphus+225625.25600.91.1 1555303051 installed <13>May 3 05:56:51 rpmi: python3-module-setuptools-1:40.8.0-alt2 sisyphus+229158.200.2.1 1557735221 installed <13>May 3 05:56:51 rpmi: python3-module-pylbfgs-0.2.0.12-alt1 sisyphus+225625.32640.91.1 1555314130 installed <13>May 3 05:56:52 rpmi: python3-module-Cython-0.29.13-alt1 p9+235498.1200.4.1 1565036601 installed Building target platforms: x86_64 Building for target x86_64 Wrote: /usr/src/in/nosrpm/python-module-pyhacrf-0.1.2-alt1.1.1.nosrc.rpm Installing python-module-pyhacrf-0.1.2-alt1.1.1.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.10836 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf python-module-pyhacrf-0.1.2 + echo 'Source #0 (python-module-pyhacrf-0.1.2.tar):' Source #0 (python-module-pyhacrf-0.1.2.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/python-module-pyhacrf-0.1.2.tar + cd python-module-pyhacrf-0.1.2 + /bin/chmod -c -Rf u+rwX,go-w . + cp -fR . ../python3 + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.60381 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python-module-pyhacrf-0.1.2 + cython pyhacrf/algorithms.pyx /usr/lib64/python2.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /usr/src/RPM/BUILD/python-module-pyhacrf-0.1.2/pyhacrf/algorithms.pyx tree = Parsing.p_module(s, pxd, full_module_name) + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export FFLAGS + /usr/bin/python setup.py build --debug running build running build_py creating build creating build/lib.linux-x86_64-2.7 creating build/lib.linux-x86_64-2.7/pyhacrf copying pyhacrf/state_machine.py -> build/lib.linux-x86_64-2.7/pyhacrf copying pyhacrf/pyhacrf.py -> build/lib.linux-x86_64-2.7/pyhacrf copying pyhacrf/feature_extraction.py -> build/lib.linux-x86_64-2.7/pyhacrf copying pyhacrf/__init__.py -> build/lib.linux-x86_64-2.7/pyhacrf running build_ext building 'pyhacrf.algorithms' extension C compiler: x86_64-alt-linux-gcc -pthread -DNDEBUG -pipe -frecord-gcc-switches -Wall -g -O3 -fwrapv -pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing -fPIC creating build/temp.linux-x86_64-2.7 creating build/temp.linux-x86_64-2.7/pyhacrf compile options: '-g -I/usr/include/numpy -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -c' x86_64-alt-linux-gcc: pyhacrf/algorithms.c In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1821, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from pyhacrf/algorithms.c:598: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ pyhacrf/algorithms.c: In function '__pyx_pw_7pyhacrf_10algorithms_5forward_max_predict': pyhacrf/algorithms.c:4387:28: warning: '__pyx_v_source_node_potential' may be used uninitialized in this function [-Wmaybe-uninitialized] __pyx_v_edge_potential = ((*((__pyx_t_5numpy_float64_t *) ( /* dim=2 */ ((char *) (((__pyx_t_5numpy_float64_t *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_x_dot_parameters.data + __pyx_t_33 * __pyx_v_x_dot_parameters.strides[0]) ) + __pyx_t_34 * __pyx_v_x_dot_parameters.strides[1]) )) + __pyx_t_35)) ))) + __pyx_v_source_node_potential); ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pyhacrf/algorithms.c:4096:28: note: '__pyx_v_source_node_potential' was declared here __pyx_t_5numpy_float64_t __pyx_v_source_node_potential; ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pyhacrf/algorithms.c: In function '__pyx_pw_7pyhacrf_10algorithms_3forward_predict': pyhacrf/algorithms.c:3829:28: warning: '__pyx_v_source_node_potential' may be used uninitialized in this function [-Wmaybe-uninitialized] __pyx_v_edge_potential = ((*((__pyx_t_5numpy_float64_t *) ( /* dim=2 */ ((char *) (((__pyx_t_5numpy_float64_t *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_x_dot_parameters.data + __pyx_t_33 * __pyx_v_x_dot_parameters.strides[0]) ) + __pyx_t_34 * __pyx_v_x_dot_parameters.strides[1]) )) + __pyx_t_35)) ))) + __pyx_v_source_node_potential); ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pyhacrf/algorithms.c:3541:28: note: '__pyx_v_source_node_potential' was declared here __pyx_t_5numpy_float64_t __pyx_v_source_node_potential; ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x86_64-alt-linux-gcc -pthread -shared -L/usr/lib64/nsl -lnsl -pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing -g build/temp.linux-x86_64-2.7/pyhacrf/algorithms.o -L/usr/lib64/python2.7/site-packages/numpy/core/lib -lnpymath -lm -lpython2.7 -o build/lib.linux-x86_64-2.7/pyhacrf/algorithms.so + pushd ../python3 ~/RPM/BUILD/python3 ~/RPM/BUILD/python-module-pyhacrf-0.1.2 + cython3 pyhacrf/algorithms.pyx /usr/lib64/python3/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /usr/src/RPM/BUILD/python3/pyhacrf/algorithms.pyx tree = Parsing.p_module(s, pxd, full_module_name) + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export FFLAGS + /usr/bin/python3 setup.py build --debug running build running build_py creating build creating build/lib.linux-x86_64-3.7 creating build/lib.linux-x86_64-3.7/pyhacrf copying pyhacrf/state_machine.py -> build/lib.linux-x86_64-3.7/pyhacrf copying pyhacrf/pyhacrf.py -> build/lib.linux-x86_64-3.7/pyhacrf copying pyhacrf/feature_extraction.py -> build/lib.linux-x86_64-3.7/pyhacrf copying pyhacrf/__init__.py -> build/lib.linux-x86_64-3.7/pyhacrf running build_ext building 'pyhacrf.algorithms' extension C compiler: x86_64-alt-linux-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -pipe -frecord-gcc-switches -Wall -g -O3 -pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing -fPIC creating build/temp.linux-x86_64-3.7 creating build/temp.linux-x86_64-3.7/pyhacrf compile options: '-g -I/usr/include/numpy-py3 -I/usr/lib64/python3/site-packages/numpy/core/include -I/usr/include/python3.7m -c' x86_64-alt-linux-gcc: pyhacrf/algorithms.c In file included from /usr/include/numpy/ndarraytypes.h:1821, from /usr/include/numpy/ndarrayobject.h:18, from /usr/include/numpy/arrayobject.h:4, from pyhacrf/algorithms.c:598: /usr/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^~~~~~~ pyhacrf/algorithms.c: In function ‘__pyx_f_7pyhacrf_10algorithms_forward_predict’: pyhacrf/algorithms.c:3685:31: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] __pyx_t_14 = ((__pyx_v_s0 != __pyx_v_old_s0) != 0); ^~ pyhacrf/algorithms.c: In function ‘__pyx_f_7pyhacrf_10algorithms_forward_max_predict’: pyhacrf/algorithms.c:4243:31: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] __pyx_t_14 = ((__pyx_v_s0 != __pyx_v_old_s0) != 0); ^~ pyhacrf/algorithms.c: In function ‘__pyx_pw_7pyhacrf_10algorithms_5forward_max_predict’: pyhacrf/algorithms.c:4387:28: warning: ‘__pyx_v_source_node_potential’ may be used uninitialized in this function [-Wmaybe-uninitialized] __pyx_v_edge_potential = ((*((__pyx_t_5numpy_float64_t *) ( /* dim=2 */ ((char *) (((__pyx_t_5numpy_float64_t *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_x_dot_parameters.data + __pyx_t_33 * __pyx_v_x_dot_parameters.strides[0]) ) + __pyx_t_34 * __pyx_v_x_dot_parameters.strides[1]) )) + __pyx_t_35)) ))) + __pyx_v_source_node_potential); ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pyhacrf/algorithms.c:4096:28: note: ‘__pyx_v_source_node_potential’ was declared here __pyx_t_5numpy_float64_t __pyx_v_source_node_potential; ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pyhacrf/algorithms.c: In function ‘__pyx_pw_7pyhacrf_10algorithms_3forward_predict’: pyhacrf/algorithms.c:3829:28: warning: ‘__pyx_v_source_node_potential’ may be used uninitialized in this function [-Wmaybe-uninitialized] __pyx_v_edge_potential = ((*((__pyx_t_5numpy_float64_t *) ( /* dim=2 */ ((char *) (((__pyx_t_5numpy_float64_t *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_x_dot_parameters.data + __pyx_t_33 * __pyx_v_x_dot_parameters.strides[0]) ) + __pyx_t_34 * __pyx_v_x_dot_parameters.strides[1]) )) + __pyx_t_35)) ))) + __pyx_v_source_node_potential); ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pyhacrf/algorithms.c:3541:28: note: ‘__pyx_v_source_node_potential’ was declared here __pyx_t_5numpy_float64_t __pyx_v_source_node_potential; ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x86_64-alt-linux-gcc -pthread -shared -pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing -g build/temp.linux-x86_64-3.7/pyhacrf/algorithms.o -L/usr/lib64/python3/site-packages/numpy/core/lib -L/usr/lib64 -lnpymath -lm -lpython3.7m -o build/lib.linux-x86_64-3.7/pyhacrf/algorithms.cpython-37m.so + popd ~/RPM/BUILD/python-module-pyhacrf-0.1.2 + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.18455 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/python-module-pyhacrf-buildroot + : + /bin/rm -rf -- /usr/src/tmp/python-module-pyhacrf-buildroot + cd python-module-pyhacrf-0.1.2 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export FFLAGS + /usr/bin/python setup.py install --skip-build --root=/usr/src/tmp/python-module-pyhacrf-buildroot --force running install running install_lib creating /usr/src/tmp/python-module-pyhacrf-buildroot creating /usr/src/tmp/python-module-pyhacrf-buildroot/usr creating /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64 creating /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7 creating /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages creating /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf copying build/lib.linux-x86_64-2.7/pyhacrf/algorithms.so -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf copying build/lib.linux-x86_64-2.7/pyhacrf/__init__.py -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf copying build/lib.linux-x86_64-2.7/pyhacrf/feature_extraction.py -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf copying build/lib.linux-x86_64-2.7/pyhacrf/pyhacrf.py -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf copying build/lib.linux-x86_64-2.7/pyhacrf/state_machine.py -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf byte-compiling /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/feature_extraction.py to feature_extraction.pyc byte-compiling /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.py to pyhacrf.pyc byte-compiling /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/state_machine.py to state_machine.pyc running install_egg_info running egg_info creating pyhacrf.egg-info writing requirements to pyhacrf.egg-info/requires.txt writing pyhacrf.egg-info/PKG-INFO writing top-level names to pyhacrf.egg-info/top_level.txt writing dependency_links to pyhacrf.egg-info/dependency_links.txt writing manifest file 'pyhacrf.egg-info/SOURCES.txt' reading manifest file 'pyhacrf.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyhacrf.egg-info/SOURCES.txt' Copying pyhacrf.egg-info to /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf-0.1.2-py2.7.egg-info running install_scripts + pushd ../python3 ~/RPM/BUILD/python3 ~/RPM/BUILD/python-module-pyhacrf-0.1.2 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -fno-strict-aliasing' + export FFLAGS + /usr/bin/python3 setup.py install --skip-build --root=/usr/src/tmp/python-module-pyhacrf-buildroot --force running install running install_lib creating /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3 creating /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages creating /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf copying build/lib.linux-x86_64-3.7/pyhacrf/algorithms.cpython-37m.so -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf copying build/lib.linux-x86_64-3.7/pyhacrf/__init__.py -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf copying build/lib.linux-x86_64-3.7/pyhacrf/feature_extraction.py -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf copying build/lib.linux-x86_64-3.7/pyhacrf/pyhacrf.py -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf copying build/lib.linux-x86_64-3.7/pyhacrf/state_machine.py -> /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf byte-compiling /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__init__.py to __init__.cpython-37.pyc byte-compiling /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/feature_extraction.py to feature_extraction.cpython-37.pyc byte-compiling /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/pyhacrf.py to pyhacrf.cpython-37.pyc byte-compiling /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/state_machine.py to state_machine.cpython-37.pyc running install_egg_info running egg_info creating pyhacrf.egg-info writing pyhacrf.egg-info/PKG-INFO writing dependency_links to pyhacrf.egg-info/dependency_links.txt writing requirements to pyhacrf.egg-info/requires.txt writing top-level names to pyhacrf.egg-info/top_level.txt writing manifest file 'pyhacrf.egg-info/SOURCES.txt' reading manifest file 'pyhacrf.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyhacrf.egg-info/SOURCES.txt' Copying pyhacrf.egg-info to /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf-0.1.2-py3.7.egg-info running install_scripts + popd ~/RPM/BUILD/python-module-pyhacrf-0.1.2 + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/python-module-pyhacrf-buildroot (auto) mode of './usr/lib64/python3/site-packages/pyhacrf/algorithms.cpython-37m.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/python2.7/site-packages/pyhacrf/algorithms.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/python-module-pyhacrf-buildroot (binconfig,pkgconfig,libtool,desktop) Checking contents of files in /usr/src/tmp/python-module-pyhacrf-buildroot/ (default) Compressing files in /usr/src/tmp/python-module-pyhacrf-buildroot (auto) Adjusting library links in /usr/src/tmp/python-module-pyhacrf-buildroot ./usr/lib64: Verifying ELF objects in /usr/src/tmp/python-module-pyhacrf-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Bytecompiling python modules in /usr/src/tmp/python-module-pyhacrf-buildroot using /usr/bin/python unlink /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/__init__.pyc unlink /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/feature_extraction.pyc unlink /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.pyc unlink /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/state_machine.pyc compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/__init__.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/feature_extraction.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/state_machine.py Bytecompiling python modules with optimization in /usr/src/tmp/python-module-pyhacrf-buildroot using /usr/bin/python -O compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/__init__.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/feature_extraction.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/state_machine.py Bytecompiling python3 modules in /usr/src/tmp/python-module-pyhacrf-buildroot using /usr/bin/python3 Can't list '/usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib/python3/site-packages' unlink /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__pycache__/__init__.cpython-37.pyc unlink /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__pycache__/feature_extraction.cpython-37.pyc unlink /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__pycache__/pyhacrf.cpython-37.pyc unlink /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__pycache__/state_machine.cpython-37.pyc compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__init__.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/feature_extraction.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/pyhacrf.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/state_machine.py Bytecompiling python3 modules with optimization in /usr/src/tmp/python-module-pyhacrf-buildroot using /usr/bin/python3 -O compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__init__.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/feature_extraction.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/pyhacrf.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/state_machine.py Can't list '/usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib/python3/site-packages' Bytecompiling python3 modules with optimization-2 in /usr/src/tmp/python-module-pyhacrf-buildroot using /usr/bin/python3 -OO compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__init__.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/feature_extraction.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/pyhacrf.py compile /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/state_machine.py Can't list '/usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib/python3/site-packages' Hardlinking identical .pyc and .opt-?.pyc files './usr/lib64/python3/site-packages/pyhacrf/__pycache__/state_machine.cpython-37.opt-1.pyc' => './usr/lib64/python3/site-packages/pyhacrf/__pycache__/state_machine.cpython-37.pyc' './usr/lib64/python3/site-packages/pyhacrf/__pycache__/pyhacrf.cpython-37.opt-1.pyc' => './usr/lib64/python3/site-packages/pyhacrf/__pycache__/pyhacrf.cpython-37.pyc' './usr/lib64/python3/site-packages/pyhacrf/__pycache__/feature_extraction.cpython-37.opt-1.pyc' => './usr/lib64/python3/site-packages/pyhacrf/__pycache__/feature_extraction.cpython-37.pyc' './usr/lib64/python3/site-packages/pyhacrf/__pycache__/__init__.cpython-37.opt-1.pyc' => './usr/lib64/python3/site-packages/pyhacrf/__pycache__/__init__.cpython-37.pyc' Hardlinking identical .pyc and .pyo files './usr/lib64/python2.7/site-packages/pyhacrf/state_machine.pyo' => './usr/lib64/python2.7/site-packages/pyhacrf/state_machine.pyc' './usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.pyo' => './usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.pyc' './usr/lib64/python2.7/site-packages/pyhacrf/feature_extraction.pyo' => './usr/lib64/python2.7/site-packages/pyhacrf/feature_extraction.pyc' './usr/lib64/python2.7/site-packages/pyhacrf/__init__.pyo' => './usr/lib64/python2.7/site-packages/pyhacrf/__init__.pyc' Executing(%check): /bin/sh -e /usr/src/tmp/rpm-tmp.43623 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python-module-pyhacrf-0.1.2 + python setup.py test -v running test running egg_info deleting pyhacrf.egg-info/requires.txt writing pyhacrf.egg-info/PKG-INFO writing top-level names to pyhacrf.egg-info/top_level.txt writing dependency_links to pyhacrf.egg-info/dependency_links.txt reading manifest file 'pyhacrf.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyhacrf.egg-info/SOURCES.txt' running build_ext copying build/lib.linux-x86_64-2.7/pyhacrf/algorithms.so -> pyhacrf test_default_state_machine (pyhacrf.tests.test_model.TestHacrf) ... ok test_fit_predict (pyhacrf.tests.test_model.TestHacrf) ... ok test_fit_predict_regularized (pyhacrf.tests.test_model.TestHacrf) ... ok test_fit_predict_regularized_viterbi (pyhacrf.tests.test_model.TestHacrf) ... ok test_initialize_parameters (pyhacrf.tests.test_model.TestHacrf) ... ok test_backward_connected (pyhacrf.tests.test_model.TestModel) ... ok test_build_lattice (pyhacrf.tests.test_model.TestModel) ... ok test_build_lattice_jumps (pyhacrf.tests.test_model.TestModel) ... ok test_derivate_chain (pyhacrf.tests.test_model.TestModel) ... ok test_derivate_large (pyhacrf.tests.test_model.TestModel) ... 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0.00000000e+00 0.00000000e+00 0.00000000e+00] [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [ 3.39559847e-02 1.36601557e+00 7.76253728e-02 3.03552042e+00 -1.23640075e+01 -3.30806870e+00 -7.46383193e+00 -7.18773663e+00 -3.15596026e+00 -9.66900188e+00] [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [-1.44136266e+00 2.28787530e+01 1.79371773e+01 3.46382876e+01 1.49554239e+01 -2.66880761e+00 2.04008757e+00 2.66375218e+01 5.24408961e+00 1.65856181e+01] [-2.11239740e+01 1.17161972e+01 -1.03475304e+01 -3.05647836e+01 -2.76463652e+01 -1.28684223e+01 -2.83795225e+01 1.42225872e+00 -4.83295798e+01 -2.85032638e+01]] [[ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [ 1.17038529e+01 4.52998335e+01 3.05008551e+01 6.31952508e+01 3.58641749e+01 1.91549088e+01 -5.68261731e-01 2.54284770e+01 2.11532926e+01 3.48230503e+01] [-2.37657392e+01 -4.19144724e+00 -1.72514991e+01 -3.08489590e+01 -4.64415617e+01 -2.88042641e+01 -3.92525870e+01 -4.18433679e+00 -5.64155120e+01 -4.46477329e+01] [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000eok test_derivate_medium (pyhacrf.tests.test_model.TestModel) ... ok test_forward_backward_same_partition_value (pyhacrf.tests.test_model.TestModel) ... ok test_forward_connected (pyhacrf.tests.test_model.TestModel) ... ok test_forward_single (pyhacrf.tests.test_model.TestModel) ... +00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [ 1.25882347e+01 6.01471688e+00 6.39708638e+00 1.84912891e+01 1.97224756e+01 1.27065603e+01 -1.32182310e+00 -3.25850700e-02 8.75323981e+00 1.23592991e+01] [-2.11873950e+00 -8.67295055e-01 -8.15001351e-01 6.74598017e+00 -5.24491340e+00 -3.51061762e+00 -4.69575631e+00 4.04688107e-01 2.22599173e+00 -5.97333617e-01] [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [-3.47611342e-82 -1.10853037e-81 -1.08933646e-81 1.28512139e-81 2.95525481e-81 -5.67275798e-82 1.68003607e-81 -4.45662000e-82 3.11314378e-81 1.65581388e-81] [ 3.39564365e-02 1.36601528e+00 7.76242750e-02 3.03552178e+00 -1.23640081e+01 -3.30806728e+00 -7.46383119e+00 -7.18773791e+00 -3.15595972e+00 -9.66900035e+00] [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [-1.44136303e+00 2.28787529e+01 1.79371774e+01 3.46382869e+01 1.49554232e+01 -2.66880685e+00 2.04008633e+00 2.66375197e+01 5.24408864e+00 1.65856168e+01] [-2.11239748e+01 1.17161962e+01 -1.03475307e+01 -3.05647862e+01 -2.76463642e+01 -1.28684239e+01 -2.83795245e+01 1.42225538e+00 -4.83295799e+01 -2.85032645e+01]] [[0 0 0 0 1 0 4] [0 0 0 1 0 0 6] [0 0 0 1 1 0 2] [0 0 1 0 1 1 5] [0 0 1 1 0 1 7] [0 0 1 1 1 1 3] [0 1 0 1 1 0 6] [0 1 1 1 1 1 7] [1 0 0 1 1 0 4] [1 0 1 1 1 1 5]] (0, 0, -9.875933550329254, -9.875933450334372) (0, 1, -9.875933550329254, -9.875933362259211) (1, 0, -9.875933550329254, -9.875933650391016) (1, 1, -9.875933550329254, -9.875933750071809) (2, 0, -9.875933550329254, -9.875933538409575) (2, 1, -9.875933550329254, -9.875933550329254) (3, 0, -9.875933550329254, -9.87593355057642) (3, 1, -9.875933550329254, -9.875933550329254) (4, 0, -9.875933550329254, -9.875933462254057) (4, 1, -9.875933550329254, -9.87593355032924) (5, 0, -9.875933550329254, -9.875933650110397) (5, 1, -9.875933550329254, -9.875933550362705) (6, 0, -9.875933550329254, -9.87593355032924) (6, 1, -9.875933550329254, -9.875933462254078) (7, 0, -9.875933550329254, -9.875933550362705) (7, 1, -9.875933550329254, -9.875933650043496) [[ 9.99948817e-01 1.88070043e+00] [-1.00061762e+00 -1.99742555e+00] [ 1.19196795e-01 0.00000000e+00] [-2.47165843e-03 0.00000000e+00] [ 8.80751969e-01 1.42108547e-07] [-9.97811433e-01 -3.34505756e-04] [ 1.42108547e-07 8.80751756e-01] [-3.34505756e-04 -9.97142422e-01]] [[ 9.99948801e-01 1.88070042e+00] [-1.00061761e+00 -1.99742554e+00] [ 1.19196784e-01 0.00000000e+00] [-2.47166897e-03 0.00000000e+00] [ 8.80751919e-01 9.91155487e-08] [-9.97811438e-01 -3.34504020e-04] [ 9.91155487e-08 8.80751720e-01] [-3.34504020e-04 -9.97142430e-01]] (-16.873071889836382, -9.87307188983638) (-6.997189737684216, -1.9971897376842156) [0 0 0 0 1 0 4] [0 0 0 1 0 0 6] [0 0 0 1 1 0 2] [0 0 1 0 1 1 5] [0 0 1 1 0 1 7] [0 0 1 1 1 1 3] [0 1 0 1 1 0 6] [0 1 1 1 1 1 7] [1 0 0 1 1 0 4] [1 0 1 1 1 1 5] ((0, 0, 0), -7.0, -7.0) ((0, 0, 0, 0, 1, 0, 4), -6.0, -6.0) ((0, 0, 0, 1, 0, 0, 6), -2.0, -2.0) ((0, 0, 0, 1, 1, 0, 2), -11.0, -11.0) ((0, 0, 1), -5.0, -5.0) ((0, 0, 1, 0, 1, 1, 5), 2.0, 2.0) ((0, 0, 1, 1, 0, 1, 7), 2.0, 2.0) ((0, 0, 1, 1, 1, 1, 3), -7.0, -7.0) ((0, 1, 0), -29.0, -29.0) ((0, 1, 0, 1, 1, 0, 6), -25.0, -25.0) ((0, 1, 1), -15.0, -15.0) ((0, 1, 1, 1, 1, 1, 7), -9.0, -9.0) ((1, 0, 0), -9.0, -9.0) ((1, 0, 0, 1, 1, 0, 4), -9.0, -9.0) ((1, 0, 1), -3.0, -3.0) ((1, 0, 1, 1, 1, 1, 5), -1.0000000000000002, -1.0) ((1, 1, 0), -16.87307188983638, -16.873071889836382) ((1, 1, 1), -6.997189737684216, -6.997189737684216) {(1, 1, 0): -14.0, (1, 2, 1): -18.0, (1, 0, 0): -8.0, (0, 0, 0, 1, 0, 0, 5): -2.0, (1, 0, 0, 1, 2, 2, 6): -3.0, (0, 0, 0, 1, 1, 0, 3): -7.0, (0, 0, 0): -6.0, (1, 2, 2): -6.0, (1, 1, 0, 1, 2, 1, 4): -13.0} ((0, 0, 0), -6.0, -6.0) ((0, 0, 0, 1, 0, 0, 5), -2.0, -2.0) ((0, 0, 0, 1, 1, 0, 3), -7.0, -7.0) ((1, 0, 0), -8.0, -8.0) ((1, 0, 0, 1, 2, 2, 6), ok test_transform_binary (pyhacrf.tests.test_features.TestStringPairFeatureExtractor) ... ok test_transform_transition (pyhacrf.tests.test_features.TestStringPairFeatureExtractor) ... ok ---------------------------------------------------------------------- Ran 16 tests in 8.098s OK -3.0, -3.0) ((1, 1, 0), -14.0, -14.0) ((1, 1, 0, 1, 2, 1, 4), -13.0, -13.0) ((1, 2, 1), -18.0, -18.0) ((1, 2, 2), -6.0, -6.0) 63 + python setup.py build_ext -i running build_ext copying build/lib.linux-x86_64-2.7/pyhacrf/algorithms.so -> pyhacrf + py.test -vv ============================= test session starts ============================== platform linux2 -- Python 2.7.16, pytest-3.10.1, py-1.8.0, pluggy-0.11.0 -- /usr/bin/python cachedir: .pytest_cache rootdir: /usr/src/RPM/BUILD/python-module-pyhacrf-0.1.2, inifile: collecting ... collected 16 items pyhacrf/tests/test_features.py::TestStringPairFeatureExtractor::test_transform_binary PASSED [ 6%] pyhacrf/tests/test_features.py::TestStringPairFeatureExtractor::test_transform_transition PASSED [ 12%] pyhacrf/tests/test_model.py::TestHacrf::test_default_state_machine PASSED [ 18%] pyhacrf/tests/test_model.py::TestHacrf::test_fit_predict PASSED [ 25%] pyhacrf/tests/test_model.py::TestHacrf::test_fit_predict_regularized PASSED [ 31%] pyhacrf/tests/test_model.py::TestHacrf::test_fit_predict_regularized_viterbi PASSED [ 37%] pyhacrf/tests/test_model.py::TestHacrf::test_initialize_parameters PASSED [ 43%] pyhacrf/tests/test_model.py::TestModel::test_backward_connected PASSED [ 50%] pyhacrf/tests/test_model.py::TestModel::test_build_lattice PASSED [ 56%] pyhacrf/tests/test_model.py::TestModel::test_build_lattice_jumps PASSED [ 62%] pyhacrf/tests/test_model.py::TestModel::test_derivate_chain PASSED [ 68%] pyhacrf/tests/test_model.py::TestModel::test_derivate_large PASSED [ 75%] pyhacrf/tests/test_model.py::TestModel::test_derivate_medium PASSED [ 81%] pyhacrf/tests/test_model.py::TestModel::test_forward_backward_same_partition_value PASSED [ 87%] pyhacrf/tests/test_model.py::TestModel::test_forward_connected PASSED [ 93%] pyhacrf/tests/test_model.py::TestModel::test_forward_single PASSED [100%] ========================== 16 passed in 11.88 seconds ========================== + pushd ../python3 ~/RPM/BUILD/python3 ~/RPM/BUILD/python-module-pyhacrf-0.1.2 + python3 setup.py test -v running test running egg_info writing pyhacrf.egg-info/PKG-INFO writing dependency_links to pyhacrf.egg-info/dependency_links.txt deleting pyhacrf.egg-info/requires.txt writing top-level names to pyhacrf.egg-info/top_level.txt reading manifest file 'pyhacrf.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pyhacrf.egg-info/SOURCES.txt' running build_ext copying build/lib.linux-x86_64-3.7/pyhacrf/algorithms.cpython-37m.so -> pyhacrf test_default_state_machine (pyhacrf.tests.test_model.TestHacrf) ... ok test_fit_predict (pyhacrf.tests.test_model.TestHacrf) ... ok test_fit_predict_regularized (pyhacrf.tests.test_model.TestHacrf) ... ok test_fit_predict_regularized_viterbi (pyhacrf.tests.test_model.TestHacrf) ... ok test_initialize_parameters (pyhacrf.tests.test_model.TestHacrf) ... ok test_backward_connected (pyhacrf.tests.test_model.TestModel) ... ok test_build_lattice (pyhacrf.tests.test_model.TestModel) ... ok test_build_lattice_jumps (pyhacrf.tests.test_model.TestModel) ... ok test_derivate_chain (pyhacrf.tests.test_model.TestModel) ... ok test_derivate_large (pyhacrf.tests.test_model.TestModel) ... [[ -10.76944681 144.03410276 0. ] [ 31.84368625 -106.41880703 0. ] [ -52.08917684 4.56943583 0. ] [ 31.01493741 -13.05932469 0. ] [ 49.77300715 -6.42566096 0. ] [ -28.69876771 24.47126975 0. ] [ -85.34522297 21.87369916 0. ] [ 106.4194624 6.18587665 0. ]] [[1.00000000e+000 3.51255382e-039] [1.00000000e+000 4.79741491e-039] [1.00000000e+000 2.82769900e-139] [1.00000000e+000 6.49602409e-012] [9.99933798e-001 6.62017180e-005] [8.78935301e-005 9.99912106e-001] [4.84545133e-009 9.99999995e-001] [1.25195260e-250 1.00000000e+000] [2.46675107e-010 1.00000000e+000] [1.03521403e-033 1.00000000e+000]] [[-0.0569188 0.07413339 0. ] [ 0.00187709 -0.06377866 0. ] [-0.01908823 0.00586189 0. ] [ 0.01721114 -0.00636556 0. ] [ 0.01578279 0.0078614 0. ] [-0.0139057 -0.00862948 0. ] [-0.00623241 0.02937325 0. ] [ 0.00810951 -0.01774676 0. ]] [[0.5227226 0.4772774 ] [0.52568993 0.47431007] [0.4547091 0.5452909 ] [0.51179222 0.48820778] [0.46347576 0.53652424] [0.45710098 0.54289902] [0.46159657 0.53840343] [0.42997978 0.57002022] [0.47419724 0.52580276] [0.50797852 0.49202148]] [[-0.0569188 0.07413339 0. ] [ 0.00187709 -0.06377866 0. ] [-0.01908823 0.00586189 0. ] [ 0.01721114 -0.00636556 0. ] [ 0.01578279 0.0078614 0. ] [-0.0139057 -0.00862948 0. ] [-0.00623241 0.02937325 0. ] [ 0.00810951 -0.01774676 0. ]] [[0.56394611 0.43605389] [0.52977205 0.47022795] [0.4751729 0.5248271 ] [0.51183761 0.48816239] [0.48608081 0.51391919] [0.4986367 0.5013633 ] [0.46947222 0.53052778] [0.43233544 0.56766456] [0.47463002 0.52536998] [0.51265109 0.48734891]] [0 0 0 0 1 0 1] [0 0 0 1 0 0 2] [0 1 0 1 1 0 2] [1 0 0 1 1 0 1] {(1, 1, 0): 0.0, (1, 0, 0, 1, 1, 0, 1): -3.0, (1, 0, 0): -4.0, (0, 1, 0, 1, 1, 0, 2): -3.0, (0, 1, 0): -2.0, (0, 0, 0, 1, 0, 0, 2): -6.0, (0, 0, 0): -3.999664593627104, (0, 0, 0, 0, 1, 0, 1): -10.0} (1, 1, 0) 0.0 0.0 (1, 0, 0, 1, 1, 0, 1) -3.0 -3.0 (1, 0, 0) -4.0 -4.0 (0, 1, 0, 1, 1, 0, 2) -3.0 -3.0 (0, 1, 0) -2.0 -2.0 (0, 0, 0, 1, 0, 0, 2) -6.0 -6.0 (0, 0, 0, 0, 1, 0, 1) -10.0 -10.0 (0, 0, 0) -3.9996645936271045 -3.999664593627104 [[0 0 0 0 1 0 4] [0 0 1 0 1 1 5]] 0 0 -14.000000831528373 -14.000000731528456 0 1 -14.000000831528373 -14.000000531528618 1 0 -14.000000831528373 -14.000000931528291 1 1 -14.000000831528373 -14.000001131528125 2 0 -14.000000831528373 -14.000000831528373 2 1 -14.000000831528373 -14.000000831528373 3 0 -14.000000831528373 -14.000000831528373 3 1 -14.000000831528373 -14.000000831528373 4 0 -14.000000831528373 -14.000000731528456 4 1 -14.000000831528373 -14.000000631528538 5 0 -14.000000831528373 -14.00000093152829 5 1 -14.000000831528373 -14.000001031528205 6 0 -14.000000831528373 -14.000000831528373 6 1 -14.000000831528373 -14.000000831528373 7 0 -14.000000831528373 -14.000000831528373 7 1 -14.000000831528373 -14.000000831528373 -14.000000831528373 -14.000000831528373 [[ 0.99999918 2.99999755] [-0.99999918 -2.99999751] [ 0. 0. ] [ 0. 0. ] [ 0.99999918 1.99999835] [-0.99999916 -1.99999832] [ 0. 0. ] [ 0. 0. ]] [[ 0.99999917 2.99999751] [-0.99999917 -2.99999751] [ 0. 0. ] [ 0. 0. ] [ 0.99999917 1.99999834] [-0.99999917 -1.99999834] [ 0. 0. ] [ 0. 0. ]] [[0 0 0 ... 1 0 6] [0 0 0 ... 0 0 9] [0 0 0 ... 1 0 3] ... [7 1 0 ... 2 0 6] [7 1 1 ... 2 1 7] [7 1 2 ... 2 2 8]] 0 0 -2464.803111871824 -2464.803111871824 0 1 -2464.803111871824 -2464.803111871824 0 2 -2464.803111871824 -2464.803111871824 0 3 -2464.803111871824 -2464.803111871824 0 4 -2464.803111871824 -2464.803111871824 0 5 -2464.803111871824 -2464.803111871824 0 6 -2464.803111871824 -2464.803111871824 0 7 -2464.803111871824 -2464.803111871824 0 8 -2464.803111871824 -2464.803111871824 0 9 -2464.803111871824 -2464.803111871824 1 0 -2464.803111871824 -2464.803108488232 1 1 -2464.803111871824 -2464.803106083671 1 2 -2464.803111871824 -2464.8031087493146 1 3 -2464.803111871824 -2464.8031083817596 1 4 -2464.803111871824 -2464.803106686622 1 5 -2464.803111871824 -2464.8031103513204 1 6 -2464.803111871824 -2464.8031078078893 1 7 -2464.803111871824 -2464.80311084399 1 8 -2464.803111871824 -2464.803112985161 1 9 -2464.803111871824 -2464.8031082345055 2 0 -2464.803111871824 -2464.803116392631 2 1 -2464.803111871824 -2464.8031169546484 2 2 -2464.803111871824 -2464.8031149512162 2 3 -2464.803111871824 -2464.8031142778527 2 4 -2464.803111871824 -2464.8031144341403 2 5 -2464.803111871824 -2464.803111425832 2 6 -2464.803111871824 -2464.803114248586 2 7 -2464.803111871824 -2464.8031137749117 2 8 -2464.803111871824 -2464.8031115965596 2 9 -2464.803111871824 -2464.8031137699077 3 0 -2464.803111871824 -2464.803111871824 3 1 -2464.803111871824 -2464.803111871824 3 2 -2464.803111871824 -2464.803111871824 3 3 -2464.803111871824 -2464.803111871824 3 4 -2464.803111871824 -2464.803111871824 3 5 -2464.803111871824 -2464.803111871824 3 6 -2464.803111871824 -2464.803111871824 3 7 -2464.803111871824 -2464.803111871824 3 8 -2464.803111871824 -2464.803111871824 3 9 -2464.803111871824 -2464.803111871824 4 0 -2464.803111871824 -2464.803111871824 4 1 -2464.803111871824 -2464.803111871824 4 2 -2464.803111871824 -2464.803111871824 4 3 -2464.803111871824 -2464.803111871824 4 4 -2464.803111871824 -2464.803111871824 4 5 -2464.803111871824 -2464.803111871824 4 6 -2464.803111871824 -2464.803111871824 4 7 -2464.803111871824 -2464.803111871824 4 8 -2464.803111871824 -2464.803111871824 4 9 -2464.803111871824 -2464.803111871824 5 0 -2464.803111871824 -2464.80311176675 5 1 -2464.803111871824 -2464.803112591848 5 2 -2464.803111871824 -2464.8031125576817 5 3 -2464.803111871824 -2464.8031121341483 5 4 -2464.803111871824 -2464.8031118958525 5 5 -2464.803111871824 -2464.8031119712273 5 6 -2464.803111871824 -2464.8031120378314 5 7 -2464.803111871824 -2464.8031123700107 5 8 -2464.803111871824 -2464.8031121481536 5 9 -2464.803111871824 -2464.803111919772 6 0 -2464.803111871824 -2464.803111871824 6 1 -2464.803111871824 -2464.803111871824 6 2 -2464.803111871824 -2464.803111871824 6 3 -2464.803111871824 -2464.803111871824 6 4 -2464.803111871824 -2464.803111871824 6 5 -2464.803111871824 -2464.803111871824 6 6 -2464.803111871824 -2464.803111871824 6 7 -2464.803111871824 -2464.803111871824 6 8 -2464.803111871824 -2464.803111871824 6 9 -2464.803111871824 -2464.803111871824 7 0 -2464.803111871824 -2464.803111427661 7 1 -2464.803111871824 -2464.803111683401 7 2 -2464.803111871824 -2464.8031117704477 7 3 -2464.803111871824 -2464.8031101895194 7 4 -2464.803111871824 -2464.803110037876 7 5 -2464.803111871824 -2464.8031111358223 7 6 -2464.803111871824 -2464.8031107998786 7 7 -2464.803111871824 -2464.8031103688118 7 8 -2464.803111871824 -2464.8031117572605 7 9 -2464.803111871824 -2464.803110636079 8 0 -2464.803111871824 -2464.8031127604067 8 1 -2464.803111871824 -2464.8031124616564 8 2 -2464.803111871824 -2464.8031124376976 8 3 -2464.803111871824 -2464.803111662399 8 4 -2464.803111871824 -2464.8031117581318 8 5 -2464.803111871824 -2464.80311153648 8 6 -2464.803111871824 -2464.8031127730637 8 7 -2464.803111871824 -2464.803112419515 8 8 -2464.803111871824 -2464.8031111986948 8 9 -2464.803111871824 -2464.8031124181825 9 0 -2464.803111871824 -2464.803111871824 9 1 -2464.803111871824 -2464.803111871824 9 2 -2464.803111871824 -2464.803111871824 9 3 -2464.803111871824 -2464.803111871824 9 4 -2464.803111871824 -2464.803111871824 9 5 -2464.803111871824 -2464.803111871824 9 6 -2464.803111871824 -2464.803111871824 9 7 -2464.803111871824 -2464.803111871824 9 8 -2464.803111871824 -2464.803111871824 9 9 -2464.803111871824 -2464.803111871824 10 0 -2464.803111871824 -2464.803108434103 10 1 -2464.803111871824 -2464.8031064433417 10 2 -2464.803111871824 -2464.8031090809172 10 3 -2464.803111871824 -2464.8031103383064 10 4 -2464.803111871824 -2464.803108789136 10 5 -2464.803111871824 -2464.803111549602 10 6 -2464.803111871824 -2464.8031095981532ok test_derivate_medium (pyhacrf.tests.test_model.TestModel) ... ok test_forward_backward_same_partition_value (pyhacrf.tests.test_model.TestModel) ... ok test_forward_connected (pyhacrf.tests.test_model.TestModel) ... ok test_forward_single (pyhacrf.tests.test_model.TestModel) ... ok test_transform_binary (pyhacrf.tests.test_features.TestStringPairFeatureExtractor) ... ok test_transform_transition (pyhacrf.tests.test_features.TestStringPairFeatureExtractor) ... ok ---------------------------------------------------------------------- Ran 16 tests in 11.097s OK 10 7 -2464.803111871824 -2464.8031118519384 10 8 -2464.803111871824 -2464.803112775699 10 9 -2464.803111871824 -2464.8031088883627 11 0 -2464.803111871824 -2464.8031161074136 11 1 -2464.803111871824 -2464.8031154735454 11 2 -2464.803111871824 -2464.8031134692574 11 3 -2464.803111871824 -2464.803113950711 11 4 -2464.803111871824 -2464.803114255238 11 5 -2464.803111871824 -2464.803111199493 11 6 -2464.803111871824 -2464.8031124630197 11 7 -2464.803111871824 -2464.803113224098 11 8 -2464.803111871824 -2464.803112317384 11 9 -2464.803111871824 -2464.8031137574885 [[ 0. 0. 0. 0. 0. 0. 0. 0. 0. 0. ] [ 33.8359223 57.88152976 31.22509497 34.90064501 51.85202099 15.20503702 40.63934739 10.2783406 -11.13337021 36.37318514] [-45.20807124 -50.82824373 -30.79392172 -24.06028671 -25.6231624 4.459921 -23.76762041 -19.0308765 2.75264483 -18.9808361 ] [ 0. 0. 0. 0. 0. 0. 0. 0. 0. 0. ] [ 0. 0. 0. 0. 0. 0. 0. 0. 0. 0. ] [ 1.05073923 -7.20023763 -6.85857685 -2.62324193 -0.24028395 -0.99403223 -1.66007339 -4.98186637 -2.76329502 -0.47948106] [ 0. 0. 0. 0. 0. 0. 0. 0. 0. 0. ] [ 4.44163106 1.88423201 1.01376372 16.82304628 18.33947863 7.36001766 10.71945462 15.030123 1.14563591 12.35745003] [ -8.8858269 -5.89832325 -5.65873506 2.09425252 1.13692295 3.35343884 -9.01239673 -5.47690888 6.73129307 -5.46358478] [ 0. 0. 0. 0. 0. 0. 0. 0. 0. 0. ] [ 34.37721261 54.28482382 27.90906819 15.33517661 30.82688181 3.22222149 22.73670816 0.19885647 -9.03874934 29.834614 ] [-42.35589586 -36.01721346 -15.97433311 -20.78887064 -23.83414085 6.72331225 -5.91195658 -13.52274012 -4.4556009 -18.8566446 ]] [[ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [ 3.38359231e+01 5.78815317e+01 3.12250979e+01 3.49006425e+01 5.18520205e+01 1.52050395e+01 4.06393523e+01 1.02783403e+01 -1.11333698e+01 3.63731852e+01] [-4.52080695e+01 -5.08282426e+01 -3.07939205e+01 -2.40602830e+01 -2.56231646e+01 4.45991832e+00 -2.37676197e+01 -1.90308762e+01 2.75264310e+00 -1.89808367e+01] [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [ 1.95188741e-63 -4.01042561e-63 6.91224782e-64 5.51794076e-64 1.15207719e-63 -2.05661634e-64 3.44200557e-63 -2.65762553e-64 1.86136526e-63 -1.79054400e-63] [ 1.05073634e+00 -7.20023621e+00 -6.85857680e+00 -2.62324352e+00 -2.40283489e-01 -9.94032668e-01 -1.66007418e+00 -4.98186717e+00 -2.76329620e+00 -4.79480958e-01] [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [ 4.44163072e+00 1.88423358e+00 1.01376473e+00 1.68230431e+01 1.83394793e+01 7.36001889e+00 1.07194552e+01 1.50301232e+01 1.14563566e+00 1.23574496e+01] [-8.88582662e+00 -5.89832068e+00 -5.65873799e+00 2.09425237e+00 1.13692285e+00 3.35344106e+00 -9.01239551e+00 -5.47690999e+00 6.73129066e+00 -5.46358313e+00] [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00] [ 3.43772109e+01 5.42848254e+01 2.79090638e+01 1.53351776e+01 3.08268794e+01 3.22222015e+00 2.27367028e+01 1.98858408e-01 -9.03875250e+00 2.98346097e+01] [-4.23558977e+01 -3.60172130e+01 -1.59743362e+01 -2.07888700e+01 -2.38341422e+01 6.72331042e+00 -5.91195570e+00 -1.35227403e+01 -4.45560432e+00 -1.88566467e+01]] [[0 0 0 0 1 0 4] [0 0 0 1 0 0 6] [0 0 0 1 1 0 2] [0 0 1 0 1 1 5] [0 0 1 1 0 1 7] [0 0 1 1 1 1 3] [0 1 0 1 1 0 6] [0 1 1 1 1 1 7] [1 0 0 1 1 0 4] [1 0 1 1 1 1 5]] 0 0 -9.875933550329254 -9.875933450334372 0 1 -9.875933550329254 -9.875933362259211 1 0 -9.875933550329254 -9.875933650391016 1 1 -9.875933550329254 -9.875933750071809 2 0 -9.875933550329254 -9.875933538409575 2 1 -9.875933550329254 -9.875933550329254 3 0 -9.875933550329254 -9.87593355057642 3 1 -9.875933550329254 -9.875933550329254 4 0 -9.875933550329254 -9.875933462254057 4 1 -9.875933550329254 -9.87593355032924 5 0 -9.875933550329254 -9.875933650110397 5 1 -9.875933550329254 -9.875933550362705 6 0 -9.875933550329254 -9.87593355032924 6 1 -9.875933550329254 -9.875933462254078 7 0 -9.875933550329254 -9.875933550362705 7 1 -9.875933550329254 -9.875933650043496 [[ 9.99948817e-01 1.88070043e+00] [-1.00061762e+00 -1.99742555e+00] [ 1.19196795e-01 0.00000000e+00] [-2.47165843e-03 0.00000000e+00] [ 8.80751969e-01 1.42108547e-07] [-9.97811433e-01 -3.34505756e-04] [ 1.42108547e-07 8.80751756e-01] [-3.34505756e-04 -9.97142422e-01]] [[ 9.99948801e-01 1.88070042e+00] [-1.00061761e+00 -1.99742554e+00] [ 1.19196784e-01 0.00000000e+00] [-2.47166897e-03 0.00000000e+00] [ 8.80751919e-01 9.91155487e-08] [-9.97811438e-01 -3.34504020e-04] [ 9.91155487e-08 8.80751720e-01] [-3.34504020e-04 -9.97142430e-01]] -16.873071889836382 -9.87307188983638 -6.997189737684216 -1.9971897376842156 [0 0 0 0 1 0 4] [0 0 0 1 0 0 6] [0 0 0 1 1 0 2] [0 0 1 0 1 1 5] [0 0 1 1 0 1 7] [0 0 1 1 1 1 3] [0 1 0 1 1 0 6] [0 1 1 1 1 1 7] [1 0 0 1 1 0 4] [1 0 1 1 1 1 5] (0, 0, 0) -7.0 -7.0 (0, 0, 0, 0, 1, 0, 4) -6.0 -6.0 (0, 0, 0, 1, 0, 0, 6) -2.0 -2.0 (0, 0, 0, 1, 1, 0, 2) -11.0 -11.0 (0, 0, 1) -5.0 -5.0 (0, 0, 1, 0, 1, 1, 5) 2.0 2.0 (0, 0, 1, 1, 0, 1, 7) 2.0 2.0 (0, 0, 1, 1, 1, 1, 3) -7.0 -7.0 (0, 1, 0) -29.0 -29.0 (0, 1, 0, 1, 1, 0, 6) -25.0 -25.0 (0, 1, 1) -15.0 -15.0 (0, 1, 1, 1, 1, 1, 7) -9.0 -9.0 (1, 0, 0) -9.0 -9.0 (1, 0, 0, 1, 1, 0, 4) -9.0 -9.0 (1, 0, 1) -3.0 -3.0 (1, 0, 1, 1, 1, 1, 5) -1.0000000000000002 -1.0 (1, 1, 0) -16.87307188983638 -16.873071889836382 (1, 1, 1) -6.997189737684216 -6.997189737684216 {(0, 0, 0): -6.0, (0, 0, 0, 1, 0, 0, 5): -2.0, (1, 0, 0): -8.0, (0, 0, 0, 1, 1, 0, 3): -7.0, (1, 1, 0): -14.0, (1, 0, 0, 1, 2, 2, 6): -3.0, (1, 2, 2): -6.0, (1, 1, 0, 1, 2, 1, 4): -13.0, (1, 2, 1): -18.0} (0, 0, 0) -6.0 -6.0 (0, 0, 0, 1, 0, 0, 5) -2.0 -2.0 (0, 0, 0, 1, 1, 0, 3) -7.0 -7.0 (1, 0, 0) -8.0 -8.0 (1, 0, 0, 1, 2, 2, 6) -3.0 -3.0 (1, 1, 0) -14.0 -14.0 (1, 1, 0, 1, 2, 1, 4) -13.0 -13.0 (1, 2, 1) -18.0 -18.0 (1, 2, 2) -6.0 -6.0 63 + python3 setup.py build_ext -i running build_ext copying build/lib.linux-x86_64-3.7/pyhacrf/algorithms.cpython-37m.so -> pyhacrf + py.test3 -vv ============================= test session starts ============================== platform linux -- Python 3.7.4, pytest-3.10.1, py-1.8.0, pluggy-0.11.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /usr/src/RPM/BUILD/python3, inifile: collecting ... collected 16 items pyhacrf/tests/test_features.py::TestStringPairFeatureExtractor::test_transform_binary PASSED [ 6%] pyhacrf/tests/test_features.py::TestStringPairFeatureExtractor::test_transform_transition PASSED [ 12%] pyhacrf/tests/test_model.py::TestHacrf::test_default_state_machine PASSED [ 18%] pyhacrf/tests/test_model.py::TestHacrf::test_fit_predict PASSED [ 25%] pyhacrf/tests/test_model.py::TestHacrf::test_fit_predict_regularized PASSED [ 31%] pyhacrf/tests/test_model.py::TestHacrf::test_fit_predict_regularized_viterbi PASSED [ 37%] pyhacrf/tests/test_model.py::TestHacrf::test_initialize_parameters PASSED [ 43%] pyhacrf/tests/test_model.py::TestModel::test_backward_connected PASSED [ 50%] pyhacrf/tests/test_model.py::TestModel::test_build_lattice PASSED [ 56%] pyhacrf/tests/test_model.py::TestModel::test_build_lattice_jumps PASSED [ 62%] pyhacrf/tests/test_model.py::TestModel::test_derivate_chain PASSED [ 68%] pyhacrf/tests/test_model.py::TestModel::test_derivate_large PASSED [ 75%] pyhacrf/tests/test_model.py::TestModel::test_derivate_medium PASSED [ 81%] pyhacrf/tests/test_model.py::TestModel::test_forward_backward_same_partition_value PASSED [ 87%] pyhacrf/tests/test_model.py::TestModel::test_forward_connected PASSED [ 93%] pyhacrf/tests/test_model.py::TestModel::test_forward_single PASSED [100%] ========================== 16 passed in 10.73 seconds ========================== + popd ~/RPM/BUILD/python-module-pyhacrf-0.1.2 + exit 0 Processing files: python-module-pyhacrf-0.1.2-alt1.1.1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.44289 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python-module-pyhacrf-0.1.2 + DOCDIR=/usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python-module-pyhacrf-0.1.2 + export DOCDIR + rm -rf /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python-module-pyhacrf-0.1.2 + /bin/mkdir -p /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python-module-pyhacrf-0.1.2 + cp -prL README.rst examples /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python-module-pyhacrf-0.1.2 + chmod -R go-w /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python-module-pyhacrf-0.1.2 + chmod -R a+rX /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python-module-pyhacrf-0.1.2 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.j5KjnY find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.uno3Zd find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks) /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/__init__.py: line=3 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/__init__.py: line=4 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.py: line=8 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.py: line=9 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.py: line=10 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python2.7/site-packages/pyhacrf/pyhacrf.py: line=11 possible relative import from ., UNIMPLEMENTED Provides: python2.7(pyhacrf), python2.7(pyhacrf.algorithms), python2.7(pyhacrf.feature_extraction), python2.7(pyhacrf.pyhacrf), python2.7(pyhacrf.state_machine) Requires: /usr/lib64/python2.7/site-packages, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libm.so.6(GLIBC_2.2.5)(64bit), libnpymath.so.0()(64bit) >= set:lkaiB1, libpython2.7.so.1.0()(64bit) >= set:og5gyOQjscn0CovPALN8noMPFkFZDOSXePdTGVwv4MONCJVh9vFN6Zty2u9WCewb3yoe1AQFAfnegO8oC8HB1VVHOcZubmwSp5SDz6p2wdYC7AKlwWUmV1bHsZj0lmZ3Iz0jlCi2EezDn8GH4Ppb2vV60kO2PKUzBXn9D5abs90vHf0ZA80KNYxCFs4ugM7IROt4wXepYJ3gDeWoKGRTA4KDPcbQB22Y2wuaXEqj1bQ0wjvg2NoZvwkHUfdTpi4qfI4T6EahDaApiBDIsh80FrgwEfSoQ4YjlVHrtwVuQe4R1G37VW2yC57EgYfwFTyV4CU1eTFAu3ZLNpzaMtdVNZkEOI2pO8fdL8d6Ev2i0pKdU3rui13z22SoJIuHR3a, python-modules, python2.7(lbfgs), python2.7(numpy), rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.I4wV7A Creating python-module-pyhacrf-debuginfo package Processing files: python3-module-pyhacrf-0.1.2-alt1.1.1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.66290 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python-module-pyhacrf-0.1.2 + DOCDIR=/usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python3-module-pyhacrf-0.1.2 + export DOCDIR + rm -rf /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python3-module-pyhacrf-0.1.2 + /bin/mkdir -p /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python3-module-pyhacrf-0.1.2 + cp -prL README.rst examples /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python3-module-pyhacrf-0.1.2 + chmod -R go-w /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python3-module-pyhacrf-0.1.2 + chmod -R a+rX /usr/src/tmp/python-module-pyhacrf-buildroot/usr/share/doc/python3-module-pyhacrf-0.1.2 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.J0BOj6 find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.56lxFF find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks) /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__init__.py: line=3 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/__init__.py: line=4 possible relative import from ., UNIMPLEMENTED python3.req: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/feature_extraction.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/pyhacrf.py: line=8 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/pyhacrf.py: line=9 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/pyhacrf.py: line=10 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-pyhacrf-buildroot/usr/lib64/python3/site-packages/pyhacrf/pyhacrf.py: line=11 possible relative import from ., UNIMPLEMENTED Provides: python3(pyhacrf), python3(pyhacrf.algorithms), python3(pyhacrf.feature_extraction), python3(pyhacrf.pyhacrf), python3(pyhacrf.state_machine) Requires: /usr/lib64/python3/site-packages, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libm.so.6(GLIBC_2.2.5)(64bit), libm.so.6(GLIBC_2.27)(64bit), libpython3.7m.so.1.0()(64bit) >= set:ogcAJjg3ysZ6BSkMVxjjkuYJfM8mUBTmd7Yz0meSIdfaVbdmy1t9WCewb3yoe1AQFAfnegO8oC8HB1Q0CYFNTScD0dO4uZj8NavHYwBl0jFXIbsDBA0GPUV5yWyNXZ5K10BIMIbZoBgGKSiMcVVDbm66lHcZmZuJB0YJu5ZgiBVNI7qCOhU1BmQxwSlY6Mt4tz05AVO26vbXYzVYS785kWiNrtCg7wIQTkM2d0UQ70X31FmNvqKPA8Quo9KJeHYn1IPNZz64avR62gW6PsMjxfSoQAzvgu5BLKR14MQndk7EesAHHxW1Gcnj2aJ1cZ6FQBw2cNzC9M6aBQrUZzezcwOzZ9grT45JTKszDuhqcg7BcT6tEN0sYA266dKo8GGROWJmfE, python3(collections) < 0, python3(functools) < 0, python3(lbfgs) < 0, python3(numpy) < 0, python3.7-ABI(64bit), rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.TRIoyp Creating python3-module-pyhacrf-debuginfo package Processing files: python-module-pyhacrf-debuginfo-0.1.2-alt1.1.1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.IjpNgf find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Grx3Ga find-requires: running scripts (debuginfo) Requires: python-module-pyhacrf = 0.1.2-alt1.1.1, debug64(libc.so.6), debug64(libm.so.6), debug64(libnpymath.so.0), debug64(libpython2.7.so.1.0) Processing files: python3-module-pyhacrf-debuginfo-0.1.2-alt1.1.1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.3P2gvc find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.SX0VSj find-requires: running scripts (debuginfo) Requires: python3-module-pyhacrf = 0.1.2-alt1.1.1, debug64(libc.so.6), debug64(libm.so.6), debug64(libpython3.7m.so.1.0) Adding to python-module-pyhacrf-debuginfo a strict dependency on python-module-pyhacrf Adding to python3-module-pyhacrf-debuginfo a strict dependency on python3-module-pyhacrf Wrote: /usr/src/RPM/RPMS/x86_64/python-module-pyhacrf-0.1.2-alt1.1.1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/python3-module-pyhacrf-0.1.2-alt1.1.1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/python-module-pyhacrf-debuginfo-0.1.2-alt1.1.1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/python3-module-pyhacrf-debuginfo-0.1.2-alt1.1.1.x86_64.rpm 103.04user 6.62system 2:18.41elapsed 79%CPU (0avgtext+0avgdata 390652maxresident)k 0inputs+0outputs (0major+1112783minor)pagefaults 0swaps 121.86user 14.66system 2:47.37elapsed 81%CPU (0avgtext+0avgdata 390652maxresident)k 208inputs+0outputs (0major+1626408minor)pagefaults 0swaps