<86>Apr 14 00:39:14 userdel[788]: delete user 'rooter' <86>Apr 14 00:39:14 userdel[788]: removed group 'rooter' owned by 'rooter' <86>Apr 14 00:39:14 groupadd[798]: group added to /etc/group: name=rooter, GID=585 <86>Apr 14 00:39:14 groupadd[798]: group added to /etc/gshadow: name=rooter <86>Apr 14 00:39:14 groupadd[798]: new group: name=rooter, GID=585 <86>Apr 14 00:39:14 useradd[812]: new user: name=rooter, UID=585, GID=585, home=/root, shell=/bin/bash <86>Apr 14 00:39:14 userdel[838]: delete user 'builder' <86>Apr 14 00:39:14 userdel[838]: removed group 'builder' owned by 'builder' <86>Apr 14 00:39:14 userdel[838]: removed shadow group 'builder' owned by 'builder' <86>Apr 14 00:39:14 groupadd[864]: group added to /etc/group: name=builder, GID=586 <86>Apr 14 00:39:14 groupadd[864]: group added to /etc/gshadow: name=builder <86>Apr 14 00:39:14 groupadd[864]: new group: name=builder, GID=586 <86>Apr 14 00:39:14 useradd[878]: new user: name=builder, UID=586, GID=586, home=/usr/src, shell=/bin/bash <13>Apr 14 00:39:17 rpmi: perl-Encode-2.83-alt1 1459157776 installed <13>Apr 14 00:39:17 rpmi: perl-HTTP-Date-6.02-alt1 1348645274 installed <13>Apr 14 00:39:17 rpmi: perl-LWP-MediaTypes-6.02-alt1 1329754558 installed <13>Apr 14 00:39:17 rpmi: perl-Compress-Raw-Zlib-2.069-alt1.1 1448470036 installed <13>Apr 14 00:39:17 rpmi: perl-libnet-1:3.08-alt1 1458419902 installed <13>Apr 14 00:39:17 rpmi: perl-URI-1.71-alt1 1455181348 installed <13>Apr 14 00:39:17 rpmi: perl-WWW-RobotRules-6.02-alt1 1329756211 installed <13>Apr 14 00:39:17 rpmi: perl-File-Listing-6.04-alt1 1329758996 installed <13>Apr 14 00:39:17 rpmi: perl-Encode-Locale-1.05-alt1 1444608613 installed <13>Apr 14 00:39:17 rpmi: perl-IO-HTML-1.001-alt1 1404821752 installed <13>Apr 14 00:39:17 rpmi: perl-IO-Socket-IP-0.37-alt1 1444921335 installed <13>Apr 14 00:39:17 rpmi: perl-Compress-Raw-Bzip2-2.069-alt1.1 1448470068 installed <13>Apr 14 00:39:17 rpmi: perl-IO-Compress-2.069-alt1 1444618007 installed <13>Apr 14 00:39:17 rpmi: perl-HTTP-Message-6.11-alt1 1444616672 installed <13>Apr 14 00:39:17 rpmi: perl-HTTP-Cookies-6.01-alt1 1329759964 installed <13>Apr 14 00:39:17 rpmi: perl-HTTP-Negotiate-6.01-alt1 1329760563 installed <13>Apr 14 00:39:17 rpmi: perl-Net-HTTP-6.09-alt1 1432310023 installed <13>Apr 14 00:39:17 rpmi: perl-HTML-Tagset-3.20-alt2 1317725093 installed <13>Apr 14 00:39:17 rpmi: perl-HTML-Parser-3.72-alt1 1455170565 installed <13>Apr 14 00:39:17 rpmi: perl-libwww-6.15-alt1 1449505512 installed <13>Apr 14 00:39:17 rpmi: libgdbm-1.8.3-alt10 1454943313 installed <13>Apr 14 00:39:17 rpmi: libexpat-2.2.4-alt0.M80P.1 1503871120 installed <13>Apr 14 00:39:17 rpmi: perl-CGI-4.28-alt1 1458414563 installed <13>Apr 14 00:39:17 rpmi: perl-DBM-1:5.22.3-alt0.M80P.1 1485958065 installed <13>Apr 14 00:39:17 rpmi: perl-XML-Parser-2.44-alt2 1456264144 installed <13>Apr 14 00:39:18 rpmi: perl-devel-1:5.22.3-alt0.M80P.1 1485958065 installed Installing perl-Boulder-1.30-alt2.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.6728 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf Boulder-1.30 + echo 'Source #0 (Boulder-1.30.tar.gz):' Source #0 (Boulder-1.30.tar.gz): + /bin/gzip -dc /usr/src/RPM/SOURCES/Boulder-1.30.tar.gz + /bin/tar -xf - + cd Boulder-1.30 + /bin/chmod -c -Rf u+rwX,go-w . + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.6728 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd Boulder-1.30 + rm Boulder/Labbase.pm + perl_vendor_build + export PERL_EXTUTILS_AUTOINSTALL=--skip + PERL_EXTUTILS_AUTOINSTALL=--skip + export XSUBPP_STATIC_XS=1 + XSUBPP_STATIC_XS=1 + _perl_vendor_fixin + find . -type f -print0 + xargs -r0 /usr/bin/subst -p '1s,^#![[:space:]]*\([^[:space:]]*/\)\?perl\([^/[:alpha:][:space:]][^/[:space:]]*\)\?\([[:space:]]\|$\),#!/usr/bin/perl\3,' + /bin/grep -qs -Ew '((dist|module)_name|Build_PL|Module::Build)' Build.PL + _perl_vendor_MM_build + : looking for PREREQ dependencies + /usr/bin/perl Makefile.PL PRINT_PREREQ=1 + tee .perl.req + : writing Makefile + /usr/bin/perl Makefile.PL PREFIX=/usr INSTALLDIRS=vendor Checking if your kit is complete... Warning: the following files are missing in your kit: Boulder/Labbase.pm Please inform the author. Generating a Unix-style Makefile Writing Makefile for Boulder + : running make + '[' -n '' ']' + NPROCS=8 + make -j8 'OPTIMIZE=-pipe -Wall -g -O2' 'CP=/bin/cp -p' make: Entering directory `/usr/src/RPM/BUILD/Boulder-1.30' cp Boulder/Blast/WU.pm blib/lib/Boulder/Blast/WU.pm cp Boulder/Blast/NCBI.pm blib/lib/Boulder/Blast/NCBI.pm cp Boulder/Genbank.pm blib/lib/Boulder/Genbank.pm cp Boulder/Stream.pm blib/lib/Boulder/Stream.pm cp Boulder/XML.pm blib/lib/Boulder/XML.pm cp Boulder/Omim.pm blib/lib/Boulder/Omim.pm cp Stone/Cursor.pm blib/lib/Stone/Cursor.pm cp Boulder/Store.pm blib/lib/Boulder/Store.pm cp Boulder/Blast.pm blib/lib/Boulder/Blast.pm cp Stone.pm blib/lib/Stone.pm cp Stone/GB_Sequence.pm blib/lib/Stone/GB_Sequence.pm cp Boulder/LocusLink.pm blib/lib/Boulder/LocusLink.pm cp Boulder.pod blib/lib/Boulder.pod cp Boulder/Medline.pm blib/lib/Boulder/Medline.pm cp Boulder/String.pm blib/lib/Boulder/String.pm cp Boulder/Swissprot.pm blib/lib/Boulder/Swissprot.pm cp Boulder/Unigene.pm blib/lib/Boulder/Unigene.pm make: Leaving directory `/usr/src/RPM/BUILD/Boulder-1.30' + : running tests + LD_BIND_NOW=1 + PERL_DL_NONLAZY=1 + /usr/bin/make test 'CP=/bin/cp -p' make: Entering directory `/usr/src/RPM/BUILD/Boulder-1.30' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/store.t ... ok t/stream.t .. ok All tests successful. Files=2, Tests=49, 0 wallclock secs ( 0.04 usr 0.01 sys + 0.08 cusr 0.01 csys = 0.14 CPU) Result: PASS make: Leaving directory `/usr/src/RPM/BUILD/Boulder-1.30' + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.3413 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/perl-Boulder-buildroot + : + /bin/rm -rf -- /usr/src/tmp/perl-Boulder-buildroot + cd Boulder-1.30 + perl_vendor_install + /bin/grep -qs -Ew Build_PL Build.PL + /bin/grep -qs -Ew '(dist|module)_name' Build.PL + _perl_vendor_MM_install + : installing + make 'INSTALL=/bin/install -p' 'CP=/bin/cp -p' DESTDIR=/usr/src/tmp/perl-Boulder-buildroot PREFIX=/usr INSTALLDIRS=vendor pure_install make: Entering directory `/usr/src/RPM/BUILD/Boulder-1.30' Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder.pod Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Stone.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Stone/GB_Sequence.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Stone/Cursor.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Unigene.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Swissprot.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/String.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Medline.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/LocusLink.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Blast.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Store.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Omim.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/XML.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Stream.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Genbank.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Blast/NCBI.pm Installing /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Blast/WU.pm make: Leaving directory `/usr/src/RPM/BUILD/Boulder-1.30' + _perl_vendor_check_buildroot + : prompting for files that contain /usr/local + find /usr/src/tmp/perl-Boulder-buildroot -type f -exec /bin/grep -FH /usr/local '{}' ';' /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Genbank.pm:use constant YANK => '/usr/local/bin/yank'; /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Genbank.pm: -fetch => '/usr/local/db/gbpri3.seq'); /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Genbank.pm: open (GB,"/usr/local/db/gbpri3.seq"); /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Genbank.pm:/usr/local/bin/yank. To support other locations, you may define the /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Genbank.pm: -fetch => '/usr/local/genbank/gbpri3.seq'); /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Swissprot.pm:use constant YANK => '/usr/local/bin/yank'; + : prompting for files that contain /tmp + find /usr/src/tmp/perl-Boulder-buildroot -type f -not -name .packlist -exec /bin/grep -FH /tmp '{}' ';' /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Genbank.pm: my $tmpfile = "/usr/tmp/yank$$"; /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Blast.pm: Blast_db= /usr/tmp/quickblast18202aaaa /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Blast.pm: Blast_db= /usr/tmp/quickblast18141aaaa /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Swissprot.pm: my($tmpfile) = "/usr/tmp/yank$$"; + _perl_vendor_save_prereq + /bin/grep -F 'perl(' .perl.req + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/perl-Boulder-buildroot (auto) removed './usr/lib64/perl5/auto/Boulder/.packlist' Verifying and fixing files in /usr/src/tmp/perl-Boulder-buildroot (binconfig,pkgconfig,libtool,desktop) Compressing files in /usr/src/tmp/perl-Boulder-buildroot (auto) Adjusting library links in /usr/src/tmp/perl-Boulder-buildroot ./usr/lib64: Verifying ELF objects in /usr/src/tmp/perl-Boulder-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Hardlinking identical .pyc and .pyo files Processing files: perl-Boulder-1.30-alt2 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.oEnTx5 find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.SlTR2W find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Blast.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Blast/NCBI.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Blast/WU.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Genbank.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/LocusLink.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Medline.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Omim.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Store.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Stream.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/String.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Swissprot.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/Unigene.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Boulder/XML.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Stone.pm syntax OK /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Stone/Cursor.pm syntax OK # perl(Bio/Seq.pm) at line 170 (depth 6) inside eval SKIP /usr/src/tmp/perl-Boulder-buildroot/usr/share/perl5/Stone/GB_Sequence.pm syntax OK Provides: perl(Boulder/Blast.pm) = 1.010, perl(Boulder/Blast/NCBI.pm) = 1.020, perl(Boulder/Blast/WU.pm) = 1.0, perl(Boulder/Genbank.pm) = 1.100, perl(Boulder/LocusLink.pm) = 1.0, perl(Boulder/Medline.pm) = 1.020, perl(Boulder/Omim.pm) = 1.010, perl(Boulder/Store.pm) = 1.200, perl(Boulder/Stream.pm) = 1.070, perl(Boulder/String.pm) = 1.010, perl(Boulder/Swissprot.pm) = 1.0, perl(Boulder/Unigene.pm) = 1.0, perl(Boulder/XML.pm), perl(Stone.pm) = 1.300, perl(Stone/Cursor.pm), perl(Stone/GB_Sequence.pm) Requires: /usr/share/perl5, perl(CGI.pm), perl(DB_File.pm), perl(Fcntl.pm), perl(File/Basename.pm), perl(IO/Socket.pm), perl(Symbol.pm), perl(XML/Parser.pm), perl(constant.pm), perl(overload.pm) Wrote: /usr/src/RPM/RPMS/noarch/perl-Boulder-1.30-alt2.noarch.rpm 2.86user 0.80system 0:04.62elapsed 79%CPU (0avgtext+0avgdata 15372maxresident)k 0inputs+0outputs (0major+130139minor)pagefaults 0swaps 7.10user 4.89system 0:12.51elapsed 95%CPU (0avgtext+0avgdata 121924maxresident)k 656inputs+0outputs (0major+336197minor)pagefaults 0swaps