<86>Apr 14 04:01:38 userdel[64398]: delete user 'rooter' <86>Apr 14 04:01:38 groupadd[64504]: group added to /etc/group: name=rooter, GID=645 <86>Apr 14 04:01:38 groupadd[64504]: new group: name=rooter, GID=645 <86>Apr 14 04:01:38 useradd[64551]: new user: name=rooter, UID=645, GID=645, home=/root, shell=/bin/bash <86>Apr 14 04:01:38 userdel[64631]: delete user 'builder' <86>Apr 14 04:01:38 userdel[64631]: removed group 'builder' owned by 'builder' <86>Apr 14 04:01:38 userdel[64631]: removed shadow group 'builder' owned by 'builder' <86>Apr 14 04:01:38 groupadd[64704]: group added to /etc/group: name=builder, GID=646 <86>Apr 14 04:01:38 groupadd[64704]: group added to /etc/gshadow: name=builder <86>Apr 14 04:01:38 groupadd[64704]: new group: name=builder, GID=646 <86>Apr 14 04:01:38 useradd[64734]: new user: name=builder, UID=646, GID=646, home=/usr/src, shell=/bin/bash <13>Apr 14 04:01:42 rpmi: xorg-xproto-devel-7.0.28-alt1 1448272470 installed <13>Apr 14 04:01:43 rpmi: libquadmath0-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 04:01:43 rpmi: libgomp1-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 04:01:43 rpmi: libfftw3-common-3.3.3-alt2 1384539828 installed <13>Apr 14 04:01:43 rpmi: libibverbs-1.1.8-alt1 1423045776 installed <13>Apr 14 04:01:43 rpmi: librdmacm-1.0.19.1-alt2 1423057437 installed <13>Apr 14 04:01:43 rpmi: libgfortran3-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 04:01:43 rpmi: libXau-1.0.8-alt1 1369565807 installed <13>Apr 14 04:01:43 rpmi: libICE-1.0.9-alt1 1409902719 installed <13>Apr 14 04:01:43 rpmi: libSM-1.2.2-alt1 1391072686 installed <13>Apr 14 04:01:43 rpmi: libdapl-1.2.16-alt2 1297310513 installed <13>Apr 14 04:01:43 rpmi: libopenblas-0.2.14-alt1.git20150324 1433158855 installed <13>Apr 14 04:01:43 rpmi: gcc-fortran-common-1.4.20-alt1 1432315196 installed <13>Apr 14 04:01:43 rpmi: libpng15-1.5.28-alt1 1484572014 installed <13>Apr 14 04:01:43 rpmi: libopenblas-devel-0.2.14-alt1.git20150324 1433158855 installed <13>Apr 14 04:01:43 rpmi: libICE-devel-1.0.9-alt1 1409902719 installed <13>Apr 14 04:01:43 rpmi: libSM-devel-1.2.2-alt1 1391072686 installed <13>Apr 14 04:01:43 rpmi: libXau-devel-1.0.8-alt1 1369565807 installed <13>Apr 14 04:01:43 rpmi: xorg-printproto-devel-1.0.5-alt1 1303466042 installed <13>Apr 14 04:01:43 rpmi: libfftw3-3.3.3-alt2 1384539885 installed <13>Apr 14 04:01:43 rpmi: libfftw3f-3.3.3-alt2 1384539885 installed <13>Apr 14 04:01:43 rpmi: libfftw3l-3.3.3-alt2 1384539885 installed <13>Apr 14 04:01:43 rpmi: libfftw3q-3.3.3-alt2 1384539885 installed <13>Apr 14 04:01:43 rpmi: libquadmath4.9-devel-4.9.2-alt5 1454577188 installed <13>Apr 14 04:01:43 rpmi: libgfortran4.9-devel-4.9.2-alt5 1454577188 installed <13>Apr 14 04:01:43 rpmi: libgfortran5-devel-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 04:01:43 rpmi: libquadmath4.7-devel-4.7.2-alt10 1454592962 installed <13>Apr 14 04:01:43 rpmi: tcsh-6.18.01-alt2 1442313244 installed <13>Apr 14 04:01:43 rpmi: rpm-macros-mpi-selector-1.0.3-alt3 1504498675 installed <13>Apr 14 04:01:43 rpmi: mpi-selector-1.0.3-alt3 1504498675 installed <13>Apr 14 04:01:43 rpmi: openmpi-1.6.4-alt2 1423058639 installed <13>Apr 14 04:01:44 rpmi: libxblas-1.0.248-alt1 1322010716 installed <13>Apr 14 04:01:44 rpmi: liblapack-1:3.5.0-alt1 1401382194 installed <13>Apr 14 04:01:44 rpmi: libjpeg-2:1.3.1-alt0.1 1388074033 installed <13>Apr 14 04:01:44 rpmi: libibumad-1.3.6-alt2 1297311908 installed <13>Apr 14 04:01:44 rpmi: libibcommon-1.2.0-alt2 1297310586 installed <13>Apr 14 04:01:44 rpmi: libibcommon-devel-1.2.0-alt2 1297310586 installed <13>Apr 14 04:01:44 rpmi: libibumad-devel-1.3.6-alt2 1297311908 installed <13>Apr 14 04:01:44 rpmi: libgsl-1.16-alt1.git20150121.1 1449191800 installed <13>Apr 14 04:01:44 rpmi: libsysfs-2.1.0-alt8 1435686567 installed <13>Apr 14 04:01:44 rpmi: libsysfs-devel-2.1.0-alt8 1435686567 installed <13>Apr 14 04:01:44 rpmi: libibverbs-devel-1.1.8-alt1 1423045776 installed <13>Apr 14 04:01:44 rpmi: librdmacm-devel-1.0.19.1-alt2 1423057437 installed <13>Apr 14 04:01:44 rpmi: libdapl-devel-1.2.16-alt2 1297310513 installed <13>Apr 14 04:01:44 rpmi: xorg-renderproto-devel-0.11.1-alt3 1303465056 installed <13>Apr 14 04:01:44 rpmi: libX11-locales-3:1.6.3-alt1 1431956885 installed <13>Apr 14 04:01:44 rpmi: xorg-kbproto-devel-1.0.6-alt1 1332531883 installed <13>Apr 14 04:01:44 rpmi: libXdmcp-1.1.1-alt1 1334617699 installed <13>Apr 14 04:01:44 rpmi: libxcb-1.12-alt2 p8.218219.300 1545313310 installed <13>Apr 14 04:01:44 rpmi: libX11-3:1.6.3-alt1 1431956911 installed <13>Apr 14 04:01:44 rpmi: libXext-1.3.3-alt1 1409902932 installed <13>Apr 14 04:01:44 rpmi: libXt-1.1.4-alt1 1369984716 installed <13>Apr 14 04:01:44 rpmi: libXrender-0.9.8-alt1 1371312110 installed <13>Apr 14 04:01:44 rpmi: libXmu-1.1.2-alt1 1391072528 installed <13>Apr 14 04:01:44 rpmi: libXp-1.0.2-alt1 1370421423 installed <13>Apr 14 04:01:46 rpmi: libxcb-devel-1.12-alt2 p8.218219.300 1545313310 installed <13>Apr 14 04:01:46 rpmi: libX11-devel-3:1.6.3-alt1 1431956911 installed <13>Apr 14 04:01:46 rpmi: libXrender-devel-0.9.8-alt1 1371312110 installed <13>Apr 14 04:01:46 rpmi: libXt-devel-1.1.4-alt1 1369984716 installed <13>Apr 14 04:01:46 rpmi: gcc-c++-common-1.4.20-alt1 1432315196 installed <13>Apr 14 04:01:47 rpmi: libstdc++5-devel-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 04:01:47 rpmi: gcc5-c++-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 04:01:47 rpmi: libasan1-4.9.2-alt5 1454577188 installed <13>Apr 14 04:01:47 rpmi: libcloog-isl4-0.18.3-alt1 1431520747 installed <13>Apr 14 04:01:48 rpmi: cpp4.9-4.9.2-alt5 1454577188 installed <13>Apr 14 04:01:49 rpmi: gcc4.9-4.9.2-alt5 1454577188 installed <13>Apr 14 04:01:49 rpmi: gcc4.9-fortran-4.9.2-alt5 1454577188 installed <13>Apr 14 04:01:49 rpmi: libgraphite2-1.3.10-alt0.M80P.1 1496411360 installed <13>Apr 14 04:01:49 rpmi: libexpat-2.2.4-alt0.M80P.1 1503871120 installed <13>Apr 14 04:01:49 rpmi: openmpi-devel-1.6.4-alt2 1423058639 installed <13>Apr 14 04:01:49 rpmi: libgsl-devel-1.16-alt1.git20150121.1 1449191800 installed <13>Apr 14 04:01:49 rpmi: liblapack-devel-1:3.5.0-alt1 1401382194 installed <13>Apr 14 04:01:49 rpmi: libfftw3-devel-3.3.3-alt2 1384539885 installed <13>Apr 14 04:01:50 rpmi: gcc5-fortran-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 04:01:50 rpmi: libtool_1.5-3:1.5.26-alt11 1450060029 installed <13>Apr 14 04:01:50 rpmi: xorg-cf-files-1.0.6-alt1 1453137637 installed <13>Apr 14 04:01:50 rpmi: imake-1.0.7-alt2 1401895768 installed <13>Apr 14 04:01:50 rpmi: chrpath-0.16-alt1 1453066315 installed <13>Apr 14 04:01:50 rpmi: libharfbuzz-1.6.3-alt0.M80P.1 1509918814 installed <13>Apr 14 04:01:50 rpmi: libfreetype-2.8-alt0.M80P.3 1505462817 installed <13>Apr 14 04:01:50 rpmi: fontconfig-2.12.6-alt1.M80P.1 1506008910 installed Updating fonts cache: <29>Apr 14 04:01:52 fontconfig: Updating fonts cache: succeeded [ DONE ] <13>Apr 14 04:01:52 rpmi: libXft-2.3.2-alt1 1409902650 installed <13>Apr 14 04:01:52 rpmi: libfreetype-devel-2.8-alt0.M80P.3 1505462817 installed <13>Apr 14 04:01:52 rpmi: fontconfig-devel-2.12.6-alt1.M80P.1 1506008910 installed <13>Apr 14 04:01:52 rpmi: libXft-devel-2.3.2-alt1 1409902650 installed <13>Apr 14 04:01:52 rpmi: libopenmotif4-2.3.3-alt4.1 1384239591 installed <13>Apr 14 04:01:52 rpmi: libopenmotif-devel-2.3.3-alt4.1 1384239591 installed Installing gromacs-4.0.7-alt8.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.5571 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf gromacs-4.0.7 + echo 'Source #0 (gromacs-4.0.7.tar.gz):' Source #0 (gromacs-4.0.7.tar.gz): + /bin/gzip -dc /usr/src/RPM/SOURCES/gromacs-4.0.7.tar.gz + /bin/tar -xf - + cd gromacs-4.0.7 + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #0 (gromacs-4.0.3-alt-LIBS-LDADD.patch):' Patch #0 (gromacs-4.0.3-alt-LIBS-LDADD.patch): + /usr/bin/patch -p0 patching file configure.ac patching file src/tools/Makefile.am + sed -i 's|lib/openmpi|lib64/openmpi|' configure.ac ++ find ./ -name Makefile.am + sed -i 's|^\(AM_CPPFLAGS.*\)|\1 -g|' ./src/tools/Makefile.am ./src/ngmx/Makefile.am ./src/mdlib/Makefile.am ./src/kernel/Makefile.am ./src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/Makefile.am ./src/gmxlib/nonbonded/nb_kernel_x86_64_sse/Makefile.am ./src/gmxlib/nonbonded/nb_kernel_ppc_altivec/Makefile.am ./src/gmxlib/nonbonded/nb_kernel_ia64_single/Makefile.am ./src/gmxlib/nonbonded/nb_kernel_ia64_double/Makefile.am ./src/gmxlib/nonbonded/nb_kernel_ia32_sse2/Makefile.am ./src/gmxlib/nonbonded/nb_kernel_ia32_sse/Makefile.am ./src/gmxlib/nonbonded/nb_kernel_ia32_3dnow/Makefile.am ./src/gmxlib/nonbonded/nb_kernel_bluegene/Makefile.am ./src/gmxlib/nonbonded/nb_kernel/Makefile.am ./src/gmxlib/nonbonded/Makefile.am ./src/gmxlib/gmx_lapack/Makefile.am ./src/gmxlib/gmx_blas/Makefile.am ./src/gmxlib/Makefile.am ./src/contrib/Makefile.am ./src/Makefile.am ./share/tutor/water/Makefile.am ./share/tutor/speptide/Makefile.am ./share/tutor/nmr2/Makefile.am ./share/tutor/nmr1/Makefile.am ./share/tutor/mixed/Makefile.am ./share/tutor/methanol/Makefile.am ./share/tutor/gmxdemo/Makefile.am ./share/tutor/Makefile.am ./share/top/Makefile.am ./share/template/Makefile.am ./share/html/online/Makefile.am ./share/html/images/Makefile.am ./share/html/Makefile.am ./share/Makefile.am ./scripts/Makefile.am ./man/man1/Makefile.am ./man/Makefile.am ./include/types/Makefile.am ./include/Makefile.am ./admin/Makefile.am ./Makefile.am + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.85806 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd gromacs-4.0.7 ++ mpi-selector --list ++ grep openmpi + mpi-selector --set openmpi + source /etc/profile.d/mpi-selector.sh ++ mpi_selector_dir=/var/lib/mpi-selector/data ++ mpi_selector_homefile=/usr/src/.mpi-selector ++ mpi_selector_sysfile=/etc/sysconfig/mpi-selector ++ mpi_selection= ++ test -f /usr/src/.mpi-selector +++ cat /usr/src/.mpi-selector ++ mpi_selection=openmpi ++ test openmpi '!=' '' -a -f /var/lib/mpi-selector/data/openmpi.sh ++ . /var/lib/mpi-selector/data/openmpi.sh +++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games +++ grep -q /usr/lib64/openmpi/bin +++ PATH=/usr/lib64/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games +++ export PATH +++ echo +++ grep -q /usr/lib64/openmpi/lib +++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++ export LD_LIBRARY_PATH +++ echo +++ grep -q /usr/lib64/openmpi/man +++ MANPATH=/usr/lib64/openmpi/man: +++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + sed -i 's|^runpath_var=LD_RUN_PATH|runpath_var=|g' acinclude.m4 + autoreconf -fisv autoreconf-default: Entering directory `.' autoreconf-default: configure.ac: not using Gettext autoreconf-default: running: aclocal --force configure.ac:419: warning: AC_CACHE_VAL(ac_o3, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_faltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_maltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_mabialtivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_fno_schedule_insns, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_7450, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_tune_970, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_powerpc, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_funroll_all_loops, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_cflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_fflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:507: ACX_CHECK_F77_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:455: warning: AC_CACHE_VAL(acx_float_format, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:164: ACX_FLOAT_FORMAT is expanded from... configure.ac:455: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level autoreconf-default: configure.ac: tracing configure.ac:419: warning: AC_CACHE_VAL(ac_o3, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_faltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_maltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_mabialtivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_fno_schedule_insns, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_7450, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_tune_970, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_powerpc, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_funroll_all_loops, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_cflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_fflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:507: ACX_CHECK_F77_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:455: warning: AC_CACHE_VAL(acx_float_format, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:164: ACX_FLOAT_FORMAT is expanded from... configure.ac:455: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level autoreconf-default: running: libtoolize --force You should update your `aclocal.m4' by running aclocal. Putting files in AC_CONFIG_AUX_DIR, `config'. autoreconf-default: configure.ac: not using Intltool autoreconf-default: configure.ac: not using gtk-doc configure.ac:419: warning: AC_CACHE_VAL(ac_o3, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_faltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_maltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_mabialtivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_fno_schedule_insns, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_7450, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_tune_970, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_powerpc, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_funroll_all_loops, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_cflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_fflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:507: ACX_CHECK_F77_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:455: warning: AC_CACHE_VAL(acx_float_format, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:164: ACX_FLOAT_FORMAT is expanded from... configure.ac:455: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level autoreconf-default: running: /usr/bin/autoconf-2.60 --force configure.ac:419: warning: AC_CACHE_VAL(ac_o3, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_faltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_maltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_mabialtivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_fno_schedule_insns, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_7450, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_tune_970, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_powerpc, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_funroll_all_loops, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_cflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_fflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:507: ACX_CHECK_F77_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:455: warning: AC_CACHE_VAL(acx_float_format, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:164: ACX_FLOAT_FORMAT is expanded from... configure.ac:455: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level autoreconf-default: running: /usr/bin/autoheader-2.60 --force configure.ac:419: warning: AC_CACHE_VAL(ac_o3, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_faltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_maltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_mabialtivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_fno_schedule_insns, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_7450, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_tune_970, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_powerpc, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_funroll_all_loops, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_cflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_fflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:507: ACX_CHECK_F77_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:455: warning: AC_CACHE_VAL(acx_float_format, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:164: ACX_FLOAT_FORMAT is expanded from... configure.ac:455: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level autoreconf-default: running: automake --add-missing --force-missing configure.ac:419: warning: AC_CACHE_VAL(ac_o3, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_faltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_maltivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_mabialtivec, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_fno_schedule_insns, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_7450, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_tune_970, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_m_cpu_powerpc, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_funroll_all_loops, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_cflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:481: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:419: warning: AC_CACHE_VAL(ac_guessed_fflags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:507: ACX_CHECK_F77_FLAGS is expanded from... acinclude.m4:633: ACX_COMPILER_MAXOPT is expanded from... configure.ac:419: the top level configure.ac:455: warning: AC_CACHE_VAL(acx_float_format, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:164: ACX_FLOAT_FORMAT is expanded from... configure.ac:455: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:3942: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3941: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4023: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:4022: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5190: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:5189: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1906: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2033: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2054: AC_CACHE_CHECK is expanded from... acinclude.m4:1951: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:6106: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:462: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... acinclude.m4:1580: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6633: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:5292: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5291: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:3078: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1371: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1351: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1316: AC_PROG_LIBTOOL is expanded from... configure.ac:462: the top level configure.ac:331: installing 'config/compile' configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:959: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/tools/Makefile.am:68: warning: 'LDFLAGS' is a user variable, you should not override it; src/tools/Makefile.am:68: use 'AM_LDFLAGS' instead autoreconf-default: Leaving directory `.' + mkdir single + pushd single ~/RPM/BUILD/gromacs-4.0.7/single ~/RPM/BUILD/gromacs-4.0.7 + buildThis float disable + ln -s ../configure . + CFLAGS='-pipe -Wall -g -O2' + export CFLAGS + CXXFLAGS='-pipe -Wall -g -O2' + export CXXFLAGS + FFLAGS='-pipe -Wall -g -O2' + export FFLAGS + '[' -n '' ']' ++ printf %s '-pipe -Wall -g -O2' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS= + export ASFLAGS + export lt_cv_prog_cc_static_works=no + lt_cv_prog_cc_static_works=no + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + ./configure --build=x86_64-alt-linux --host=x86_64-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --without-included-gettext --disable-rpath --enable-static=no --enable-shared --enable-float --enable-mpi --enable-prefetch-forces --enable-fortran --with-gnu-ld --with-fft=fftw3 --with-x --with-gsl --disable-mpi --program-suffix= --with-external-blas=-lopenblas configure: WARNING: unrecognized options: --without-included-gettext, --disable-rpath, --enable-prefetch-forces checking build system type... x86_64-alt-linux-gnu checking host system type... x86_64-alt-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '646' is supported by ustar format... yes checking whether GID '646' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking for x86_64-alt-linux-cc... no checking for x86_64-alt-linux-icc... no checking for x86_64-alt-linux-xlc... no checking for x86_64-alt-linux-gcc... x86_64-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-alt-linux-gcc accepts -g... yes checking for x86_64-alt-linux-gcc option to accept ISO C89... none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of x86_64-alt-linux-gcc... none checking for x86_64-alt-linux-f77... no checking for x86_64-alt-linux-ifort... no checking for x86_64-alt-linux-xlf... no checking for x86_64-alt-linux-xlf77... no checking for x86_64-alt-linux-cf77... no checking for x86_64-alt-linux-fl32... no checking for x86_64-alt-linux-g77... no checking for x86_64-alt-linux-fort77... no checking for x86_64-alt-linux-f90... no checking for x86_64-alt-linux-xlf90... no checking for x86_64-alt-linux-pgf77... no checking for x86_64-alt-linux-cf77... no checking for x86_64-alt-linux-fort... no checking for x86_64-alt-linux-fort77... no checking for x86_64-alt-linux-pgf90... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking dependency style of x86_64-alt-linux-gcc... none checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking how to run the C preprocessor... x86_64-alt-linux-gcc -E checking whether x86_64-alt-linux-gcc accepts -O3... yes checking whether x86_64-alt-linux-gcc accepts -funroll-all-loops... yes ****************************************** * Using CFLAGS from environment variable * ****************************************** ****************************************** * Using FFLAGS from environment variable * ****************************************** checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking size of int... 4 checking size of long int... 8 checking size of long long int... 8 checking size of off_t... 8 checking that size_t can hold pointers... yes checking floating-point format... IEEE754 (little-endian byte and word order) checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for a sed that does not truncate output... /bin/sed checking for ld used by x86_64-alt-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for /usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking how to recognise dependent libraries... (cached) pass_all checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking for x86_64-alt-linux-g++... x86_64-alt-linux-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-alt-linux-g++ accepts -g... yes checking dependency style of x86_64-alt-linux-g++... none checking how to run the C++ preprocessor... x86_64-alt-linux-g++ -E checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from x86_64-alt-linux-gcc object... ok checking for objdir... .libs checking for x86_64-alt-linux-ar... no checking for ar... ar checking for x86_64-alt-linux-ranlib... no checking for ranlib... ranlib checking for x86_64-alt-linux-strip... no checking for strip... strip checking if x86_64-alt-linux-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-alt-linux-gcc option to produce PIC... -fPIC checking if x86_64-alt-linux-gcc PIC flag -fPIC works... yes checking if x86_64-alt-linux-gcc static flag -static works... no checking if x86_64-alt-linux-gcc supports -c -o file.o... yes checking whether the x86_64-alt-linux-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by x86_64-alt-linux-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-alt-linux-g++ option to produce PIC... -fPIC checking if x86_64-alt-linux-g++ PIC flag -fPIC works... yes checking if x86_64-alt-linux-g++ static flag -static works... no checking if x86_64-alt-linux-g++ supports -c -o file.o... yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... no checking if f77 supports -c -o file.o... yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for sqrt in -lm... yes checking for fftw3.h... yes checking for main in -lfftw3f... yes checking rpc/rpc.h usability... yes checking rpc/rpc.h presence... yes checking for rpc/rpc.h... yes checking for rpc/xdr.h... yes checking for xdr_float in -lnsl... yes checking for working memcmp... yes checking return type of signal handlers... void checking for off_t... yes checking for vprintf... yes checking for _doprnt... no checking if malloc debugging is wanted... no checking for strcasecmp... yes checking for strdup... yes checking for bool... no checking size of int... (cached) 4 checking size of long int... (cached) 8 checking size of long long int... (cached) 8 checking size of off_t... (cached) 8 checking size of void*... 8 checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking gsl/gsl_version.h usability... yes checking gsl/gsl_version.h presence... yes checking for gsl/gsl_version.h... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking libxml/parser.h usability... no checking libxml/parser.h presence... no checking for libxml/parser.h... no checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for inline... inline checking whether your compiler can handle assembly files (*.s)... yes checking whether as fully supports X86_64 SSE instructions... yes checking whether byte ordering is bigendian... (cached) no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/gmxlib/Makefile config.status: creating src/gmxlib/gmx_blas/Makefile config.status: creating src/gmxlib/gmx_lapack/Makefile config.status: creating src/gmxlib/nonbonded/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_3dnow/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse2/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ppc_altivec/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_single/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_double/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_bluegene/Makefile config.status: creating include/Makefile config.status: creating include/types/Makefile config.status: creating src/mdlib/Makefile config.status: creating src/kernel/Makefile config.status: creating src/tools/Makefile config.status: creating src/ngmx/Makefile config.status: creating src/contrib/Makefile config.status: creating scripts/Makefile config.status: creating admin/Makefile config.status: creating share/Makefile config.status: creating share/tutor/Makefile config.status: creating share/tutor/gmxdemo/Makefile config.status: creating share/tutor/nmr1/Makefile config.status: creating share/tutor/nmr2/Makefile config.status: creating share/tutor/water/Makefile config.status: creating share/tutor/mixed/Makefile config.status: creating share/tutor/methanol/Makefile config.status: creating share/tutor/speptide/Makefile config.status: creating share/template/Makefile config.status: creating share/top/Makefile config.status: creating share/html/Makefile config.status: creating share/html/images/Makefile config.status: creating share/html/online/Makefile config.status: creating man/Makefile config.status: creating man/man1/Makefile config.status: creating src/config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --without-included-gettext, --disable-rpath, --enable-prefetch-forces + sed -i 's|^hardcode_libdir_flag_spec=.*|hardcode_libdir_flag_spec=""|g' libtool + sed -i 's|^runpath_var=LD_RUN_PATH|runpath_var=DIE_RPATH_DIE|g' libtool + '[' -n '' ']' + NPROCS=8 + make -j8 make: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' Making all in include make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' Making all in . make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' Making all in types make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include/types' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include/types' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' Making all in src make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' make all-recursive make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' Making all in gmxlib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' Making all in nonbonded make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' Making all in nb_kernel_x86_64_sse make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel010_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel010_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel030_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel030_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel100_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel100_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel101_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel101_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel102_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel102_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel103_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel103_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel104_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel104_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel110_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel110_x86_64_sse.s mkdir .libs x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel030_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel030_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel102_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel102_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel010_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel010_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel111_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel111_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel112_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel112_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel113_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel113_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel100_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel100_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel101_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel101_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel104_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel104_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel103_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel103_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel114_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel114_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel110_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel110_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel130_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel130_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel131_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel131_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel132_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel132_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel133_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel133_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel112_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel112_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel111_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel111_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel134_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel134_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel114_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel114_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel130_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel130_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel113_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel113_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel131_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel131_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel200_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel200_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel201_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel201_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel202_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel202_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel203_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel203_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel132_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel132_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel204_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel204_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel133_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel133_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel210_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel210_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel211_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel211_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel201_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel201_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel200_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel200_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel202_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel202_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel134_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel134_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel204_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel204_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel212_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel212_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel213_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel213_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel214_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel214_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel230_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel230_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel231_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel231_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel210_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel210_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel203_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel203_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel232_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel232_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel233_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel233_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel211_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel211_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel234_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel234_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel213_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel213_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel214_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel214_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel230_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel230_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel212_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel212_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel300_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel300_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel301_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel301_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel302_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel302_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel234_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel234_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel233_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel233_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel231_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel231_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel232_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel232_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel303_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel303_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel304_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel304_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel310_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel310_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel311_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel311_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel312_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel312_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel300_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel300_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel302_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel302_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel313_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel313_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel304_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel304_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel314_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel314_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel311_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel311_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel310_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel310_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel303_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel303_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel301_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel301_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel330_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel330_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel331_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel331_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel332_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel332_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel333_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel333_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel312_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel312_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel334_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel334_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel313_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel313_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel400_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel314_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel314_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel410_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel410_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel430_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel430_x86_64_sse.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel330_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel330_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel331_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel331_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel333_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel333_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_x86_64_sse_test_asm.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel_x86_64_sse_test_asm.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel332_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel332_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel334_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel334_x86_64_sse.o /bin/sh ../../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel_x86_64_sse.c x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel400_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel430_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel430_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel410_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel410_x86_64_sse.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel_x86_64_sse_test_asm.s -fPIC -DPIC -o .libs/nb_kernel_x86_64_sse_test_asm.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel_x86_64_sse.c -fPIC -DPIC -o .libs/nb_kernel_x86_64_sse.o /bin/sh ../../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnb_kernel_x86_64_sse.la nb_kernel010_x86_64_sse.lo nb_kernel030_x86_64_sse.lo nb_kernel100_x86_64_sse.lo nb_kernel101_x86_64_sse.lo nb_kernel102_x86_64_sse.lo nb_kernel103_x86_64_sse.lo nb_kernel104_x86_64_sse.lo nb_kernel110_x86_64_sse.lo nb_kernel111_x86_64_sse.lo nb_kernel112_x86_64_sse.lo nb_kernel113_x86_64_sse.lo nb_kernel114_x86_64_sse.lo nb_kernel130_x86_64_sse.lo nb_kernel131_x86_64_sse.lo nb_kernel132_x86_64_sse.lo nb_kernel133_x86_64_sse.lo nb_kernel134_x86_64_sse.lo nb_kernel200_x86_64_sse.lo nb_kernel201_x86_64_sse.lo nb_kernel202_x86_64_sse.lo nb_kernel203_x86_64_sse.lo nb_kernel204_x86_64_sse.lo nb_kernel210_x86_64_sse.lo nb_kernel211_x86_64_sse.lo nb_kernel212_x86_64_sse.lo nb_kernel213_x86_64_sse.lo nb_kernel214_x86_64_sse.lo nb_kernel230_x86_64_sse.lo nb_kernel231_x86_64_sse.lo nb_kernel232_x86_64_sse.lo nb_kernel233_x86_64_sse.lo nb_kernel234_x86_64_sse.lo nb_kernel300_x86_64_sse.lo nb_kernel301_x86_64_sse.lo nb_kernel302_x86_64_sse.lo nb_kernel303_x86_64_sse.lo nb_kernel304_x86_64_sse.lo nb_kernel310_x86_64_sse.lo nb_kernel311_x86_64_sse.lo nb_kernel312_x86_64_sse.lo nb_kernel313_x86_64_sse.lo nb_kernel314_x86_64_sse.lo nb_kernel330_x86_64_sse.lo nb_kernel331_x86_64_sse.lo nb_kernel332_x86_64_sse.lo nb_kernel333_x86_64_sse.lo nb_kernel334_x86_64_sse.lo nb_kernel400_x86_64_sse.lo nb_kernel410_x86_64_sse.lo nb_kernel430_x86_64_sse.lo nb_kernel_x86_64_sse_test_asm.lo nb_kernel_x86_64_sse.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libnb_kernel_x86_64_sse.a .libs/nb_kernel010_x86_64_sse.o .libs/nb_kernel030_x86_64_sse.o .libs/nb_kernel100_x86_64_sse.o .libs/nb_kernel101_x86_64_sse.o .libs/nb_kernel102_x86_64_sse.o .libs/nb_kernel103_x86_64_sse.o .libs/nb_kernel104_x86_64_sse.o .libs/nb_kernel110_x86_64_sse.o .libs/nb_kernel111_x86_64_sse.o .libs/nb_kernel112_x86_64_sse.o .libs/nb_kernel113_x86_64_sse.o .libs/nb_kernel114_x86_64_sse.o .libs/nb_kernel130_x86_64_sse.o .libs/nb_kernel131_x86_64_sse.o .libs/nb_kernel132_x86_64_sse.o .libs/nb_kernel133_x86_64_sse.o .libs/nb_kernel134_x86_64_sse.o .libs/nb_kernel200_x86_64_sse.o .libs/nb_kernel201_x86_64_sse.o .libs/nb_kernel202_x86_64_sse.o .libs/nb_kernel203_x86_64_sse.o .libs/nb_kernel204_x86_64_sse.o .libs/nb_kernel210_x86_64_sse.o .libs/nb_kernel211_x86_64_sse.o .libs/nb_kernel212_x86_64_sse.o .libs/nb_kernel213_x86_64_sse.o .libs/nb_kernel214_x86_64_sse.o .libs/nb_kernel230_x86_64_sse.o .libs/nb_kernel231_x86_64_sse.o .libs/nb_kernel232_x86_64_sse.o .libs/nb_kernel233_x86_64_sse.o .libs/nb_kernel234_x86_64_sse.o .libs/nb_kernel300_x86_64_sse.o .libs/nb_kernel301_x86_64_sse.o .libs/nb_kernel302_x86_64_sse.o .libs/nb_kernel303_x86_64_sse.o .libs/nb_kernel304_x86_64_sse.o .libs/nb_kernel310_x86_64_sse.o .libs/nb_kernel311_x86_64_sse.o .libs/nb_kernel312_x86_64_sse.o .libs/nb_kernel313_x86_64_sse.o .libs/nb_kernel314_x86_64_sse.o .libs/nb_kernel330_x86_64_sse.o .libs/nb_kernel331_x86_64_sse.o .libs/nb_kernel332_x86_64_sse.o .libs/nb_kernel333_x86_64_sse.o .libs/nb_kernel334_x86_64_sse.o .libs/nb_kernel400_x86_64_sse.o .libs/nb_kernel410_x86_64_sse.o .libs/nb_kernel430_x86_64_sse.o .libs/nb_kernel_x86_64_sse_test_asm.o .libs/nb_kernel_x86_64_sse.o ranlib .libs/libnb_kernel_x86_64_sse.a creating libnb_kernel_x86_64_sse.la (cd .libs && rm -f libnb_kernel_x86_64_sse.la && ln -s ../libnb_kernel_x86_64_sse.la libnb_kernel_x86_64_sse.la) make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' Making all in nb_kernel make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_metacode.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_metacode.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_common.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_common.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_declarations.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_declarations.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_outerloop.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_outerloop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_innerloop.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_innerloop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_interactions.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_interactions.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -o mknb mknb.o mknb_metacode.o mknb_common.o mknb_declarations.o mknb_outerloop.o mknb_innerloop.o mknb_interactions.o rm -f kernel-stamp ./mknb -software_invsqrt -fortran >>> Gromacs nonbonded kernel generator (-h for help) >>> Generating single precision functions in Fortran77. >>> Using Gromacs software version of 1/sqrt(x). Progress: 1% Progress: 2% Progress: 4% Progress: 5% Progress: 7% Progress: 8% Progress: 10% Progress: 11% Progress: 13% Progress: 14% Progress: 16% Progress: 17% Progress: 19% Progress: 20% Progress: 22% Progress: 23% Progress: 25% Progress: 26% Progress: 28% Progress: 29% Progress: 31% Progress: 32% Progress: 34% Progress: 35% Progress: 37% Progress: 38% Progress: 40% Progress: 41% Progress: 43% Progress: 44% Progress: 46% Progress: 47% Progress: 49% Progress: 50% Progress: 52% Progress: 53% Progress: 55% Progress: 56% Progress: 58% Progress: 59% Progress: 61% Progress: 62% Progress: 64% Progress: 65% Progress: 67% Progress: 68% Progress: 70% Progress: 71% Progress: 73% Progress: 74% Progress: 76% Progress: 77% Progress: 79% Progress: 80% Progress: 82% Progress: 83% Progress: 85% Progress: 86% Progress: 88% Progress: 89% Progress: 91% Progress: 92% Progress: 94% Progress: 95% Progress: 97% Progress: 98% Progress: 100% make all-am make[6]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' /bin/sh ../../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel.lo ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel.c /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel010_f.lo nb_kernel010_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel020_f.lo nb_kernel020_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel030_f.lo nb_kernel030_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel100_f.lo nb_kernel100_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel101_f.lo nb_kernel101_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel102_f.lo nb_kernel102_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel103_f.lo nb_kernel103_f.f mkdir .libs f77 -pipe -Wall -g -O2 -c nb_kernel101_f.f -fPIC -o .libs/nb_kernel101_f.o f77 -pipe -Wall -g -O2 -c nb_kernel103_f.f -fPIC -o .libs/nb_kernel103_f.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel.c -fPIC -DPIC -o .libs/nb_kernel.o f77 -pipe -Wall -g -O2 -c nb_kernel100_f.f -fPIC -o .libs/nb_kernel100_f.o nb_kernel101_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:278:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:265:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:274:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:261:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:258:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:276:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:275:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:273:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:264:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:279:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:277:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:268:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:271:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:267:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:269:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:272:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:270:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:282:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:202:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:189:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:198:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:185:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:182:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:200:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:199:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:197:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:188:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:203:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:201:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:192:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:195:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:191:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:193:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:196:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:194:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:206:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel102_f.f -fPIC -o .libs/nb_kernel102_f.o nb_kernel103_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:278:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:265:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:274:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:261:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:258:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:276:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:275:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:273:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:264:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:279:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:277:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:268:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:271:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:267:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:269:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:272:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:270:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:282:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel030_f.f -fPIC -o .libs/nb_kernel030_f.o f77 -pipe -Wall -g -O2 -c nb_kernel010_f.f -fPIC -o .libs/nb_kernel010_f.o f77 -pipe -Wall -g -O2 -c nb_kernel020_f.f -fPIC -o .libs/nb_kernel020_f.o nb_kernel030_f.f:144:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel030_f.f:320:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel030_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:218:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:234:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:221:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:230:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:219:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:217:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:214:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:232:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:231:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:229:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:220:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:235:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:233:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:222:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:238:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:169:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:185:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:172:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:181:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:170:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:168:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:165:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:183:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:182:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:180:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:171:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:186:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:184:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:178:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:173:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:179:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:189:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:196:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:212:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:199:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:208:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:197:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:195:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:192:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:210:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:209:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:207:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:198:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:213:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:211:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:205:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:200:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:206:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:216:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:444:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:431:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:440:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:427:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:424:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:442:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:441:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:439:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:430:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:445:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:443:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:434:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:437:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:433:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:435:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:438:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:436:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:448:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel104_f.lo nb_kernel104_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel110_f.lo nb_kernel110_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel111_f.lo nb_kernel111_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel112_f.lo nb_kernel112_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel113_f.lo nb_kernel113_f.f f77 -pipe -Wall -g -O2 -c nb_kernel104_f.f -fPIC -o .libs/nb_kernel104_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel114_f.lo nb_kernel114_f.f f77 -pipe -Wall -g -O2 -c nb_kernel110_f.f -fPIC -o .libs/nb_kernel110_f.o nb_kernel110_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:218:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:444:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:205:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:214:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:201:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:198:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:216:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:215:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:213:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:204:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:219:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:217:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:211:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:212:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:222:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:431:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:440:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:427:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:424:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:442:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:441:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:439:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:430:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:445:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:443:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:434:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:437:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:433:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:435:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:438:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:436:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:448:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel111_f.f -fPIC -o .libs/nb_kernel111_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel120_f.lo nb_kernel120_f.f nb_kernel111_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:294:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:281:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:290:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:277:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:274:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:292:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:291:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:289:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:280:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:295:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:293:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:287:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:288:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:298:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel121_f.lo nb_kernel121_f.f f77 -pipe -Wall -g -O2 -c nb_kernel112_f.f -fPIC -o .libs/nb_kernel112_f.o f77 -pipe -Wall -g -O2 -c nb_kernel113_f.f -fPIC -o .libs/nb_kernel113_f.o nb_kernel112_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:458:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:445:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:454:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:441:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:438:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:456:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:455:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:453:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:444:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:459:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:457:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:451:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:452:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:462:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:320:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:307:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:316:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:303:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:300:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:318:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:317:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:315:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:306:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:321:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:319:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:313:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:314:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:324:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel114_f.f -fPIC -o .libs/nb_kernel114_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel122_f.lo nb_kernel122_f.f nb_kernel114_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:488:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:475:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:484:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:471:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:468:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:486:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:485:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:483:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:474:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:489:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:487:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:481:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:482:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:492:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel120_f.f -fPIC -o .libs/nb_kernel120_f.o f77 -pipe -Wall -g -O2 -c nb_kernel121_f.f -fPIC -o .libs/nb_kernel121_f.o nb_kernel120_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:220:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:207:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:216:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:203:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:200:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:218:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:217:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:215:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:206:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:221:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:219:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:213:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:214:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:224:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:296:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:283:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:292:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:279:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:276:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:294:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:293:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:291:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:282:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:297:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:295:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:289:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:290:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:300:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel123_f.lo nb_kernel123_f.f f77 -pipe -Wall -g -O2 -c nb_kernel122_f.f -fPIC -o .libs/nb_kernel122_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel124_f.lo nb_kernel124_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel130_f.lo nb_kernel130_f.f nb_kernel122_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:460:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:447:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:456:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:443:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:440:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:458:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:457:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:455:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:446:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:461:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:459:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:453:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:454:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:464:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel131_f.lo nb_kernel131_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel132_f.lo nb_kernel132_f.f f77 -pipe -Wall -g -O2 -c nb_kernel123_f.f -fPIC -o .libs/nb_kernel123_f.o nb_kernel123_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:329:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:316:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:325:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:312:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:309:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:327:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:326:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:324:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:315:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:330:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:328:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:322:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:323:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:333:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel124_f.f -fPIC -o .libs/nb_kernel124_f.o nb_kernel124_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:497:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:484:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:493:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:480:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:477:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:495:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:494:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:492:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:483:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:498:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:496:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:490:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:491:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:501:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel132_f.f -fPIC -o .libs/nb_kernel132_f.o nb_kernel132_f.f:275:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel132_f.f:694:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel132_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:485:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:472:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:481:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:468:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:465:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:483:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:482:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:480:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:471:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:486:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:484:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:489:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel130_f.f -fPIC -o .libs/nb_kernel130_f.o f77 -pipe -Wall -g -O2 -c nb_kernel131_f.f -fPIC -o .libs/nb_kernel131_f.o nb_kernel130_f.f:153:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel130_f.f:338:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel130_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:245:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:232:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:241:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:228:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:225:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:243:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:242:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:240:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:231:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:246:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:244:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:249:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:196:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel131_f.f:451:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel131_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:321:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:308:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:317:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:304:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:301:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:319:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:318:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:316:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:307:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:322:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:320:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:325:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel133_f.lo nb_kernel133_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel134_f.lo nb_kernel134_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel200_f.lo nb_kernel200_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel201_f.lo nb_kernel201_f.f f77 -pipe -Wall -g -O2 -c nb_kernel134_f.f -fPIC -o .libs/nb_kernel134_f.o f77 -pipe -Wall -g -O2 -c nb_kernel133_f.f -fPIC -o .libs/nb_kernel133_f.o nb_kernel133_f.f:210:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] f77 -pipe -Wall -g -O2 -c nb_kernel201_f.f -fPIC -o .libs/nb_kernel201_f.o nb_kernel133_f.f:494:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel133_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:352:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:339:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:294:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel133_f.f:348:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:335:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:332:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:350:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:349:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:347:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:338:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:353:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:351:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:356:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:746:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel134_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel202_f.lo nb_kernel202_f.f nb_kernel134_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:282:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:278:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:265:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:262:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:280:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:279:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:277:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:283:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:281:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:272:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:275:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:271:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:273:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:276:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:274:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:286:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:520:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:507:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:516:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:503:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:500:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:518:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:517:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:515:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:506:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:521:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:519:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:524:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel200_f.f -fPIC -o .libs/nb_kernel200_f.o nb_kernel200_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:204:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:200:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:187:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:184:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:202:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:201:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:199:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:205:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:203:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:194:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:197:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:193:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:195:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:198:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:196:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:208:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel203_f.lo nb_kernel203_f.f f77 -pipe -Wall -g -O2 -c nb_kernel202_f.f -fPIC -o .libs/nb_kernel202_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel204_f.lo nb_kernel204_f.f nb_kernel202_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:454:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:450:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:437:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:434:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:452:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:451:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:449:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:455:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:453:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:444:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:447:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:443:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:445:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:448:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:446:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:458:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel210_f.lo nb_kernel210_f.f f77 -pipe -Wall -g -O2 -c nb_kernel203_f.f -fPIC -o .libs/nb_kernel203_f.o nb_kernel203_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:282:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:278:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:265:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:262:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:280:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:279:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:277:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:283:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:281:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:272:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:275:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:271:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:273:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:276:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:274:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:286:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel204_f.f -fPIC -o .libs/nb_kernel204_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel211_f.lo nb_kernel211_f.f nb_kernel204_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:454:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:450:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:437:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:434:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:452:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:451:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:449:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:455:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:453:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:444:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:447:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:443:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:445:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:448:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:446:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:458:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel212_f.lo nb_kernel212_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel213_f.lo nb_kernel213_f.f f77 -pipe -Wall -g -O2 -c nb_kernel210_f.f -fPIC -o .libs/nb_kernel210_f.o f77 -pipe -Wall -g -O2 -c nb_kernel211_f.f -fPIC -o .libs/nb_kernel211_f.o nb_kernel210_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:221:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:217:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:204:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:201:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:219:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:218:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:216:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:222:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:220:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:214:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:215:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:225:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel212_f.f -fPIC -o .libs/nb_kernel212_f.o nb_kernel211_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:299:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:295:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:282:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:279:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:297:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:296:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:294:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:300:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:298:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:292:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:293:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:303:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:469:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:465:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:452:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:449:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:467:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:466:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:464:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:470:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:468:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:462:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:463:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:473:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel214_f.lo nb_kernel214_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel220_f.lo nb_kernel220_f.f f77 -pipe -Wall -g -O2 -c nb_kernel213_f.f -fPIC -o .libs/nb_kernel213_f.o nb_kernel213_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:324:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:320:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:307:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:304:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:322:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:321:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:319:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:325:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:323:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:317:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:318:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:328:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel221_f.lo nb_kernel221_f.f f77 -pipe -Wall -g -O2 -c nb_kernel220_f.f -fPIC -o .libs/nb_kernel220_f.o f77 -pipe -Wall -g -O2 -c nb_kernel214_f.f -fPIC -o .libs/nb_kernel214_f.o nb_kernel220_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:223:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:219:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:206:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:203:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:221:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:220:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:218:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:224:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:222:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:216:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:217:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:227:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:498:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:494:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:481:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:478:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:496:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:495:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:493:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:499:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:497:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:491:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:492:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:502:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel222_f.lo nb_kernel222_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel223_f.lo nb_kernel223_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel224_f.lo nb_kernel224_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel230_f.lo nb_kernel230_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel231_f.lo nb_kernel231_f.f f77 -pipe -Wall -g -O2 -c nb_kernel221_f.f -fPIC -o .libs/nb_kernel221_f.o f77 -pipe -Wall -g -O2 -c nb_kernel223_f.f -fPIC -o .libs/nb_kernel223_f.o nb_kernel223_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel222_f.f -fPIC -o .libs/nb_kernel222_f.o nb_kernel223_f.f:333:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:329:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:316:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:313:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:331:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:330:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:328:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:334:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:332:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:326:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:327:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:337:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:301:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:297:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:284:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:281:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:299:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:298:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:296:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:302:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:300:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:294:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:295:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:305:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel224_f.f -fPIC -o .libs/nb_kernel224_f.o nb_kernel222_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:471:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:467:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:454:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:451:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:469:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:468:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:466:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:472:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:470:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:464:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:465:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:475:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:507:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:503:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:490:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:487:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:505:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:504:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:502:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:508:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:506:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:500:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:501:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:511:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel231_f.f -fPIC -o .libs/nb_kernel231_f.o f77 -pipe -Wall -g -O2 -c nb_kernel230_f.f -fPIC -o .libs/nb_kernel230_f.o nb_kernel231_f.f:198:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel231_f.f:457:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel231_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:325:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:321:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:308:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:305:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:323:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:322:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:320:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:326:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:324:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:329:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:155:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel230_f.f:342:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel230_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:247:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:243:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:230:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:227:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:245:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:244:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:242:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:248:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:246:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:251:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel232_f.lo nb_kernel232_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel233_f.lo nb_kernel233_f.f f77 -pipe -Wall -g -O2 -c nb_kernel232_f.f -fPIC -o .libs/nb_kernel232_f.o nb_kernel232_f.f:277:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel232_f.f:706:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel232_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:495:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:491:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:478:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:475:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:493:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:492:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:490:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:496:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:494:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:499:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel234_f.lo nb_kernel234_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel300_f.lo nb_kernel300_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel301_f.lo nb_kernel301_f.f f77 -pipe -Wall -g -O2 -c nb_kernel233_f.f -fPIC -o .libs/nb_kernel233_f.o nb_kernel233_f.f:211:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel233_f.f:499:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel233_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:356:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:352:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:339:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:336:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:354:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:353:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:351:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:357:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:355:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:360:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel302_f.lo nb_kernel302_f.f f77 -pipe -Wall -g -O2 -c nb_kernel234_f.f -fPIC -o .libs/nb_kernel234_f.o nb_kernel234_f.f:295:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel234_f.f:757:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel234_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:530:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:526:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:513:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:510:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:528:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:527:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:525:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:531:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:529:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:534:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel303_f.lo nb_kernel303_f.f f77 -pipe -Wall -g -O2 -c nb_kernel301_f.f -fPIC -o .libs/nb_kernel301_f.o f77 -pipe -Wall -g -O2 -c nb_kernel300_f.f -fPIC -o .libs/nb_kernel300_f.o nb_kernel301_f.f:182:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:209:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:235:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:439:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:454:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:468:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:321:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:308:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:317:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:304:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:301:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:319:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:318:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:316:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:307:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:322:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:320:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:311:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:310:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:312:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:313:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:325:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:139:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel300_f.f:300:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel300_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:219:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:206:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:215:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:202:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:199:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:217:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:216:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:214:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:205:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:220:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:218:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:209:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:208:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:210:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:211:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:223:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel302_f.f -fPIC -o .libs/nb_kernel302_f.o f77 -pipe -Wall -g -O2 -c nb_kernel303_f.f -fPIC -o .libs/nb_kernel303_f.o nb_kernel302_f.f:263:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:290:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:317:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:344:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:371:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:398:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:425:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:452:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:479:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:764:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel304_f.lo nb_kernel304_f.f nb_kernel302_f.f:779:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:794:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:809:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:824:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:839:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:854:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:869:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:884:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:182:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:208:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:235:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:439:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:565:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:552:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:561:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:548:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:545:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:563:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:562:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:560:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:551:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:566:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:564:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:555:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:554:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:556:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:557:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:569:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:453:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:468:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:321:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:308:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:317:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:304:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:301:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:319:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:318:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:316:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:307:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:322:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:320:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:311:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:310:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:312:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:313:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:325:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel310_f.lo nb_kernel310_f.f f77 -pipe -Wall -g -O2 -c nb_kernel304_f.f -fPIC -o .libs/nb_kernel304_f.o nb_kernel304_f.f:263:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:290:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:317:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:344:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:371:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:398:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:425:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:452:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:479:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:764:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:779:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:794:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:809:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:824:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:839:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:854:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:869:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:884:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel311_f.lo nb_kernel311_f.f nb_kernel304_f.f:565:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:552:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:561:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:548:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:545:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:563:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:562:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:560:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:551:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:566:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:564:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:555:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:554:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:556:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:557:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:569:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel312_f.lo nb_kernel312_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel313_f.lo nb_kernel313_f.f f77 -pipe -Wall -g -O2 -c nb_kernel310_f.f -fPIC -o .libs/nb_kernel310_f.o nb_kernel310_f.f:152:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel310_f.f:332:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel310_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:238:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:225:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:234:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:221:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:218:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:236:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:235:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:233:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:224:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:239:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:237:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:242:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel314_f.lo nb_kernel314_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel320_f.lo nb_kernel320_f.f f77 -pipe -Wall -g -O2 -c nb_kernel312_f.f -fPIC -o .libs/nb_kernel312_f.o nb_kernel312_f.f:274:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:306:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:333:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:360:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:387:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:414:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:441:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:468:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:495:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:792:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:811:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:826:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:841:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:856:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:871:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:886:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:901:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:916:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:582:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:569:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:578:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:565:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:562:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:580:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:579:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:577:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:568:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:583:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:581:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:586:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel311_f.f -fPIC -o .libs/nb_kernel311_f.o f77 -pipe -Wall -g -O2 -c nb_kernel313_f.f -fPIC -o .libs/nb_kernel313_f.o nb_kernel311_f.f:195:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:227:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:253:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:221:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:247:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:274:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] f77 -pipe -Wall -g -O2 -c nb_kernel314_f.f -fPIC -o .libs/nb_kernel314_f.o nb_kernel311_f.f:471:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:490:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:504:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:508:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:522:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:537:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:364:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:351:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:360:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:347:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:344:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:362:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:361:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:359:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:350:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:365:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:363:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:368:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:340:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:327:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:336:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:323:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:320:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:338:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:337:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:335:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:326:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:341:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:339:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:344:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:304:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:331:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:358:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:385:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:412:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:439:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:466:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:493:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:520:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel321_f.lo nb_kernel321_f.f nb_kernel314_f.f:837:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:852:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:867:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:882:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:897:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:912:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:927:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:942:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:957:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:610:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:597:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:606:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:593:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:590:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:608:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:607:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:605:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:596:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:611:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:609:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:614:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel320_f.f -fPIC -o .libs/nb_kernel320_f.o nb_kernel320_f.f:153:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel320_f.f:335:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel320_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:240:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:227:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:236:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:223:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:220:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:238:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:237:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:235:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:226:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:241:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:239:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:244:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel322_f.lo nb_kernel322_f.f f77 -pipe -Wall -g -O2 -c nb_kernel321_f.f -fPIC -o .libs/nb_kernel321_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel323_f.lo nb_kernel323_f.f nb_kernel321_f.f:196:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:229:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:255:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:474:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:494:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:508:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:342:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:329:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:338:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:325:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:322:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:340:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:339:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:337:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:328:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:343:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:341:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:346:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel324_f.lo nb_kernel324_f.f f77 -pipe -Wall -g -O2 -c nb_kernel322_f.f -fPIC -o .libs/nb_kernel322_f.o nb_kernel322_f.f:275:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:308:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:335:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:362:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:389:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:416:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:443:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:470:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:497:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:795:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:815:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:830:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:845:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:860:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:875:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:890:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:905:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:920:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:584:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:571:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:580:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:567:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:564:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:582:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:581:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:579:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:570:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:585:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:583:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:588:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel330_f.lo nb_kernel330_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel331_f.lo nb_kernel331_f.f f77 -pipe -Wall -g -O2 -c nb_kernel324_f.f -fPIC -o .libs/nb_kernel324_f.o f77 -pipe -Wall -g -O2 -c nb_kernel323_f.f -fPIC -o .libs/nb_kernel323_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel332_f.lo nb_kernel332_f.f nb_kernel324_f.f:313:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:340:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:367:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:394:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:421:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:448:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:475:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:502:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:529:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:855:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:870:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:885:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:900:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:915:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:930:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:945:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:960:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:975:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:619:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:606:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:615:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:602:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:599:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:617:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:616:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:614:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:605:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:620:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:618:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:623:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:230:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:256:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:283:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:526:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:540:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:555:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel330_f.f -fPIC -o .libs/nb_kernel330_f.o nb_kernel323_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:373:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:360:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:369:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:356:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:353:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:371:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:370:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:368:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:359:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:374:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:372:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:377:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:150:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel330_f.f:343:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel330_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:252:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:239:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:248:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:235:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:232:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:250:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:249:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:247:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:238:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:253:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:251:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:256:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel331_f.f -fPIC -o .libs/nb_kernel331_f.o nb_kernel331_f.f:193:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:241:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:267:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:482:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:514:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:528:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:354:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:341:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:350:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:337:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:334:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:352:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:351:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:349:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:340:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:355:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:353:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:358:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel332_f.f -fPIC -o .libs/nb_kernel332_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel333_f.lo nb_kernel333_f.f nb_kernel332_f.f:272:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:320:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:347:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:374:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:401:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:428:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:455:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:482:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:509:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:803:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:835:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:850:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:865:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:880:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:895:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:910:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:925:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:940:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:596:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:583:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:592:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:579:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:576:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:594:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:593:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:591:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:582:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:597:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:595:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:600:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel334_f.lo nb_kernel334_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel400_f.lo nb_kernel400_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel410_f.lo nb_kernel410_f.f f77 -pipe -Wall -g -O2 -c nb_kernel333_f.f -fPIC -o .libs/nb_kernel333_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel420_f.lo nb_kernel420_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel430_f.lo nb_kernel430_f.f nb_kernel333_f.f:210:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:249:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:275:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:302:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:534:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:559:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:573:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:588:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:392:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:379:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:388:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:375:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:372:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:390:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:389:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:387:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:378:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:393:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:391:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:396:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel334_f.f -fPIC -o .libs/nb_kernel334_f.o f77 -pipe -Wall -g -O2 -c nb_kernel410_f.f -fPIC -o .libs/nb_kernel410_f.o f77 -pipe -Wall -g -O2 -c nb_kernel420_f.f -fPIC -o .libs/nb_kernel420_f.o nb_kernel410_f.f:160:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel410_f.f:349:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] f77 -pipe -Wall -g -O2 -c nb_kernel400_f.f -fPIC -o .libs/nb_kernel400_f.o nb_kernel410_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:250:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:237:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:246:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:233:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:230:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:236:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:251:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:249:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:243:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:244:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:254:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:161:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel420_f.f:352:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel420_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:252:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:239:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:248:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:235:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:232:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:238:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:253:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:251:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:245:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:246:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:256:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:147:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel400_f.f:317:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] f77 -pipe -Wall -g -O2 -c nb_kernel430_f.f -fPIC -o .libs/nb_kernel430_f.o nb_kernel400_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:231:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:218:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:227:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:214:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:211:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:217:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:232:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:230:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:221:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:224:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:220:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:222:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:225:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:223:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:235:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:294:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:332:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:359:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:386:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:413:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:440:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:467:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:494:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:521:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:548:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:864:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:888:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:903:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:918:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:933:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:948:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:963:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:978:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:993:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1008:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:638:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:625:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:634:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:621:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:618:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:636:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:635:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:633:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:624:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:639:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:637:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:642:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:158:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:177:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:365:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:379:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:269:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:256:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:265:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:252:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:249:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:255:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:270:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:268:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:273:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_f77sync.lo ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel_f77sync.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel_f77sync.c -fPIC -DPIC -o .libs/nb_kernel_f77sync.o /bin/sh ../../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnb_kernel.la nb_kernel.lo nb_kernel010_f.lo nb_kernel020_f.lo nb_kernel030_f.lo nb_kernel100_f.lo nb_kernel101_f.lo nb_kernel102_f.lo nb_kernel103_f.lo nb_kernel104_f.lo nb_kernel110_f.lo nb_kernel111_f.lo nb_kernel112_f.lo nb_kernel113_f.lo nb_kernel114_f.lo nb_kernel120_f.lo nb_kernel121_f.lo nb_kernel122_f.lo nb_kernel123_f.lo nb_kernel124_f.lo nb_kernel130_f.lo nb_kernel131_f.lo nb_kernel132_f.lo nb_kernel133_f.lo nb_kernel134_f.lo nb_kernel200_f.lo nb_kernel201_f.lo nb_kernel202_f.lo nb_kernel203_f.lo nb_kernel204_f.lo nb_kernel210_f.lo nb_kernel211_f.lo nb_kernel212_f.lo nb_kernel213_f.lo nb_kernel214_f.lo nb_kernel220_f.lo nb_kernel221_f.lo nb_kernel222_f.lo nb_kernel223_f.lo nb_kernel224_f.lo nb_kernel230_f.lo nb_kernel231_f.lo nb_kernel232_f.lo nb_kernel233_f.lo nb_kernel234_f.lo nb_kernel300_f.lo nb_kernel301_f.lo nb_kernel302_f.lo nb_kernel303_f.lo nb_kernel304_f.lo nb_kernel310_f.lo nb_kernel311_f.lo nb_kernel312_f.lo nb_kernel313_f.lo nb_kernel314_f.lo nb_kernel320_f.lo nb_kernel321_f.lo nb_kernel322_f.lo nb_kernel323_f.lo nb_kernel324_f.lo nb_kernel330_f.lo nb_kernel331_f.lo nb_kernel332_f.lo nb_kernel333_f.lo nb_kernel334_f.lo nb_kernel400_f.lo nb_kernel410_f.lo nb_kernel420_f.lo nb_kernel430_f.lo nb_kernel_f77sync.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libnb_kernel.a .libs/nb_kernel.o .libs/nb_kernel010_f.o .libs/nb_kernel020_f.o .libs/nb_kernel030_f.o .libs/nb_kernel100_f.o .libs/nb_kernel101_f.o .libs/nb_kernel102_f.o .libs/nb_kernel103_f.o .libs/nb_kernel104_f.o .libs/nb_kernel110_f.o .libs/nb_kernel111_f.o .libs/nb_kernel112_f.o .libs/nb_kernel113_f.o .libs/nb_kernel114_f.o .libs/nb_kernel120_f.o .libs/nb_kernel121_f.o .libs/nb_kernel122_f.o .libs/nb_kernel123_f.o .libs/nb_kernel124_f.o .libs/nb_kernel130_f.o .libs/nb_kernel131_f.o .libs/nb_kernel132_f.o .libs/nb_kernel133_f.o .libs/nb_kernel134_f.o .libs/nb_kernel200_f.o .libs/nb_kernel201_f.o .libs/nb_kernel202_f.o .libs/nb_kernel203_f.o .libs/nb_kernel204_f.o .libs/nb_kernel210_f.o .libs/nb_kernel211_f.o .libs/nb_kernel212_f.o .libs/nb_kernel213_f.o .libs/nb_kernel214_f.o .libs/nb_kernel220_f.o .libs/nb_kernel221_f.o .libs/nb_kernel222_f.o .libs/nb_kernel223_f.o .libs/nb_kernel224_f.o .libs/nb_kernel230_f.o .libs/nb_kernel231_f.o .libs/nb_kernel232_f.o .libs/nb_kernel233_f.o .libs/nb_kernel234_f.o .libs/nb_kernel300_f.o .libs/nb_kernel301_f.o .libs/nb_kernel302_f.o .libs/nb_kernel303_f.o .libs/nb_kernel304_f.o .libs/nb_kernel310_f.o .libs/nb_kernel311_f.o .libs/nb_kernel312_f.o .libs/nb_kernel313_f.o .libs/nb_kernel314_f.o .libs/nb_kernel320_f.o .libs/nb_kernel321_f.o .libs/nb_kernel322_f.o .libs/nb_kernel323_f.o .libs/nb_kernel324_f.o .libs/nb_kernel330_f.o .libs/nb_kernel331_f.o .libs/nb_kernel332_f.o .libs/nb_kernel333_f.o .libs/nb_kernel334_f.o .libs/nb_kernel400_f.o .libs/nb_kernel410_f.o .libs/nb_kernel420_f.o .libs/nb_kernel430_f.o .libs/nb_kernel_f77sync.o ranlib .libs/libnb_kernel.a creating libnb_kernel.la (cd .libs && rm -f libnb_kernel.la && ln -s ../libnb_kernel.la libnb_kernel.la) make[6]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nonbonded.lo ../../../../src/gmxlib/nonbonded/nonbonded.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_free_energy.lo ../../../../src/gmxlib/nonbonded/nb_free_energy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_generic.lo ../../../../src/gmxlib/nonbonded/nb_generic.c mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nonbonded.c -fPIC -DPIC -o .libs/nonbonded.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nb_free_energy.c -fPIC -DPIC -o .libs/nb_free_energy.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nb_generic.c -fPIC -DPIC -o .libs/nb_generic.o ../../../../src/gmxlib/nonbonded/nb_free_energy.c: In function 'gmx_nb_free_energy_kernel': ../../../../src/gmxlib/nonbonded/nb_free_energy.c:100:25: warning: unused variable 'H' [-Wunused-variable] real Y,F,G,H,Fp,Geps,Heps2,eps,eps2,VV,FF; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:100:23: warning: unused variable 'G' [-Wunused-variable] real Y,F,G,H,Fp,Geps,Heps2,eps,eps2,VV,FF; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:89:19: warning: unused variable 'rinvsix' [-Wunused-variable] real rinvsix; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:86:27: warning: unused variable 'vcoul' [-Wunused-variable] real qqA,qqB,vcoul,vctot,krsq; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nb_free_energy.c:42: ../../../../src/gmxlib/nonbonded/nb_free_energy.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nb_free_energy.c:42:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../../src/gmxlib/nonbonded/nonbonded.c: In function 'do_nonbonded': ../../../../src/gmxlib/nonbonded/nonbonded.c:283:18: warning: unused variable 'fp' [-Wunused-variable] FILE * fp; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:281:18: warning: unused variable 'bWater' [-Wunused-variable] bool bWater; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:279:43: warning: unused variable 'sz' [-Wunused-variable] int n,n0,n1,i,i0,i1,nrnb_ind,sz; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c: In function 'do_listed_vdw_q': ../../../../src/gmxlib/nonbonded/nonbonded.c:547:15: warning: unused variable 'tmplist' [-Wunused-variable] t_nblist tmplist; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:538:25: warning: unused variable 'i2' [-Wunused-variable] int i0=0,i1=1,i2=2; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nonbonded.c:50: ../../../../src/gmxlib/nonbonded/nonbonded.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nonbonded.c:50:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../../src/gmxlib/nonbonded/nonbonded.c:53:0: ../../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c: In function 'gmx_nb_generic_kernel': ../../../../src/gmxlib/nonbonded/nb_generic.c:82:16: warning: unused variable 'shift' [-Wunused-variable] int * shift; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c:62:25: warning: unused variable 'gbtabscale' [-Wunused-variable] real facel,gbtabscale; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c:61:19: warning: unused variable 'nri' [-Wunused-variable] int nri,ntype,table_nelements,icoul,ivdw; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nb_generic.c:43: ../../../../src/gmxlib/nonbonded/nb_generic.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nb_generic.c:43:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnonbonded.la nonbonded.lo nb_free_energy.lo nb_generic.lo nb_kernel_x86_64_sse/libnb_kernel_x86_64_sse.la nb_kernel/libnb_kernel.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath rm -fr .libs/libnonbonded.lax mkdir .libs/libnonbonded.lax rm -fr .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a mkdir .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a (cd .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a && ar x /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/.libs/libnb_kernel_x86_64_sse.a) rm -fr .libs/libnonbonded.lax/libnb_kernel.a mkdir .libs/libnonbonded.lax/libnb_kernel.a (cd .libs/libnonbonded.lax/libnb_kernel.a && ar x /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel/.libs/libnb_kernel.a) ar cru .libs/libnonbonded.a .libs/nonbonded.o .libs/nb_free_energy.o .libs/nb_generic.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel_x86_64_sse_test_asm.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel430_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel410_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel400_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel334_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel333_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel332_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel331_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel330_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel314_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel313_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel312_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel311_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel310_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel304_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel303_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel302_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel301_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel300_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel234_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel233_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel232_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel231_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel230_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel214_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel213_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel212_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel211_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel210_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel204_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel203_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel202_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel201_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel200_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel134_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel133_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel132_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel131_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel130_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel114_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel113_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel112_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel111_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel110_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel104_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel103_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel102_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel101_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel100_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel030_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel010_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel_f77sync.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel430_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel420_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel410_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel400_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel334_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel333_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel332_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel331_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel330_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel324_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel323_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel322_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel321_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel320_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel314_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel313_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel312_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel311_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel310_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel304_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel303_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel302_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel301_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel300_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel234_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel233_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel232_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel231_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel230_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel224_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel223_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel222_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel221_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel220_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel214_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel213_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel212_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel211_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel210_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel204_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel203_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel202_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel201_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel200_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel134_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel133_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel132_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel131_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel130_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel124_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel123_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel122_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel121_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel120_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel114_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel113_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel112_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel111_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel110_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel104_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel103_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel102_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel101_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel100_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel030_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel020_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel010_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel.o ranlib .libs/libnonbonded.a rm -fr .libs/libnonbonded.lax creating libnonbonded.la (cd .libs && rm -f libnonbonded.la && ln -s ../libnonbonded.la libnonbonded.la) make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' Making all in gmx_blas make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_blas' /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dasum.lo ../../../../src/gmxlib/gmx_blas/dasum.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dcopy.lo ../../../../src/gmxlib/gmx_blas/dcopy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgemm.lo ../../../../src/gmxlib/gmx_blas/dgemm.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dger.lo ../../../../src/gmxlib/gmx_blas/dger.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o drot.lo ../../../../src/gmxlib/gmx_blas/drot.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dswap.lo ../../../../src/gmxlib/gmx_blas/dswap.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyr2.lo ../../../../src/gmxlib/gmx_blas/dsyr2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrmm.lo ../../../../src/gmxlib/gmx_blas/dtrmm.c mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dgemm.c -fPIC -DPIC -o .libs/dgemm.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dger.c -fPIC -DPIC -o .libs/dger.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/drot.c -fPIC -DPIC -o .libs/drot.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrmm.c -fPIC -DPIC -o .libs/dtrmm.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dcopy.c -fPIC -DPIC -o .libs/dcopy.o ../../../../src/gmxlib/gmx_blas/dgemm.c: In function 'dgemm_': ../../../../src/gmxlib/gmx_blas/dgemm.c:27:19: warning: variable 'nrowb' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/dgemm.c:27:13: warning: variable 'ncola' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/dgemm.c:27:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dswap.c -fPIC -DPIC -o .libs/dswap.o ../../../../src/gmxlib/gmx_blas/dtrmm.c: In function 'dtrmm_': ../../../../src/gmxlib/gmx_blas/dtrmm.c:32:9: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ ../../../../src/gmxlib/gmx_blas/dtrmm.c:29:20: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, k, info; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsyr2.c -fPIC -DPIC -o .libs/dsyr2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dasum.c -fPIC -DPIC -o .libs/dasum.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrsm.lo ../../../../src/gmxlib/gmx_blas/dtrsm.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o daxpy.lo ../../../../src/gmxlib/gmx_blas/daxpy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ddot.lo ../../../../src/gmxlib/gmx_blas/ddot.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgemv.lo ../../../../src/gmxlib/gmx_blas/dgemv.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dnrm2.lo ../../../../src/gmxlib/gmx_blas/dnrm2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dscal.lo ../../../../src/gmxlib/gmx_blas/dscal.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/daxpy.c -fPIC -DPIC -o .libs/daxpy.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsymv.lo ../../../../src/gmxlib/gmx_blas/dsymv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrsm.c -fPIC -DPIC -o .libs/dtrsm.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyr2k.lo ../../../../src/gmxlib/gmx_blas/dsyr2k.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ddot.c -fPIC -DPIC -o .libs/ddot.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dnrm2.c -fPIC -DPIC -o .libs/dnrm2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dscal.c -fPIC -DPIC -o .libs/dscal.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dgemv.c -fPIC -DPIC -o .libs/dgemv.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrmv.lo ../../../../src/gmxlib/gmx_blas/dtrmv.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o idamax.lo ../../../../src/gmxlib/gmx_blas/idamax.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sasum.lo ../../../../src/gmxlib/gmx_blas/sasum.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o scopy.lo ../../../../src/gmxlib/gmx_blas/scopy.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsymv.c -fPIC -DPIC -o .libs/dsymv.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgemm.lo ../../../../src/gmxlib/gmx_blas/sgemm.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsyr2k.c -fPIC -DPIC -o .libs/dsyr2k.o ../../../../src/gmxlib/gmx_blas/dsyr2k.c: In function 'dsyr2k_': ../../../../src/gmxlib/gmx_blas/dsyr2k.c:23:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrmv.c -fPIC -DPIC -o .libs/dtrmv.o ../../../../src/gmxlib/gmx_blas/dtrmv.c: In function 'dtrmv_': ../../../../src/gmxlib/gmx_blas/dtrmv.c:18:29: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, ix, jx, kx, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sger.lo ../../../../src/gmxlib/gmx_blas/sger.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sasum.c -fPIC -DPIC -o .libs/sasum.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/scopy.c -fPIC -DPIC -o .libs/scopy.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/idamax.c -fPIC -DPIC -o .libs/idamax.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o srot.lo ../../../../src/gmxlib/gmx_blas/srot.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sgemm.c -fPIC -DPIC -o .libs/sgemm.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sswap.lo ../../../../src/gmxlib/gmx_blas/sswap.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyr2.lo ../../../../src/gmxlib/gmx_blas/ssyr2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strmm.lo ../../../../src/gmxlib/gmx_blas/strmm.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strsm.lo ../../../../src/gmxlib/gmx_blas/strsm.c ../../../../src/gmxlib/gmx_blas/sgemm.c: In function 'sgemm_': ../../../../src/gmxlib/gmx_blas/sgemm.c:26:19: warning: variable 'nrowb' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/sgemm.c:26:13: warning: variable 'ncola' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/sgemm.c:26:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sger.c -fPIC -DPIC -o .libs/sger.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strsm.c -fPIC -DPIC -o .libs/strsm.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssyr2.c -fPIC -DPIC -o .libs/ssyr2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o saxpy.lo ../../../../src/gmxlib/gmx_blas/saxpy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sdot.lo ../../../../src/gmxlib/gmx_blas/sdot.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sswap.c -fPIC -DPIC -o .libs/sswap.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/srot.c -fPIC -DPIC -o .libs/srot.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strmm.c -fPIC -DPIC -o .libs/strmm.o ../../../../src/gmxlib/gmx_blas/strmm.c: In function 'strmm_': ../../../../src/gmxlib/gmx_blas/strmm.c:31:9: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ ../../../../src/gmxlib/gmx_blas/strmm.c:28:20: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, k, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgemv.lo ../../../../src/gmxlib/gmx_blas/sgemv.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o snrm2.lo ../../../../src/gmxlib/gmx_blas/snrm2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/saxpy.c -fPIC -DPIC -o .libs/saxpy.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sscal.lo ../../../../src/gmxlib/gmx_blas/sscal.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sdot.c -fPIC -DPIC -o .libs/sdot.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssymv.lo ../../../../src/gmxlib/gmx_blas/ssymv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sgemv.c -fPIC -DPIC -o .libs/sgemv.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyr2k.lo ../../../../src/gmxlib/gmx_blas/ssyr2k.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strmv.lo ../../../../src/gmxlib/gmx_blas/strmv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/snrm2.c -fPIC -DPIC -o .libs/snrm2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sscal.c -fPIC -DPIC -o .libs/sscal.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o isamax.lo ../../../../src/gmxlib/gmx_blas/isamax.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssymv.c -fPIC -DPIC -o .libs/ssymv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strmv.c -fPIC -DPIC -o .libs/strmv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssyr2k.c -fPIC -DPIC -o .libs/ssyr2k.o ../../../../src/gmxlib/gmx_blas/strmv.c: In function 'strmv_': ../../../../src/gmxlib/gmx_blas/strmv.c:18:29: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, ix, jx, kx, info; ^ ../../../../src/gmxlib/gmx_blas/ssyr2k.c: In function 'ssyr2k_': ../../../../src/gmxlib/gmx_blas/ssyr2k.c:22:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/isamax.c -fPIC -DPIC -o .libs/isamax.o /bin/sh ../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libblas.la dasum.lo dcopy.lo dgemm.lo dger.lo drot.lo dswap.lo dsyr2.lo dtrmm.lo dtrsm.lo daxpy.lo ddot.lo dgemv.lo dnrm2.lo dscal.lo dsymv.lo dsyr2k.lo dtrmv.lo idamax.lo sasum.lo scopy.lo sgemm.lo sger.lo srot.lo sswap.lo ssyr2.lo strmm.lo strsm.lo saxpy.lo sdot.lo sgemv.lo snrm2.lo sscal.lo ssymv.lo ssyr2k.lo strmv.lo isamax.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libblas.a .libs/dasum.o .libs/dcopy.o .libs/dgemm.o .libs/dger.o .libs/drot.o .libs/dswap.o .libs/dsyr2.o .libs/dtrmm.o .libs/dtrsm.o .libs/daxpy.o .libs/ddot.o .libs/dgemv.o .libs/dnrm2.o .libs/dscal.o .libs/dsymv.o .libs/dsyr2k.o .libs/dtrmv.o .libs/idamax.o .libs/sasum.o .libs/scopy.o .libs/sgemm.o .libs/sger.o .libs/srot.o .libs/sswap.o .libs/ssyr2.o .libs/strmm.o .libs/strsm.o .libs/saxpy.o .libs/sdot.o .libs/sgemv.o .libs/snrm2.o .libs/sscal.o .libs/ssymv.o .libs/ssyr2k.o .libs/strmv.o .libs/isamax.o ranlib .libs/libblas.a creating libblas.la (cd .libs && rm -f libblas.la && ln -s ../libblas.la libblas.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_blas' Making all in gmx_lapack make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_lapack' /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dbdsdc.lo ../../../../src/gmxlib/gmx_lapack/dbdsdc.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetf2.lo ../../../../src/gmxlib/gmx_lapack/dgetf2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlamrg.lo ../../../../src/gmxlib/gmx_lapack/dlamrg.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarnv.lo ../../../../src/gmxlib/gmx_lapack/dlarnv.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd0.lo ../../../../src/gmxlib/gmx_lapack/dlasd0.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasda.lo ../../../../src/gmxlib/gmx_lapack/dlasda.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq6.lo ../../../../src/gmxlib/gmx_lapack/dlasq6.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgl2.lo ../../../../src/gmxlib/gmx_lapack/dorgl2.c mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarnv.c -fPIC -DPIC -o .libs/dlarnv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq6.c -fPIC -DPIC -o .libs/dlasq6.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd0.c -fPIC -DPIC -o .libs/dlasd0.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dbdsdc.c -fPIC -DPIC -o .libs/dbdsdc.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetf2.c -fPIC -DPIC -o .libs/dgetf2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlamrg.c -fPIC -DPIC -o .libs/dlamrg.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasda.c -fPIC -DPIC -o .libs/dlasda.o ../../../../src/gmxlib/gmx_lapack/dgetf2.c: In function 'dgetf2_': ../../../../src/gmxlib/gmx_lapack/dgetf2.c:17:10: warning: variable 'one' set but not used [-Wunused-but-set-variable] double one,minusone; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgl2.c -fPIC -DPIC -o .libs/dorgl2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormqr.lo ../../../../src/gmxlib/gmx_lapack/dormqr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dbdsqr.lo ../../../../src/gmxlib/gmx_lapack/dbdsqr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetrf.lo ../../../../src/gmxlib/gmx_lapack/dgetrf.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlange.lo ../../../../src/gmxlib/gmx_lapack/dlange.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd1.lo ../../../../src/gmxlib/gmx_lapack/dlasd1.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrtri.lo ../../../../src/gmxlib/gmx_lapack/dtrtri.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormqr.c -fPIC -DPIC -o .libs/dormqr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dbdsqr.c -fPIC -DPIC -o .libs/dbdsqr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetrf.c -fPIC -DPIC -o .libs/dgetrf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlange.c -fPIC -DPIC -o .libs/dlange.o ../../../../src/gmxlib/gmx_lapack/dbdsqr.c: In function 'dbdsqr_': ../../../../src/gmxlib/gmx_lapack/dbdsqr.c:61:12: warning: unused variable 'ftmp' [-Wunused-variable] double ftmp; ^ ../../../../src/gmxlib/gmx_lapack/dbdsqr.c:59:12: warning: variable 'sminlo' set but not used [-Wunused-but-set-variable] double sminlo, tolmul; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasdq.lo ../../../../src/gmxlib/gmx_lapack/dlasdq.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasr.lo ../../../../src/gmxlib/gmx_lapack/dlasr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorglq.lo ../../../../src/gmxlib/gmx_lapack/dorglq.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormtr.lo ../../../../src/gmxlib/gmx_lapack/dormtr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd1.c -fPIC -DPIC -o .libs/dlasd1.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dtrtri.c -fPIC -DPIC -o .libs/dtrtri.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgebd2.lo ../../../../src/gmxlib/gmx_lapack/dgebd2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasr.c -fPIC -DPIC -o .libs/dlasr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasdq.c -fPIC -DPIC -o .libs/dlasdq.o ../../../../src/gmxlib/gmx_lapack/dlasr.c: In function 'dlasr_': ../../../../src/gmxlib/gmx_lapack/dlasr.c:21:17: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlabrd.lo ../../../../src/gmxlib/gmx_lapack/dlabrd.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlanst.lo ../../../../src/gmxlib/gmx_lapack/dlanst.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorglq.c -fPIC -DPIC -o .libs/dorglq.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormtr.c -fPIC -DPIC -o .libs/dormtr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgebd2.c -fPIC -DPIC -o .libs/dgebd2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd2.lo ../../../../src/gmxlib/gmx_lapack/dlasd2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasdt.lo ../../../../src/gmxlib/gmx_lapack/dlasdt.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlabrd.c -fPIC -DPIC -o .libs/dlabrd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlanst.c -fPIC -DPIC -o .libs/dlanst.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasrt.lo ../../../../src/gmxlib/gmx_lapack/dlasrt.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgqr.lo ../../../../src/gmxlib/gmx_lapack/dorgqr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dstebz.lo ../../../../src/gmxlib/gmx_lapack/dstebz.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasdt.c -fPIC -DPIC -o .libs/dlasdt.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd2.c -fPIC -DPIC -o .libs/dlasd2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgebrd.lo ../../../../src/gmxlib/gmx_lapack/dgebrd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasrt.c -fPIC -DPIC -o .libs/dlasrt.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c 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-I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgebrd.c -fPIC -DPIC -o .libs/dgebrd.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlapy2.lo ../../../../src/gmxlib/gmx_lapack/dlapy2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsytrd.c -fPIC -DPIC -o .libs/dsytrd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c 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-I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlapy2.c -fPIC -DPIC -o .libs/dlapy2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorm2l.lo ../../../../src/gmxlib/gmx_lapack/dorm2l.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetrs.lo ../../../../src/gmxlib/gmx_lapack/dgetrs.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd3.c -fPIC -DPIC -o .libs/dlasd3.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dstegr.lo ../../../../src/gmxlib/gmx_lapack/dstegr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaset.c -fPIC -DPIC -o .libs/dlaset.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgelq2.lo ../../../../src/gmxlib/gmx_lapack/dgelq2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlae2.lo ../../../../src/gmxlib/gmx_lapack/dlae2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlassq.c -fPIC -DPIC -o .libs/dlassq.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorm2l.c -fPIC -DPIC -o .libs/dorm2l.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c 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x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrti2.lo ../../../../src/gmxlib/gmx_lapack/dtrti2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlae2.c -fPIC -DPIC -o .libs/dlae2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetri.lo ../../../../src/gmxlib/gmx_lapack/dgetri.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c 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-I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd6.lo ../../../../src/gmxlib/gmx_lapack/dlasd6.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq3.lo ../../../../src/gmxlib/gmx_lapack/dlasq3.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarfb.c -fPIC -DPIC -o .libs/dlarfb.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c 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../../../../src/gmxlib/gmx_lapack/dlasd7.c -fPIC -DPIC -o .libs/dlasd7.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsytd2.lo ../../../../src/gmxlib/gmx_lapack/dsytd2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgesdd.lo ../../../../src/gmxlib/gmx_lapack/dgesdd.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlagts.lo ../../../../src/gmxlib/gmx_lapack/dlagts.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq4.c -fPIC -DPIC -o .libs/dlasq4.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorg2r.c -fPIC -DPIC -o .libs/dorg2r.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarft.lo ../../../../src/gmxlib/gmx_lapack/dlarft.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsytd2.c -fPIC -DPIC -o .libs/dsytd2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgesdd.c -fPIC -DPIC -o .libs/dgesdd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormlq.c -fPIC -DPIC -o .libs/dormlq.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlascl.lo ../../../../src/gmxlib/gmx_lapack/dlascl.c ../../../../src/gmxlib/gmx_lapack/dgesdd.c: In function 'dgesdd_': ../../../../src/gmxlib/gmx_lapack/dgesdd.c:40:9: warning: variable 'wntqas' set but not used [-Wunused-but-set-variable] int wntqas, lquery; ^ ../../../../src/gmxlib/gmx_lapack/dgesdd.c:38:9: warning: variable 'minwrk' set but not used [-Wunused-but-set-variable] int minwrk, ldwrku, maxwrk, ldwkvt; ^ ../../../../src/gmxlib/gmx_lapack/dgesdd.c:35:16: warning: variable 'wntqo' set but not used [-Wunused-but-set-variable] int wntqn, wntqo, wntqs; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd8.lo ../../../../src/gmxlib/gmx_lapack/dlasd8.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlagts.c -fPIC -DPIC -o .libs/dlagts.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq5.lo ../../../../src/gmxlib/gmx_lapack/dlasq5.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarft.c -fPIC -DPIC -o .libs/dlarft.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgbr.lo ../../../../src/gmxlib/gmx_lapack/dorgbr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormql.lo ../../../../src/gmxlib/gmx_lapack/dormql.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlascl.c -fPIC -DPIC -o .libs/dlascl.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgbr.c -fPIC -DPIC -o .libs/dorgbr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaev2.lo ../../../../src/gmxlib/gmx_lapack/dlaev2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd8.c -fPIC -DPIC -o .libs/dlasd8.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsteqr.lo ../../../../src/gmxlib/gmx_lapack/dsteqr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq5.c -fPIC -DPIC -o .libs/dlasq5.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyevr.lo ../../../../src/gmxlib/gmx_lapack/dsyevr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormql.c -fPIC -DPIC -o .libs/dormql.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasrt2.lo ../../../../src/gmxlib/gmx_lapack/dlasrt2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsteqr.c -fPIC -DPIC -o .libs/dsteqr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaev2.c -fPIC -DPIC -o .libs/dlaev2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlansy.lo ../../../../src/gmxlib/gmx_lapack/dlansy.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsyevr.c -fPIC -DPIC -o .libs/dsyevr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlar1vx.lo ../../../../src/gmxlib/gmx_lapack/dlar1vx.c ../../../../src/gmxlib/gmx_lapack/dsyevr.c: In function 'dsyevr_': ../../../../src/gmxlib/gmx_lapack/dsyevr.c:36:12: warning: variable 'abstll' set but not used [-Wunused-but-set-variable] double abstll, bignum; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:33:17: warning: variable 'ieeeok' set but not used [-Wunused-but-set-variable] int iscale, ieeeok, indibl, indifl; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:21:22: warning: variable 'vuu' set but not used [-Wunused-but-set-variable] double eps, vll, vuu, tmp1; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:21:17: warning: variable 'vll' set but not used [-Wunused-but-set-variable] double eps, vll, vuu, tmp1; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrbx.lo ../../../../src/gmxlib/gmx_lapack/dlarrbx.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrex.lo ../../../../src/gmxlib/gmx_lapack/dlarrex.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrfx.lo ../../../../src/gmxlib/gmx_lapack/dlarrfx.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrvx.lo ../../../../src/gmxlib/gmx_lapack/dlarrvx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasrt2.c -fPIC -DPIC -o .libs/dlasrt2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlar1vx.c -fPIC -DPIC -o .libs/dlar1vx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlansy.c -fPIC -DPIC -o .libs/dlansy.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrbx.c -fPIC -DPIC -o .libs/dlarrbx.o ../../../../src/gmxlib/gmx_lapack/dlarrbx.c: In function 'dlarrbx_': ../../../../src/gmxlib/gmx_lapack/dlarrbx.c:36:33: warning: variable 'error' set but not used [-Wunused-but-set-variable] double right, width, dplus, error; ^ ../../../../src/gmxlib/gmx_lapack/dlarrbx.c:34:12: warning: variable 'eps' set but not used [-Wunused-but-set-variable] double eps, tmp, left; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrvx.c -fPIC -DPIC -o .libs/dlarrvx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrex.c -fPIC -DPIC -o .libs/dlarrex.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrfx.c -fPIC -DPIC -o .libs/dlarrfx.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sbdsdc.lo ../../../../src/gmxlib/gmx_lapack/sbdsdc.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetf2.lo ../../../../src/gmxlib/gmx_lapack/sgetf2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slamrg.lo ../../../../src/gmxlib/gmx_lapack/slamrg.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sbdsdc.c -fPIC -DPIC -o .libs/sbdsdc.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarnv.lo ../../../../src/gmxlib/gmx_lapack/slarnv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slamrg.c -fPIC -DPIC -o .libs/slamrg.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetf2.c -fPIC -DPIC -o .libs/sgetf2.o ../../../../src/gmxlib/gmx_lapack/sgetf2.c: In function 'sgetf2_': ../../../../src/gmxlib/gmx_lapack/sgetf2.c:17:9: warning: variable 'one' set but not used [-Wunused-but-set-variable] float one,minusone; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd0.lo ../../../../src/gmxlib/gmx_lapack/slasd0.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasda.lo ../../../../src/gmxlib/gmx_lapack/slasda.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarnv.c -fPIC -DPIC -o .libs/slarnv.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq6.lo ../../../../src/gmxlib/gmx_lapack/slasq6.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgl2.lo ../../../../src/gmxlib/gmx_lapack/sorgl2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormqr.lo ../../../../src/gmxlib/gmx_lapack/sormqr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sbdsqr.lo ../../../../src/gmxlib/gmx_lapack/sbdsqr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd0.c -fPIC -DPIC -o .libs/slasd0.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetrf.lo ../../../../src/gmxlib/gmx_lapack/sgetrf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq6.c -fPIC -DPIC -o .libs/slasq6.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasda.c -fPIC -DPIC -o .libs/slasda.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slange.lo ../../../../src/gmxlib/gmx_lapack/slange.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormqr.c -fPIC -DPIC -o .libs/sormqr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd1.lo ../../../../src/gmxlib/gmx_lapack/slasd1.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssytrd.lo ../../../../src/gmxlib/gmx_lapack/ssytrd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgl2.c -fPIC -DPIC -o .libs/sorgl2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sbdsqr.c -fPIC -DPIC -o .libs/sbdsqr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetrf.c -fPIC -DPIC -o .libs/sgetrf.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasdq.lo ../../../../src/gmxlib/gmx_lapack/slasdq.c ../../../../src/gmxlib/gmx_lapack/sbdsqr.c: In function 'sbdsqr_': ../../../../src/gmxlib/gmx_lapack/sbdsqr.c:61:11: warning: unused variable 'ftmp' [-Wunused-variable] float ftmp; ^ ../../../../src/gmxlib/gmx_lapack/sbdsqr.c:59:11: warning: variable 'sminlo' set but not used [-Wunused-but-set-variable] float sminlo, tolmul; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slange.c -fPIC -DPIC -o .libs/slange.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasr.lo ../../../../src/gmxlib/gmx_lapack/slasr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorglq.lo ../../../../src/gmxlib/gmx_lapack/sorglq.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormtr.lo ../../../../src/gmxlib/gmx_lapack/sormtr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssytrd.c -fPIC -DPIC -o .libs/ssytrd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c 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-I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgebd2.lo ../../../../src/gmxlib/gmx_lapack/sgebd2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorglq.c -fPIC -DPIC -o .libs/sorglq.o ../../../../src/gmxlib/gmx_lapack/slasr.c: In function 'slasr_': ../../../../src/gmxlib/gmx_lapack/slasr.c:21:17: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slabrd.lo ../../../../src/gmxlib/gmx_lapack/slabrd.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slanst.lo ../../../../src/gmxlib/gmx_lapack/slanst.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd2.lo ../../../../src/gmxlib/gmx_lapack/slasd2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasdt.lo ../../../../src/gmxlib/gmx_lapack/slasdt.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgebd2.c -fPIC -DPIC -o .libs/sgebd2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasrt.lo ../../../../src/gmxlib/gmx_lapack/slasrt.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slabrd.c -fPIC -DPIC -o .libs/slabrd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasdt.c -fPIC -DPIC -o .libs/slasdt.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgqr.lo ../../../../src/gmxlib/gmx_lapack/sorgqr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slanst.c -fPIC -DPIC -o .libs/slanst.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd2.c -fPIC -DPIC -o .libs/slasd2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstebz.lo ../../../../src/gmxlib/gmx_lapack/sstebz.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasrt.c -fPIC -DPIC -o .libs/slasrt.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgebrd.lo ../../../../src/gmxlib/gmx_lapack/sgebrd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstebz.c -fPIC -DPIC -o .libs/sstebz.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetrs.lo ../../../../src/gmxlib/gmx_lapack/sgetrs.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgqr.c -fPIC -DPIC -o .libs/sorgqr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgebrd.c -fPIC -DPIC -o .libs/sgebrd.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slacpy.lo ../../../../src/gmxlib/gmx_lapack/slacpy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slapy2.lo ../../../../src/gmxlib/gmx_lapack/slapy2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd3.lo ../../../../src/gmxlib/gmx_lapack/slasd3.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetrs.c -fPIC -DPIC -o .libs/sgetrs.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slacpy.c -fPIC -DPIC -o .libs/slacpy.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaset.lo ../../../../src/gmxlib/gmx_lapack/slaset.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slapy2.c -fPIC -DPIC -o .libs/slapy2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall 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x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/strtri.c -fPIC -DPIC -o .libs/strtri.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorm2r.c -fPIC -DPIC -o .libs/sorm2r.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/strti2.c -fPIC -DPIC -o .libs/strti2.o ../../../../src/gmxlib/gmx_lapack/sorm2r.c: In function 'sorm2r_': ../../../../src/gmxlib/gmx_lapack/sorm2r.c:19:42: warning: variable 'nq' set but not used [-Wunused-but-set-variable] int i__, i1, i2, i3, 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-g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarfg.lo ../../../../src/gmxlib/gmx_lapack/slarfg.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slas2.lo ../../../../src/gmxlib/gmx_lapack/slas2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd7.lo ../../../../src/gmxlib/gmx_lapack/slasd7.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgeqrf.c -fPIC -DPIC -o .libs/sgeqrf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slagtf.c -fPIC -DPIC -o .libs/slagtf.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq4.lo ../../../../src/gmxlib/gmx_lapack/slasq4.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorg2r.lo ../../../../src/gmxlib/gmx_lapack/sorg2r.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarfg.c -fPIC -DPIC -o .libs/slarfg.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slas2.c -fPIC -DPIC -o .libs/slas2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormlq.lo ../../../../src/gmxlib/gmx_lapack/sormlq.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssytd2.lo ../../../../src/gmxlib/gmx_lapack/ssytd2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd7.c -fPIC -DPIC -o .libs/slasd7.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgesdd.lo ../../../../src/gmxlib/gmx_lapack/sgesdd.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slagts.lo ../../../../src/gmxlib/gmx_lapack/slagts.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarft.lo ../../../../src/gmxlib/gmx_lapack/slarft.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq4.c -fPIC -DPIC -o .libs/slasq4.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorg2r.c -fPIC -DPIC -o .libs/sorg2r.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormlq.c -fPIC -DPIC -o .libs/sormlq.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssytd2.c -fPIC -DPIC -o .libs/ssytd2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarft.c -fPIC -DPIC -o .libs/slarft.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slagts.c -fPIC -DPIC -o .libs/slagts.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slascl.lo ../../../../src/gmxlib/gmx_lapack/slascl.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd8.lo ../../../../src/gmxlib/gmx_lapack/slasd8.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgesdd.c -fPIC -DPIC -o .libs/sgesdd.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq5.lo ../../../../src/gmxlib/gmx_lapack/slasq5.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgbr.lo ../../../../src/gmxlib/gmx_lapack/sorgbr.c ../../../../src/gmxlib/gmx_lapack/sgesdd.c: In function 'sgesdd_': ../../../../src/gmxlib/gmx_lapack/sgesdd.c:40:9: warning: variable 'wntqas' set but not used [-Wunused-but-set-variable] int wntqas, lquery; ^ ../../../../src/gmxlib/gmx_lapack/sgesdd.c:38:9: warning: variable 'minwrk' set but not used [-Wunused-but-set-variable] int minwrk, ldwrku, maxwrk, ldwkvt; ^ ../../../../src/gmxlib/gmx_lapack/sgesdd.c:35:16: warning: variable 'wntqo' set but not used [-Wunused-but-set-variable] int wntqn, wntqo, wntqs; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd8.c -fPIC -DPIC -o .libs/slasd8.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormql.lo ../../../../src/gmxlib/gmx_lapack/sormql.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slascl.c -fPIC -DPIC -o .libs/slascl.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq5.c -fPIC -DPIC -o .libs/slasq5.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgbr.c -fPIC -DPIC -o .libs/sorgbr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormql.c -fPIC -DPIC -o .libs/sormql.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaev2.lo ../../../../src/gmxlib/gmx_lapack/slaev2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssteqr.lo ../../../../src/gmxlib/gmx_lapack/ssteqr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyevr.lo ../../../../src/gmxlib/gmx_lapack/ssyevr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasrt2.lo ../../../../src/gmxlib/gmx_lapack/slasrt2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slansy.lo ../../../../src/gmxlib/gmx_lapack/slansy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slar1vx.lo ../../../../src/gmxlib/gmx_lapack/slar1vx.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrbx.lo ../../../../src/gmxlib/gmx_lapack/slarrbx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaev2.c -fPIC -DPIC -o .libs/slaev2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssyevr.c -fPIC -DPIC -o .libs/ssyevr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssteqr.c -fPIC -DPIC -o .libs/ssteqr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasrt2.c -fPIC -DPIC -o .libs/slasrt2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slansy.c -fPIC -DPIC -o .libs/slansy.o ../../../../src/gmxlib/gmx_lapack/ssyevr.c: In function 'ssyevr_': ../../../../src/gmxlib/gmx_lapack/ssyevr.c:36:11: warning: variable 'abstll' set but not used [-Wunused-but-set-variable] float abstll, bignum; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:33:17: warning: variable 'ieeeok' set but not used [-Wunused-but-set-variable] int iscale, ieeeok, indibl, indifl; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:21:21: warning: variable 'vuu' set but not used [-Wunused-but-set-variable] float eps, vll, vuu, tmp1; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:21:16: warning: variable 'vll' set but not used [-Wunused-but-set-variable] float eps, vll, vuu, tmp1; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrex.lo ../../../../src/gmxlib/gmx_lapack/slarrex.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slar1vx.c -fPIC -DPIC -o .libs/slar1vx.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrfx.lo ../../../../src/gmxlib/gmx_lapack/slarrfx.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrvx.lo ../../../../src/gmxlib/gmx_lapack/slarrvx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrbx.c -fPIC -DPIC -o .libs/slarrbx.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ilasrt2.lo ../../../../src/gmxlib/gmx_lapack/ilasrt2.c ../../../../src/gmxlib/gmx_lapack/slarrbx.c: In function 'slarrbx_': ../../../../src/gmxlib/gmx_lapack/slarrbx.c:36:32: warning: variable 'error' set but not used [-Wunused-but-set-variable] float right, width, dplus, error; ^ ../../../../src/gmxlib/gmx_lapack/slarrbx.c:34:11: warning: variable 'eps' set but not used [-Wunused-but-set-variable] float eps, tmp, left; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrex.c -fPIC -DPIC -o .libs/slarrex.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrvx.c -fPIC -DPIC -o .libs/slarrvx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrfx.c -fPIC -DPIC -o .libs/slarrfx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ilasrt2.c -fPIC -DPIC -o .libs/ilasrt2.o /bin/sh ../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o liblapack.la dbdsdc.lo dgetf2.lo dlamrg.lo dlarnv.lo dlasd0.lo dlasda.lo dlasq6.lo dorgl2.lo dormqr.lo dbdsqr.lo dgetrf.lo dlange.lo dlasd1.lo dtrtri.lo dlasdq.lo dlasr.lo dorglq.lo dormtr.lo dgebd2.lo dlabrd.lo dlanst.lo dlasd2.lo dlasdt.lo dlasrt.lo dorgqr.lo dstebz.lo dgebrd.lo dsytrd.lo dlacpy.lo dlapy2.lo dlasd3.lo dlaset.lo dlassq.lo dorm2l.lo dgetrs.lo dstegr.lo dgelq2.lo dlae2.lo dlasd4.lo dlasq1.lo dtrti2.lo dgetri.lo dlasv2.lo dorm2r.lo dstein.lo dgelqf.lo dlaebz.lo dlarf.lo dlartg.lo dlasd5.lo dlasq2.lo dlaswp.lo dormbr.lo dsterf.lo dgeqr2.lo dlaed6.lo dlarfb.lo dlaruv.lo dlasd6.lo dlasq3.lo dlatrd.lo dorml2.lo dstevr.lo dgeqrf.lo dlagtf.lo dlarfg.lo dlas2.lo dlasd7.lo dlasq4.lo dorg2r.lo dormlq.lo dsytd2.lo dgesdd.lo dlagts.lo dlarft.lo dlascl.lo dlasd8.lo dlasq5.lo dorgbr.lo dormql.lo dlaev2.lo dsteqr.lo dsyevr.lo dlasrt2.lo dlansy.lo dlar1vx.lo dlarrbx.lo dlarrex.lo dlarrfx.lo dlarrvx.lo sbdsdc.lo sgetf2.lo slamrg.lo slarnv.lo slasd0.lo slasda.lo slasq6.lo sorgl2.lo sormqr.lo sbdsqr.lo sgetrf.lo slange.lo slasd1.lo ssytrd.lo slasdq.lo slasr.lo sorglq.lo sormtr.lo sgebd2.lo slabrd.lo slanst.lo slasd2.lo slasdt.lo slasrt.lo sorgqr.lo sstebz.lo sgebrd.lo sgetrs.lo slacpy.lo slapy2.lo slasd3.lo slaset.lo slassq.lo sorm2l.lo sgetri.lo sstegr.lo sgelq2.lo slae2.lo slasd4.lo slasq1.lo strti2.lo strtri.lo slasv2.lo sorm2r.lo sstein.lo sgelqf.lo slaebz.lo slarf.lo slartg.lo slasd5.lo slasq2.lo slaswp.lo sormbr.lo ssterf.lo sgeqr2.lo slaed6.lo slarfb.lo slaruv.lo slasd6.lo slasq3.lo slatrd.lo sorml2.lo sstevr.lo sgeqrf.lo slagtf.lo slarfg.lo slas2.lo slasd7.lo slasq4.lo sorg2r.lo sormlq.lo ssytd2.lo sgesdd.lo slagts.lo slarft.lo slascl.lo slasd8.lo slasq5.lo sorgbr.lo sormql.lo slaev2.lo ssteqr.lo ssyevr.lo slasrt2.lo slansy.lo slar1vx.lo slarrbx.lo slarrex.lo slarrfx.lo slarrvx.lo ilasrt2.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/liblapack.a .libs/dbdsdc.o .libs/dgetf2.o .libs/dlamrg.o .libs/dlarnv.o .libs/dlasd0.o .libs/dlasda.o .libs/dlasq6.o .libs/dorgl2.o .libs/dormqr.o .libs/dbdsqr.o .libs/dgetrf.o .libs/dlange.o .libs/dlasd1.o .libs/dtrtri.o .libs/dlasdq.o .libs/dlasr.o .libs/dorglq.o .libs/dormtr.o .libs/dgebd2.o .libs/dlabrd.o .libs/dlanst.o .libs/dlasd2.o .libs/dlasdt.o .libs/dlasrt.o .libs/dorgqr.o .libs/dstebz.o .libs/dgebrd.o .libs/dsytrd.o .libs/dlacpy.o .libs/dlapy2.o .libs/dlasd3.o .libs/dlaset.o .libs/dlassq.o .libs/dorm2l.o .libs/dgetrs.o .libs/dstegr.o .libs/dgelq2.o .libs/dlae2.o .libs/dlasd4.o .libs/dlasq1.o .libs/dtrti2.o .libs/dgetri.o .libs/dlasv2.o .libs/dorm2r.o .libs/dstein.o .libs/dgelqf.o .libs/dlaebz.o .libs/dlarf.o .libs/dlartg.o .libs/dlasd5.o .libs/dlasq2.o .libs/dlaswp.o .libs/dormbr.o .libs/dsterf.o .libs/dgeqr2.o .libs/dlaed6.o .libs/dlarfb.o .libs/dlaruv.o .libs/dlasd6.o .libs/dlasq3.o .libs/dlatrd.o .libs/dorml2.o .libs/dstevr.o .libs/dgeqrf.o .libs/dlagtf.o .libs/dlarfg.o .libs/dlas2.o .libs/dlasd7.o .libs/dlasq4.o .libs/dorg2r.o .libs/dormlq.o .libs/dsytd2.o .libs/dgesdd.o .libs/dlagts.o .libs/dlarft.o .libs/dlascl.o .libs/dlasd8.o .libs/dlasq5.o .libs/dorgbr.o .libs/dormql.o .libs/dlaev2.o .libs/dsteqr.o .libs/dsyevr.o .libs/dlasrt2.o .libs/dlansy.o .libs/dlar1vx.o .libs/dlarrbx.o .libs/dlarrex.o .libs/dlarrfx.o .libs/dlarrvx.o .libs/sbdsdc.o .libs/sgetf2.o .libs/slamrg.o .libs/slarnv.o .libs/slasd0.o .libs/slasda.o .libs/slasq6.o .libs/sorgl2.o .libs/sormqr.o .libs/sbdsqr.o .libs/sgetrf.o .libs/slange.o .libs/slasd1.o .libs/ssytrd.o .libs/slasdq.o .libs/slasr.o .libs/sorglq.o .libs/sormtr.o .libs/sgebd2.o .libs/slabrd.o .libs/slanst.o .libs/slasd2.o .libs/slasdt.o .libs/slasrt.o .libs/sorgqr.o .libs/sstebz.o .libs/sgebrd.o .libs/sgetrs.o .libs/slacpy.o .libs/slapy2.o .libs/slasd3.o .libs/slaset.o .libs/slassq.o .libs/sorm2l.o .libs/sgetri.o .libs/sstegr.o .libs/sgelq2.o .libs/slae2.o .libs/slasd4.o .libs/slasq1.o .libs/strti2.o .libs/strtri.o .libs/slasv2.o .libs/sorm2r.o .libs/sstein.o .libs/sgelqf.o .libs/slaebz.o .libs/slarf.o .libs/slartg.o .libs/slasd5.o .libs/slasq2.o .libs/slaswp.o .libs/sormbr.o .libs/ssterf.o .libs/sgeqr2.o .libs/slaed6.o .libs/slarfb.o .libs/slaruv.o .libs/slasd6.o .libs/slasq3.o .libs/slatrd.o .libs/sorml2.o .libs/sstevr.o .libs/sgeqrf.o .libs/slagtf.o .libs/slarfg.o .libs/slas2.o .libs/slasd7.o .libs/slasq4.o .libs/sorg2r.o .libs/sormlq.o .libs/ssytd2.o .libs/sgesdd.o .libs/slagts.o .libs/slarft.o .libs/slascl.o .libs/slasd8.o .libs/slasq5.o .libs/sorgbr.o .libs/sormql.o .libs/slaev2.o .libs/ssteqr.o .libs/ssyevr.o .libs/slasrt2.o .libs/slansy.o .libs/slar1vx.o .libs/slarrbx.o .libs/slarrex.o .libs/slarrfx.o .libs/slarrvx.o .libs/ilasrt2.o ranlib .libs/liblapack.a creating liblapack.la (cd .libs && rm -f liblapack.la && ln -s ../liblapack.la liblapack.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_lapack' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o 3dview.lo ../../../src/gmxlib/3dview.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o atomprop.lo ../../../src/gmxlib/atomprop.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o bondfree.lo ../../../src/gmxlib/bondfree.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcgrid.lo ../../../src/gmxlib/calcgrid.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calch.lo ../../../src/gmxlib/calch.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o checkpoint.lo ../../../src/gmxlib/checkpoint.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o confio.lo ../../../src/gmxlib/confio.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o copyrite.lo ../../../src/gmxlib/copyrite.c mkdir .libs mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/bondfree.c -fPIC -DPIC -o .libs/bondfree.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/3dview.c -fPIC -DPIC -o .libs/3dview.o mkdir: cannot create directory '.libs': File exists x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/calch.c -fPIC -DPIC -o .libs/calch.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/checkpoint.c -fPIC -DPIC -o .libs/checkpoint.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/confio.c -fPIC -DPIC -o .libs/confio.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/copyrite.c -fPIC -DPIC -o .libs/copyrite.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/calcgrid.c -fPIC -DPIC -o .libs/calcgrid.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/atomprop.c -fPIC -DPIC -o .libs/atomprop.o ../../../src/gmxlib/calch.c: In function 'gen_waterhydrogen': ../../../src/gmxlib/calch.c:81:14: warning: unused variable 'kkk' [-Wunused-variable] rvec kkk; ^ In file included from ../../../src/gmxlib/calch.c:42:0: ../../../src/gmxlib/calch.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/calch.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/bondfree.c: In function 'FENE_bonds': ../../../src/gmxlib/bondfree.c:220:9: warning: unused variable 'dr' [-Wunused-variable] real dr,dr2,bm2,omdr2obm2,fbond,vbond,fij,vtot; ^ ../../../src/gmxlib/bondfree.c: In function 'do_1_thole': ../../../src/gmxlib/bondfree.c:534:20: warning: unused variable 'r12n' [-Wunused-variable] real r12sq,r12_1,r12n,r12bar,v0,v1,fscal,ebar,fff; ^ ../../../src/gmxlib/bondfree.c: In function 'posres': ../../../src/gmxlib/bondfree.c:1136:19: warning: unused variable 'fc' [-Wunused-variable] real v,vtot,fm,*fc; ^ ../../../src/gmxlib/bondfree.c:1134:22: warning: unused variable 'ki' [-Wunused-variable] int i,ai,m,d,type,ki,npbcdim=0; ^ ../../../src/gmxlib/bondfree.c: In function 'cross_bond_angle': ../../../src/gmxlib/bondfree.c:1687:32: warning: variable 't3' set but not used [-Wunused-but-set-variable] int i,ai,aj,ak,type,m,t1,t2,t3; ^ ../../../src/gmxlib/bondfree.c: In function 'bonded_tab': ../../../src/gmxlib/bondfree.c:1762:10: warning: unused variable 'f' [-Wunused-variable] real v,f,dvdl; ^ ../../../src/gmxlib/bondfree.c:1762:8: warning: unused variable 'v' [-Wunused-variable] real v,f,dvdl; ^ ../../../src/gmxlib/bondfree.c: In function 'tab_angles': ../../../src/gmxlib/bondfree.c:1887:12: warning: unused variable 'snt' [-Wunused-variable] real snt,st,sth; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/bondfree.c:42: ../../../src/gmxlib/bondfree.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/bondfree.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/bondfree.c:56:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/gmxlib/copyrite.c: In function 'cool_quote': ../../../src/gmxlib/copyrite.c:181:9: warning: unused variable 's' [-Wunused-variable] char *s,*ptr; ^ In file included from ../../../src/gmxlib/atomprop.c:45:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/atomprop.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/copyrite.c: In function 'please_cite': ../../../src/gmxlib/copyrite.c:469:8: warning: unused variable 'j' [-Wunused-variable] int j,index; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/copyrite.c:53: ../../../src/gmxlib/copyrite.c: At top level: ../../../src/gmxlib/confio.c: In function 'read_espresso_conf': ../../../src/gmxlib/confio.c:448:21: warning: unused variable 'npar' [-Wunused-variable] int natoms,level,npar,r,nprop,p,i,m; ^ ../../../src/gmxlib/confio.c:448:8: warning: unused variable 'natoms' [-Wunused-variable] int natoms,level,npar,r,nprop,p,i,m; ^ ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/confio.c: In function 'read_stx_conf': ../../../src/gmxlib/confio.c:1298:14: warning: unused variable 'd' [-Wunused-variable] real d,r1,r2; ^ ../../../src/gmxlib/confio.c:1293:14: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/confio.c:49: ../../../src/gmxlib/confio.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/confio.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/confio.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/gmxlib/confio.c:57:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/confio.c:59: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/confio.c:864:13: warning: 'get_conf' defined but not used [-Wunused-function] static void get_conf(FILE *in, char *title, int *natoms, ^ ../../../src/gmxlib/3dview.c: In function 'reset_view': /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o disre.lo ../../../src/gmxlib/disre.c ../../../src/gmxlib/3dview.c:282:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/3dview.c:47: ../../../src/gmxlib/3dview.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/3dview.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/calcgrid.c: In function 'calc_grid': ../../../src/gmxlib/calcgrid.c:89:8: warning: unused variable 'tmp' [-Wunused-variable] real tmp[3]; ^ ../../../src/gmxlib/calcgrid.c:86:10: warning: unused variable 'j' [-Wunused-variable] int i,j,nmin[DIM]; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpte_ints': ../../../src/gmxlib/checkpoint.c:305:16: warning: unused variable 'i' [-Wunused-variable] int nf,dt,i; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpte_doubles': ../../../src/gmxlib/checkpoint.c:371:16: warning: unused variable 'i' [-Wunused-variable] int nf,dt,i; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpt_header': ../../../src/gmxlib/checkpoint.c:534:10: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/checkpoint.c: In function 'write_checkpoint': ../../../src/gmxlib/checkpoint.c:837:30: warning: unused variable 'i' [-Wunused-variable] int flags_eks,flags_enh,i; ^ ../../../src/gmxlib/checkpoint.c:833:29: warning: unused variable 'flag_64bit' [-Wunused-variable] int nppnodes,npmenodes,flag_64bit; ^ ../../../src/gmxlib/checkpoint.c: In function 'read_checkpoint': ../../../src/gmxlib/checkpoint.c:1254:40: warning: left-hand operand of comma expression has no effect [-Wunused-value] if (outputfiles[i].filename,outputfiles[i].offset < 0) ^ ../../../src/gmxlib/checkpoint.c:1036:7: warning: unused variable 'filename' [-Wunused-variable] char filename[STRLEN]; ^ ../../../src/gmxlib/checkpoint.c:1033:15: warning: unused variable 'j' [-Wunused-variable] int fp,i,j; ^ ../../../src/gmxlib/checkpoint.c: In function 'list_checkpoint': ../../../src/gmxlib/checkpoint.c:1421:12: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/checkpoint.c:1421:10: warning: unused variable 'i' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/checkpoint.c:1420:10: warning: unused variable 'indent' [-Wunused-variable] int indent; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/checkpoint.c:32: ../../../src/gmxlib/checkpoint.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/checkpoint.c:34: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/checkpoint.c:34:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/disre.c -fPIC -DPIC -o .libs/disre.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_fit.lo ../../../src/gmxlib/do_fit.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o enxio.lo ../../../src/gmxlib/enxio.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ewald_util.lo ../../../src/gmxlib/ewald_util.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fatal.lo ../../../src/gmxlib/gmx_fatal.c ../../../src/gmxlib/disre.c: In function 'init_disres': ../../../src/gmxlib/disre.c:62:19: warning: variable 'ip' set but not used [-Wunused-but-set-variable] t_iparams *ip; ^ ../../../src/gmxlib/disre.c:61:26: warning: unused variable 'i' [-Wunused-variable] int fa,nmol,i,npair,np; ^ ../../../src/gmxlib/disre.c: In function 'calc_disres_R_6': ../../../src/gmxlib/disre.c:217:23: warning: unused variable 'dt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:217:20: warning: unused variable 'jt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:217:17: warning: unused variable 'it' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:212:37: warning: unused variable 'm' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:34: warning: unused variable 'kj' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:31: warning: unused variable 'ki' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:24: warning: unused variable 'i' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c: In function 'ta_disres': ../../../src/gmxlib/disre.c:338:20: warning: unused variable 'jt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:338:17: warning: unused variable 'it' [-Wunused-variable] ivec it,jt,dt; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/disre.c:47: ../../../src/gmxlib/disre.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/disre.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/disre.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/enxio.c -fPIC -DPIC -o .libs/enxio.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/do_fit.c -fPIC -DPIC -o .libs/do_fit.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ewald_util.c -fPIC -DPIC -o .libs/ewald_util.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ffscanf.lo ../../../src/gmxlib/ffscanf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_fatal.c -fPIC -DPIC -o .libs/gmx_fatal.o ../../../src/gmxlib/enxio.c: In function 'empty_file': ../../../src/gmxlib/enxio.c:220:8: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret; ^ ../../../src/gmxlib/enxio.c: In function 'get_enx_state': ../../../src/gmxlib/enxio.c:443:16: warning: unused variable 'pcouplmu_nm' [-Wunused-variable] static char *pcouplmu_nm[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/enxio.c:46: ../../../src/gmxlib/enxio.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/enxio.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ffscanf.c -fPIC -DPIC -o .libs/ffscanf.o ../../../src/gmxlib/do_fit.c: In function 'calc_fit_R': ../../../src/gmxlib/do_fit.c:103:18: warning: unused variable 'm' [-Wunused-variable] int c,r,n,j,m,i,irot,s; ^ ../../../src/gmxlib/do_fit.c: In function 'do_fit_ndim': ../../../src/gmxlib/do_fit.c:214:10: warning: unused variable 'i' [-Wunused-variable] int i,j,m,r,c; ^ In file included from ../../../src/gmxlib/do_fit.c:40:0: ../../../src/gmxlib/do_fit.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/do_fit.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/gmx_fatal.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/gmx_fatal.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/gmx_fatal.c:115:13: warning: 'bputi' defined but not used [-Wunused-function] static void bputi(char *msg,int *len,int val,int radix,int fld,bool bNeg) ^ ../../../src/gmxlib/gmx_fatal.c:226:13: warning: 'fatal_error' defined but not used [-Wunused-function] static void fatal_error(int f_errno,const char *fmt,...) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o filenm.lo ../../../src/gmxlib/filenm.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/filenm.c -fPIC -DPIC -o .libs/filenm.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/ewald_util.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/ewald_util.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o futil.lo ../../../src/gmxlib/futil.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gbutil.lo ../../../src/gmxlib/gbutil.c ../../../src/gmxlib/filenm.c: In function 'add_suffix_to_output_names': ../../../src/gmxlib/filenm.c:811:12: warning: unused variable 'pos' [-Wunused-variable] int i,j,pos; ^ In file included from ../../../include/wman.h:44:0, from ../../../src/gmxlib/filenm.c:48: ../../../src/gmxlib/filenm.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/futil.c -fPIC -DPIC -o .libs/futil.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxfio.lo ../../../src/gmxlib/gmxfio.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gbutil.c -fPIC -DPIC -o .libs/gbutil.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ifunc.lo ../../../src/gmxlib/ifunc.c ../../../src/gmxlib/futil.c: In function 'ffopen': ../../../src/gmxlib/futil.c:287:18: warning: unused variable 'bf' [-Wunused-variable] char buf[256],*bf,*bufsize=0,*ptr; ^ ../../../src/gmxlib/futil.c: In function 'get_libdir': ../../../src/gmxlib/futil.c:397:22: warning: variable 'pdum' set but not used [-Wunused-but-set-variable] char *dir,*ptr,*s,*pdum; ^ ../../../src/gmxlib/futil.c:395:8: warning: unused variable 'test_file' [-Wunused-variable] char test_file[MAX_PATHBUF]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/futil.c:53: ../../../src/gmxlib/futil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/gbutil.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/gbutil.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/gbutil.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmxfio.c -fPIC -DPIC -o .libs/gmxfio.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ifunc.c -fPIC -DPIC -o .libs/ifunc.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o index.lo ../../../src/gmxlib/index.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o cinvsqrtdata.lo ../../../src/gmxlib/cinvsqrtdata.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o invblock.lo ../../../src/gmxlib/invblock.c ../../../src/gmxlib/gmxfio.c: In function 'gmx_fio_fopen': ../../../src/gmxlib/gmxfio.c:803:8: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/gmxlib/gmxfio.c: In function 'gmx_fio_get_output_file_positions': ../../../src/gmxlib/gmxfio.c:885:27: warning: unused variable 'pos' [-Wunused-variable] long pos; ^ ../../../src/gmxlib/gmxfio.c:884:34: warning: unused variable 'pos_lo' [-Wunused-variable] int pos_hi,pos_lo; ^ ../../../src/gmxlib/gmxfio.c:884:27: warning: unused variable 'pos_hi' [-Wunused-variable] int pos_hi,pos_lo; ^ ../../../src/gmxlib/gmxfio.c:883:36: warning: unused variable 'rc' [-Wunused-variable] int i,nfiles,rc,nalloc; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/index.c -fPIC -DPIC -o .libs/index.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/cinvsqrtdata.c -fPIC -DPIC -o .libs/cinvsqrtdata.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o macros.lo ../../../src/gmxlib/macros.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/invblock.c -fPIC -DPIC -o .libs/invblock.o ../../../src/gmxlib/index.c: In function 'analyse_prot': ../../../src/gmxlib/index.c:298:15: warning: unused variable 'nnpres' [-Wunused-variable] int nra,nnpres,npres; ^ ../../../src/gmxlib/index.c: In function 'init_index': ../../../src/gmxlib/index.c:532:19: warning: variable 'nread' set but not used [-Wunused-but-set-variable] int i,j,ng,nread; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/index.c:48: ../../../src/gmxlib/index.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/index.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o orires.lo ../../../src/gmxlib/orires.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/macros.c -fPIC -DPIC -o .libs/macros.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sparsematrix.lo ../../../src/gmxlib/sparsematrix.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o main.lo ../../../src/gmxlib/main.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/orires.c -fPIC -DPIC -o .libs/orires.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o maths.lo ../../../src/gmxlib/maths.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/sparsematrix.c -fPIC -DPIC -o .libs/sparsematrix.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/main.c -fPIC -DPIC -o .libs/main.o ../../../src/gmxlib/orires.c: In function 'init_orires': ../../../src/gmxlib/orires.c:59:26: warning: unused variable 'nr' [-Wunused-variable] int i,j,d,ex,nmol,nr,*nr_ex; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/orires.c:43: ../../../src/gmxlib/orires.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/orires.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/orires.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/maths.c -fPIC -DPIC -o .libs/maths.o In file included from ../../../src/gmxlib/maths.c:43:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o matio.lo ../../../src/gmxlib/matio.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mshift.lo ../../../src/gmxlib/mshift.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mtop_util.lo ../../../src/gmxlib/mtop_util.c ../../../src/gmxlib/main.c: In function 'par_fn': ../../../src/gmxlib/main.c:68:7: warning: unused variable 'n' [-Wunused-variable] int n; ^ ../../../src/gmxlib/main.c: In function 'gmx_log_open': ../../../src/gmxlib/main.c:124:12: warning: unused variable 'testlen' [-Wunused-variable] int len,testlen,pid; ^ ../../../src/gmxlib/main.c: In function 'init_multisystem': ../../../src/gmxlib/main.c:235:8: warning: unused variable 'rank' [-Wunused-variable] int *rank; ^ ../../../src/gmxlib/main.c: In function 'init_par': /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mtxio.lo ../../../src/gmxlib/mtxio.c ../../../src/gmxlib/main.c:309:13: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/main.c:308:15: warning: variable 'argv' set but not used [-Wunused-but-set-variable] char **argv; ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/gmxlib/main.c:52: ../../../src/gmxlib/main.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/gmxlib/main.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/gmxlib/main.c:52: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mvdata.lo ../../../src/gmxlib/mvdata.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/matio.c -fPIC -DPIC -o .libs/matio.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mshift.c -fPIC -DPIC -o .libs/mshift.o ../../../src/gmxlib/matio.c: In function 'write_xpm_map_split': ../../../src/gmxlib/matio.c:636:16: warning: unused variable 'fac' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:14: warning: unused variable 'b' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:12: warning: unused variable 'g' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:10: warning: unused variable 'r' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:635:10: warning: unused variable 'i' [-Wunused-variable] int i,ntot; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/matio.c:48: ../../../src/gmxlib/matio.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/matio.c:50:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mtxio.c -fPIC -DPIC -o .libs/mtxio.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mtop_util.c -fPIC -DPIC -o .libs/mtop_util.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mvdata.c -fPIC -DPIC -o .libs/mvdata.o ../../../src/gmxlib/mshift.c: In function 'compact_graph': ../../../src/gmxlib/mshift.c:243:12: warning: unused variable 'e' [-Wunused-variable] atom_id *e; ^ ../../../src/gmxlib/mshift.c:242:9: warning: unused variable 'j' [-Wunused-variable] int i,j,n,max_nedge; ^ ../../../src/gmxlib/mshift.c: In function 'mk_graph_ilist': ../../../src/gmxlib/mshift.c:307:13: warning: variable 'nbtot' set but not used [-Wunused-but-set-variable] int i,nbtot; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/mshift.c:44: ../../../src/gmxlib/mshift.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/mshift.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/mshift.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/mtxio.c: In function 'gmx_mtxio_write': ../../../src/gmxlib/mtxio.c:90:13: warning: variable 'xd' set but not used [-Wunused-but-set-variable] XDR * xd; ^ ../../../src/gmxlib/mtxio.c: In function 'gmx_mtxio_read': ../../../src/gmxlib/mtxio.c:164:13: warning: variable 'xd' set but not used [-Wunused-but-set-variable] XDR * xd; ^ In file included from ../../../src/gmxlib/mtxio.c:48:0: ../../../src/gmxlib/mtxio.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_atomnr_to_molblock_ind': ../../../src/gmxlib/mtop_util.c:105:14: warning: unused variable 'atoms' [-Wunused-variable] t_atoms *atoms; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_atominfo_global': ../../../src/gmxlib/mtop_util.c:132:21: warning: unused variable 'molb' [-Wunused-variable] gmx_molblock_t *molb; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_ilistloop_all_next': ../../../src/gmxlib/mtop_util.c:384:21: warning: unused variable 'molb' [-Wunused-variable] gmx_molblock_t *molb; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_global_cgs': ../../../src/gmxlib/mtop_util.c:438:14: warning: unused variable 'atoms' [-Wunused-variable] t_atoms *atoms; ^ ../../../src/gmxlib/mtop_util.c: In function 'gen_local_top': ../../../src/gmxlib/mtop_util.c:669:31: warning: unused variable 'mt' [-Wunused-variable] int mb,srcnr,destnr,ftype,mt,natoms,nposre_old; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_atoms': ../../../src/gmxlib/mvdata.c:147:7: warning: unused variable 'dummy' [-Wunused-variable] int dummy; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_groups': ../../../src/gmxlib/mvdata.c:162:7: warning: unused variable 'dummy' [-Wunused-variable] int dummy; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_ffparams': ../../../src/gmxlib/mvdata.c:290:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_molblock': ../../../src/gmxlib/mvdata.c:427:8: warning: unused variable 'bAlloc' [-Wunused-variable] bool bAlloc=TRUE; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/mvdata.c:50: ../../../src/gmxlib/mvdata.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/mvdata.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/mvdata.c:275:13: warning: 'bc_idef' defined but not used [-Wunused-function] static void bc_idef(const t_commrec *cr,t_idef *idef) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o names.lo ../../../src/gmxlib/names.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o network.lo ../../../src/gmxlib/network.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrama.lo ../../../src/gmxlib/nrama.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrjac.lo ../../../src/gmxlib/nrjac.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/names.c -fPIC -DPIC -o .libs/names.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/network.c -fPIC -DPIC -o .libs/network.o ../../../src/gmxlib/network.c: In function 'gmx_mpi_initialized': ../../../src/gmxlib/network.c:57:7: warning: unused variable 'n' [-Wunused-variable] int n; ^ ../../../src/gmxlib/network.c: In function 'gmx_setup_nodecomm': ../../../src/gmxlib/network.c:245:40: warning: unused variable 'ni' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:37: warning: unused variable 'ng' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:35: warning: unused variable 'j' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:33: warning: unused variable 'i' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:25: warning: unused variable 'hostnum' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:15: warning: unused variable 'resultlen' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:10: warning: unused variable 'rank' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:8: warning: unused variable 'n' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c: In function 'gmx_finalize': ../../../src/gmxlib/network.c:522:7: warning: unused variable 'ret' [-Wunused-variable] int ret; ^ In file included from ../../../src/gmxlib/network.c:45:0: ../../../src/gmxlib/network.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/network.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrama.c -fPIC -DPIC -o .libs/nrama.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrnb.lo ../../../src/gmxlib/nrnb.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pargs.lo ../../../src/gmxlib/pargs.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrjac.c -fPIC -DPIC -o .libs/nrjac.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/nrjac.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrnb.c -fPIC -DPIC -o .libs/nrnb.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pbc.lo ../../../src/gmxlib/pbc.c In file included from ../../../src/gmxlib/nrnb.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/nrama.c: In function 'get_dih2': ../../../src/gmxlib/nrama.c:179:11: warning: unused variable 'found' [-Wunused-variable] int found,**ff,thisff[NPP]; ^ ../../../src/gmxlib/nrama.c: In function 'init_rama': ../../../src/gmxlib/nrama.c:307:10: warning: unused variable 'ePBC' [-Wunused-variable] int ePBC; ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/nrama.h:45, from ../../../src/gmxlib/nrama.c:49: ../../../src/gmxlib/nrama.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/nrama.c:176:13: warning: 'get_dih2' defined but not used [-Wunused-function] static void get_dih2(t_xrama *xr,t_functype functype[], ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pargs.c -fPIC -DPIC -o .libs/pargs.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdbio.lo ../../../src/gmxlib/pdbio.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o princ.lo ../../../src/gmxlib/princ.c ../../../src/gmxlib/pargs.c: In function 'print_pargs': ../../../src/gmxlib/pargs.c:306:26: warning: unused variable 'tmp' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ ../../../src/gmxlib/pargs.c:306:16: warning: unused variable 'buf2' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ ../../../src/gmxlib/pargs.c:306:8: warning: unused variable 'buf' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pargs.c:51: ../../../src/gmxlib/pargs.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pargs.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pbc.c -fPIC -DPIC -o .libs/pbc.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rando.lo ../../../src/gmxlib/rando.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pdbio.c -fPIC -DPIC -o .libs/pdbio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o random.lo ../../../src/gmxlib/random.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/princ.c -fPIC -DPIC -o .libs/princ.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pdbio.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pdbio.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/pdbio.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/princ.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/princ.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/princ.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/princ.c:48:13: warning: 'm_op' defined but not used [-Wunused-function] static void m_op(matrix mat,rvec x) ^ ../../../src/gmxlib/princ.c:249:13: warning: 'dump_shit' defined but not used [-Wunused-function] static void dump_shit(FILE *out,matrix trans,rvec prcomp,real totmass) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rando.c -fPIC -DPIC -o .libs/rando.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_random.lo ../../../src/gmxlib/gmx_random.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/random.c -fPIC -DPIC -o .libs/random.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rbin.lo ../../../src/gmxlib/rbin.c ../../../src/gmxlib/pbc.c: In function 'low_set_pbc': ../../../src/gmxlib/pbc.c:272:8: warning: unused variable 'bXY' [-Wunused-variable] bool bXY,bUse; ^ ../../../src/gmxlib/pbc.c: In function 'put_atom_in_box': ../../../src/gmxlib/pbc.c:1300:7: warning: unused variable 'i' [-Wunused-variable] int i,m,d; ^ ../../../src/gmxlib/pbc.c: In function 'put_atoms_in_box': ../../../src/gmxlib/pbc.c:1314:11: warning: unused variable 'd' [-Wunused-variable] int i,m,d; ^ ../../../src/gmxlib/pbc.c:1314:9: warning: unused variable 'm' [-Wunused-variable] int i,m,d; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pbc.c:43: ../../../src/gmxlib/pbc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pbc.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/random.c: In function 'maxwell_speed': ../../../src/gmxlib/random.c:94:11: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/random.c:93:12: warning: unused variable 'dummy' [-Wunused-variable] atom_id *dummy; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/random.c:45: ../../../src/gmxlib/random.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/random.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readinp.lo ../../../src/gmxlib/readinp.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_random.c -fPIC -DPIC -o .libs/gmx_random.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o replace.lo ../../../src/gmxlib/replace.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rmpbc.lo ../../../src/gmxlib/rmpbc.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rbin.c -fPIC -DPIC -o .libs/rbin.o ../../../src/gmxlib/gmx_random.c: In function 'gmx_rng_make_seed': ../../../src/gmxlib/gmx_random.c:146:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret; ^ ../../../src/gmxlib/gmx_random.c: In function 'gmx_rng_update': ../../../src/gmxlib/gmx_random.c:168:7: warning: variable 'mti' set but not used [-Wunused-but-set-variable] int mti,k; ^ ../../../src/gmxlib/gmx_random.c:167:16: warning: unused variable 'lastx' [-Wunused-variable] unsigned int lastx,x1,x2,y,*mt; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/readinp.c -fPIC -DPIC -o .libs/readinp.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/replace.c -fPIC -DPIC -o .libs/replace.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shift_util.lo ../../../src/gmxlib/shift_util.c In file included from ../../../src/gmxlib/readinp.c:46:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sortwater.lo ../../../src/gmxlib/sortwater.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rmpbc.c -fPIC -DPIC -o .libs/rmpbc.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/rmpbc.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/rmpbc.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/rmpbc.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/sortwater.c -fPIC -DPIC -o .libs/sortwater.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o smalloc.lo ../../../src/gmxlib/smalloc.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o statutil.lo ../../../src/gmxlib/statutil.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/shift_util.c -fPIC -DPIC -o .libs/shift_util.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/sortwater.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/sortwater.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/statutil.c -fPIC -DPIC -o .libs/statutil.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/smalloc.c -fPIC -DPIC -o .libs/smalloc.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strdb.lo ../../../src/gmxlib/strdb.c ../../../src/gmxlib/statutil.c: In function 'check_times2': ../../../src/gmxlib/statutil.c:152:8: warning: variable 'margin' set but not used [-Wunused-but-set-variable] real margin; ^ ../../../src/gmxlib/statutil.c: In function 'parse_common_args': ../../../src/gmxlib/statutil.c:528:14: warning: unused variable 'newdesc' [-Wunused-variable] char *ptr,*newdesc; ^ ../../../src/gmxlib/statutil.c:528:9: warning: unused variable 'ptr' [-Wunused-variable] char *ptr,*newdesc; ^ ../../../src/gmxlib/statutil.c:491:11: warning: unused variable 'npri_pa' [-Wunused-variable] t_pargs npri_pa = { "-npri", FALSE, etINT, {&npri}, ^ ../../../src/gmxlib/statutil.c:485:27: warning: unused variable 'mantp' [-Wunused-variable] static int nicelevel=0,mantp=0,npri=0,debug_level=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/statutil.c:47: ../../../src/gmxlib/statutil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/statutil.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/statutil.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/statutil.c:73:14: warning: 'timelabel' defined but not used [-Wunused-variable] static char *timelabel = NULL; ^ ../../../src/gmxlib/statutil.c:361:13: warning: 'pdesc' defined but not used [-Wunused-function] static void pdesc(char *desc) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o string2.lo ../../../src/gmxlib/string2.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o symtab.lo ../../../src/gmxlib/symtab.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/strdb.c -fPIC -DPIC -o .libs/strdb.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topsort.lo ../../../src/gmxlib/topsort.c ../../../src/gmxlib/shift_util.c: In function 'shift_LRcorrection': ../../../src/gmxlib/shift_util.c:257:10: warning: unused variable 'shift' [-Wunused-variable] ivec shift; ^ ../../../src/gmxlib/shift_util.c:253:42: warning: unused variable 'qtot' [-Wunused-variable] real qi,dr,dr2,dr_1,dr_3,fscal,Vexcl,qtot=0; ^ ../../../src/gmxlib/shift_util.c:252:10: warning: unused variable 'isp' [-Wunused-variable] double isp=0.564189583547756; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/shift_util.c:43: ../../../src/gmxlib/shift_util.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/shift_util.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/shift_util.c:370:13: warning: 'rgbset' defined but not used [-Wunused-function] static real rgbset(real col) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/symtab.c -fPIC -DPIC -o .libs/symtab.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/string2.c -fPIC -DPIC -o .libs/string2.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpxio.lo ../../../src/gmxlib/tpxio.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/topsort.c -fPIC -DPIC -o .libs/topsort.o ../../../src/gmxlib/topsort.c: In function 'gmx_sort_ilist_fe': ../../../src/gmxlib/topsort.c:142:10: warning: unused variable 'bPert' [-Wunused-variable] bool bPert; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trnio.lo ../../../src/gmxlib/trnio.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/tpxio.c -fPIC -DPIC -o .libs/tpxio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trxio.lo ../../../src/gmxlib/trxio.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/trnio.c -fPIC -DPIC -o .libs/trnio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o txtdump.lo ../../../src/gmxlib/txtdump.c ../../../src/gmxlib/tpxio.c: In function 'do_ilist': ../../../src/gmxlib/tpxio.c:987:10: warning: unused variable 'k' [-Wunused-variable] int i,k,idum; ^ ../../../src/gmxlib/tpxio.c: In function 'do_ffparams': ../../../src/gmxlib/tpxio.c:1008:15: warning: unused variable 'j' [-Wunused-variable] int idum,i,j,k; ^ ../../../src/gmxlib/tpxio.c: In function 'do_ilists': ../../../src/gmxlib/tpxio.c:1061:8: warning: unused variable 'bDum' [-Wunused-variable] bool bDum=TRUE,bClear; ^ ../../../src/gmxlib/tpxio.c:1060:13: warning: unused variable 'renum' [-Wunused-variable] int i,j,k,renum[F_NRE]; ^ ../../../src/gmxlib/tpxio.c:1060:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k,renum[F_NRE]; ^ ../../../src/gmxlib/tpxio.c: In function 'do_groups': ../../../src/gmxlib/tpxio.c:1276:10: warning: unused variable 'n' [-Wunused-variable] int g,n,i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_moltype': ../../../src/gmxlib/tpxio.c:1393:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_molblock': ../../../src/gmxlib/tpxio.c:1420:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_mtop': ../../../src/gmxlib/tpxio.c:1547:14: warning: unused variable 'i' [-Wunused-variable] int mt,mb,i; ^ ../../../src/gmxlib/tpxio.c: In function 'read_tpx_top': ../../../src/gmxlib/tpxio.c:2005:15: warning: unused variable 'ltop' [-Wunused-variable] t_topology *ltop; ^ ../../../src/gmxlib/tpxio.c: In function 'read_tps_conf': ../../../src/gmxlib/tpxio.c:2035:17: warning: unused variable 'topconv' [-Wunused-variable] t_topology *topconv; ^ In file included from ../../../src/gmxlib/tpxio.c:60:0: ../../../src/gmxlib/tpxio.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/tpxio.c:61: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/tpxio.c:61:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/trxio.c -fPIC -DPIC -o .libs/trxio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o typedefs.lo ../../../src/gmxlib/typedefs.c In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/trxio.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/trxio.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/trxio.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/trxio.c:53:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/txtdump.c -fPIC -DPIC -o .libs/txtdump.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/typedefs.c -fPIC -DPIC -o .libs/typedefs.o ../../../src/gmxlib/txtdump.c: In function 'pr_qm_opts': ../../../src/gmxlib/txtdump.c:339:11: warning: unused variable 'j' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c:339:9: warning: unused variable 'm' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c:339:7: warning: unused variable 'i' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_ffparams': ../../../src/gmxlib/txtdump.c:906:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_block_title': ../../../src/gmxlib/txtdump.c:950:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_blocka_title': ../../../src/gmxlib/txtdump.c:963:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_block': ../../../src/gmxlib/txtdump.c:1016:9: warning: unused variable 'j' [-Wunused-variable] int i,j,ok,size,start,end; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_atom': ../../../src/gmxlib/txtdump.c:1120:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o viewit.lo ../../../src/gmxlib/viewit.c ../../../src/gmxlib/txtdump.c: In function 'pr_groups': ../../../src/gmxlib/txtdump.c:1151:9: warning: unused variable 'grpnr' [-Wunused-variable] int grpnr[egcNR]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/txtdump.c:51: ../../../src/gmxlib/txtdump.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/txtdump.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/txtdump.c:976:13: warning: 'low_pr_block' defined but not used [-Wunused-function] static void low_pr_block(FILE *fp,int indent,const char *title,t_block *block, bool bShowNumbers) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wgms.lo ../../../src/gmxlib/wgms.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wman.lo ../../../src/gmxlib/wman.c ../../../src/gmxlib/typedefs.c: In function 'init_block': ../../../src/gmxlib/typedefs.c:64:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_blocka': ../../../src/gmxlib/typedefs.c:74:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_atom': ../../../src/gmxlib/typedefs.c:87:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_top': ../../../src/gmxlib/typedefs.c:135:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'done_top': ../../../src/gmxlib/typedefs.c:284:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_state': ../../../src/gmxlib/typedefs.c:386:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/typedefs.c:43: ../../../src/gmxlib/typedefs.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/typedefs.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o writeps.lo ../../../src/gmxlib/writeps.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/viewit.c -fPIC -DPIC -o .libs/viewit.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/wgms.c -fPIC -DPIC -o .libs/wgms.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/wman.c -fPIC -DPIC -o .libs/wman.o In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/viewit.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdrd.lo ../../../src/gmxlib/xdrd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/writeps.c -fPIC -DPIC -o .libs/writeps.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/wgms.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/wman.c: In function 'mydate': ../../../src/gmxlib/wman.c:168:15: warning: unused variable 'num' [-Wunused-variable] const char *num[] = { "01", "02", "03", "04", "05", "06","07", "08", "09" }; ^ ../../../src/gmxlib/wman.c: In function 'print_tty_formatted': ../../../src/gmxlib/wman.c:510:16: warning: unused variable 'j' [-Wunused-variable] int buflen,i,j; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xtcio.lo ../../../src/gmxlib/xtcio.c ../../../src/gmxlib/wman.c: In function 'write_wikiman': ../../../src/gmxlib/wman.c:631:14: warning: unused variable 'tmp2' [-Wunused-variable] char *tmp,*tmp2; ^ ../../../src/gmxlib/wman.c:630:17: warning: unused variable 'link' [-Wunused-variable] char buf[256],link[10]; ^ ../../../src/gmxlib/wman.c: In function 'write_htmlman': ../../../src/gmxlib/wman.c:682:8: warning: unused variable 'link' [-Wunused-variable] char link[10],tmp[255]; ^ ../../../src/gmxlib/wman.c: In function 'write_py': ../../../src/gmxlib/wman.c:925:8: warning: unused variable 'bHidden' [-Wunused-variable] bool bHidden; ^ In file included from ../../../src/gmxlib/wman.c:48:0: ../../../src/gmxlib/wman.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xvgr.lo ../../../src/gmxlib/xvgr.c In file included from ../../../src/gmxlib/writeps.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xdrd.c -fPIC -DPIC -o .libs/xdrd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xvgr.c -fPIC -DPIC -o .libs/xvgr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xtcio.c -fPIC -DPIC -o .libs/xtcio.o ../../../src/gmxlib/xvgr.c: In function 'use_xmgr': ../../../src/gmxlib/xvgr.c:56:8: warning: unused variable 'bXMGR' [-Wunused-variable] bool bXMGR; ^ ../../../src/gmxlib/xvgr.c: In function 'read_xvg_time': ../../../src/gmxlib/xvgr.c:402:14: warning: unused variable 'tend' [-Wunused-variable] double dbl,tend=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/xvgr.c:45: ../../../src/gmxlib/xvgr.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/xvgr.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/xvgr.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/xvgr.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/xtcio.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/xtcio.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o libxdrf.lo ../../../src/gmxlib/libxdrf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_arpack.lo ../../../src/gmxlib/gmx_arpack.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dihres.lo ../../../src/gmxlib/dihres.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tcontrol.lo ../../../src/gmxlib/tcontrol.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/libxdrf.c -fPIC -DPIC -o .libs/libxdrf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_arpack.c -fPIC -DPIC -o .libs/gmx_arpack.o In file included from ../../../include/xdrf.h:41:0, from ../../../src/gmxlib/libxdrf.c:46: ../../../src/gmxlib/libxdrf.c:145:10: warning: return type defaults to 'int' [-Wimplicit-int] F77_FUNC(xdrfshort,XDRFSHORT)(int *xdrid, short *sp, int *ret) ^ ../../src/config.h:28:29: note: in definition of macro 'F77_FUNC' #define F77_FUNC(name,NAME) name ## _ ^ ../../../src/gmxlib/libxdrf.c: In function 'xdr3dfcoord': ../../../src/gmxlib/libxdrf.c:705:9: warning: unused variable 'rc' [-Wunused-variable] int rc; ^ ../../../src/gmxlib/libxdrf.c: In function 'xtc_get_next_frame_start': ../../../src/gmxlib/libxdrf.c:1374:9: warning: unused variable 'inp' [-Wunused-variable] int inp; ^ ../../../src/gmxlib/libxdrf.c: In function 'xdr_xtc_seek_time': ../../../src/gmxlib/libxdrf.c:1522:9: warning: unused variable 'res' [-Wunused-variable] int res; ^ ../../../src/gmxlib/libxdrf.c: In function 'xtc_get_last_frame_number': ../../../src/gmxlib/libxdrf.c:1691:9: warning: unused variable 'res' [-Wunused-variable] int res; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/libxdrf.c:45: ../../../src/gmxlib/libxdrf.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/libxdrf.c: In function 'xdrfshort_': ../../../src/gmxlib/libxdrf.c:149:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/tcontrol.c -fPIC -DPIC -o .libs/tcontrol.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o splitter.lo ../../../src/gmxlib/splitter.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/dihres.c -fPIC -DPIC -o .libs/dihres.o In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/tcontrol.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/tcontrol.c:61:22: warning: 'timeconvert' defined but not used [-Wunused-variable] static t_timeconvert timeconvert[] = { ^ ../../../src/gmxlib/dihres.c: In function 'ta_dihres': /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_cyclecounter.lo ../../../src/gmxlib/gmx_cyclecounter.c ../../../src/gmxlib/dihres.c:77:30: warning: unused variable 'dp2' [-Wunused-variable] real phi0,phi,ddphi,ddp,dp,dp2,dphi,kfac,cos_phi,sign,d2r,fc; ^ ../../../src/gmxlib/dihres.c:76:29: warning: unused variable 'typep' [-Wunused-variable] int ai,aj,ak,al,i,k,type,typep,label,power,t1,t2,t3; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/dihres.c:46: ../../../src/gmxlib/dihres.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/dihres.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/dihres.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/splitter.c -fPIC -DPIC -o .libs/splitter.o ../../../src/gmxlib/splitter.c: In function 'split_force2': ../../../src/gmxlib/splitter.c:112:17: warning: variable 'type' set but not used [-Wunused-but-set-variable] int i,j,k,type,nodeid,nratoms,tnr; ^ ../../../src/gmxlib/splitter.c:112:13: warning: unused variable 'j' [-Wunused-variable] int i,j,k,type,nodeid,nratoms,tnr; ^ ../../../src/gmxlib/splitter.c: In function 'mk_border': ../../../src/gmxlib/splitter.c:244:14: warning: unused variable 'j' [-Wunused-variable] int i,j,is,ic,ns,nc,nbor; ^ ../../../src/gmxlib/splitter.c: In function 'split_blocks': ../../../src/gmxlib/splitter.c:316:11: warning: unused variable 'bSHK' [-Wunused-variable] bool bSHK; ^ ../../../src/gmxlib/splitter.c:312:19: warning: unused variable 'last_shk' [-Wunused-variable] int nodeid,last_shk,nbor; ^ ../../../src/gmxlib/splitter.c:311:17: warning: unused variable 'ai' [-Wunused-variable] int i,ii,ai,b0,b1; ^ ../../../src/gmxlib/splitter.c:311:14: warning: unused variable 'ii' [-Wunused-variable] int i,ii,ai,b0,b1; ^ ../../../src/gmxlib/splitter.c: In function 'merge_sid': ../../../src/gmxlib/splitter.c:556:8: warning: unused variable 'nChanged' [-Wunused-variable] int nChanged; ^ ../../../src/gmxlib/splitter.c: In function 'gen_sblocks': ../../../src/gmxlib/splitter.c:654:11: warning: unused variable 'isid' [-Wunused-variable] int isid,nsid; ^ ../../../src/gmxlib/splitter.c:652:27: warning: unused variable 'n' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:20: warning: unused variable 'istart' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:18: warning: unused variable 'k' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:16: warning: unused variable 'j' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c: In function 'split_top': ../../../src/gmxlib/splitter.c:755:21: warning: unused variable 'minidx' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:755:15: warning: unused variable 'ihome' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:755:7: warning: unused variable 'minhome' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:754:14: warning: unused variable 'ia' [-Wunused-variable] t_iatom *ia; ^ ../../../src/gmxlib/splitter.c:753:31: warning: unused variable 'nrd' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:27: warning: unused variable 'nra' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:13: warning: unused variable 'nvsite_constr' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:7: warning: unused variable 'ftype' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:748:59: warning: unused variable 'nodeid' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:52: warning: unused variable 'bstart' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:47: warning: unused variable 'send' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:40: warning: unused variable 'sstart' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:32: warning: unused variable 'maxatom' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:18: warning: unused variable 'i' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c: At top level: ../../../src/gmxlib/splitter.c:726:17: warning: 'block2blocka' defined but not used [-Wunused-function] static t_blocka block2blocka(t_block *block) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_cyclecounter.c -fPIC -DPIC -o .libs/gmx_cyclecounter.o /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libgmx.la -rpath /usr/lib64 3dview.lo atomprop.lo bondfree.lo calcgrid.lo calch.lo checkpoint.lo confio.lo copyrite.lo disre.lo do_fit.lo enxio.lo ewald_util.lo gmx_fatal.lo ffscanf.lo filenm.lo futil.lo gbutil.lo gmxfio.lo ifunc.lo index.lo cinvsqrtdata.lo invblock.lo macros.lo orires.lo sparsematrix.lo main.lo maths.lo matio.lo mshift.lo mtop_util.lo mtxio.lo mvdata.lo names.lo network.lo nrama.lo nrjac.lo nrnb.lo pargs.lo pbc.lo pdbio.lo princ.lo rando.lo random.lo gmx_random.lo rbin.lo readinp.lo replace.lo rmpbc.lo shift_util.lo sortwater.lo smalloc.lo statutil.lo strdb.lo string2.lo symtab.lo topsort.lo tpxio.lo trnio.lo trxio.lo txtdump.lo typedefs.lo viewit.lo wgms.lo wman.lo writeps.lo xdrd.lo xtcio.lo xvgr.lo libxdrf.lo gmx_arpack.lo dihres.lo tcontrol.lo splitter.lo gmx_cyclecounter.lo nonbonded/libnonbonded.la gmx_blas/libblas.la gmx_lapack/liblapack.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath x86_64-alt-linux-gcc -shared .libs/3dview.o .libs/atomprop.o .libs/bondfree.o .libs/calcgrid.o .libs/calch.o .libs/checkpoint.o .libs/confio.o .libs/copyrite.o .libs/disre.o .libs/do_fit.o .libs/enxio.o .libs/ewald_util.o .libs/gmx_fatal.o .libs/ffscanf.o .libs/filenm.o .libs/futil.o .libs/gbutil.o .libs/gmxfio.o .libs/ifunc.o .libs/index.o .libs/cinvsqrtdata.o .libs/invblock.o .libs/macros.o .libs/orires.o .libs/sparsematrix.o .libs/main.o .libs/maths.o .libs/matio.o .libs/mshift.o .libs/mtop_util.o .libs/mtxio.o .libs/mvdata.o .libs/names.o .libs/network.o .libs/nrama.o .libs/nrjac.o .libs/nrnb.o .libs/pargs.o .libs/pbc.o .libs/pdbio.o .libs/princ.o .libs/rando.o .libs/random.o .libs/gmx_random.o .libs/rbin.o .libs/readinp.o .libs/replace.o .libs/rmpbc.o .libs/shift_util.o .libs/sortwater.o .libs/smalloc.o .libs/statutil.o .libs/strdb.o .libs/string2.o .libs/symtab.o .libs/topsort.o .libs/tpxio.o .libs/trnio.o .libs/trxio.o .libs/txtdump.o .libs/typedefs.o .libs/viewit.o .libs/wgms.o .libs/wman.o .libs/writeps.o .libs/xdrd.o .libs/xtcio.o .libs/xvgr.o .libs/libxdrf.o .libs/gmx_arpack.o .libs/dihres.o .libs/tcontrol.o .libs/splitter.o .libs/gmx_cyclecounter.o -Wl,--whole-archive nonbonded/.libs/libnonbonded.a gmx_blas/.libs/libblas.a gmx_lapack/.libs/liblapack.a -Wl,--no-whole-archive -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lgslcblas -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libgmx.so.5 -o .libs/libgmx.so.5.0.0 (cd .libs && rm -f libgmx.so.5 && ln -s libgmx.so.5.0.0 libgmx.so.5) (cd .libs && rm -f libgmx.so && ln -s libgmx.so.5.0.0 libgmx.so) creating libgmx.la (cd .libs && rm -f libgmx.la && ln -s ../libgmx.la libgmx.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' Making all in mdlib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcmu.lo ../../../src/mdlib/calcmu.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcvir.lo ../../../src/mdlib/calcvir.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o constr.lo ../../../src/mdlib/constr.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o coupling.lo ../../../src/mdlib/coupling.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec.lo ../../../src/mdlib/domdec.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_con.lo ../../../src/mdlib/domdec_con.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_network.lo ../../../src/mdlib/domdec_network.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_setup.lo ../../../src/mdlib/domdec_setup.c mkdir .libs mkdir .libs mkdir: cannot create directory '.libs': File exists x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/calcmu.c -fPIC -DPIC -o .libs/calcmu.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/constr.c -fPIC -DPIC -o .libs/constr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/calcvir.c -fPIC -DPIC -o .libs/calcvir.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_network.c -fPIC -DPIC -o .libs/domdec_network.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec.c -fPIC -DPIC -o .libs/domdec.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_setup.c -fPIC -DPIC -o .libs/domdec_setup.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/coupling.c -fPIC -DPIC -o .libs/coupling.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_con.c -fPIC -DPIC -o .libs/domdec_con.o ../../../src/mdlib/coupling.c: In function 'berendsen_pcoupl': ../../../src/mdlib/coupling.c:267:11: warning: unused variable 'ptr' [-Wunused-variable] char *ptr,buf[STRLEN]; ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/coupling.c:42: ../../../src/mdlib/coupling.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/update.h:49, from ../../../src/mdlib/coupling.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/update.h:49, from ../../../src/mdlib/coupling.c:42: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/calcvir.c:42:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/calcvir.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/calcvir.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/calcvir.c:47:13: warning: 'dprod1' defined but not used [-Wunused-function] static void dprod1(rvec vir,real x,rvec f) ^ ../../../src/mdlib/calcvir.c:160:13: warning: 'lo_fcv2' defined but not used [-Wunused-function] static void lo_fcv2(int i0,int i1, ^ ../../../src/mdlib/domdec_setup.c: In function 'guess_npme': ../../../src/mdlib/domdec_setup.c:83:13: warning: unused variable 'try' [-Wunused-variable] t_inputrec try; ^ ../../../src/mdlib/domdec_setup.c:82:16: warning: unused variable 'nky' [-Wunused-variable] int npme,nkx,nky,ndiv,*div,*mdiv,ldiv; ^ ../../../src/mdlib/domdec_setup.c:82:12: warning: unused variable 'nkx' [-Wunused-variable] int npme,nkx,nky,ndiv,*div,*mdiv,ldiv; ^ ../../../src/mdlib/domdec_setup.c: In function 'assign_factors': ../../../src/mdlib/domdec_setup.c:329:13: warning: unused variable 'z' [-Wunused-variable] int x,y,z,i; ^ ../../../src/mdlib/domdec_setup.c: In function 'dd_choose_grid': ../../../src/mdlib/domdec_setup.c:493:19: warning: unused variable 'nky' [-Wunused-variable] int npme,nkx,nky; ^ ../../../src/mdlib/domdec_setup.c:493:15: warning: unused variable 'nkx' [-Wunused-variable] int npme,nkx,nky; ^ ../../../src/mdlib/domdec_setup.c:493:10: warning: unused variable 'npme' [-Wunused-variable] int npme,nkx,nky; ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/domdec_setup.c:29: ../../../src/mdlib/domdec_setup.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_setup.c:32: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_setup.c:32:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_top.lo ../../../src/mdlib/domdec_top.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ebin.lo ../../../src/mdlib/ebin.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_top.c -fPIC -DPIC -o .libs/domdec_top.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ebin.c -fPIC -DPIC -o .libs/ebin.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o edsam.lo ../../../src/mdlib/edsam.c ../../../src/mdlib/domdec.c: In function 'dd_move_cellx': ../../../src/mdlib/domdec.c:785:41: warning: unused variable 'k' [-Wunused-variable] int d,d1,dim,dim1,pos,buf_size,i,j,k,p,npulse; ^ ../../../src/mdlib/domdec.c:785:19: warning: unused variable 'dim1' [-Wunused-variable] int d,d1,dim,dim1,pos,buf_size,i,j,k,p,npulse; ^ ../../../src/mdlib/domdec.c: In function 'dd_collect_vec': ../../../src/mdlib/domdec.c:1212:11: warning: unused variable 'buf' [-Wunused-variable] rvec *buf=NULL; ^ ../../../src/mdlib/domdec.c:1211:18: warning: unused variable 'nalloc' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:16: warning: unused variable 'a' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:14: warning: unused variable 'c' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:12: warning: unused variable 'i' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:10: warning: unused variable 'n' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1210:26: warning: unused variable 'ma' [-Wunused-variable] gmx_domdec_master_t *ma; ^ ../../../src/mdlib/domdec.c: In function 'dd_distribute_vec_scatterv': ../../../src/mdlib/domdec.c:1427:18: warning: unused variable 'nalloc' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c: In function 'gmx_ddcoord2pmeindex': ../../../src/mdlib/domdec.c:1805:28: warning: unused variable 'nc' [-Wunused-variable] ivec coords,coords_pme,nc; ^ ../../../src/mdlib/domdec.c:1805:17: warning: unused variable 'coords_pme' [-Wunused-variable] ivec coords,coords_pme,nc; ^ ../../../src/mdlib/domdec.c: In function 'dd_simnode2pmenode': ../../../src/mdlib/domdec.c:1874:16: warning: unused variable 'coord_pme' [-Wunused-variable] ivec coord,coord_pme; ^ ../../../src/mdlib/domdec.c:1874:10: warning: unused variable 'coord' [-Wunused-variable] ivec coord,coord_pme; ^ ../../../src/mdlib/domdec.c: In function 'receive_vir_ener': ../../../src/mdlib/domdec.c:2005:30: warning: unused variable 'rank' [-Wunused-variable] int pmenode,coords[DIM],rank; ^ ../../../src/mdlib/domdec.c:2005:18: warning: unused variable 'coords' [-Wunused-variable] int pmenode,coords[DIM],rank; ^ ../../../src/mdlib/domdec.c: In function 'make_dd_indices': ../../../src/mdlib/domdec.c:2107:11: warning: variable 'bLocalCG' set but not used [-Wunused-but-set-variable] char *bLocalCG; ^ ../../../src/mdlib/domdec.c: In function 'check_bLocalCG': ../../../src/mdlib/domdec.c:2162:9: warning: unused variable 'ncg' [-Wunused-variable] int ncg,i,ngl,nerr; ^ ../../../src/mdlib/domdec.c: In function 'dd_redistribute_cg': ../../../src/mdlib/domdec.c:3706:49: warning: unused variable 'cell_d' [-Wunused-variable] int c,i,cg,k,k0,k1,d,dim,dim2,dir,d2,d3,d4,cell_d; ^ ../../../src/mdlib/domdec.c:3706:46: warning: unused variable 'd4' [-Wunused-variable] int c,i,cg,k,k0,k1,d,dim,dim2,dir,d2,d3,d4,cell_d; ^ ../../../src/mdlib/domdec.c: In function 'get_load_distribution': ../../../src/mdlib/domdec.c:4326:16: warning: unused variable 'cid' [-Wunused-variable] int d,dim,cid,i,pos; ^ ../../../src/mdlib/domdec.c: In function 'setup_dd_grid': ../../../src/mdlib/domdec.c:4781:10: warning: unused variable 'bZYX' [-Wunused-variable] bool bZYX; ^ ../../../src/mdlib/domdec.c: In function 'make_pp_communicator': ../../../src/mdlib/domdec.c:4944:10: warning: unused variable 'periods' [-Wunused-variable] ivec periods; ^ ../../../src/mdlib/domdec.c:4943:18: warning: unused variable 'buf' [-Wunused-variable] int i,rank,*buf; ^ ../../../src/mdlib/domdec.c:4943:12: warning: unused variable 'rank' [-Wunused-variable] int i,rank,*buf; ^ ../../../src/mdlib/domdec.c:4943:10: warning: unused variable 'i' [-Wunused-variable] int i,rank,*buf; ^ ../../../src/mdlib/domdec.c:4942:24: warning: variable 'comm' set but not used [-Wunused-but-set-variable] gmx_domdec_comm_t *comm; ^ ../../../src/mdlib/domdec.c: In function 'receive_ddindex2simnodeid': ../../../src/mdlib/domdec.c:5069:11: warning: unused variable 'buf' [-Wunused-variable] int *buf; ^ ../../../src/mdlib/domdec.c:5068:24: warning: variable 'comm' set but not used [-Wunused-but-set-variable] gmx_domdec_comm_t *comm; ^ ../../../src/mdlib/domdec.c: In function 'split_communicator': ../../../src/mdlib/domdec.c:5131:10: warning: unused variable 'periods' [-Wunused-variable] ivec periods; ^ ../../../src/mdlib/domdec.c:5129:12: warning: unused variable 'rank' [-Wunused-variable] int i,rank; ^ ../../../src/mdlib/domdec.c: In function 'check_dlb_support': ../../../src/mdlib/domdec.c:5598:9: warning: label 'edlbYES' defined but not used [-Wunused-label] edlbYES: ^ ../../../src/mdlib/domdec.c:5594:9: warning: label 'edlbAUTO' defined but not used [-Wunused-label] edlbAUTO: ^ ../../../src/mdlib/domdec.c:5592:9: warning: label 'edlbNO' defined but not used [-Wunused-label] edlbNO: ^ ../../../src/mdlib/domdec.c:5553:19: warning: unused variable 'dd' [-Wunused-variable] gmx_domdec_t *dd; ^ ../../../src/mdlib/domdec.c: In function 'init_domain_decomposition': ../../../src/mdlib/domdec.c:5652:14: warning: unused variable 'j' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c:5652:12: warning: unused variable 'i' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c:5652:10: warning: unused variable 'd' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c: In function 'turn_on_dlb': ../../../src/mdlib/domdec.c:6010:10: warning: unused variable 'buf' [-Wunused-variable] char buf[STRLEN]; ^ ../../../src/mdlib/domdec.c: In function 'dd_init_bondeds': ../../../src/mdlib/domdec.c:6086:10: warning: unused variable 'd' [-Wunused-variable] int d; ^ ../../../src/mdlib/domdec.c:6085:10: warning: unused variable 'bBondComm' [-Wunused-variable] bool bBondComm; ^ ../../../src/mdlib/domdec.c: In function 'setup_dd_communication': ../../../src/mdlib/domdec.c:6486:64: warning: unused variable 'inv_ncg' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:58: warning: unused variable 'r2inc' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:47: warning: unused variable 'r_1' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:43: warning: unused variable 'r_0' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:23: warning: unused variable 'r_scomm2' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:10: warning: unused variable 'r_mb' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c: In function 'dd_partition_system': ../../../src/mdlib/domdec.c:7481:12: warning: unused variable 'j' [-Wunused-variable] int i,j,n,cg0=0,ncg_home_old=-1; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec.c:31: ../../../src/mdlib/domdec.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec.c:31:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/domdec.c:41: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/domdec.c:44: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/domdec.c:1781:13: warning: 'dd_pmenodes' defined but not used [-Wunused-function] static int *dd_pmenodes(t_commrec *cr) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/calcmu.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/calcmu.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/domdec_con.c: In function 'dd_make_local_vsites': ../../../src/mdlib/domdec_con.c:925:25: warning: unused variable 'gat' [-Wunused-variable] int ftype,nral,i,j,gat,a; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/edsam.c -fPIC -DPIC -o .libs/edsam.o ../../../src/mdlib/domdec_con.c: In function 'init_domdec_vsites': ../../../src/mdlib/domdec_con.c:1047:31: warning: unused variable 'dc' [-Wunused-variable] gmx_domdec_constraints_t *dc; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_con.c:25: ../../../src/mdlib/domdec_con.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_con.c:25:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ewald.lo ../../../src/mdlib/ewald.c ../../../src/mdlib/domdec_top.c: In function 'print_missing_interactions_mb': ../../../src/mdlib/domdec_top.c:113:56: warning: unused variable 'a_gl' [-Wunused-variable] int ftype,ftype_j,nral,i,j_mol,j,k,a0,a0_mol,mol,a,a_gl; ^ ../../../src/mdlib/domdec_top.c:113:38: warning: unused variable 'k' [-Wunused-variable] int ftype,ftype_j,nral,i,j_mol,j,k,a0,a0_mol,mol,a,a_gl; ^ ../../../src/mdlib/domdec_top.c: In function 'global_atomnr_to_moltype_ind': ../../../src/mdlib/domdec_top.c:349:7: warning: unused variable 'molb' [-Wunused-variable] int molb; ^ ../../../src/mdlib/domdec_top.c: In function 'count_excls': ../../../src/mdlib/domdec_top.c:364:11: warning: unused variable 'n_inter' [-Wunused-variable] int n,n_inter,cg,at0,at1,at,excl,atj; ^ ../../../src/mdlib/domdec_top.c: In function 'dd_make_reverse_top': ../../../src/mdlib/domdec_top.c:611:19: warning: unused variable 'n_recursive_vsite' [-Wunused-variable] int mb,natoms,n_recursive_vsite,nexcl,nexcl_icg,a; ^ ../../../src/mdlib/domdec_top.c: In function 'add_vsite': ../../../src/mdlib/domdec_top.c:760:37: warning: unused variable 'iatoms_r' [-Wunused-variable] t_iatom tiatoms[1+MAXATOMLIST],*iatoms_r; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/edsam.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/edsam.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/edsam.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/edsam.c:316:13: warning: 'dump_xcoll' defined but not used [-Wunused-function] static void dump_xcoll(t_edpar *edi, struct t_do_edsam *buf, t_commrec *cr, int step) ^ ../../../src/mdlib/edsam.c:387:13: warning: 'dump_edi' defined but not used [-Wunused-function] static void dump_edi(t_edpar *edpars, t_commrec *cr, int nr_edi) ^ ../../../src/mdlib/edsam.c:439:13: warning: 'dump_rotmat' defined but not used [-Wunused-function] static void dump_rotmat(FILE* out,matrix rotmat) ^ ../../../src/mdlib/edsam.c:448:13: warning: 'dump_rvec' defined but not used [-Wunused-function] static void dump_rvec(FILE *out, int dim, rvec *x) ^ ../../../src/mdlib/edsam.c:459:13: warning: 'dump_mat' defined but not used [-Wunused-function] static void dump_mat(FILE* out, int dim, double** mat) ^ ../../../src/mdlib/edsam.c:964:13: warning: 'get_flood_enx_names' defined but not used [-Wunused-function] static void get_flood_enx_names(t_edpar *edi, char** names, int *nnames) /* get header of energies */ ^ ../../../src/mdlib/edsam.c:983:13: warning: 'get_flood_energies' defined but not used [-Wunused-function] static void get_flood_energies(t_edpar *edi, real Vfl[],int nnames) ^ ../../../src/mdlib/domdec_top.c: In function 'dd_make_local_top': ../../../src/mdlib/domdec_top.c:1408:10: warning: unused variable 'bUniqueExcl' [-Wunused-variable] bool bUniqueExcl,bRCheckMB,bRCheck2B,bRCheckExcl; ^ ../../../src/mdlib/domdec_top.c: In function 'check_link': ../../../src/mdlib/domdec_top.c:1590:12: warning: unused variable 'aj' [-Wunused-variable] int k,aj; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_top.c:31: ../../../src/mdlib/domdec_top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_top.c:31:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/constr.c: In function 'too_many_constraint_warnings': ../../../src/mdlib/constr.c:132:9: warning: unused variable 'abort' [-Wunused-variable] char *abort="- aborting to avoid logfile runaway.\n" ^ ../../../src/mdlib/constr.c: In function 'constrain': ../../../src/mdlib/constr.c:234:11: warning: unused variable 'ncons' [-Wunused-variable] int ncons,error; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ewald.c -fPIC -DPIC -o .libs/ewald.o ../../../src/mdlib/constr.c: In function 'init_constraints': ../../../src/mdlib/constr.c:772:37: warning: unused variable 'natoms' [-Wunused-variable] int ncon,nset,nmol,settle_type,i,natoms,mt,nflexcon; ^ ../../../src/mdlib/constr.c: In function 'inter_charge_group_constraints': ../../../src/mdlib/constr.c:903:8: warning: unused variable 'nat' [-Wunused-variable] int nat,*at2cg,cg,a,i; ^ In file included from ../../../src/mdlib/constr.c:42:0: ../../../src/mdlib/constr.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/constr.c:45: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/mdlib/constr.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/mdlib/constr.c:45: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/constr.c:53:0: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/mdlib/constr.c:110:12: warning: 'icomp' defined but not used [-Wunused-function] static int icomp(const void *p1, const void *p2) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/ewald.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ewald.c:43:0: ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/ewald.c:44:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fftgrid.lo ../../../src/mdlib/fftgrid.c ../../../src/mdlib/ebin.c: In function 'add_ebin': ../../../src/mdlib/ebin.c:89:18: warning: unused variable 'sigma' [-Wunused-variable] double e,sum,sigma,invmm,diff; ^ ../../../src/mdlib/ebin.c:89:14: warning: unused variable 'sum' [-Wunused-variable] double e,sum,sigma,invmm,diff; ^ In file included from ../../../src/mdlib/ebin.c:50:0: ../../../src/mdlib/ebin.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ebin.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o force.lo ../../../src/mdlib/force.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/force.c -fPIC -DPIC -o .libs/force.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/fftgrid.c -fPIC -DPIC -o .libs/fftgrid.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ghat.lo ../../../src/mdlib/ghat.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o init.lo ../../../src/mdlib/init.c ../../../src/mdlib/fftgrid.c: In function 'mk_fftgrid': ../../../src/mdlib/fftgrid.c:97:25: warning: unused variable 'maxlocalsize' [-Wunused-variable] int x1,y1,maxlocalsize; ^ In file included from ../../../include/fftgrid.h:46:0, from ../../../src/mdlib/fftgrid.c:51: ../../../src/mdlib/fftgrid.c: At top level: ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/force.c: In function 'check_solvent_cg': ../../../src/mdlib/force.c:162:23: warning: unused variable 'excl' [-Wunused-variable] const t_blocka * excl; ^ ../../../src/mdlib/force.c: In function 'check_solvent': ../../../src/mdlib/force.c:406:23: warning: variable 'mols' set but not used [-Wunused-but-set-variable] const t_block * mols; ^ ../../../src/mdlib/force.c: In function 'set_avcsixtwelve': ../../../src/mdlib/force.c:687:46: warning: unused variable 'n' [-Wunused-variable] int mb,nmol,nmolc,i,j,tpi,tpj,j1,j2,k,n,nexcl,q; ^ ../../../src/mdlib/force.c: In function 'init_forcerec': ../../../src/mdlib/force.c:1048:16: warning: variable 'nbl' set but not used [-Wunused-but-set-variable] t_nblists *nbl; ^ ../../../src/mdlib/force.c:1043:26: warning: unused variable 'ngrp' [-Wunused-variable] int i,j,m,natoms,ngrp,negp_pp,negptable,egi,egj; ^ ../../../src/mdlib/force.c:1043:15: warning: unused variable 'j' [-Wunused-variable] int i,j,m,natoms,ngrp,negp_pp,negptable,egi,egj; ^ ../../../src/mdlib/force.c: In function 'do_force_lowlevel': ../../../src/mdlib/force.c:1549:20: warning: unused variable 'timesteps' [-Wunused-variable] static int timesteps=0; ^ ../../../src/mdlib/force.c:1548:32: warning: unused variable 't_wait' [-Wunused-variable] static double t_fnbf=0.0, t_wait=0.0; ^ ../../../src/mdlib/force.c:1548:20: warning: unused variable 't_fnbf' [-Wunused-variable] static double t_fnbf=0.0, t_wait=0.0; ^ ../../../src/mdlib/force.c:1540:13: warning: unused variable 'bDoEpot' [-Wunused-variable] bool bDoEpot,bSepDVDL,bSB; ^ ../../../src/mdlib/force.c:1539:15: warning: unused variable 'nit' [-Wunused-variable] int i,nit,status; ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/force.c:62: ../../../src/mdlib/force.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/mdlib/force.c:64: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/mdlib/force.c:64: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/force.c:69:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ghat.c -fPIC -DPIC -o .libs/ghat.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/init.c -fPIC -DPIC -o .libs/init.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/ghat.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ghat.c:44:0: ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/ghat.c:47: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/init.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/init.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/init.c:51: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/init.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdatom.lo ../../../src/mdlib/mdatom.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mdatom.c -fPIC -DPIC -o .libs/mdatom.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdebin.lo ../../../src/mdlib/mdebin.c ../../../src/mdlib/mdatom.c: In function 'init_mdatoms': ../../../src/mdlib/mdatom.c:56:12: warning: unused variable 'ilist' [-Wunused-variable] t_ilist *ilist; ^ ../../../src/mdlib/mdatom.c:51:17: warning: unused variable 'nmol' [-Wunused-variable] int mb,a,g,nmol; ^ ../../../src/mdlib/mdatom.c:51:15: warning: unused variable 'g' [-Wunused-variable] int mb,a,g,nmol; ^ ../../../src/mdlib/mdatom.c:51:10: warning: unused variable 'mb' [-Wunused-variable] int mb,a,g,nmol; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o minimize.lo ../../../src/mdlib/minimize.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mvxvf.lo ../../../src/mdlib/mvxvf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mdebin.c -fPIC -DPIC -o .libs/mdebin.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mvxvf.c -fPIC -DPIC -o .libs/mvxvf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/minimize.c -fPIC -DPIC -o .libs/minimize.o ../../../src/mdlib/mdebin.c: In function 'print_ebin': ../../../src/mdlib/mdebin.c:530:31: warning: unused variable 'nor' [-Wunused-variable] int i,j,n,ni,nj,ndr,nor; ^ ../../../src/mdlib/mdebin.c:530:27: warning: unused variable 'ndr' [-Wunused-variable] int i,j,n,ni,nj,ndr,nor; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/mdebin.c:48: ../../../src/mdlib/mdebin.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/mdebin.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/minimize.c: In function 'get_f_norm_max': ../../../src/mdlib/minimize.c:153:14: warning: unused variable 'fmax2_0' [-Wunused-variable] real fmax2,fmax2_0,fam; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ns.lo ../../../src/mdlib/ns.c ../../../src/mdlib/minimize.c: In function 'evaluate_energy': ../../../src/mdlib/minimize.c:573:12: warning: unused variable 'state' [-Wunused-variable] t_state *state; ^ ../../../src/mdlib/minimize.c: In function 'do_cg': ../../../src/mdlib/minimize.c:813:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate=0; ^ ../../../src/mdlib/minimize.c:798:26: warning: unused variable 'sum' [-Wunused-variable] double gpa,gpb,gpc,tmp,sum[2],minstep; ^ ../../../src/mdlib/minimize.c:797:28: warning: unused variable 'sfm' [-Wunused-variable] rvec *f_global,*p,*sf,*sfm; ^ ../../../src/mdlib/minimize.c: In function 'do_lbfgs': ../../../src/mdlib/minimize.c:1329:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate; ^ ../../../src/mdlib/minimize.c:1320:20: warning: variable 'first' set but not used [-Wunused-but-set-variable] bool converged,first; ^ ../../../src/mdlib/minimize.c: In function 'do_steep': ../../../src/mdlib/minimize.c:1957:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate=0; ^ ../../../src/mdlib/minimize.c:1946:16: warning: unused variable 'dvdlambda' [-Wunused-variable] real ustep,dvdlambda,fnormn; ^ ../../../src/mdlib/minimize.c:1945:19: warning: unused variable 'constepsize' [-Wunused-variable] real stepsize,constepsize; ^ ../../../src/mdlib/minimize.c: In function 'do_nm': ../../../src/mdlib/minimize.c:2163:22: warning: unused variable 'fmax' [-Wunused-variable] real fnorm,fmax; ^ ../../../src/mdlib/minimize.c:2163:16: warning: unused variable 'fnorm' [-Wunused-variable] real fnorm,fmax; ^ ../../../src/mdlib/minimize.c:2151:16: warning: unused variable 'nfmax' [-Wunused-variable] int nfmax,count; ^ ../../../src/mdlib/minimize.c:2149:16: warning: unused variable 'bNS' [-Wunused-variable] bool bNS; ^ ../../../src/mdlib/minimize.c:2148:18: warning: variable 'lambda' set but not used [-Wunused-but-set-variable] real t,lambda,t0,lam0; ^ ../../../src/mdlib/minimize.c: In function 'do_tpi': ../../../src/mdlib/minimize.c:2419:18: warning: unused variable 'end' [-Wunused-variable] int i,start,end; ^ ../../../src/mdlib/minimize.c:2419:12: warning: unused variable 'start' [-Wunused-variable] int i,start,end; ^ ../../../src/mdlib/minimize.c:2404:15: warning: unused variable 'TPI' [-Wunused-variable] const char *TPI="Test Particle Insertion"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/mvxvf.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/mvxvf.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/minimize.c:47:0: ../../../src/mdlib/minimize.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/update.h:49, from ../../../src/mdlib/minimize.c:59: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/update.h:49, from ../../../src/mdlib/minimize.c:59: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/minimize.c:63: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/minimize.c:83: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/minimize.c:493:13: warning: 'do_x_step' defined but not used [-Wunused-function] static void do_x_step(t_commrec *cr,int n,rvec *x1,real a,rvec *f,rvec *x2) ^ ../../../src/mdlib/minimize.c:515:13: warning: 'do_x_sub' defined but not used [-Wunused-function] static void do_x_sub(t_commrec *cr,int n,rvec *x1,rvec *x2,real a,rvec *f) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ns.c -fPIC -DPIC -o .libs/ns.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nsgrid.lo ../../../src/mdlib/nsgrid.c ../../../src/mdlib/ns.c: In function 'new_i_nblist': ../../../src/mdlib/ns.c:394:20: warning: unused variable 'nshift' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c:394:14: warning: unused variable 'k' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c:394:12: warning: unused variable 'i' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c: In function 'put_in_list': ../../../src/mdlib/ns.c:546:25: warning: unused variable 'rlj' [-Wunused-variable] real qi,qiB,qq,rlj; ^ ../../../src/mdlib/ns.c:546:22: warning: unused variable 'qq' [-Wunused-variable] real qi,qiB,qq,rlj; ^ ../../../src/mdlib/ns.c:541:23: warning: unused variable 'len' [-Wunused-variable] int i0,nicg,len; ^ ../../../src/mdlib/ns.c:539:39: warning: unused variable 'ind_ij' [-Wunused-variable] int i,j,jcg,igid,gid,nbl_ind,ind_ij; ^ ../../../src/mdlib/ns.c: In function 'ns_inner_tric': ../../../src/mdlib/ns.c:1283:15: warning: unused variable 'nsbuf' [-Wunused-variable] t_ns_buf *nsbuf; ^ ../../../src/mdlib/ns.c: In function 'ns_inner_rect': ../../../src/mdlib/ns.c:1314:15: warning: unused variable 'nsbuf' [-Wunused-variable] t_ns_buf *nsbuf; ^ ../../../src/mdlib/ns.c: In function 'ns_simple_core': ../../../src/mdlib/ns.c:1365:38: warning: unused variable 'nri' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c:1365:35: warning: unused variable 'i0' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c:1365:26: warning: unused variable 'jcg' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c: In function 'nsgrid_core': ../../../src/mdlib/ns.c:1674:58: warning: unused variable 'dcz' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1674:54: warning: unused variable 'dcy' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1674:50: warning: unused variable 'dcx' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1673:13: warning: unused variable 'xi' [-Wunused-variable] rvec xi,*cgcm,grid_offset; ^ ../../../src/mdlib/ns.c:1669:42: warning: unused variable 'nri' [-Wunused-variable] int cg0,cg1,icg=-1,cgsnr,i0,igid,nri,naaj,max_jcg; ^ ../../../src/mdlib/ns.c:1666:45: warning: variable 'grid_z' set but not used [-Wunused-but-set-variable] real gridx,gridy,gridz,grid_x,grid_y,grid_z; ^ ../../../src/mdlib/ns.c: In function 'init_ns': ../../../src/mdlib/ns.c:2177:11: warning: unused variable 'ptr' [-Wunused-variable] char *ptr; ^ ../../../src/mdlib/ns.c: In function 'search_neighbours': ../../../src/mdlib/ns.c:2280:23: warning: unused variable 'cg_end' [-Wunused-variable] int cg_start,cg_end,start,end; ^ ../../../src/mdlib/ns.c:2280:14: warning: unused variable 'cg_start' [-Wunused-variable] int cg_start,cg_end,start,end; ^ ../../../src/mdlib/ns.c:2279:15: warning: unused variable 'i_egp_flags' [-Wunused-variable] bool *i_egp_flags; ^ ../../../src/mdlib/ns.c:2278:15: warning: unused variable 'ptr' [-Wunused-variable] char *ptr; ^ ../../../src/mdlib/ns.c:2274:16: warning: unused variable 'j' [-Wunused-variable] int i,j,m,ngid; ^ ../../../src/mdlib/ns.c:2274:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,ngid; ^ In file included from ../../../src/mdlib/ns.c:50:0: ../../../src/mdlib/ns.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ns.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/ns.c:54:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/nsgrid.c -fPIC -DPIC -o .libs/nsgrid.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o perf_est.lo ../../../src/mdlib/perf_est.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pme.lo ../../../src/mdlib/pme.c ../../../src/mdlib/nsgrid.c: In function 'init_grid': ../../../src/mdlib/nsgrid.c:181:10: warning: unused variable 'm' [-Wunused-variable] int d,m; ^ ../../../src/mdlib/nsgrid.c:181:8: warning: unused variable 'd' [-Wunused-variable] int d,m; ^ ../../../src/mdlib/nsgrid.c: In function 'grid_first': ../../../src/mdlib/nsgrid.c:278:10: warning: unused variable 'cx' [-Wunused-variable] ivec cx; ^ ../../../src/mdlib/nsgrid.c: In function 'fill_grid': ../../../src/mdlib/nsgrid.c:421:10: warning: variable 'nrx' set but not used [-Wunused-but-set-variable] int nrx,nry,nrz; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/nsgrid.c:47: ../../../src/mdlib/nsgrid.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/nsgrid.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pme.c -fPIC -DPIC -o .libs/pme.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/perf_est.c -fPIC -DPIC -o .libs/perf_est.o ../../../src/mdlib/perf_est.c: In function 'n_bonded_dx': ../../../src/mdlib/perf_est.c:62:2: warning: label 'F_CONNBONDS' defined but not used [-Wunused-label] F_CONNBONDS: ndxb = 0; break; ^ ../../../src/mdlib/perf_est.c:61:2: warning: label 'F_POSRES' defined but not used [-Wunused-label] F_POSRES: ndxb = 1; break; ^ ../../../src/mdlib/perf_est.c: In function 'pme_load_estimate': ../../../src/mdlib/perf_est.c:89:21: warning: unused variable 'fljtab' [-Wunused-variable] float fq,fqlj,flj,fljtab,fqljw,fqw,fqspread,ffft,fbond; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/perf_est.c:41: ../../../src/mdlib/perf_est.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/perf_est.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pme_pp.lo ../../../src/mdlib/pme_pp.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pme_pp.c -fPIC -DPIC -o .libs/pme_pp.o ../../../src/mdlib/pme.c: In function 'pmeredist': ../../../src/mdlib/pme.c:380:12: warning: unused variable 'ii' [-Wunused-variable] int i, ii; ^ ../../../src/mdlib/pme.c:380:9: warning: unused variable 'i' [-Wunused-variable] int i, ii; ^ ../../../src/mdlib/pme.c:379:10: warning: variable 'idxa' set but not used [-Wunused-but-set-variable] int *idxa; ^ ../../../src/mdlib/pme.c: In function 'gmx_sum_qgrid_dd': ../../../src/mdlib/pme.c:660:18: warning: unused variable 'to' [-Wunused-variable] real *from, *to; ^ ../../../src/mdlib/pme.c:660:11: warning: unused variable 'from' [-Wunused-variable] real *from, *to; ^ ../../../src/mdlib/pme.c:659:22: warning: unused variable 'pgc' [-Wunused-variable] pme_grid_comm_t *pgc; ^ ../../../src/mdlib/pme.c:658:15: warning: unused variable 'localsize' [-Wunused-variable] int la12r,localsize; ^ ../../../src/mdlib/pme.c:658:9: warning: unused variable 'la12r' [-Wunused-variable] int la12r,localsize; ^ ../../../src/mdlib/pme.c:657:11: warning: unused variable 'i' [-Wunused-variable] int b,i; ^ ../../../src/mdlib/pme.c:657:9: warning: unused variable 'b' [-Wunused-variable] int b,i; ^ ../../../src/mdlib/pme.c:656:18: warning: unused variable 'tmp' [-Wunused-variable] static real *tmp=NULL; ^ ../../../src/mdlib/pme.c: In function 'gmx_sum_qgrid': ../../../src/mdlib/pme.c:756:16: warning: unused variable 'maxproc' [-Wunused-variable] static int maxproc; ^ ../../../src/mdlib/pme.c:755:16: warning: unused variable 'localsize' [-Wunused-variable] static int localsize; ^ ../../../src/mdlib/pme.c:754:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/mdlib/pme.c:753:18: warning: unused variable 'tmp' [-Wunused-variable] static real *tmp; ^ ../../../src/mdlib/pme.c:752:17: warning: unused variable 'bFirst' [-Wunused-variable] static bool bFirst=TRUE; ^ ../../../src/mdlib/pme.c: In function 'spread_q_bsplines': ../../../src/mdlib/pme.c:840:20: warning: unused variable 'bndsize' [-Wunused-variable] int localsize, bndsize; ^ ../../../src/mdlib/pme.c:840:9: warning: unused variable 'localsize' [-Wunused-variable] int localsize, bndsize; ^ ../../../src/mdlib/pme.c:835:16: warning: unused variable 'i' [-Wunused-variable] int b,i,nn,n,*i0,*j0,*k0,*ii0,*jj0,*kk0,ithx,ithy,ithz; ^ ../../../src/mdlib/pme.c:835:14: warning: unused variable 'b' [-Wunused-variable] int b,i,nn,n,*i0,*j0,*k0,*ii0,*jj0,*kk0,ithx,ithy,ithz; ^ ../../../src/mdlib/pme.c:834:20: warning: unused variable 'ol' [-Wunused-variable] pme_overlap_t *ol; ^ ../../../src/mdlib/pme_pp.c: In function 'gmx_pme_pp_init': ../../../src/mdlib/pme_pp.c:112:7: warning: unused variable 'rank' [-Wunused-variable] int rank; ^ ../../../src/mdlib/pme.c: In function 'init_atomcomm': ../../../src/mdlib/pme.c:1441:22: warning: unused variable 'pgc' [-Wunused-variable] pme_grid_comm_t *pgc; ^ ../../../src/mdlib/pme.c:1440:12: warning: unused variable 'nk' [-Wunused-variable] int nn,nk; ^ ../../../src/mdlib/pme.c:1440:9: warning: unused variable 'nn' [-Wunused-variable] int nn,nk; ^ ../../../src/mdlib/pme.c:1439:27: warning: unused variable 'i' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:25: warning: unused variable 'b' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:19: warning: unused variable 'maxlr' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:14: warning: unused variable 'rbnd' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:9: warning: unused variable 'lbnd' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme_pp.c: In function 'gmx_pme_recv_q_x': ../../../src/mdlib/pme_pp.c:261:9: warning: unused variable 'charge_pp' [-Wunused-variable] real *charge_pp; ^ ../../../src/mdlib/pme_pp.c:260:25: warning: unused variable 'sender' [-Wunused-variable] int nat=0,q,messages,sender; ^ ../../../src/mdlib/pme_pp.c:260:16: warning: variable 'messages' set but not used [-Wunused-but-set-variable] int nat=0,q,messages,sender; ^ ../../../src/mdlib/pme_pp.c:260:14: warning: unused variable 'q' [-Wunused-variable] int nat=0,q,messages,sender; ^ ../../../src/mdlib/pme_pp.c: In function 'gmx_pme_send_force_vir_ener': ../../../src/mdlib/pme_pp.c:446:7: warning: variable 'messages' set but not used [-Wunused-but-set-variable] int messages,ind_start,ind_end,receiver; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pme_pp.c:48: ../../../src/mdlib/pme_pp.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pme_pp.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/pme_pp.c:49: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/pme_pp.c:133:13: warning: 'gmx_pme_send_q_x_wait' defined but not used [-Wunused-function] static void gmx_pme_send_q_x_wait(gmx_domdec_t *dd) ^ ../../../src/mdlib/pme.c: In function 'gmx_pme_init': ../../../src/mdlib/pme.c:1541:25: warning: unused variable 'maxlr' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:20: warning: unused variable 'rbnd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:15: warning: unused variable 'lbnd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:11: warning: unused variable 'd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:9: warning: unused variable 'b' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pme.c:70: ../../../src/mdlib/pme.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pme.c:70:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/pme.c:71:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../src/mdlib/pme.c:81:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/pme.c:198:13: warning: 'pr_grid_dist' defined but not used [-Wunused-function] static void pr_grid_dist(FILE *fp,char *title,t_fftgrid *grid) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pppm.lo ../../../src/mdlib/pppm.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o partdec.lo ../../../src/mdlib/partdec.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pppm.c -fPIC -DPIC -o .libs/pppm.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/partdec.c -fPIC -DPIC -o .libs/partdec.o ../../../src/mdlib/partdec.c: In function 'pr_idef_division': ../../../src/mdlib/partdec.c:343:15: warning: variable 'nr' set but not used [-Wunused-but-set-variable] int i,ftype,nr,nra,m0,m1; ^ ../../../src/mdlib/partdec.c: In function 'create_vsitelist': ../../../src/mdlib/partdec.c:477:7: warning: unused variable 'minidx' [-Wunused-variable] int minidx; ^ ../../../src/mdlib/partdec.c: In function 'setup_parallel_vsites': ../../../src/mdlib/partdec.c:511:15: warning: unused variable 'k' [-Wunused-variable] int i,inr,j,k,ftype; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pull.lo ../../../src/mdlib/pull.c ../../../src/mdlib/pppm.c: In function 'convolution': ../../../src/mdlib/pppm.c:384:14: warning: unused variable 'jend' [-Wunused-variable] int jstart,jend; ^ ../../../src/mdlib/pppm.c:384:7: warning: unused variable 'jstart' [-Wunused-variable] int jstart,jend; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pppm.c:45: ../../../src/mdlib/pppm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pppm.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/pppm.c:51: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/pppm.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/pppm.c:616:12: warning: 'gmx_pppm_opt_do' defined but not used [-Wunused-function] static int gmx_pppm_opt_do(FILE *log, gmx_pme_t pme, ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pull.c -fPIC -DPIC -o .libs/pull.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pullutil.lo ../../../src/mdlib/pullutil.c ../../../src/mdlib/pull.c: In function 'apply_forces_grp': ../../../src/mdlib/pull.c:155:20: warning: variable 'end' set but not used [-Wunused-but-set-variable] int i,ii,m,start,end; ^ ../../../src/mdlib/pull.c: In function 'do_constraint': ../../../src/mdlib/pull.c:283:22: warning: unused variable 'mass' [-Wunused-variable] double lambda, rm, mass, invdt=0; ^ ../../../src/mdlib/pull.c:282:10: warning: unused variable 'd0' [-Wunused-variable] double d0,inpr; ^ ../../../src/mdlib/pull.c: In function 'init_pull_group_index': ../../../src/mdlib/pull.c:779:16: warning: variable 'ga2la' set but not used [-Wunused-but-set-variable] gmx_ga2la_t *ga2la=NULL; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/pull.c:46: ../../../src/mdlib/pull.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pull.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pull.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/pull.c:60: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pullutil.c -fPIC -DPIC -o .libs/pullutil.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rf_util.lo ../../../src/mdlib/rf_util.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/rf_util.c -fPIC -DPIC -o .libs/rf_util.o ../../../src/mdlib/pullutil.c: In function 'pull_set_pbcatom': ../../../src/mdlib/pullutil.c:85:9: warning: unused variable 'm' [-Wunused-variable] int a,m; ^ ../../../src/mdlib/pullutil.c: In function 'pull_calc_coms': ../../../src/mdlib/pullutil.c:278:9: warning: unused variable 'xx' [-Wunused-variable] rvec *xx[2],x_pbc={0,0,0},dx; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/pullutil.c:45: ../../../src/mdlib/pullutil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pullutil.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pullutil.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shakef.lo ../../../src/mdlib/shakef.c ../../../src/mdlib/rf_util.c: In function 'RF_excl_correction': ../../../src/mdlib/rf_util.c:59:10: warning: unused variable 'top' [-Wunused-variable] int top,i,j,j1,j2,k,ki; ^ In file included from ../../../src/mdlib/rf_util.c:42:0: ../../../src/mdlib/rf_util.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/rf_util.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/rf_util.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/rf_util.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sim_util.lo ../../../src/mdlib/sim_util.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shellfc.lo ../../../src/mdlib/shellfc.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/sim_util.c -fPIC -DPIC -o .libs/sim_util.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/shakef.c -fPIC -DPIC -o .libs/shakef.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/shellfc.c -fPIC -DPIC -o .libs/shellfc.o ../../../src/mdlib/shakef.c: In function 'cshake': ../../../src/mdlib/shakef.c:79:19: warning: unused variable 'tjz' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:79:15: warning: unused variable 'tjy' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:79:11: warning: unused variable 'tjx' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:78:19: warning: unused variable 'tiz' [-Wunused-variable] real tix,tiy,tiz; ^ ../../../src/mdlib/shakef.c:78:15: warning: unused variable 'tiy' [-Wunused-variable] real tix,tiy,tiz; ^ ../../../src/mdlib/shakef.c:78:11: warning: unused variable 'tix' [-Wunused-variable] real tix,tiy,tiz; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/shakef.c:46: ../../../src/mdlib/shakef.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/shakef.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/shakef.c:51:13: warning: 'pv' defined but not used [-Wunused-function] static void pv(FILE *log,char *s,rvec x) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o stat.lo ../../../src/mdlib/stat.c ../../../src/mdlib/shellfc.c: In function 'predict_shells': ../../../src/mdlib/shellfc.c:115:18: warning: unused variable 'dt_3' [-Wunused-variable] real dt_1,dt_2,dt_3,fudge,tm,m1,m2,m3; ^ ../../../src/mdlib/shellfc.c:115:13: warning: unused variable 'dt_2' [-Wunused-variable] real dt_1,dt_2,dt_3,fudge,tm,m1,m2,m3; ^ ../../../src/mdlib/shellfc.c: In function 'init_shell_flexcon': ../../../src/mdlib/shellfc.c:197:32: warning: unused variable 'mt' [-Wunused-variable] int i,j,nmol,type,mb,mt,a_offset,cg,mol,ftype,nra; ^ ../../../src/mdlib/shellfc.c:197:19: warning: unused variable 'nmol' [-Wunused-variable] int i,j,nmol,type,mb,mt,a_offset,cg,mol,ftype,nra; ^ ../../../src/mdlib/shellfc.c: In function 'init_adir': ../../../src/mdlib/shellfc.c:694:12: warning: unused variable 'dx' [-Wunused-variable] rvec p,dx; ^ ../../../src/mdlib/shellfc.c:694:10: warning: unused variable 'p' [-Wunused-variable] rvec p,dx; ^ ../../../src/mdlib/shellfc.c:691:13: warning: unused variable 'scale' [-Wunused-variable] real dt,scale; ^ ../../../src/mdlib/shellfc.c:690:16: warning: unused variable 'gt' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c:690:13: warning: unused variable 'ga' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c:690:10: warning: unused variable 'gf' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c: In function 'relax_shell_flexcon': ../../../src/mdlib/shellfc.c:776:19: warning: unused variable 'g' [-Wunused-variable] int nflexcon,g,number_steps,d,Min=0,count=0; ^ ../../../src/mdlib/shellfc.c:772:10: warning: unused variable 'cbuf' [-Wunused-variable] char cbuf[56]; ^ ../../../src/mdlib/shellfc.c:771:19: warning: unused variable 'xiS' [-Wunused-variable] real ftol,xiH,xiS,dum=0; ^ ../../../src/mdlib/shellfc.c:771:15: warning: unused variable 'xiH' [-Wunused-variable] real ftol,xiH,xiS,dum=0; ^ ../../../src/mdlib/shellfc.c:769:10: warning: unused variable 'dx' [-Wunused-variable] rvec dx; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/shellfc.c:43: ../../../src/mdlib/shellfc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/shellfc.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/shellfc.c:45: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/shellfc.c:55:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/sim_util.c: In function 'calc_virial': ../../../src/mdlib/sim_util.c:250:10: warning: unused variable 'virtest' [-Wunused-variable] tensor virtest; ^ ../../../src/mdlib/sim_util.c:249:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/mdlib/sim_util.c: In function 'do_force': ../../../src/mdlib/sim_util.c:357:24: warning: unused variable 'cycles_pme' [-Wunused-variable] float cycles_ppdpme,cycles_pme,cycles_force; ^ ../../../src/mdlib/sim_util.c:355:10: warning: unused variable 'e' [-Wunused-variable] real e,v,dvdl; ^ ../../../src/mdlib/sim_util.c:354:10: warning: unused variable 'boxs' [-Wunused-variable] matrix boxs; ^ ../../../src/mdlib/sim_util.c:353:57: warning: unused variable 'bBS' [-Wunused-variable] bool bSepDVDL,bStateChanged,bNS,bFillGrid,bCalcCGCM,bBS,bDoForces; ^ ../../../src/mdlib/sim_util.c:348:15: warning: unused variable 'box_size' [-Wunused-variable] static rvec box_size; ^ ../../../src/mdlib/sim_util.c: In function 'calc_enervirdiff': ../../../src/mdlib/sim_util.c:823:13: warning: variable 'r1' set but not used [-Wunused-but-set-variable] double r0,r1,r,rc3,rc9,ea,eb,ec,pa,pb,pc,pd; ^ ../../../src/mdlib/sim_util.c: In function 'init_md': ../../../src/mdlib/sim_util.c:1222:13: warning: unused variable 'mod' [-Wunused-variable] real tmpt,mod; ^ ../../../src/mdlib/sim_util.c:1222:8: warning: unused variable 'tmpt' [-Wunused-variable] real tmpt,mod; ^ ../../../src/mdlib/sim_util.c:1221:12: warning: unused variable 'n' [-Wunused-variable] int i,j,n; ^ ../../../src/mdlib/sim_util.c:1221:10: warning: unused variable 'j' [-Wunused-variable] int i,j,n; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/sim_util.c:57: ../../../src/mdlib/sim_util.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/sim_util.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/sim_util.c:68: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../src/mdlib/sim_util.c:78:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/stat.c -fPIC -DPIC -o .libs/stat.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/stat.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/stat.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/stat.c:53:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/stat.c:63: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tables.lo ../../../src/mdlib/tables.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tgroup.lo ../../../src/mdlib/tgroup.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o update.lo ../../../src/mdlib/update.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/tables.c -fPIC -DPIC -o .libs/tables.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/tgroup.c -fPIC -DPIC -o .libs/tgroup.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vcm.lo ../../../src/mdlib/vcm.c ../../../src/mdlib/tgroup.c: In function 'init_grptcstat': ../../../src/mdlib/tgroup.c:57:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/tgroup.c:48: ../../../src/mdlib/tgroup.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/tgroup.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/tgroup.c:51: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/tgroup.c:141:13: warning: 'accumulate_ekin' defined but not used [-Wunused-function] static void accumulate_ekin(t_commrec *cr,t_grpopts *opts, ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/update.c -fPIC -DPIC -o .libs/update.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vsite.lo ../../../src/mdlib/vsite.c ../../../src/mdlib/tables.c: In function 'done_tabledata': ../../../src/mdlib/tables.c:470:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/mdlib/tables.c: In function 'make_tables': ../../../src/mdlib/tables.c:835:17: warning: unused variable 'j' [-Wunused-variable] int i,j,k,nx,nx0,tabsel[etiNR]; ^ ../../../src/mdlib/tables.c: In function 'make_bonded_table': ../../../src/mdlib/tables.c:950:10: warning: variable 'start' set but not used [-Wunused-but-set-variable] double start; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/tables.c:47: ../../../src/mdlib/tables.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/tables.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/tables.c:51:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/tables.c:155:13: warning: 'splint' defined but not used [-Wunused-function] static void splint(real xa[],real ya[],real y2a[], ^ ../../../src/mdlib/update.c: In function 'update': ../../../src/mdlib/update.c:771:39: warning: unused variable 'g' [-Wunused-variable] int start,homenr,i,n,m,g; ^ ../../../src/mdlib/update.c:770:20: warning: variable 'dt_1' set but not used [-Wunused-but-set-variable] real dt_1; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/update.c:50: ../../../src/mdlib/update.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/update.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/update.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/update.c:62:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/vsite.c -fPIC -DPIC -o .libs/vsite.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/vcm.c -fPIC -DPIC -o .libs/vcm.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wall.lo ../../../src/mdlib/wall.c ../../../src/mdlib/vsite.c: In function 'constr_vsiten': ../../../src/mdlib/vsite.c:437:8: warning: unused variable 'xs' [-Wunused-variable] rvec xs,x1,dx; ^ ../../../src/mdlib/vsite.c: In function 'construct_vsites': ../../../src/mdlib/vsite.c:484:25: warning: unused variable 'rtmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:484:20: warning: unused variable 'vtmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:484:13: warning: unused variable 'reftmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:478:19: warning: unused variable 'ii' [-Wunused-variable] int i,inc,ii,nra,nr,tp,ftype; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite2': ../../../src/mdlib/vsite.c:655:11: warning: unused variable 'b' [-Wunused-variable] real b; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite3FD': ../../../src/mdlib/vsite.c:770:23: warning: unused variable 'd' [-Wunused-variable] int svi,sji,skj,d; ^ ../../../src/mdlib/vsite.c:767:14: warning: unused variable 'fz' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c:767:11: warning: unused variable 'fy' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c:767:8: warning: unused variable 'fx' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vcm.c: In function 'calc_vcm_grp': ../../../src/mdlib/vcm.c:122:28: warning: unused variable 'zz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:25: warning: unused variable 'yz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:22: warning: unused variable 'yy' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:19: warning: unused variable 'xz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:16: warning: unused variable 'xy' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:13: warning: unused variable 'xx' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c: In function 'do_stopcm_grp': ../../../src/mdlib/vcm.c:171:11: warning: unused variable 'tm_1' [-Wunused-variable] real tm,tm_1; ^ ../../../src/mdlib/vcm.c:171:8: warning: unused variable 'tm' [-Wunused-variable] real tm,tm_1; ^ ../../../src/mdlib/vcm.c:170:12: warning: unused variable 'm' [-Wunused-variable] int i,g,m; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite_f': ../../../src/mdlib/vcm.c: In function 'check_cm_grp': ../../../src/mdlib/vcm.c:250:14: warning: unused variable 'Tcm' [-Wunused-variable] tensor Icm,Tcm; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/vcm.c:43: ../../../src/mdlib/vcm.c: At top level: ../../../src/mdlib/vsite.c:1255:19: warning: unused variable 'm' [-Wunused-variable] int i,inc,m,nra,nr,tp,ftype; ^ ../../../src/mdlib/vsite.c: In function 'count_intercg_vsite': x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/wall.c -fPIC -DPIC -o .libs/wall.o ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/vcm.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/vsite.c:1409:11: warning: unused variable 'mt' [-Wunused-variable] int mb,mt,ftype,nral,i,cg,a; ^ ../../../src/mdlib/vsite.c: In function 'get_vsite_pbc': ../../../src/mdlib/vsite.c:1448:38: warning: unused variable 'cg_c' [-Wunused-variable] int ftype,nral,i,j,vsi,vsite,cg_v,cg_c,a,nc3=0; ^ ../../../src/mdlib/vsite.c: In function 'init_vsite': ../../../src/mdlib/vsite.c:1559:13: warning: unused variable 'cg' [-Wunused-variable] int *a2cg,cg; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/vsite.c:46: ../../../src/mdlib/vsite.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/vsite.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/wall.c: In function 'do_walls': ../../../src/mdlib/wall.c:107:47: warning: unused variable 'Heps' [-Wunused-variable] real tabscale,*VFtab,rt,eps,eps2,Yt,Ft,Geps,Heps,Heps2,Fp,VV,FF; ^ ../../../src/mdlib/wall.c:103:50: warning: variable 'Fwall' set but not used [-Wunused-but-set-variable] real *nbfp,lamfac,fac_d[2],fac_r[2],Cd,Cr,Vtot,Fwall[2]; ^ In file included from ../../../src/mdlib/wall.c:45:0: ../../../src/mdlib/wall.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/wall.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/wall.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wnblist.lo ../../../src/mdlib/wnblist.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/wnblist.c -fPIC -DPIC -o .libs/wnblist.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o csettle.lo ../../../src/mdlib/csettle.c ../../../src/mdlib/wnblist.c: In function 'read_nblist': ../../../src/mdlib/wnblist.c:135:27: warning: unused variable 'icmp' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:135:22: warning: unused variable 'full' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:135:17: warning: unused variable 'nnbl' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:134:26: warning: unused variable 'b2' [-Wunused-variable] char buf[256],b1[32],b2[32],solv[256],il_code[256]; ^ ../../../src/mdlib/wnblist.c:134:19: warning: unused variable 'b1' [-Wunused-variable] char buf[256],b1[32],b2[32],solv[256],il_code[256]; ^ ../../../src/mdlib/wnblist.c:133:10: warning: unused variable 'bNL' [-Wunused-variable] bool bNL; ^ In file included from ../../../src/mdlib/wnblist.c:44:0: ../../../src/mdlib/wnblist.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/csettle.c -fPIC -DPIC -o .libs/csettle.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o clincs.lo ../../../src/mdlib/clincs.c ../../../src/mdlib/csettle.c: In function 'xshake': ../../../src/mdlib/csettle.c:183:39: warning: unused variable 'conv' [-Wunused-variable] int i,ll,ii,jj,l3,ix,iy,iz,jx,jy,jz,conv; ^ ../../../src/mdlib/csettle.c: In function 'csettle': ../../../src/mdlib/csettle.c:298:10: warning: unused variable 'shakeret' [-Wunused-variable] int i, shakeret, ow1, hw2, hw3; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/csettle.c:42: ../../../src/mdlib/csettle.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/csettle.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o qmmm.lo ../../../src/mdlib/qmmm.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/clincs.c -fPIC -DPIC -o .libs/clincs.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/qmmm.c -fPIC -DPIC -o .libs/qmmm.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fft.lo ../../../src/mdlib/gmx_fft.c ../../../src/mdlib/clincs.c: In function 'do_lincsp': /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_parallel_3dfft.lo ../../../src/mdlib/gmx_parallel_3dfft.c ../../../src/mdlib/qmmm.c: In function 'update_QMMMrec': ../../../src/mdlib/qmmm.c:725:6: warning: unused variable 'MMatoms' [-Wunused-variable] *MMatoms; ^ ../../../src/mdlib/qmmm.c:721:17: warning: variable 'QMMMlist_lr' set but not used [-Wunused-but-set-variable] QMMMlist_sr,QMMMlist_lr; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/qmmm.c:48: ../../../src/mdlib/qmmm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/qmmm.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/qmmm.c:49:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/qmmm.c:60:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/qmmm.c:131:12: warning: 'int_comp' defined but not used [-Wunused-function] static int int_comp(const void *a,const void *b){ ^ ../../../src/mdlib/clincs.c:189:54: warning: unused variable 'lam' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:49: warning: unused variable 'wfac' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:45: warning: unused variable 'len' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:40: warning: unused variable 'rlen' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c: In function 'set_lincs': ../../../src/mdlib/clincs.c:764:14: warning: variable 'bLocal' set but not used [-Wunused-but-set-variable] bool bLocal; ^ ../../../src/mdlib/clincs.c: In function 'constrain_lincs': ../../../src/mdlib/clincs.c:1084:25: warning: unused variable 'error' [-Wunused-variable] int i,warn,p_imax,error; ^ In file included from ../../../src/mdlib/clincs.c:45:0: ../../../src/mdlib/clincs.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/clincs.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/clincs.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/clincs.c:50: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/clincs.c:1034:13: warning: 'dump_conf' defined but not used [-Wunused-function] static void dump_conf(gmx_domdec_t *dd,struct gmx_lincsdata *li, ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_fft.c -fPIC -DPIC -o .libs/gmx_fft.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_parallel_3dfft.c -fPIC -DPIC -o .libs/gmx_parallel_3dfft.o In file included from ../../../src/mdlib/gmx_fft.c:30:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wallcycle.lo ../../../src/mdlib/gmx_wallcycle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_wallcycle.c -fPIC -DPIC -o .libs/gmx_wallcycle.o ../../../src/mdlib/gmx_wallcycle.c: In function 'wallcycle_sum': ../../../src/mdlib/gmx_wallcycle.c:163:31: warning: unused variable 'buf_all' [-Wunused-variable] double buf[ewcNR],*cyc_all,*buf_all; ^ ../../../src/mdlib/gmx_wallcycle.c:163:22: warning: unused variable 'cyc_all' [-Wunused-variable] double buf[ewcNR],*cyc_all,*buf_all; ^ ../../../src/mdlib/gmx_wallcycle.c:163:10: warning: unused variable 'buf' [-Wunused-variable] double buf[ewcNR],*cyc_all,*buf_all; ^ ../../../src/mdlib/gmx_wallcycle.c: At top level: ../../../src/mdlib/gmx_wallcycle.c:59:26: warning: 'wc_barrier' defined but not used [-Wunused-variable] static bool wc_barrier=FALSE; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o qm_gaussian.lo ../../../src/mdlib/qm_gaussian.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fft_fftw3.lo ../../../src/mdlib/gmx_fft_fftw3.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/qm_gaussian.c -fPIC -DPIC -o .libs/qm_gaussian.o ../../../src/mdlib/qm_gaussian.c: In function 'init_gaussian': ../../../src/mdlib/qm_gaussian.c:73:6: warning: unused variable 'rffile' [-Wunused-variable] *rffile=NULL,*out=NULL; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_fft_fftw3.c -fPIC -DPIC -o .libs/gmx_fft_fftw3.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/qm_gaussian.c:48: ../../../src/mdlib/qm_gaussian.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/qm_gaussian.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/qm_gaussian.c:49:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/qm_gaussian.c:60:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/mdlib/gmx_fft_fftw3.c:27: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libmd.la -rpath /usr/lib64 calcmu.lo calcvir.lo constr.lo coupling.lo domdec.lo domdec_con.lo domdec_network.lo domdec_setup.lo domdec_top.lo ebin.lo edsam.lo ewald.lo fftgrid.lo force.lo ghat.lo init.lo mdatom.lo mdebin.lo minimize.lo mvxvf.lo ns.lo nsgrid.lo perf_est.lo pme.lo pme_pp.lo pppm.lo partdec.lo pull.lo pullutil.lo rf_util.lo shakef.lo sim_util.lo shellfc.lo stat.lo tables.lo tgroup.lo update.lo vcm.lo vsite.lo wall.lo wnblist.lo csettle.lo clincs.lo qmmm.lo gmx_fft.lo gmx_parallel_3dfft.lo gmx_wallcycle.lo qm_gaussian.lo gmx_fft_fftw3.lo ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath x86_64-alt-linux-gcc -shared .libs/calcmu.o .libs/calcvir.o .libs/constr.o .libs/coupling.o .libs/domdec.o .libs/domdec_con.o .libs/domdec_network.o .libs/domdec_setup.o .libs/domdec_top.o .libs/ebin.o .libs/edsam.o .libs/ewald.o .libs/fftgrid.o .libs/force.o .libs/ghat.o .libs/init.o .libs/mdatom.o .libs/mdebin.o .libs/minimize.o .libs/mvxvf.o .libs/ns.o .libs/nsgrid.o .libs/perf_est.o .libs/pme.o .libs/pme_pp.o .libs/pppm.o .libs/partdec.o .libs/pull.o .libs/pullutil.o .libs/rf_util.o .libs/shakef.o .libs/sim_util.o .libs/shellfc.o .libs/stat.o .libs/tables.o .libs/tgroup.o .libs/update.o .libs/vcm.o .libs/vsite.o .libs/wall.o .libs/wnblist.o .libs/csettle.o .libs/clincs.o .libs/qmmm.o .libs/gmx_fft.o .libs/gmx_parallel_3dfft.o .libs/gmx_wallcycle.o .libs/qm_gaussian.o .libs/gmx_fft_fftw3.o -lgslcblas ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libmd.so.5 -o .libs/libmd.so.5.0.0 (cd .libs && rm -f libmd.so.5 && ln -s libmd.so.5.0.0 libmd.so.5) (cd .libs && rm -f libmd.so && ln -s libmd.so.5.0.0 libmd.so) creating libmd.la (cd .libs && rm -f libmd.la && ln -s ../libmd.la libmd.la) make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib' Making all in kernel make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/kernel' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o add_par.lo ../../../src/kernel/add_par.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o compute_io.lo ../../../src/kernel/compute_io.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o convparm.lo ../../../src/kernel/convparm.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gen_ad.lo ../../../src/kernel/gen_ad.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gen_vsite.lo ../../../src/kernel/gen_vsite.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genhydro.lo ../../../src/kernel/genhydro.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxcpp.lo ../../../src/kernel/gmxcpp.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gpp_atomtype.lo ../../../src/kernel/gpp_atomtype.c mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gen_ad.c -fPIC -DPIC -o .libs/gen_ad.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gpp_atomtype.c -fPIC -DPIC -o .libs/gpp_atomtype.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/add_par.c -fPIC -DPIC -o .libs/add_par.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gmxcpp.c -fPIC -DPIC -o .libs/gmxcpp.o In file included from ../../../src/kernel/topdirs.h:40:0, from ../../../src/kernel/gpp_atomtype.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/compute_io.c -fPIC -DPIC -o .libs/compute_io.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gen_vsite.c -fPIC -DPIC -o .libs/gen_vsite.o ../../../src/kernel/gen_ad.c: In function 'get_impropers': ../../../src/kernel/gen_ad.c:437:25: warning: unused variable 'r' [-Wunused-variable] int nidih,i,j,k,r,start,ninc,nalloc; ^ ../../../src/kernel/gen_ad.c:436:15: warning: unused variable 'hbidih' [-Wunused-variable] t_rbonded *hbidih; ^ ../../../src/kernel/gen_ad.c:434:14: warning: unused variable 'a0' [-Wunused-variable] char *a0; ^ ../../../src/kernel/gen_ad.c: In function 'clean_excls': ../../../src/kernel/gen_ad.c:576:26: warning: unused variable 'n' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e; ^ ../../../src/kernel/gen_ad.c:576:24: warning: unused variable 'm' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e; ^ ../../../src/kernel/gen_ad.c: In function 'generate_excls': ../../../src/kernel/gen_ad.c:618:28: warning: unused variable 'e' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:24: warning: unused variable 'm' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:21: warning: unused variable 'l1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:19: warning: unused variable 'l' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:16: warning: unused variable 'k1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/genhydro.c -fPIC -DPIC -o .libs/genhydro.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/convparm.c -fPIC -DPIC -o .libs/convparm.o ../../../src/kernel/gen_ad.c:618:14: warning: unused variable 'k' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:11: warning: unused variable 'j1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gen_ad.c:48: ../../../src/kernel/gen_ad.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gen_ad.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/gen_ad.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/gen_ad.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/gen_ad.c:51: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/gen_ad.c:57: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/gen_ad.c:114:13: warning: 'aeq' defined but not used [-Wunused-function] static bool aeq(t_param *p1, t_param *p2) ^ ../../../src/kernel/gen_ad.c:289:13: warning: 'ideq' defined but not used [-Wunused-function] static bool ideq(t_param *p1, t_param *p2) ^ ../../../src/kernel/gen_ad.c:327:13: warning: 'dump_param' defined but not used [-Wunused-function] static void dump_param(FILE *fp,char *title,int n,t_param ps[]) ^ In file included from ../../../src/kernel/add_par.c:44:0: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/add_par.c:46: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/compute_io.c: In function 'compute_io': ../../../src/kernel/compute_io.c:49:53: warning: unused variable 'nfep' [-Wunused-variable] int nstx=0,nstv=0,nstf=0,nste=0,nstlog=0,nstxtc=0,nfep=0; ^ ../../../src/kernel/gmxcpp.c: In function 'cpp_close_file': ../../../src/kernel/gmxcpp.c:453:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gpp_bond_atomtype.lo ../../../src/kernel/gpp_bond_atomtype.c ../../../src/kernel/convparm.c: In function 'new_interaction_list': ../../../src/kernel/convparm.c:404:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/convparm.c: In function 'convert_params': ../../../src/kernel/convparm.c:414:12: warning: unused variable 'j' [-Wunused-variable] int i,j,maxtypes,mt; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/convparm.c:44: ../../../src/kernel/convparm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/convparm.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/convparm.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/convparm.c:48: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/convparm.c:48: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/convparm.c:402:13: warning: 'new_interaction_list' defined but not used [-Wunused-function] static void new_interaction_list(t_ilist *ilist) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gpp_bond_atomtype.c -fPIC -DPIC -o .libs/gpp_bond_atomtype.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o h_db.lo ../../../src/kernel/h_db.c In file included from ../../../src/kernel/genhydro.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/genhydro.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/genhydro.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/genhydro.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/genhydro.h:40:0, from ../../../src/kernel/genhydro.c:56: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/genhydro.h:41, from ../../../src/kernel/genhydro.c:56: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/gen_vsite.c: In function 'read_vsite_database': ../../../src/kernel/gen_vsite.c:150:34: warning: unused variable 'prevdir' [-Wunused-variable] int i,j,n,k,nvsite,ntop,curdir,prevdir; ^ ../../../src/kernel/gen_vsite.c:150:9: warning: unused variable 'j' [-Wunused-variable] int i,j,n,k,nvsite,ntop,curdir,prevdir; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/h_db.c -fPIC -DPIC -o .libs/h_db.o ../../../src/kernel/gen_vsite.c: In function 'add_vsites': ../../../src/kernel/gen_vsite.c:477:33: warning: unused variable 'bb' [-Wunused-variable] int i,j,ftype,other,moreheavy,bb; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hackblock.lo ../../../src/kernel/hackblock.c ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_6ring': ../../../src/kernel/gen_vsite.c:560:32: warning: variable 'yCE2' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:27: warning: variable 'xCE2' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:22: warning: variable 'yCE1' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:17: warning: variable 'xCE1' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:13: warning: variable 'yCG' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c: In function 'calc_vsite3_param': ../../../src/kernel/gen_vsite.c:693:13: warning: variable 'b_ik' set but not used [-Wunused-but-set-variable] real b_ij,b_ik; ^ ../../../src/kernel/gen_vsite.c:693:8: warning: variable 'b_ij' set but not used [-Wunused-but-set-variable] real b_ij,b_ik; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_trp': ../../../src/kernel/gen_vsite.c:741:12: warning: unused variable 'c' [-Wunused-variable] real a,b,c[MAXFORCEPARAM]; ^ ../../../src/kernel/gen_vsite.c:740:14: warning: unused variable 'mtot' [-Wunused-variable] real mwtot,mtot,mM[NMASS],dCBM1,dCBM2,dM1M2; ^ ../../../src/kernel/gen_vsite.c:740:8: warning: unused variable 'mwtot' [-Wunused-variable] real mwtot,mtot,mM[NMASS],dCBM1,dCBM2,dM1M2; ^ ../../../src/kernel/gen_vsite.c:738:8: warning: unused variable 'xM' [-Wunused-variable] real xM[NMASS]; ^ ../../../src/kernel/gen_vsite.c:735:8: warning: variable 'a_CB_CG_CD1' set but not used [-Wunused-but-set-variable] real a_CB_CG_CD1,a_CD2_CG_CD1,a_CE2_CZ2_HZ2,a_CZ2_CH2_HH2; ^ ../../../src/kernel/gen_vsite.c:729:20: warning: unused variable 'dist' [-Wunused-variable] real lineA,lineB,dist; ^ ../../../src/kernel/gen_vsite.c:729:14: warning: variable 'lineB' set but not used [-Wunused-but-set-variable] real lineA,lineB,dist; ^ ../../../src/kernel/gen_vsite.c:728:32: warning: unused variable 'I' [-Wunused-variable] real xcom[NMASS],ycom[NMASS],I,alpha; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_tyr': ../../../src/kernel/gen_vsite.c:968:8: warning: unused variable 'vmass' [-Wunused-variable] real vmass,vdist,mM; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hizzie.lo ../../../src/kernel/hizzie.c ../../../src/kernel/gen_vsite.c: In function 'do_vsites': ../../../src/kernel/gen_vsite.c:1332:29: warning: unused variable 'bb' [-Wunused-variable] int Hatoms[4],heavies[4],bb; ^ In file included from ../../../src/kernel/gen_vsite.h:41:0, from ../../../src/kernel/gen_vsite.c:44: ../../../src/kernel/gen_vsite.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/gen_vsite.h:43, from ../../../src/kernel/gen_vsite.c:44: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gen_vsite.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gen_vsite.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/hackblock.c -fPIC -DPIC -o .libs/hackblock.o ../../../src/kernel/h_db.c: In function 'dump_h_db': ../../../src/kernel/h_db.c:113:10: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/h_db.h:41, from ../../../src/kernel/h_db.c:47: ../../../src/kernel/h_db.c: At top level: In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/hackblock.c:42: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/hackblock.c:42: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/hackblock.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/h_db.h:41, from ../../../src/kernel/h_db.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdb2top.lo ../../../src/kernel/pdb2top.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/hizzie.c -fPIC -DPIC -o .libs/hizzie.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pgutil.lo ../../../src/kernel/pgutil.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readir.lo ../../../src/kernel/readir.c ../../../src/kernel/hizzie.c: In function 'set_histp': ../../../src/kernel/hizzie.c:195:8: warning: unused variable 'd' [-Wunused-variable] real d; ^ ../../../src/kernel/hizzie.c:192:27: warning: unused variable 'his0' [-Wunused-variable] int i,j,nd,na,aj,hisnr,his0,type=-1; ^ ../../../src/kernel/hizzie.c:192:18: warning: unused variable 'aj' [-Wunused-variable] int i,j,nd,na,aj,hisnr,his0,type=-1; ^ ../../../src/kernel/hizzie.c:188:15: warning: unused variable 'bHaveH' [-Wunused-variable] bool *hbond,bHaveH=FALSE; ^ In file included from ../../../src/kernel/hizzie.c:44:0: ../../../src/kernel/hizzie.c: At top level: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/pdb2top.c -fPIC -DPIC -o .libs/pdb2top.o ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/hizzie.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/hizzie.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/hizzie.c:48: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/pgutil.c -fPIC -DPIC -o .libs/pgutil.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readpull.lo ../../../src/kernel/readpull.c ../../../src/kernel/pdb2top.c: In function 'missing_atoms': ../../../src/kernel/pdb2top.c:75:16: warning: unused variable 'bRet' [-Wunused-variable] bool bFound, bRet; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/readir.c -fPIC -DPIC -o .libs/readir.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o resall.lo ../../../src/kernel/resall.c In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/pdb2top.c:43: ../../../src/kernel/pdb2top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/pdb2top.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/pdb2top.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/kernel/pdb2top.h:41:0, from ../../../src/kernel/pdb2top.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/pdb2top.c:50: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/pdb2top.c:57: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/pdb2top.c:57: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorting.lo ../../../src/kernel/sorting.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/readpull.c -fPIC -DPIC -o .libs/readpull.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o specbond.lo ../../../src/kernel/specbond.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/sorting.c -fPIC -DPIC -o .libs/sorting.o ../../../src/kernel/readpull.c: In function 'read_pullparams': ../../../src/kernel/readpull.c:102:22: warning: unused variable 'nchar' [-Wunused-variable] int ninp,nerror,i,nchar,ndim,nscan,m; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/readpull.c:45: ../../../src/kernel/readpull.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/readpull.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/readpull.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/readpull.c:54: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readpull.c:54:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ter_db.lo ../../../src/kernel/ter_db.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/specbond.c -fPIC -DPIC -o .libs/specbond.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/resall.c -fPIC -DPIC -o .libs/resall.o In file included from ../../../src/kernel/specbond.c:43:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/pdb2top.h:41:0, from ../../../src/kernel/specbond.h:40, from ../../../src/kernel/specbond.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/specbond.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/specbond.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/resall.c:49: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/resall.c:49: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/readir.c: In function 'do_index': ../../../src/kernel/readir.c:1427:38: warning: variable 'nbTS' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:32: warning: variable 'nbOPT' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:18: warning: variable 'nSAsteps' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:11: warning: variable 'nSAoff' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:5: warning: variable 'nSAon' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1426:61: warning: variable 'nCASelec' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:53: warning: variable 'nCASorb' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:48: warning: variable 'nbSH' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:40: warning: variable 'nQMmult' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:30: warning: variable 'nQMcharge' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1424:11: warning: unused variable 'SAtime' [-Wunused-variable] real SAtime; ^ ../../../src/kernel/readir.c: In function 'triple_check': ../../../src/kernel/readir.c:1872:17: warning: unused variable 'npct' [-Wunused-variable] int i,m,nmol,npct; ^ In file included from ../../../src/kernel/readir.c:53:0: ../../../src/kernel/readir.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/readir.c:54: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/readir.c:58: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/readir.c:58:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tomorse.lo ../../../src/kernel/tomorse.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/ter_db.c -fPIC -DPIC -o .libs/ter_db.o ../../../src/kernel/ter_db.c: In function 'print_ter_db': ../../../src/kernel/ter_db.c:105:20: warning: unused variable 'nname' [-Wunused-variable] char buf[STRLEN],nname[STRLEN]; ^ ../../../src/kernel/ter_db.c: In function 'filter_ter': ../../../src/kernel/ter_db.c:301:12: warning: unused variable 's2' [-Wunused-variable] char *s,*s2,*c; ^ ../../../src/kernel/ter_db.c:299:13: warning: unused variable 'len' [-Wunused-variable] int i,j,n,len,none_idx; ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/ter_db.c:45: ../../../src/kernel/ter_db.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/ter_db.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topdirs.lo ../../../src/kernel/topdirs.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/tomorse.c -fPIC -DPIC -o .libs/tomorse.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topexcl.lo ../../../src/kernel/topexcl.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topio.lo ../../../src/kernel/topio.c In file included from ../../../src/kernel/tomorse.c:46:0: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topdirs.c -fPIC -DPIC -o .libs/topdirs.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topio.c -fPIC -DPIC -o .libs/topio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o toppush.lo ../../../src/kernel/toppush.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topexcl.c -fPIC -DPIC -o .libs/topexcl.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topshake.lo ../../../src/kernel/topshake.c In file included from ../../../include/gpp_nextnb.h:40:0, from ../../../src/kernel/topexcl.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/topio.c: In function 'read_topol': ../../../src/kernel/topio.c:314:15: warning: unused variable 'block' [-Wunused-variable] t_topology *block=NULL; ^ In file included from ../../../src/kernel/vsite_parm.h:41:0, from ../../../src/kernel/topio.c:59: ../../../src/kernel/topio.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/topio.c:66: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/topio.c:66: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/toppush.c -fPIC -DPIC -o .libs/toppush.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o toputil.lo ../../../src/kernel/toputil.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topshake.c -fPIC -DPIC -o .libs/topshake.o ../../../src/kernel/toppush.c: In function 'push_bt': ../../../src/kernel/toppush.c:573:37: warning: variable 'nrfpB' set but not used [-Wunused-but-set-variable] int i,ft,ftype,nn,nrfp,nrfpA,nrfpB; ^ ../../../src/kernel/toppush.c: In function 'push_dihedraltype': ../../../src/kernel/toppush.c:661:37: warning: variable 'nrfpB' set but not used [-Wunused-but-set-variable] int i,ft,ftype,nn,nrfp,nrfpA,nrfpB,nral; ^ ../../../src/kernel/toppush.c: In function 'push_nbt': ../../../src/kernel/toppush.c:778:17: warning: unused variable 'sig6' [-Wunused-variable] real cr[4],sig6; ^ ../../../src/kernel/toppush.c:776:23: warning: unused variable 'atnr' [-Wunused-variable] int i,f,n,ftype,atnr,nrfp; ^ ../../../src/kernel/toppush.c: In function 'push_atom_now': ../../../src/kernel/toppush.c:871:7: warning: unused variable 'j' [-Wunused-variable] int j,resnr_diff=-1; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/toputil.c -fPIC -DPIC -o .libs/toputil.o ../../../src/kernel/toppush.c: In function 'push_bond': ../../../src/kernel/toppush.c:1234:18: warning: unused variable 'paramB' [-Wunused-variable] t_param param,paramB,*param_defA,*param_defB; ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.c:48: ../../../src/kernel/toppush.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/toppush.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/toppush.c:51:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpbcmp.lo ../../../src/kernel/tpbcmp.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vsite_parm.lo ../../../src/kernel/vsite_parm.c ../../../src/kernel/topshake.c: In function 'make_shake': ../../../src/kernel/topshake.c:98:19: warning: unused variable 'b' [-Wunused-variable] int nb,b,i,j,ftype,ftype_a; ^ ../../../src/kernel/topshake.c:98:16: warning: unused variable 'nb' [-Wunused-variable] int nb,b,i,j,ftype,ftype_a; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topshake.c:46: ../../../src/kernel/topshake.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/topshake.c:46: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/topshake.c:46:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/topdirs.h:40:0, from ../../../src/kernel/toputil.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/toputil.c:135:13: warning: 'print_nbt' defined but not used [-Wunused-function] static void print_nbt (FILE *out,char *title,t_atomtype at, ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/tpbcmp.c -fPIC -DPIC -o .libs/tpbcmp.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/vsite_parm.c -fPIC -DPIC -o .libs/vsite_parm.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xlate.lo ../../../src/kernel/xlate.c ../../../src/kernel/tpbcmp.c: In function 'cmp_block': ../../../src/kernel/tpbcmp.c:242:11: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:242:9: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:242:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_blocka': ../../../src/kernel/tpbcmp.c:252:11: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:252:9: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:252:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_atom': ../../../src/kernel/tpbcmp.c:265:8: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ ../../../src/kernel/tpbcmp.c:264:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_top': ../../../src/kernel/tpbcmp.c:302:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/tpbcmp.c: In function 'comp_tpx': ../../../src/kernel/tpbcmp.c:567:15: warning: unused variable 'sh' [-Wunused-variable] t_tpxheader sh[2]; ^ ../../../src/kernel/tpbcmp.c: In function 'comp_enx': ../../../src/kernel/tpbcmp.c:723:38: warning: unused variable 'buf' [-Wunused-variable] char **enm1=NULL,**enm2=NULL,buf[256]; ^ ../../../src/kernel/tpbcmp.c:721:36: warning: unused variable 'block' [-Wunused-variable] int in1,in2,nre,nre1,nre2,block; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/tpbcmp.c:48: ../../../src/kernel/tpbcmp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/tpbcmp.c:77:13: warning: 'cmp_uc' defined but not used [-Wunused-function] static void cmp_uc(FILE *fp,char *s,int index,unsigned char i1,unsigned char i2) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/xlate.c -fPIC -DPIC -o .libs/xlate.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o grompp.o ../../../src/kernel/grompp.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o glaasje.o ../../../src/kernel/glaasje.c ../../../src/kernel/grompp.c: In function 'new_status': ../../../src/kernel/grompp.c:300:3: warning: statement with no effect [-Wunused-value] mbs; ^ ../../../src/kernel/grompp.c: In function 'read_posres': ../../../src/kernel/grompp.c:478:10: warning: unused variable 'bFirst' [-Wunused-variable] bool bFirst = TRUE; ^ ../../../src/kernel/grompp.c: In function 'gen_posres': ../../../src/kernel/grompp.c:604:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/kernel/grompp.c:604:7: warning: unused variable 'i' [-Wunused-variable] int i,j; ^ ../../../src/kernel/grompp.c: In function 'main': ../../../src/kernel/grompp.c:769:16: warning: unused variable 'natoms' [-Wunused-variable] int natoms,nvsite,comb,mt; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/grompp.c:50: ../../../src/kernel/grompp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/grompp.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/grompp.c:50:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/grompp.c:54:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/grompp.c:60: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/grompp.c:60:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/add_par.h:41, from ../../../src/kernel/grompp.c:74: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/glaasje.c: In function 'do_glas': ../../../src/kernel/glaasje.c:55:40: warning: unused variable 'r3' [-Wunused-variable] real wd,wdd,zi,fz,dd,d10,d4,d9,d3,r9,r3,sign,cc6,cc12; ^ ../../../src/kernel/glaasje.c:55:37: warning: unused variable 'r9' [-Wunused-variable] real wd,wdd,zi,fz,dd,d10,d4,d9,d3,r9,r3,sign,cc6,cc12; ^ In file included from ../../../src/kernel/glaasje.c:44:0: ../../../src/kernel/glaasje.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_bonds': ../../../src/kernel/vsite_parm.c:862:62: warning: unused variable 'vsitetype' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:862:30: warning: unused variable 'l' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:862:22: warning: unused variable 'parnr' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_angles': ../../../src/kernel/vsite_parm.c:1035:51: warning: unused variable 'vsitetype' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:1035:24: warning: unused variable 'l' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:1035:16: warning: unused variable 'parnr' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_dihs': ../../../src/kernel/vsite_parm.c:1130:28: warning: unused variable 'l' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ ../../../src/kernel/vsite_parm.c:1130:20: warning: unused variable 'parnr' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ ../../../src/kernel/vsite_parm.c:1130:12: warning: unused variable 'ftype' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ In file included from ../../../src/kernel/vsite_parm.h:41:0, from ../../../src/kernel/vsite_parm.c:43: ../../../src/kernel/vsite_parm.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/vsite_parm.c:45: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/vsite_parm.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/vsite_parm.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gctio.o ../../../src/kernel/gctio.c In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/gctio.c:41: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/kernel/gctio.c:49:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ionize.o ../../../src/kernel/ionize.c In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/ionize.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/ionize.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_gct.o ../../../src/kernel/do_gct.c ../../../src/kernel/do_gct.c: In function 'init_coupling': ../../../src/kernel/do_gct.c:63:19: warning: unused variable 'atj' [-Wunused-variable] int ati,atj; ^ ../../../src/kernel/do_gct.c:63:15: warning: unused variable 'ati' [-Wunused-variable] int ati,atj; ^ ../../../src/kernel/do_gct.c:62:26: warning: unused variable 'j' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:20: warning: unused variable 'index' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:17: warning: unused variable 'nc' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:15: warning: unused variable 'i' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c: In function 'gprod': ../../../src/kernel/do_gct.c:343:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/do_gct.c: In function 'do_coupling': ../../../src/kernel/do_gct.c:489:15: warning: unused variable 'bTest' [-Wunused-variable] bool bTest,bPrint; ^ ../../../src/kernel/do_gct.c:487:59: warning: unused variable 'xi12' [-Wunused-variable] real Epol,Eintern,Virial,muabs,xiH=-1,xiS=-1,xi6,xi12; ^ ../../../src/kernel/do_gct.c:487:55: warning: unused variable 'xi6' [-Wunused-variable] real Epol,Eintern,Virial,muabs,xiH=-1,xiS=-1,xi6,xi12; ^ ../../../src/kernel/do_gct.c:486:32: warning: unused variable 'ffc' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:486:28: warning: unused variable 'ffb' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:486:24: warning: unused variable 'ffa' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:485:60: warning: unused variable 'rmsf' [-Wunused-variable] real deviation[eoObsNR],prdev[eoObsNR],epot0,dist,rmsf; ^ In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/do_gct.c:41: ../../../src/kernel/do_gct.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/kernel/do_gct.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/kernel/do_gct.c:48: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/do_gct.c:50:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/do_gct.c:457:13: warning: 'dump_fm' defined but not used [-Wunused-function] static void dump_fm(FILE *fp,int n,real f[],char *s) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o repl_ex.o ../../../src/kernel/repl_ex.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xutils.o ../../../src/kernel/xutils.c ../../../src/kernel/repl_ex.c: In function 'init_replica_exchange': ../../../src/kernel/repl_ex.c:111:8: warning: unused variable 'temp' [-Wunused-variable] real temp,pres; ^ ../../../src/kernel/repl_ex.c: In function 'replica_exchange': ../../../src/kernel/repl_ex.c:560:20: warning: unused variable 'shift' [-Wunused-variable] int exchange=-1,shift; ^ In file included from ../../../src/kernel/repl_ex.c:46:0: ../../../src/kernel/repl_ex.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/repl_ex.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/repl_ex.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/repl_ex.c:544:13: warning: 'write_debug_x' defined but not used [-Wunused-function] static void write_debug_x(t_state *state) ^ ../../../src/kernel/xutils.c: In function 'calc_mu_aver': ../../../src/kernel/xutils.c:65:19: warning: variable 'end' set but not used [-Wunused-but-set-variable] int i,start,end; ^ ../../../src/kernel/xutils.c: In function 'update_forcefield': ../../../src/kernel/xutils.c:335:10: warning: unused variable 'bDone' [-Wunused-variable] bool bDone; ^ In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/xutils.c:44: ../../../src/kernel/xutils.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/xutils.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/xutils.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o md.o ../../../src/kernel/md.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdrun.o ../../../src/kernel/mdrun.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genalg.o ../../../src/kernel/genalg.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpbconv.o ../../../src/kernel/tpbconv.c ../../../src/kernel/tpbconv.c: In function 'main': ../../../src/kernel/tpbconv.c:365:7: warning: unused variable 'nerror' [-Wunused-variable] int nerror = 0; ^ ../../../src/kernel/tpbconv.c:325:17: warning: unused variable 'gopts' [-Wunused-variable] t_gromppopts *gopts; ^ ../../../src/kernel/tpbconv.c:324:21: warning: unused variable 'irnew' [-Wunused-variable] t_inputrec *ir,*irnew=NULL; ^ ../../../src/kernel/tpbconv.c:318:33: warning: unused variable 'nsteps_org' [-Wunused-variable] int i,frame,run_step,nsteps_org; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/tpbconv.c:52: ../../../src/kernel/tpbconv.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/tpbconv.c:52: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/tpbconv.c:52:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/tpbconv.c:54:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/tpbconv.c:56: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/tpbconv.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/md.c: In function 'mdrunner': ../../../src/kernel/md.c:140:15: warning: unused variable 'gro' [-Wunused-variable] char *gro; ^ ../../../src/kernel/md.c:139:45: warning: unused variable 'nalloc' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:139:16: warning: unused variable 'm' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:139:14: warning: unused variable 'i' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:128:20: warning: unused variable 'tmpr2' [-Wunused-variable] real tmpr1,tmpr2; ^ ../../../src/kernel/md.c:128:14: warning: unused variable 'tmpr1' [-Wunused-variable] real tmpr1,tmpr2; ^ ../../../src/kernel/md.c: In function 'do_md': ../../../src/kernel/md.c:533:16: warning: unused variable 'grpname' [-Wunused-variable] char *grpname; ^ ../../../src/kernel/md.c:525:15: warning: unused variable 'timestep' [-Wunused-variable] real timestep=0; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/md.c:45: ../../../src/kernel/md.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/md.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/md.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/kernel/md.c:69: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdb2gmx.o ../../../src/kernel/pdb2gmx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o protonate.o ../../../src/kernel/protonate.c ../../../src/kernel/mdrun.c: In function 'main': ../../../src/kernel/mdrun.c:387:20: warning: unused variable 'fptest' [-Wunused-variable] FILE *fplog,*fptest; ^ ../../../src/kernel/mdrun.c:386:12: warning: unused variable 'HaveCheckpoint' [-Wunused-variable] bool HaveCheckpoint; ^ ../../../src/kernel/mdrun.c:285:15: warning: unused variable 'bPPPME' [-Wunused-variable] static bool bPPPME = FALSE; ^ ../../../src/kernel/mdrun.c:284:15: warning: unused variable 'bCart' [-Wunused-variable] static bool bCart = FALSE; ^ In file included from ../../../src/kernel/mdrun.c:42:0: ../../../src/kernel/mdrun.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/mdrun.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/kernel/mdrun.c:49: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/kernel/mdrun.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/kernel/mdrun.c:49: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/protonate.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/protonate.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/genhydro.h:40:0, from ../../../src/kernel/protonate.c:47: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/genhydro.h:41, from ../../../src/kernel/protonate.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/protonate.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/protonate.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o luck.o ../../../src/kernel/luck.c ../../../src/kernel/genalg.c: In function 'update_ga': ../../../src/kernel/genalg.c:197:12: warning: unused variable 'j' [-Wunused-variable] int i, j, L, n; /* counting variables */ ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/genalg.c:75: ../../../src/kernel/genalg.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/genalg.c:75:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/luck.c:41:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/luck.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxdump.o ../../../src/kernel/gmxdump.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxcheck.o ../../../src/kernel/gmxcheck.c ../../../src/kernel/gmxdump.c: In function 'list_tpx': ../../../src/kernel/gmxdump.c:146:16: warning: left-hand operand of comma expression has no effect [-Wunused-value] if (state,tpx.bF) { ^ ../../../src/kernel/gmxdump.c:99:20: warning: unused variable 'fp' [-Wunused-variable] int step,fp,indent,i,j,**gcount,atot; ^ ../../../src/kernel/gmxdump.c: In function 'list_ene': ../../../src/kernel/gmxdump.c:314:17: warning: unused variable 'ndr' [-Wunused-variable] int in,ndr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/gmxdump.c:46: ../../../src/kernel/gmxdump.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/gmxdump.c:47:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/kernel/gmxdump.c:65:13: warning: 'dump_top' defined but not used [-Wunused-function] static void dump_top(FILE *fp,t_topology *top,char *tpr) ^ ../../../src/kernel/gmxcheck.c: In function 'tpx2system': ../../../src/kernel/gmxcheck.c:90:7: warning: unused variable 'i' [-Wunused-variable] int i,nmol,nvsite=0; ^ ../../../src/kernel/gmxcheck.c: In function 'tpx2methods': ../../../src/kernel/gmxcheck.c:140:15: warning: unused variable 'i' [-Wunused-variable] int i,step; ^ ../../../src/kernel/gmxcheck.c:136:15: warning: unused variable 'sh' [-Wunused-variable] t_tpxheader sh; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_bonds': ../../../src/kernel/gmxcheck.c:202:26: warning: variable 'devtot' set but not used [-Wunused-but-set-variable] real b0,blen,deviation,devtot; ^ ../../../src/kernel/gmxcheck.c:201:14: warning: unused variable 'i' [-Wunused-variable] int ftype,i,k,ai,aj,type; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_trj': ../../../src/kernel/gmxcheck.c:252:35: warning: unused variable 'bOK' [-Wunused-variable] bool bShowTimestep=TRUE,bOK,newline=FALSE; ^ ../../../src/kernel/gmxcheck.c:251:40: warning: unused variable 'prec' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:251:23: warning: unused variable 'tt' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:251:16: warning: unused variable 'rdum' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:250:16: warning: variable 'fpos' set but not used [-Wunused-but-set-variable] off_t fpos; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_ndx': ../../../src/kernel/gmxcheck.c:526:10: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_enx': ../../../src/kernel/gmxcheck.c:550:25: warning: unused variable 'ndr' [-Wunused-variable] int in,nre,fnr,ndr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/gmxcheck.c:47: ../../../src/kernel/gmxcheck.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/gmxcheck.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gmxcheck.c:57: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gmxcheck.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o x2top.o ../../../src/kernel/x2top.c ../../../src/kernel/x2top.c: In function 'set_cgnr': ../../../src/kernel/x2top.c:178:15: warning: unused variable 'mt' [-Wunused-variable] double qt=0,mt=0; ^ ../../../src/kernel/x2top.c: In function 'set_force_const': ../../../src/kernel/x2top.c:255:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/x2top.c: In function 'main': ../../../src/kernel/x2top.c:419:15: warning: unused variable 'scale' [-Wunused-variable] static real scale = 1.1, kb = 4e5,kt = 400,kp = 5; ^ ../../../src/kernel/x2top.c:411:14: warning: unused variable 'cutoff' [-Wunused-variable] real cutoff,qtot,mtot; ^ ../../../src/kernel/x2top.c:408:24: warning: unused variable 'ndih' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:22: warning: unused variable 'm' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:20: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:18: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:16: warning: unused variable 'j' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:14: warning: unused variable 'i' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:407:14: warning: unused variable 'nres' [-Wunused-variable] int nres; /* number of molecules? */ ^ In file included from ../../../src/kernel/x2top.c:40:0: ../../../src/kernel/x2top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/x2top.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/x2top.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/x2top.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.h:41, from ../../../src/kernel/x2top.c:58: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/x2top.c:59: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/gen_ad.h:42, from ../../../src/kernel/x2top.c:60: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/x2top.c:80:13: warning: 'set_x_blen' defined but not used [-Wunused-function] static real set_x_blen(real scale) ^ ../../../src/kernel/x2top.c:117:12: warning: 'get_atype' defined but not used [-Wunused-function] static int get_atype(char *nm) ^ In file included from ../../../src/kernel/pdb2gmx.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/pdb2gmx.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/pdb2gmx.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/pdb2gmx.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/pdb2gmx.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/pdb2gmx.c:55: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/pdb2gmx.c:149:20: warning: 'get_cystp' defined but not used [-Wunused-function] static const char *get_cystp(int resnr) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nm2type.o ../../../src/kernel/nm2type.c /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libgmxpreprocess.la add_par.lo compute_io.lo convparm.lo gen_ad.lo gen_vsite.lo genhydro.lo gmxcpp.lo gpp_atomtype.lo gpp_bond_atomtype.lo h_db.lo hackblock.lo hizzie.lo pdb2top.lo pgutil.lo readir.lo readpull.lo resall.lo sorting.lo specbond.lo ter_db.lo tomorse.lo topdirs.lo topexcl.lo topio.lo toppush.lo topshake.lo toputil.lo tpbcmp.lo vsite_parm.lo xlate.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ../../../src/kernel/nm2type.c: In function 'rd_nm2type': ../../../src/kernel/nm2type.c:72:20: warning: unused variable 'blen' [-Wunused-variable] double qq,mm,*blen; ^ ../../../src/kernel/nm2type.c: In function 'nm2type': ../../../src/kernel/nm2type.c:160:38: warning: unused variable 'quality' [-Wunused-variable] int *bbb,*n_mask,*m_mask,**match,**quality; ^ In file included from ../../../src/kernel/nm2type.c:42:0: ../../../src/kernel/nm2type.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/nm2type.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/nm2type.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/nm2type.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.h:41, from ../../../src/kernel/nm2type.c:58: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/nm2type.c:59: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ar cru .libs/libgmxpreprocess.a .libs/add_par.o .libs/compute_io.o .libs/convparm.o .libs/gen_ad.o .libs/gen_vsite.o .libs/genhydro.o .libs/gmxcpp.o .libs/gpp_atomtype.o .libs/gpp_bond_atomtype.o .libs/h_db.o .libs/hackblock.o .libs/hizzie.o .libs/pdb2top.o .libs/pgutil.o .libs/readir.o .libs/readpull.o .libs/resall.o .libs/sorting.o .libs/specbond.o .libs/ter_db.o .libs/tomorse.o .libs/topdirs.o .libs/topexcl.o .libs/topio.o .libs/toppush.o .libs/topshake.o .libs/toputil.o .libs/tpbcmp.o .libs/vsite_parm.o .libs/xlate.o ranlib .libs/libgmxpreprocess.a creating libgmxpreprocess.la (cd .libs && rm -f libgmxpreprocess.la && ln -s ../libgmxpreprocess.la libgmxpreprocess.la) /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o grompp grompp.o libgmxpreprocess.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o tpbconv tpbconv.o libgmxpreprocess.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o protonate protonate.o libgmxpreprocess.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o luck luck.o libgmxpreprocess.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o gmxdump gmxdump.o libgmxpreprocess.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o gmxcheck gmxcheck.o libgmxpreprocess.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o x2top x2top.o nm2type.o libgmxpreprocess.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o mdrun glaasje.o gctio.o ionize.o do_gct.o repl_ex.o xutils.o md.o mdrun.o genalg.o libgmxpreprocess.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/grompp grompp.o ./.libs/libgmxpreprocess.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/tpbconv tpbconv.o ./.libs/libgmxpreprocess.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/gmxdump gmxdump.o ./.libs/libgmxpreprocess.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/luck luck.o ./.libs/libgmxpreprocess.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/protonate protonate.o ./.libs/libgmxpreprocess.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating tpbconv DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/gmxcheck gmxcheck.o ./.libs/libgmxpreprocess.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o pdb2gmx pdb2gmx.o libgmxpreprocess.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath creating grompp creating protonate creating gmxdump creating luck creating gmxcheck DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/x2top x2top.o nm2type.o ./.libs/libgmxpreprocess.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/mdrun glaasje.o gctio.o ionize.o do_gct.o repl_ex.o xutils.o md.o mdrun.o genalg.o ./.libs/libgmxpreprocess.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating x2top creating mdrun DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/pdb2gmx pdb2gmx.o ./.libs/libgmxpreprocess.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating pdb2gmx make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/kernel' Making all in tools make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/tools' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o autocorr.lo ../../../src/tools/autocorr.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o expfit.lo ../../../src/tools/expfit.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o polynomials.lo ../../../src/tools/polynomials.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o levenmar.lo ../../../src/tools/levenmar.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o anadih.lo ../../../src/tools/anadih.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pp2shift.lo ../../../src/tools/pp2shift.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlist.lo ../../../src/tools/dlist.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eigio.lo ../../../src/tools/eigio.c mkdir .libs mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/pp2shift.c -fPIC -DPIC -o .libs/pp2shift.o mkdir: cannot create directory '.libs': File exists x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/anadih.c -fPIC -DPIC -o .libs/anadih.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/expfit.c -fPIC -DPIC -o .libs/expfit.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/polynomials.c -fPIC -DPIC -o .libs/polynomials.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/anadih.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/anadih.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/anadih.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/pp2shift.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/pp2shift.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/eigio.c -fPIC -DPIC -o .libs/eigio.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/expfit.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/expfit.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/expfit.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/levenmar.c -fPIC -DPIC -o .libs/levenmar.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/autocorr.c -fPIC -DPIC -o .libs/autocorr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/dlist.c -fPIC -DPIC -o .libs/dlist.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/polynomials.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/dlist.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/levenmar.c:78:16: warning: 'dvector' defined but not used [-Wunused-function] static double *dvector(int nl, int nh) ^ ../../../src/tools/levenmar.c:106:17: warning: 'dmatrix' defined but not used [-Wunused-function] static double **dmatrix(int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:123:14: warning: 'imatrix1' defined but not used [-Wunused-function] static int **imatrix1(int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:141:15: warning: 'submatrix' defined but not used [-Wunused-function] static real **submatrix(real **a, int oldrl, int oldrh, int oldcl, ^ ../../../src/tools/levenmar.c:168:13: warning: 'free_dvector' defined but not used [-Wunused-function] static void free_dvector(int *v, int nl) ^ ../../../src/tools/levenmar.c:183:13: warning: 'free_dmatrix' defined but not used [-Wunused-function] static void free_dmatrix(double **m, int nrl, int nrh, int ncl) ^ ../../../src/tools/levenmar.c:191:13: warning: 'free_imatrix' defined but not used [-Wunused-function] static void free_imatrix(int **m, int nrl, int nrh, int ncl) ^ ../../../src/tools/levenmar.c:201:13: warning: 'free_submatrix' defined but not used [-Wunused-function] static void free_submatrix(real **b, int nrl) ^ ../../../src/tools/levenmar.c:208:15: warning: 'convert_matrix' defined but not used [-Wunused-function] static real **convert_matrix(real *a, int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:224:13: warning: 'free_convert_matrix' defined but not used [-Wunused-function] static void free_convert_matrix(real **b, int nrl) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o lsq.lo ../../../src/tools/lsq.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/eigio.c:41: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/eigio.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/autocorr.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/autocorr.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/autocorr.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.h:40, from ../../../src/tools/autocorr.c:53: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o cmat.lo ../../../src/tools/cmat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/lsq.c -fPIC -DPIC -o .libs/lsq.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/cmat.c -fPIC -DPIC -o .libs/cmat.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eigensolver.lo ../../../src/tools/eigensolver.c In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/lsq.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/lsq.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/lsq.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nsc.lo ../../../src/tools/nsc.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hxprops.lo ../../../src/tools/hxprops.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fitahx.lo ../../../src/tools/fitahx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/eigensolver.c -fPIC -DPIC -o .libs/eigensolver.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/nsc.c -fPIC -DPIC -o .libs/nsc.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/hxprops.c -fPIC -DPIC -o .libs/hxprops.o ../../../src/tools/eigensolver.c: In function 'eigensolver': ../../../src/tools/eigensolver.c:65:16: warning: unused variable 'iu' [-Wunused-variable] int il,iu,m,iw0,info; ^ ../../../src/tools/eigensolver.c:65:13: warning: unused variable 'il' [-Wunused-variable] int il,iu,m,iw0,info; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/fitahx.c -fPIC -DPIC -o .libs/fitahx.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/fitahx.c:41: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/fitahx.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_analyze.lo ../../../src/tools/gmx_analyze.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_anaeig.lo ../../../src/tools/gmx_anaeig.c ../../../src/tools/hxprops.c: In function 'ellipticity': ../../../src/tools/hxprops.c:85:14: warning: unused variable 'Xi' [-Wunused-variable] const real Xi=1.0; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_analyze.c -fPIC -DPIC -o .libs/gmx_analyze.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/hxprops.c:46: ../../../src/tools/hxprops.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/hxprops.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_angle.lo ../../../src/tools/gmx_angle.c ../../../src/tools/gmx_analyze.c: In function 'luzar_correl': ../../../src/tools/gmx_analyze.c:514:8: warning: unused variable 'weight' [-Wunused-variable] real weight,d2; ^ ../../../src/tools/gmx_analyze.c:512:14: warning: unused variable 'tol' [-Wunused-variable] const real tol = 1e-8; ^ ../../../src/tools/gmx_analyze.c: In function 'gmx_analyze': ../../../src/tools/gmx_analyze.c:744:63: warning: unused variable 'bLuzarError' [-Wunused-variable] static bool bIntegrate=FALSE,bRegression=FALSE,bLuzar=FALSE,bLuzarError=FALSE; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_analyze.c:41: ../../../src/tools/gmx_analyze.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_analyze.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_analyze.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_analyze.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_analyze.c:273:13: warning: 'anal_ee' defined but not used [-Wunused-function] static real anal_ee(real *parm,real T,real t) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_anaeig.c -fPIC -DPIC -o .libs/gmx_anaeig.o ../../../src/tools/nsc.c: In function 'nsc_dclm_pbc': ../../../src/tools/nsc.c:652:21: warning: unused variable 'm' [-Wunused-variable] int ix,iy,iz,m; ^ ../../../src/tools/nsc.c:551:16: warning: unused variable 'jat_xx' [-Wunused-variable] int iat_xx,jat_xx; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/nsc.c:48: ../../../src/tools/nsc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/nsc.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_bond.lo ../../../src/tools/gmx_bond.c ../../../src/tools/gmx_anaeig.c: In function 'calc_entropy_schlitter': ../../../src/tools/gmx_anaeig.c:98:10: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ ../../../src/tools/gmx_anaeig.c:97:16: warning: unused variable 'm' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:97:14: warning: unused variable 'k' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:97:12: warning: unused variable 'j' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:96:11: warning: unused variable 'indx' [-Wunused-variable] int *indx; ^ ../../../src/tools/gmx_anaeig.c: In function 'compare': ../../../src/tools/gmx_anaeig.c:224:12: warning: unused variable 'nrow' [-Wunused-variable] int n,nrow; ^ ../../../src/tools/gmx_anaeig.c: In function 'rmsf': ../../../src/tools/gmx_anaeig.c:692:9: warning: unused variable 'nrow' [-Wunused-variable] int nrow,g,v,i; ^ ../../../src/tools/gmx_anaeig.c: In function 'gmx_anaeig': ../../../src/tools/gmx_anaeig.c:835:21: warning: unused variable 'step' [-Wunused-variable] int natoms,step; ^ ../../../src/tools/gmx_anaeig.c:834:42: warning: unused variable 'lambda' [-Wunused-variable] real xid,totmass,*sqrtm,*w_rls,t,lambda; ^ ../../../src/tools/gmx_anaeig.c:834:14: warning: unused variable 'xid' [-Wunused-variable] real xid,totmass,*sqrtm,*w_rls,t,lambda; ^ ../../../src/tools/gmx_anaeig.c:832:18: warning: unused variable 'xread' [-Wunused-variable] rvec *x,*xread,*xav1,*xav2,**eigvec1=NULL,**eigvec2=NULL; ^ ../../../src/tools/gmx_anaeig.c:832:15: warning: unused variable 'x' [-Wunused-variable] rvec *x,*xread,*xav1,*xav2,**eigvec1=NULL,**eigvec2=NULL; ^ ../../../src/tools/gmx_anaeig.c:825:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_anaeig.c:825:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_anaeig.c:824:15: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_angle.c -fPIC -DPIC -o .libs/gmx_angle.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_anaeig.c:41: ../../../src/tools/gmx_anaeig.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_anaeig.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_anaeig.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_anaeig.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_anaeig.c:53:0: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/tools/gmx_angle.c: In function 'gmx_angle': ../../../src/tools/gmx_angle.c:147:14: warning: unused variable 'buf' [-Wunused-variable] char buf[80]; ^ ../../../src/tools/gmx_angle.c:143:38: warning: unused variable 'fraction' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:143:16: warning: unused variable 'aa' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:143:14: warning: unused variable 't' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:138:55: warning: unused variable 'angind' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:39: warning: unused variable 'nat2' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:32: warning: unused variable 'natoms' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:18: warning: unused variable 'total' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:135:21: warning: unused variable 'Jc' [-Wunused-variable] real maxang,Jc,S2,norm_fac,maxstat; ^ ../../../src/tools/gmx_angle.c:132:14: warning: unused variable 'status' [-Wunused-variable] int status,isize; ^ ../../../src/tools/gmx_angle.c:131:14: warning: unused variable 'tmp' [-Wunused-variable] real tmp,dt; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_angle.c:47: ../../../src/tools/gmx_angle.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_angle.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_angle.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_angle.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_bond.c -fPIC -DPIC -o .libs/gmx_bond.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_bundle.lo ../../../src/tools/gmx_bundle.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_chi.lo ../../../src/tools/gmx_chi.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_bond.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_bond.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_bond.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_bond.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_bundle.c -fPIC -DPIC -o .libs/gmx_bundle.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_cluster.lo ../../../src/tools/gmx_cluster.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_chi.c -fPIC -DPIC -o .libs/gmx_chi.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_confrms.lo ../../../src/tools/gmx_confrms.c ../../../src/tools/gmx_bundle.c: In function 'dump_axes': ../../../src/tools/gmx_bundle.c:141:17: warning: unused variable 'end' [-Wunused-variable] int i,end; ^ ../../../src/tools/gmx_bundle.c: In function 'gmx_bundle': ../../../src/tools/gmx_bundle.c:210:16: warning: unused variable 'j' [-Wunused-variable] int i,j,gnx[MAX_ENDS]; ^ ../../../src/tools/gmx_bundle.c:208:14: warning: unused variable 'natoms' [-Wunused-variable] int natoms; ^ ../../../src/tools/gmx_bundle.c:198:15: warning: unused variable 'out' [-Wunused-variable] FILE *out,*flen,*fdist,*fz,*ftilt,*ftiltr,*ftiltl; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_bundle.c:42: ../../../src/tools/gmx_bundle.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_bundle.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_bundle.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_bundle.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_covar.lo ../../../src/tools/gmx_covar.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_cluster.c -fPIC -DPIC -o .libs/gmx_cluster.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_confrms.c -fPIC -DPIC -o .libs/gmx_confrms.o ../../../src/tools/gmx_chi.c: In function 'histogramming': ../../../src/tools/gmx_chi.c:418:23: warning: unused variable 'his_aa1' [-Wunused-variable] int ***his_aa,**his_aa1,*histmp; ^ ../../../src/tools/gmx_chi.c: In function 'print_transitions': ../../../src/tools/gmx_chi.c:834:8: warning: variable 'nh' set but not used [-Wunused-but-set-variable] int nh[edMax]; ^ ../../../src/tools/gmx_chi.c: In function 'gmx_chi': ../../../src/tools/gmx_chi.c:1098:16: warning: unused variable 'j' [-Wunused-variable] int i,j,**chi_lookup,*xity; ^ In file included from ../../../src/tools/gmx_chi.c:43:0: ../../../src/tools/gmx_chi.c: At top level: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/tools/gmx_chi.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_chi.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_chi.c:49:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_chi.c:59:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_covar.c -fPIC -DPIC -o .libs/gmx_covar.o ../../../src/tools/gmx_cluster.c: In function 'mark_clusters': ../../../src/tools/gmx_cluster.c:638:11: warning: unused variable 'v' [-Wunused-variable] int i,j,v; ^ In file included from ../../../src/tools/gmx_cluster.c:45:0: ../../../src/tools/gmx_cluster.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_cluster.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_cluster.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_cluster.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_confrms.c: In function 'find_matching_names': ../../../src/tools/gmx_confrms.c:252:35: warning: unused variable 'atnm2' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:27: warning: unused variable 'atnm1' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:18: warning: unused variable 'resnm2' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:9: warning: unused variable 'resnm1' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:249:7: warning: unused variable 'r' [-Wunused-variable] int r,rnr1, rnr2, prnr1, prnr2; ^ ../../../src/tools/gmx_confrms.c:247:7: warning: unused variable 'i' [-Wunused-variable] int i, i1, i2, ii1, ii2, m1, m2; ^ ../../../src/tools/gmx_confrms.c: In function 'gmx_confrms': ../../../src/tools/gmx_confrms.c:407:17: warning: unused variable 'tmas2' [-Wunused-variable] real tmas1,tmas2; ^ ../../../src/tools/gmx_confrms.c:407:11: warning: unused variable 'tmas1' [-Wunused-variable] real tmas1,tmas2; ^ ../../../src/tools/gmx_confrms.c:404:13: warning: unused variable 'j' [-Wunused-variable] int i,j,m; ^ In file included from ../../../src/tools/gmx_confrms.c:46:0: ../../../src/tools/gmx_confrms.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_confrms.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_confrms.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_confrms.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_confrms.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_current.lo ../../../src/tools/gmx_current.c ../../../src/tools/gmx_covar.c: In function 'gmx_covar': ../../../src/tools/gmx_covar.c:120:30: warning: unused variable 'count' [-Wunused-variable] int natoms,nat,ndim,count,nframes0,nframes,nlevels; ^ ../../../src/tools/gmx_covar.c:119:24: warning: unused variable 'step' [-Wunused-variable] int ntopatoms,step; ^ ../../../src/tools/gmx_covar.c:119:14: warning: unused variable 'ntopatoms' [-Wunused-variable] int ntopatoms,step; ^ ../../../src/tools/gmx_covar.c:109:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_covar.c:43: ../../../src/tools/gmx_covar.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_covar.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_covar.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_covar.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_current.c -fPIC -DPIC -o .libs/gmx_current.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_density.lo ../../../src/tools/gmx_density.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_densmap.lo ../../../src/tools/gmx_densmap.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_density.c -fPIC -DPIC -o .libs/gmx_density.o ../../../src/tools/gmx_current.c: In function 'calc_mjdsp': ../../../src/tools/gmx_current.c:266:7: warning: unused variable 'rfr' [-Wunused-variable] real rfr; ^ ../../../src/tools/gmx_current.c:265:8: warning: unused variable 'rtmp' [-Wunused-variable] real rtmp; ^ ../../../src/tools/gmx_current.c: In function 'dielectric': ../../../src/tools/gmx_current.c:338:8: warning: variable 'rest' set but not used [-Wunused-but-set-variable] real rest=0.0; ^ ../../../src/tools/gmx_current.c:326:8: warning: unused variable 'qtmp' [-Wunused-variable] real qtmp; ^ ../../../src/tools/gmx_current.c:308:13: warning: unused variable 'dm_d' [-Wunused-variable] real dm_s,dm_d; ^ ../../../src/tools/gmx_current.c:308:8: warning: unused variable 'dm_s' [-Wunused-variable] real dm_s,dm_d; ^ ../../../src/tools/gmx_current.c:298:8: warning: unused variable 'rfr' [-Wunused-variable] real rfr=0.0; ^ ../../../src/tools/gmx_current.c:293:33: warning: variable 'itrust' set but not used [-Wunused-but-set-variable] int valloc,nalloc,nfr,nvfr,m,itrust=0; ^ ../../../src/tools/gmx_current.c:293:31: warning: unused variable 'm' [-Wunused-variable] int valloc,nalloc,nfr,nvfr,m,itrust=0; ^ ../../../src/tools/gmx_current.c:292:17: warning: unused variable 'f' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c:292:15: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c:292:13: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c: In function 'gmx_current': ../../../src/tools/gmx_current.c:720:15: warning: unused variable 'tfile' [-Wunused-variable] FILE *tfile=NULL; ^ ../../../src/tools/gmx_current.c:719:15: warning: unused variable 'outi' [-Wunused-variable] FILE *outi=NULL; ^ ../../../src/tools/gmx_current.c:716:14: warning: unused variable 'lambda' [-Wunused-variable] real lambda; ^ ../../../src/tools/gmx_current.c:715:13: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_current.c:714:14: warning: unused variable 'step' [-Wunused-variable] int step; ^ ../../../src/tools/gmx_current.c:713:21: warning: unused variable 'l' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:713:17: warning: unused variable 'k' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:713:15: warning: unused variable 'j' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:711:12: warning: unused variable 'natoms' [-Wunused-variable] int natoms; ^ ../../../src/tools/gmx_current.c:707:10: warning: variable 'bNEU' set but not used [-Wunused-but-set-variable] bool bNEU; ^ ../../../src/tools/gmx_current.c:706:13: warning: variable 'bTop' set but not used [-Wunused-but-set-variable] bool bTop; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_current.c:40: ../../../src/tools/gmx_current.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_current.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_current.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_current.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_density.c: In function 'calc_density': ../../../src/tools/gmx_density.c:261:9: warning: unused variable 'buf' [-Wunused-variable] char *buf; /* for tmp. keeping atomname */ ^ ../../../src/tools/gmx_density.c:254:9: warning: unused variable 'j' [-Wunused-variable] i,j,n, /* loop indices */ ^ ../../../src/tools/gmx_density.c:253:9: warning: unused variable 'slCount' [-Wunused-variable] **slCount, /* nr. of atoms in one slice for a group */ ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_density.c:48: ../../../src/tools/gmx_density.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_density.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_density.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_density.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_densmap.c -fPIC -DPIC -o .libs/gmx_densmap.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dih.lo ../../../src/tools/gmx_dih.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dielectric.lo ../../../src/tools/gmx_dielectric.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_densmap.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_densmap.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_densmap.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_densmap.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dih.c -fPIC -DPIC -o .libs/gmx_dih.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dielectric.c -fPIC -DPIC -o .libs/gmx_dielectric.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_kinetics.lo ../../../src/tools/gmx_kinetics.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_spatial.lo ../../../src/tools/gmx_spatial.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dipoles.lo ../../../src/tools/gmx_dipoles.c In file included from ../../../src/tools/gmx_dih.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dih.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dih.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dih.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_dih.c:55:13: warning: 'dump_dih' defined but not used [-Wunused-function] static void dump_dih(int nframes,char *title,real time[],real dih[]) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_kinetics.c -fPIC -DPIC -o .libs/gmx_kinetics.o ../../../src/tools/gmx_dielectric.c: In function 'calc_nbegin': ../../../src/tools/gmx_dielectric.c:60:11: warning: unused variable 'dtt' [-Wunused-variable] real dt,dtt; ^ ../../../src/tools/gmx_dielectric.c:60:8: warning: unused variable 'dt' [-Wunused-variable] real dt,dtt; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_disre.lo ../../../src/tools/gmx_disre.c In file included from ../../../src/tools/gmx_dielectric.c:44:0: ../../../src/tools/gmx_dielectric.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_dielectric.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_dielectric.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dielectric.c:53:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dist.lo ../../../src/tools/gmx_dist.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_spatial.c -fPIC -DPIC -o .libs/gmx_spatial.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dipoles.c -fPIC -DPIC -o .libs/gmx_dipoles.o ../../../src/tools/gmx_spatial.c: In function 'gmx_spatial': ../../../src/tools/gmx_spatial.c:131:21: warning: unused variable 'shx' [-Wunused-variable] rvec *xtop,*shx[26]; ^ ../../../src/tools/gmx_spatial.c:103:15: warning: unused variable 'bSHIFT' [-Wunused-variable] static bool bSHIFT=FALSE; ^ ../../../src/tools/gmx_spatial.c: At top level: ../../../src/tools/gmx_spatial.c:38:14: warning: 'SRCID_template_c' defined but not used [-Wunused-variable] static char *SRCID_template_c = "$Id$"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_spatial.c:40: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_spatial.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_spatial.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_spatial.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_kinetics.c: In function 'epnm': ../../../src/tools/gmx_kinetics.c:96:16: warning: unused variable 'ii' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:96:13: warning: unused variable 'ni' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:96:10: warning: unused variable 'nn' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:95:31: warning: unused variable 'to' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c:95:23: warning: unused variable 'from' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c:95:15: warning: unused variable 'buf' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c: In function 'dump_remd_parameters': ../../../src/tools/gmx_kinetics.c:559:8: warning: unused variable 'rhs' [-Wunused-variable] real rhs,tauf,taub,fff,DG; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_kinetics.c:42: ../../../src/tools/gmx_kinetics.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_kinetics.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_kinetics.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_kinetics.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_kinetics.c:85:14: warning: 'itoa' defined but not used [-Wunused-function] static char *itoa(int i) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dist.c -fPIC -DPIC -o .libs/gmx_dist.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_disre.c -fPIC -DPIC -o .libs/gmx_disre.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dyndom.lo ../../../src/tools/gmx_dyndom.c ../../../src/tools/gmx_dipoles.c: In function 'do_gkr': ../../../src/tools/gmx_dipoles.c:156:17: warning: unused variable 'r2' [-Wunused-variable] real qtot,q,r2,cosa,rr,phi; ^ ../../../src/tools/gmx_dipoles.c:155:30: warning: unused variable 'index' [-Wunused-variable] int gi,gj,j0,j1,i,j,k,n,index,grp0,grp1; ^ ../../../src/tools/gmx_dipoles.c: In function 'print_gkrbin': ../../../src/tools/gmx_dipoles.c:291:14: warning: unused variable 'n' [-Wunused-variable] int i,j,n,last; ^ ../../../src/tools/gmx_dipoles.c:291:12: warning: unused variable 'j' [-Wunused-variable] int i,j,n,last; ^ ../../../src/tools/gmx_dipoles.c: In function 'mol_quad': ../../../src/tools/gmx_dipoles.c:418:17: warning: unused variable 'rcom_n' [-Wunused-variable] real rcom_m,rcom_n; ^ ../../../src/tools/gmx_dipoles.c:418:10: warning: unused variable 'rcom_m' [-Wunused-variable] real rcom_m,rcom_n; ^ ../../../src/tools/gmx_dipoles.c: In function 'compute_avercos': ../../../src/tools/gmx_dipoles.c:580:19: warning: unused variable 'n5' [-Wunused-variable] double dc,dc1,d,n5,ddc1,ddc2,ddc3; ^ ../../../src/tools/gmx_dipoles.c:580:13: warning: unused variable 'dc1' [-Wunused-variable] double dc,dc1,d,n5,ddc1,ddc2,ddc3; ^ ../../../src/tools/gmx_dipoles.c: In function 'do_dip': ../../../src/tools/gmx_dipoles.c:872:8: warning: unused variable 'gi' [-Wunused-variable] int gi,ind0,ind1; ^ ../../../src/tools/gmx_dipoles.c:675:27: warning: unused variable 'Vol' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:23: warning: unused variable 'Msq' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:20: warning: unused variable 'Mz' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:17: warning: unused variable 'My' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:14: warning: unused variable 'Mx' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:668:32: warning: unused variable 'lambda' [-Wunused-variable] real rcut=0,t,t0,t1,dt,lambda,dd,rms_cos; ^ ../../../src/tools/gmx_dipoles.c:667:25: warning: unused variable 'buf' [-Wunused-variable] char **enm=NULL,buf[STRLEN]; ^ ../../../src/tools/gmx_dipoles.c:665:44: warning: unused variable 'step' [-Wunused-variable] int *dipole_bin,ndipbin,ibin,iVol,step,idim=-1; ^ ../../../src/tools/gmx_dipoles.c:664:32: warning: unused variable 'nmol' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c:664:18: warning: unused variable 'k' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c:664:16: warning: unused variable 'j' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c: In function 'gmx_dipoles': ../../../src/tools/gmx_dipoles.c:1271:16: warning: unused variable 'bCorr' [-Wunused-variable] bool bCorr,bQuad,bGkr,bMU,bSlab; ^ ../../../src/tools/gmx_dipoles.c:1227:31: warning: unused variable 'bMolCorr' [-Wunused-variable] static bool bAverCorr=FALSE,bMolCorr=FALSE,bPairs=TRUE,bPhi=FALSE; ^ ../../../src/tools/gmx_dipoles.c:1227:15: warning: variable 'bAverCorr' set but not used [-Wunused-but-set-variable] static bool bAverCorr=FALSE,bMolCorr=FALSE,bPairs=TRUE,bPhi=FALSE; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dipoles.c:43: ../../../src/tools/gmx_dipoles.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dipoles.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dipoles.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_dipoles.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_dist.c: In function 'gmx_dist': ../../../src/tools/gmx_dist.c:101:21: warning: unused variable 'fplt' [-Wunused-variable] FILE *fp=NULL,*fplt=NULL; ^ ../../../src/tools/gmx_dist.c:93:11: warning: unused variable 'aid' [-Wunused-variable] atom_id aid; ^ ../../../src/tools/gmx_dist.c:87:17: warning: unused variable 'v' [-Wunused-variable] rvec *x=NULL,*v=NULL,dx; ^ In file included from ../../../src/tools/gmx_dist.c:45:0: ../../../src/tools/gmx_dist.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dist.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dist.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dist.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_enemat.lo ../../../src/tools/gmx_enemat.c ../../../src/tools/gmx_disre.c: In function 'check_viol': ../../../src/tools/gmx_disre.c:144:11: warning: variable 'ener' set but not used [-Wunused-but-set-variable] real ener,rt,mviol,tviol,viol,lam,dvdl,drt; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_energy.lo ../../../src/tools/gmx_energy.c ../../../src/tools/gmx_disre.c: In function 'dump_disre_matrix': ../../../src/tools/gmx_disre.c:449:12: warning: unused variable 'iii' [-Wunused-variable] int iii,i,j,nra,nratoms,tp,ri,rj,index,nlabel,label; ^ In file included from ../../../src/tools/gmx_disre.c:44:0: ../../../src/tools/gmx_disre.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_disre.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_disre.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_disre.c:53: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_disre.c:54:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/tools/gmx_disre.c:57:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dyndom.c -fPIC -DPIC -o .libs/gmx_dyndom.o ../../../src/tools/gmx_dyndom.c: In function 'rot_conf': ../../../src/tools/gmx_dyndom.c:60:14: warning: unused variable 'j' [-Wunused-variable] int i,j,ai; ^ ../../../src/tools/gmx_dyndom.c:58:43: warning: unused variable 'temp43' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:58:36: warning: unused variable 'temp21' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:58:30: warning: unused variable 'temp4' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:57:49: warning: unused variable 'Tx' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:57:42: warning: unused variable 'Tinvcm' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:57:38: warning: unused variable 'Tcm' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:55:18: warning: unused variable 'center' [-Wunused-variable] rvec arrow,center,xcm; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dyndom.c:41: ../../../src/tools/gmx_dyndom.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_dyndom.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dyndom.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dyndom.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_enemat.c -fPIC -DPIC -o .libs/gmx_enemat.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_energy.c -fPIC -DPIC -o .libs/gmx_energy.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_lie.lo ../../../src/tools/gmx_lie.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_filter.lo ../../../src/tools/gmx_filter.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_gyrate.lo ../../../src/tools/gmx_gyrate.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_lie.c -fPIC -DPIC -o .libs/gmx_lie.o ../../../src/tools/gmx_energy.c: In function 'select_by_name': ../../../src/tools/gmx_energy.c:139:8: warning: unused variable 'n' [-Wunused-variable] int n,k,kk,j,i,nmatch,nind,nss; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_h2order.lo ../../../src/tools/gmx_h2order.c ../../../src/tools/gmx_energy.c: In function 'analyse_ener': ../../../src/tools/gmx_energy.c:529:16: warning: unused variable 'kkk' [-Wunused-variable] int i,j,m,k,kkk; ^ ../../../src/tools/gmx_energy.c:524:30: warning: unused variable 'diffav' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:22: warning: unused variable 'diffsum' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:14: warning: unused variable 'oldfrac' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:8: warning: unused variable 'sfrac' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c: In function 'fec': ../../../src/tools/gmx_energy.c:770:8: warning: unused variable 't' [-Wunused-variable] real t, aver, beta; ^ ../../../src/tools/gmx_energy.c:766:22: warning: unused variable 'step' [-Wunused-variable] int nre,timecheck,step,nenergy2,maxenergy; ^ ../../../src/tools/gmx_energy.c:766:8: warning: unused variable 'nre' [-Wunused-variable] int nre,timecheck,step,nenergy2,maxenergy; ^ ../../../src/tools/gmx_energy.c: In function 'gmx_energy': ../../../src/tools/gmx_energy.c:979:16: warning: unused variable 'nms' [-Wunused-variable] char **nms; ^ ../../../src/tools/gmx_energy.c:977:27: warning: unused variable 'enm2' [-Wunused-variable] char **enm=NULL,**enm2=NULL,**leg=NULL,**pairleg,**odtleg,**otenleg; ^ ../../../src/tools/gmx_energy.c:973:42: warning: unused variable 'bEDR' [-Wunused-variable] bool bFoundFirst,bFoundOld,bCont,bEDR,bVisco; ^ ../../../src/tools/gmx_energy.c:959:23: warning: unused variable 'ee' [-Wunused-variable] t_energy *oldee,**ee; ^ ../../../src/tools/gmx_energy.c:953:16: warning: unused variable 'drout' [-Wunused-variable] FILE **drout; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_energy.c:46: ../../../src/tools/gmx_energy.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_energy.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_energy.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_energy.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_energy.c:118:12: warning: 'strcount' defined but not used [-Wunused-function] static int strcount(char *s1,char *s2) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_gyrate.c -fPIC -DPIC -o .libs/gmx_gyrate.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_enemat.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_enemat.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_enemat.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_enemat.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_filter.c -fPIC -DPIC -o .libs/gmx_filter.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_lie.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_lie.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_lie.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_lie.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_gyrate.c: In function 'gmx_gyrate': ../../../src/tools/gmx_gyrate.c:190:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_gyrate.c:43: ../../../src/tools/gmx_gyrate.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_gyrate.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_gyrate.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_gyrate.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_filter.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_filter.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_filter.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_filter.c:53:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_h2order.c -fPIC -DPIC -o .libs/gmx_h2order.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_hbond.lo ../../../src/tools/gmx_hbond.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_h2order.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_h2order.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_h2order.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_h2order.c:54: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_helix.lo ../../../src/tools/gmx_helix.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_mindist.lo ../../../src/tools/gmx_mindist.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_msd.lo ../../../src/tools/gmx_msd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_hbond.c -fPIC -DPIC -o .libs/gmx_hbond.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_morph.lo ../../../src/tools/gmx_morph.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_mindist.c -fPIC -DPIC -o .libs/gmx_mindist.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_helix.c -fPIC -DPIC -o .libs/gmx_helix.o ../../../src/tools/gmx_mindist.c: In function 'periodic_mindist_plot': ../../../src/tools/gmx_mindist.c:114:10: warning: unused variable 'r' [-Wunused-variable] real r,rmin,rmax,rmint,tmint; ^ ../../../src/tools/gmx_mindist.c: In function 'dist_plot': ../../../src/tools/gmx_mindist.c:245:16: warning: unused variable 'frout' [-Wunused-variable] t_trxframe frout; ^ ../../../src/tools/gmx_mindist.c: In function 'gmx_mindist': ../../../src/tools/gmx_mindist.c:473:15: warning: unused variable 'j' [-Wunused-variable] int i,j,nres=0; ^ ../../../src/tools/gmx_mindist.c:472:14: warning: unused variable 'atm' [-Wunused-variable] FILE *atm; ^ ../../../src/tools/gmx_mindist.c:467:14: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_mindist.c:441:16: warning: unused variable 'bugs' [-Wunused-variable] static char *bugs[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_mindist.c:48: ../../../src/tools/gmx_mindist.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_mindist.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_mindist.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_mindist.c:53: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_msd.c -fPIC -DPIC -o .libs/gmx_msd.o ../../../src/tools/gmx_hbond.c: In function 'mk_hbmap': ../../../src/tools/gmx_hbond.c:182:10: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/tools/gmx_hbond.c: In function 'add_frames': ../../../src/tools/gmx_hbond.c:194:14: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:12: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:10: warning: unused variable 'j' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:8: warning: unused variable 'i' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c: In function 'search_donors': ../../../src/tools/gmx_hbond.c:543:14: warning: unused variable 'stop' [-Wunused-variable] bool stop; ^ ../../../src/tools/gmx_hbond.c:539:22: warning: unused variable 'n' [-Wunused-variable] int i,j,nra,n; ^ ../../../src/tools/gmx_hbond.c:539:18: warning: unused variable 'nra' [-Wunused-variable] int i,j,nra,n; ^ ../../../src/tools/gmx_hbond.c: In function 'is_hbond': ../../../src/tools/gmx_hbond.c:900:19: warning: unused variable 'ihb' [-Wunused-variable] int h,hh,id,ja,ihb; ^ ../../../src/tools/gmx_hbond.c: In function 'merge_hb': ../../../src/tools/gmx_hbond.c:1021:44: warning: unused variable 'ogrp' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c:1021:40: warning: unused variable 'grp' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c:1021:32: warning: unused variable 'm' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c: In function 'do_nhb_dist': ../../../src/tools/gmx_hbond.c:1077:8: warning: unused variable 'nhb' [-Wunused-variable] h_id nhb; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmeig.lo ../../../src/tools/gmx_nmeig.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_morph.c -fPIC -DPIC -o .libs/gmx_morph.o ../../../src/tools/gmx_helix.c: In function 'gmx_helix': ../../../src/tools/gmx_helix.c:213:21: warning: unused variable 'nre' [-Wunused-variable] int natoms,nre,nres,step; ^ In file included from ../../../src/tools/gmx_helix.c:43:0: ../../../src/tools/gmx_helix.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_helix.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_helix.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_helix.c:62:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_hbond.c: In function 'smooth_tail': ../../../src/tools/gmx_hbond.c:1439:9: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/tools/gmx_hbond.c: In function 'analyse_corr': ../../../src/tools/gmx_hbond.c:1461:56: warning: unused variable 'dt' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:28: warning: unused variable 'dgp' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:25: warning: unused variable 'dg' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:14: warning: variable 'chi22' set but not used [-Wunused-but-set-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c: In function 'do_hbac': ../../../src/tools/gmx_hbond.c:1585:27: warning: variable 'ngh' set but not used [-Wunused-but-set-variable] int nh,nhbonds,nhydro,ngh; ^ ../../../src/tools/gmx_hbond.c:1577:18: warning: unused variable 'nd' [-Wunused-variable] int i,j,k,m,n,nd,ihb,idist,n2,nn; ^ ../../../src/tools/gmx_hbond.c:1577:16: warning: unused variable 'n' [-Wunused-variable] int i,j,k,m,n,nd,ihb,idist,n2,nn; ^ ../../../src/tools/gmx_hbond.c: In function 'gmx_hbond': ../../../src/tools/gmx_hbond.c:2051:30: warning: unused variable 'bin' [-Wunused-variable] int grp,nabin,nrbin,bin,resdist,ihb; ^ ../../../src/tools/gmx_hbond.c:2049:43: warning: unused variable 'was' [-Wunused-variable] bool bSelected,bHBmap,bStop,bTwo,new,was,bBox,bTric; ^ ../../../src/tools/gmx_hbond.c:2049:39: warning: unused variable 'new' [-Wunused-variable] bool bSelected,bHBmap,bStop,bTwo,new,was,bBox,bTric; ^ ../../../src/tools/gmx_hbond.c:2045:34: warning: unused variable 'ja' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:31: warning: unused variable 'id' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:27: warning: unused variable 'end' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:21: warning: unused variable 'start' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:19: warning: unused variable 'l' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_hbond.c:42: ../../../src/tools/gmx_hbond.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_hbond.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_hbond.c:53: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_hbond.c:53:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.h:40, from ../../../src/tools/gmx_hbond.c:59: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/tools/gmx_hbond.c:372:13: warning: 'in_list' defined but not used [-Wunused-function] static bool in_list(atom_id selection,int isize,atom_id *index) ^ ../../../src/tools/gmx_msd.c: In function 'printmol': ../../../src/tools/gmx_msd.c:455:13: warning: unused variable 'r' [-Wunused-variable] real a,b,r,D,Dav,D2av,VarD,sqrtD,sqrtD_max,scale; ^ ../../../src/tools/gmx_msd.c:452:14: warning: unused variable 'out_pdb' [-Wunused-variable] FILE *out,out_pdb; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_msd.c:47: ../../../src/tools/gmx_msd.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_msd.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_msd.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_msd.c:144:13: warning: 'done_corr' defined but not used [-Wunused-function] static void done_corr(t_corr *this) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_morph.c:40: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_morph.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmeig.c -fPIC -DPIC -o .libs/gmx_nmeig.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmens.lo ../../../src/tools/gmx_nmens.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_order.lo ../../../src/tools/gmx_order.c ../../../src/tools/gmx_nmeig.c: In function 'nma_full_hessian': ../../../src/tools/gmx_nmeig.c:76:19: warning: unused variable 'rdum' [-Wunused-variable] real mass_fac,rdum; ^ ../../../src/tools/gmx_nmeig.c: In function 'gmx_nmeig': ../../../src/tools/gmx_nmeig.c:229:15: warning: unused variable 'index' [-Wunused-variable] atom_id *index; ^ ../../../src/tools/gmx_nmeig.c:227:24: warning: unused variable 'gnx' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:227:22: warning: unused variable 'd' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:227:20: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:226:15: warning: unused variable 'grpname' [-Wunused-variable] char *grpname,title[256]; ^ ../../../src/tools/gmx_nmeig.c:225:36: warning: unused variable 'count' [-Wunused-variable] int natoms,ndim,nrow,ncol,count; ^ ../../../src/tools/gmx_nmeig.c:224:19: warning: unused variable 'mass_fac' [-Wunused-variable] real rdum,mass_fac; ^ ../../../src/tools/gmx_nmeig.c:224:14: warning: unused variable 'rdum' [-Wunused-variable] real rdum,mass_fac; ^ ../../../src/tools/gmx_nmeig.c:217:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_nmeig.c:217:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmeig.c:43: ../../../src/tools/gmx_nmeig.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmeig.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmeig.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmeig.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmens.c -fPIC -DPIC -o .libs/gmx_nmens.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_order.c -fPIC -DPIC -o .libs/gmx_order.o ../../../src/tools/gmx_nmens.c: In function 'gmx_nmens': ../../../src/tools/gmx_nmens.c:105:14: warning: unused variable 'eigvalnr' [-Wunused-variable] int * eigvalnr; ^ ../../../src/tools/gmx_nmens.c:104:19: warning: unused variable 'invfr' [-Wunused-variable] real rfac,invfr,rhalf,jr; ^ ../../../src/tools/gmx_nmens.c:99:21: warning: unused variable 'neigval' [-Wunused-variable] int natoms,neigval; ^ ../../../src/tools/gmx_nmens.c:98:22: warning: unused variable 'totmass' [-Wunused-variable] real *eigval,totmass,*invsqrtm,t,disp; ^ ../../../src/tools/gmx_nmens.c:89:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_nmens.c:89:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmens.c:43: ../../../src/tools/gmx_nmens.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmens.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmens.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmens.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_nmens.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_principal.lo ../../../src/tools/gmx_principal.c ../../../src/tools/gmx_order.c: In function 'find_nearest_neighbours': ../../../src/tools/gmx_order.c:86:12: warning: unused variable 'nnb' [-Wunused-variable] int **nnb; ^ ../../../src/tools/gmx_order.c:85:14: warning: unused variable 'mm' [-Wunused-variable] int m1,mm; ^ ../../../src/tools/gmx_order.c:85:11: warning: unused variable 'm1' [-Wunused-variable] int m1,mm; ^ ../../../src/tools/gmx_order.c:84:12: warning: unused variable 'd' [-Wunused-variable] t_dist *d; ^ ../../../src/tools/gmx_order.c:83:12: warning: unused variable 'dmat' [-Wunused-variable] t_mat *dmat; ^ ../../../src/tools/gmx_order.c:80:18: warning: unused variable 'dx2' [-Wunused-variable] rvec dx,dx1,dx2,rj,rk,urk,urj; ^ ../../../src/tools/gmx_order.c:80:14: warning: unused variable 'dx1' [-Wunused-variable] rvec dx,dx1,dx2,rj,rk,urk,urj; ^ ../../../src/tools/gmx_order.c:79:14: warning: unused variable 'i2' [-Wunused-variable] int i1,i2,i,ibin,j,k,l,n,*nn[4]; ^ ../../../src/tools/gmx_order.c:79:11: warning: unused variable 'i1' [-Wunused-variable] int i1,i2,i,ibin,j,k,l,n,*nn[4]; ^ ../../../src/tools/gmx_order.c:77:11: warning: unused variable 'fnsgdist' [-Wunused-variable] char fnsgdist[32]; ^ ../../../src/tools/gmx_order.c:76:12: warning: unused variable 'fpoutdist' [-Wunused-variable] FILE *fpoutdist; ^ ../../../src/tools/gmx_order.c: In function 'calc_tetra_order_parm': ../../../src/tools/gmx_order.c:228:14: warning: unused variable 'i' [-Wunused-variable] int i,*isize,ng,nframes; ^ ../../../src/tools/gmx_order.c:219:39: warning: unused variable 'subtitle' [-Wunused-variable] char title[STRLEN],fn[STRLEN],subtitle[STRLEN]; ^ ../../../src/tools/gmx_order.c:219:28: warning: unused variable 'fn' [-Wunused-variable] char title[STRLEN],fn[STRLEN],subtitle[STRLEN]; ^ ../../../src/tools/gmx_order.c: In function 'calc_order': ../../../src/tools/gmx_order.c:315:9: warning: unused variable 'dbangle' [-Wunused-variable] real dbangle = 0, /* angle between double bond and axis */ ^ ../../../src/tools/gmx_order.c:311:13: warning: unused variable 'l' [-Wunused-variable] i,j,m,k,l,teller = 0, ^ ../../../src/tools/gmx_order.c: In function 'gmx_order': ../../../src/tools/gmx_order.c:556:13: warning: unused variable 'i' [-Wunused-variable] i, ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_order.c:48: ../../../src/tools/gmx_order.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_order.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_order.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_order.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../src/tools/gmx_msd.c: In function 'corr_loop': ../../../include/vec.h:325:4: warning: '*((void *)&com+8)' may be used uninitialized in this function [-Wmaybe-uninitialized] z=a[ZZ]-b[ZZ]; ^ ../../../src/tools/gmx_msd.c:525:29: note: '*((void *)&com+8)' was declared here rvec *x[2],*xa[2],com; ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:324:4: warning: '*((void *)&com+4)' may be used uninitialized in this function [-Wmaybe-uninitialized] y=a[YY]-b[YY]; ^ ../../../src/tools/gmx_msd.c:525:29: note: '*((void *)&com+4)' was declared here rvec *x[2],*xa[2],com; ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:323:4: warning: 'com' may be used uninitialized in this function [-Wmaybe-uninitialized] x=a[XX]-b[XX]; ^ ../../../src/tools/gmx_msd.c:525:29: note: 'com' was declared here rvec *x[2],*xa[2],com; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_polystat.lo ../../../src/tools/gmx_polystat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_principal.c -fPIC -DPIC -o .libs/gmx_principal.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_polystat.c -fPIC -DPIC -o .libs/gmx_polystat.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_potential.lo ../../../src/tools/gmx_potential.c ../../../src/tools/gmx_principal.c: In function 'gmx_principal': ../../../src/tools/gmx_principal.c:97:20: warning: unused variable 'a3' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:97:17: warning: unused variable 'a2' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:97:14: warning: unused variable 'a1' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:95:28: warning: unused variable 'mol' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:24: warning: unused variable 'nam' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:18: warning: unused variable 'm' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:16: warning: unused variable 'j' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_principal.c:43: ../../../src/tools/gmx_principal.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_principal.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_principal.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_principal.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rama.lo ../../../src/tools/gmx_rama.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_polystat.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_polystat.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_polystat.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_polystat.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_potential.c -fPIC -DPIC -o .libs/gmx_potential.o ../../../src/tools/gmx_potential.c: In function 'calc_potential': ../../../src/tools/gmx_potential.c:108:9: warning: unused variable 'j' [-Wunused-variable] i,j,n, /* loop indices */ ^ ../../../src/tools/gmx_potential.c:107:9: warning: unused variable 'slCount' [-Wunused-variable] **slCount, /* nr. of atoms in one slice for a group */ ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_potential.c:50: ../../../src/tools/gmx_potential.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_potential.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_potential.c:53:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_potential.c:55: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rama.c -fPIC -DPIC -o .libs/gmx_rama.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rama.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rama.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rama.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rama.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rdf.lo ../../../src/tools/gmx_rdf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rms.lo ../../../src/tools/gmx_rms.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rmsdist.lo ../../../src/tools/gmx_rmsdist.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rmsf.lo ../../../src/tools/gmx_rmsf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rdf.c -fPIC -DPIC -o .libs/gmx_rdf.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rotacf.lo ../../../src/tools/gmx_rotacf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rmsdist.c -fPIC -DPIC -o .libs/gmx_rmsdist.o ../../../src/tools/gmx_rdf.c: In function 'do_rdf': ../../../src/tools/gmx_rdf.c:168:23: warning: unused variable 'index_cm' [-Wunused-variable] atom_id **index,*index_cm=NULL; ^ ../../../src/tools/gmx_rdf.c:167:21: warning: unused variable 'isize_cm' [-Wunused-variable] int *isize,isize_cm=0,nrdf=0,max_i,isize0,isize_g; ^ ../../../src/tools/gmx_rdf.c:164:40: warning: unused variable 'n' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:164:37: warning: unused variable 'j1' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:164:34: warning: unused variable 'j0' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:162:28: warning: unused variable 'outf2' [-Wunused-variable] char outf1[STRLEN],outf2[STRLEN]; ^ ../../../src/tools/gmx_rdf.c:162:14: warning: unused variable 'outf1' [-Wunused-variable] char outf1[STRLEN],outf2[STRLEN]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rdf.c:47: ../../../src/tools/gmx_rdf.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rdf.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rdf.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rdf.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/fftgrid.h:46:0, from ../../../src/tools/gmx_rdf.c:57: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rms.c -fPIC -DPIC -o .libs/gmx_rms.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_saltbr.lo ../../../src/tools/gmx_saltbr.c ../../../src/tools/gmx_rmsdist.c: In function 'analyze_noe_equivalent': ../../../src/tools/gmx_rmsdist.c:249:11: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/tools/gmx_rmsdist.c: In function 'gmx_rmsdist': ../../../src/tools/gmx_rmsdist.c:534:36: warning: unused variable 'gj' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ ../../../src/tools/gmx_rmsdist.c:534:33: warning: unused variable 'gi' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ ../../../src/tools/gmx_rmsdist.c:534:24: warning: unused variable 'j' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ In file included from ../../../src/tools/gmx_rmsdist.c:47:0: ../../../src/tools/gmx_rmsdist.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rmsdist.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rmsdist.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rmsdist.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rmsf.c -fPIC -DPIC -o .libs/gmx_rmsf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rotacf.c -fPIC -DPIC -o .libs/gmx_rotacf.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sas.lo ../../../src/tools/gmx_sas.c ../../../src/tools/gmx_rmsf.c: In function 'gmx_rmsf': ../../../src/tools/gmx_rmsf.c:211:16: warning: unused variable 'buf' [-Wunused-variable] char buf[256],*label; ^ ../../../src/tools/gmx_rmsf.c:210:33: warning: unused variable 'res0' [-Wunused-variable] int status,npdbatoms,res0; ^ ../../../src/tools/gmx_rmsf.c:206:16: warning: unused variable 'bCont' [-Wunused-variable] bool bCont; ^ ../../../src/tools/gmx_rmsf.c:202:16: warning: unused variable 'ir' [-Wunused-variable] t_inputrec ir; ^ ../../../src/tools/gmx_rmsf.c:201:16: warning: unused variable 'header' [-Wunused-variable] t_tpxheader header; ^ ../../../src/tools/gmx_rmsf.c:199:33: warning: unused variable 'w_rms' [-Wunused-variable] real t,lambda,*w_rls,*w_rms; ^ ../../../src/tools/gmx_rmsf.c:199:18: warning: unused variable 'lambda' [-Wunused-variable] real t,lambda,*w_rls,*w_rms; ^ ../../../src/tools/gmx_rmsf.c:198:40: warning: unused variable 'g' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:31: warning: unused variable 'natoms' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:21: warning: unused variable 'nre' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:16: warning: unused variable 'step' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:189:39: warning: unused variable 'bdevX' [-Wunused-variable] static bool bRes=FALSE,bAniso=FALSE,bdevX=FALSE,bFit=TRUE; ^ In file included from ../../../src/tools/gmx_rmsf.c:45:0: ../../../src/tools/gmx_rmsf.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rmsf.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rmsf.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rmsf.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rmsf.c:50:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_saltbr.c -fPIC -DPIC -o .libs/gmx_saltbr.o ../../../src/tools/gmx_saltbr.c: In function 'gmx_saltbr': ../../../src/tools/gmx_saltbr.c:163:14: warning: unused variable 'label' [-Wunused-variable] char label[234]; ^ ../../../src/tools/gmx_saltbr.c:162:17: warning: unused variable 'dt' [-Wunused-variable] double t0,dt; ^ ../../../src/tools/gmx_saltbr.c:162:14: warning: unused variable 't0' [-Wunused-variable] double t0,dt; ^ ../../../src/tools/gmx_saltbr.c:156:50: warning: unused variable 'n3' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ ../../../src/tools/gmx_saltbr.c:156:47: warning: unused variable 'n2' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ ../../../src/tools/gmx_saltbr.c:156:44: warning: unused variable 'n1' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_saltbr.c:43: ../../../src/tools/gmx_saltbr.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_saltbr.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_saltbr.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_saltbr.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sas.c -fPIC -DPIC -o .libs/gmx_sas.o ../../../src/tools/gmx_sas.c: In function 'sas_plot': ../../../src/tools/gmx_sas.c:369:12: warning: unused variable 'mm' [-Wunused-variable] real mm; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sas.c:47: ../../../src/tools/gmx_sas.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sas.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sas.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sas.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_sas.c:55:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sdf.lo ../../../src/tools/gmx_sdf.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rotacf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_rotacf.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rotacf.c:54: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rotacf.c:54:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sgangle.lo ../../../src/tools/gmx_sgangle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sdf.c -fPIC -DPIC -o .libs/gmx_sdf.o In file included from ../../../src/tools/gmx_rms.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sgangle.c -fPIC -DPIC -o .libs/gmx_sgangle.o ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rms.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rms.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rms.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_sdf.c: In function 'do_sdf': ../../../src/tools/gmx_sdf.c:101:25: warning: unused variable 'bRefDone' [-Wunused-variable] bool bTop=FALSE,bRefDone=FALSE,bInGroup=FALSE; ^ ../../../src/tools/gmx_sdf.c:97:17: warning: unused variable 'jx' [-Wunused-variable] atom_id ix,jx; ^ ../../../src/tools/gmx_sdf.c:97:14: warning: unused variable 'ix' [-Wunused-variable] atom_id ix,jx; ^ ../../../src/tools/gmx_sdf.c:92:17: warning: unused variable 'xcog' [-Wunused-variable] rvec *x,xcog,dx,*x_i1,xi,*x_refmol; ^ ../../../src/tools/gmx_sdf.c:89:23: warning: variable 'hbox' set but not used [-Wunused-but-set-variable] real t,boxmin,hbox,normfac; ^ ../../../src/tools/gmx_sdf.c:88:15: warning: unused variable 'index_ref' [-Wunused-variable] atom_id *index_ref=NULL; ^ ../../../src/tools/gmx_sdf.c:87:15: warning: unused variable 'index_cg' [-Wunused-variable] atom_id *index_cg=NULL; ^ ../../../src/tools/gmx_sdf.c:85:24: warning: unused variable 'refc' [-Wunused-variable] int nrefmol=0,refc=0; ^ ../../../src/tools/gmx_sdf.c:83:14: warning: unused variable 'isize_ref' [-Wunused-variable] int isize_ref=3; ^ ../../../src/tools/gmx_sdf.c:82:14: warning: unused variable 'isize_cg' [-Wunused-variable] int isize_cg=0; ^ ../../../src/tools/gmx_sdf.c:75:41: warning: unused variable 'dest' [-Wunused-variable] int ng,natoms,i,j,k,l,X,Y,Z,lc,dest; ^ ../../../src/tools/gmx_sdf.c:75:38: warning: unused variable 'lc' [-Wunused-variable] int ng,natoms,i,j,k,l,X,Y,Z,lc,dest; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sorient.lo ../../../src/tools/gmx_sorient.c ../../../src/tools/gmx_sdf.c: At top level: ../../../src/tools/gmx_sdf.c:20:14: warning: 'SRCID_template_c' defined but not used [-Wunused-variable] static char *SRCID_template_c = "$Id$"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sdf.c:28: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sdf.c:28:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sdf.c:31:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sdf.c:33: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sgangle.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sgangle.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sgangle.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sgangle.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_spol.lo ../../../src/tools/gmx_spol.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sorient.c -fPIC -DPIC -o .libs/gmx_sorient.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_spol.c -fPIC -DPIC -o .libs/gmx_spol.o ../../../src/tools/gmx_sorient.c: In function 'gmx_sorient': ../../../src/tools/gmx_sorient.c:114:72: warning: unused variable 'mtot' [-Wunused-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:114:67: warning: unused variable 'mass' [-Wunused-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:114:20: warning: variable 'two_pi' set but not used [-Wunused-but-set-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:108:13: warning: unused variable 'j' [-Wunused-variable] int i,j,p,sa0,sa1,sa2,n,ntot,nf,m,*hist1,*hist2,*histn,nbin1,nbin2,nrbin; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sorient.c:41: ../../../src/tools/gmx_sorient.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_sorient.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sorient.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sorient.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_tcaf.lo ../../../src/tools/gmx_tcaf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_traj.lo ../../../src/tools/gmx_traj.c ../../../src/tools/gmx_spol.c: In function 'gmx_spol': ../../../src/tools/gmx_spol.c:165:28: warning: unused variable 'bPBC' [-Wunused-variable] static bool bCom = FALSE,bPBC = FALSE; ^ ../../../src/tools/gmx_spol.c:131:13: warning: unused variable 'xtop' [-Wunused-variable] rvec *xtop,*x,xref,try,dx,dip,dir; ^ ../../../src/tools/gmx_spol.c:127:12: warning: unused variable 'title' [-Wunused-variable] char title[STRLEN]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_spol.c:41: ../../../src/tools/gmx_spol.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_spol.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_spol.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_spol.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_traj.c -fPIC -DPIC -o .libs/gmx_traj.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_velacc.lo ../../../src/tools/gmx_velacc.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_tcaf.c -fPIC -DPIC -o .libs/gmx_tcaf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_velacc.c -fPIC -DPIC -o .libs/gmx_velacc.o ../../../src/tools/gmx_traj.c: In function 'write_pdb_bfac': ../../../src/tools/gmx_traj.c:337:11: warning: unused variable 'bOne' [-Wunused-variable] bool bOne; ^ ../../../src/tools/gmx_traj.c: In function 'gmx_traj': ../../../src/tools/gmx_traj.c:525:18: warning: unused variable 'n' [-Wunused-variable] int i,j,n; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_traj.c:42: ../../../src/tools/gmx_traj.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_traj.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_traj.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_traj.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_tcaf.c: In function 'gmx_tcaf': ../../../src/tools/gmx_tcaf.c:274:16: warning: unused variable 'c1' [-Wunused-variable] real **c1,**tc; ^ ../../../src/tools/gmx_tcaf.c:265:14: warning: unused variable 'bTPS' [-Wunused-variable] bool bTPS,bTop; /* ,bCubic; */ ^ In file included from ../../../src/tools/gmx_tcaf.c:43:0: ../../../src/tools/gmx_tcaf.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_tcaf.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_tcaf.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_tcaf.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_velacc.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_velacc.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_velacc.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_velacc.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_helixorient.lo ../../../src/tools/gmx_helixorient.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_helixorient.c -fPIC -DPIC -o .libs/gmx_helixorient.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_clustsize.lo ../../../src/tools/gmx_clustsize.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_mdmat.lo ../../../src/tools/gmx_mdmat.c ../../../src/tools/gmx_helixorient.c: In function 'gmx_helixorient': ../../../src/tools/gmx_helixorient.c:125:14: warning: unused variable 'rotangle' [-Wunused-variable] real tmp,rotangle; ^ ../../../src/tools/gmx_helixorient.c:107:10: warning: unused variable 'axes' [-Wunused-variable] rvec axes[3]; ^ ../../../src/tools/gmx_helixorient.c:106:10: warning: unused variable 'axes_t0' [-Wunused-variable] rvec axes_t0[3]; ^ ../../../src/tools/gmx_helixorient.c:93:27: warning: unused variable 'vproj' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:22: warning: unused variable 'vtmp' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:19: warning: unused variable 'p2' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:16: warning: unused variable 'p1' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:92:10: warning: unused variable 'averageaxis' [-Wunused-variable] rvec averageaxis; ^ ../../../src/tools/gmx_helixorient.c:86:9: warning: unused variable 'd' [-Wunused-variable] int d,i,j,teller=0; ^ ../../../src/tools/gmx_helixorient.c:80:18: warning: unused variable 'dx' [-Wunused-variable] rvec *x=NULL,dx; ^ In file included from ../../../src/tools/gmx_helixorient.c:45:0: ../../../src/tools/gmx_helixorient.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_helixorient.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_helixorient.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_helixorient.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_clustsize.c -fPIC -DPIC -o .libs/gmx_clustsize.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wham.lo ../../../src/tools/gmx_wham.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_mdmat.c -fPIC -DPIC -o .libs/gmx_mdmat.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o correl.lo ../../../src/tools/correl.c ../../../src/tools/gmx_clustsize.c: In function 'clust_size': ../../../src/tools/gmx_clustsize.c:94:50: warning: unused variable 'n_y' [-Wunused-variable] int i,j,k,ai,aj,ak,ci,cj,nframe,nclust,n_x,n_y,max_size=0; ^ ../../../src/tools/gmx_clustsize.c:94:23: warning: unused variable 'ak' [-Wunused-variable] int i,j,k,ai,aj,ak,ci,cj,nframe,nclust,n_x,n_y,max_size=0; ^ ../../../src/tools/gmx_clustsize.c:89:40: warning: unused variable 'nsame' [-Wunused-variable] int version,generation,sss,ii,jj,nsame; ^ ../../../src/tools/gmx_clustsize.c: In function 'gmx_clustsize': ../../../src/tools/gmx_clustsize.c:396:18: warning: unused variable 'bRDF' [-Wunused-variable] bool bSQ,bRDF; ^ ../../../src/tools/gmx_clustsize.c:396:14: warning: unused variable 'bSQ' [-Wunused-variable] bool bSQ,bRDF; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_clustsize.c:47: ../../../src/tools/gmx_clustsize.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_clustsize.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_clustsize.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_clustsize.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/pme.h:46:0, from ../../../src/tools/gmx_clustsize.c:62: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/tools/gmx_mdmat.c: In function 'gmx_mdmat': ../../../src/tools/gmx_mdmat.c:193:14: warning: unused variable 'nr0' [-Wunused-variable] int nr0; ^ ../../../src/tools/gmx_mdmat.c:192:45: warning: unused variable 'it' [-Wunused-variable] int i,j,status,nres,natoms,nframes,it,trxnat; ^ ../../../src/tools/gmx_mdmat.c:165:15: warning: unused variable 'bAtom' [-Wunused-variable] static bool bAtom=FALSE; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_mdmat.c:44: ../../../src/tools/gmx_mdmat.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_mdmat.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_mdmat.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_mdmat.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_wham.c -fPIC -DPIC -o .libs/gmx_wham.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_wham.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_wham.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_wham.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_wham.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/correl.c -fPIC -DPIC -o .libs/correl.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sham.lo ../../../src/tools/gmx_sham.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmtraj.lo ../../../src/tools/gmx_nmtraj.c ../../../src/tools/correl.c: In function 'complex_mult': ../../../src/tools/correl.c:189:10: warning: unused variable 'no2' [-Wunused-variable] int i,no2,n_2,k; ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.c:43: ../../../src/tools/correl.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sham.c -fPIC -DPIC -o .libs/gmx_sham.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjconv.lo ../../../src/tools/gmx_trjconv.c ../../../src/tools/gmx_sham.c: In function 'do_sham': ../../../src/tools/gmx_sham.c:286:32: warning: unused variable 'd' [-Wunused-variable] int i,j,k,imin,len,index,d,*nbin,*bindex,bi; ^ ../../../src/tools/gmx_sham.c: In function 'gmx_sham': ../../../src/tools/gmx_sham.c:778:41: warning: unused variable 'db' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:36: warning: unused variable 'cum4' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:31: warning: unused variable 'cum3' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:26: warning: unused variable 'cum2' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:21: warning: unused variable 'cum1' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:17: warning: unused variable 'sig' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:13: warning: unused variable 'av' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:776:66: warning: unused variable 'error' [-Wunused-variable] real **val,**et_val,**dt_val,*t,*e_t,e_dt,d_dt,*d_t,dt,tot,error; ^ ../../../src/tools/gmx_sham.c:776:62: warning: unused variable 'tot' [-Wunused-variable] real **val,**et_val,**dt_val,*t,*e_t,e_dt,d_dt,*d_t,dt,tot,error; ^ ../../../src/tools/gmx_sham.c:775:51: warning: unused variable 'j' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:775:28: warning: unused variable 's' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:775:22: warning: unused variable 'nlast' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:774:13: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ ../../../src/tools/gmx_sham.c:728:35: warning: unused variable 'resol' [-Wunused-variable] static int nsets_in=1,nb_min=4,resol=10,nlevels=25; ^ ../../../src/tools/gmx_sham.c:728:26: warning: unused variable 'nb_min' [-Wunused-variable] static int nsets_in=1,nb_min=4,resol=10,nlevels=25; ^ ../../../src/tools/gmx_sham.c:723:15: warning: unused variable 'bShamEner' [-Wunused-variable] static bool bShamEner=TRUE,bSham=TRUE; ^ ../../../src/tools/gmx_sham.c:722:56: warning: unused variable 'bPower' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:41: warning: unused variable 'bEeFitAc' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:28: warning: unused variable 'bEENLC' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:15: warning: unused variable 'bEESEF' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:721:66: warning: unused variable 'bXYdy' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:721:50: warning: unused variable 'bAverCorr' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:721:38: warning: unused variable 'bSubAv' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:720:36: warning: unused variable 'filtlen' [-Wunused-variable] static real tb=-1,te=-1,frac=0.5,filtlen=0,binwidth=0.1; ^ ../../../src/tools/gmx_sham.c:720:27: warning: unused variable 'frac' [-Wunused-variable] static real tb=-1,te=-1,frac=0.5,filtlen=0,binwidth=0.1; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sham.c:41: ../../../src/tools/gmx_sham.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sham.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sham.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sham.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_sham.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjcat.lo ../../../src/tools/gmx_trjcat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmtraj.c -fPIC -DPIC -o .libs/gmx_nmtraj.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjorder.lo ../../../src/tools/gmx_trjorder.c ../../../src/tools/gmx_nmtraj.c: In function 'gmx_nmtraj': ../../../src/tools/gmx_nmtraj.c:129:14: warning: variable 'dum' set but not used [-Wunused-but-set-variable] real dum; ^ ../../../src/tools/gmx_nmtraj.c:124:14: warning: unused variable 'found' [-Wunused-variable] bool found; ^ ../../../src/tools/gmx_nmtraj.c:123:25: warning: unused variable 'sum' [-Wunused-variable] real omega,Ekin,sum,m,vel; ^ ../../../src/tools/gmx_nmtraj.c:121:15: warning: unused variable 'out_eigval' [-Wunused-variable] real *out_eigval; ^ ../../../src/tools/gmx_nmtraj.c:115:14: warning: unused variable 'neigval' [-Wunused-variable] int neigval; ^ ../../../src/tools/gmx_nmtraj.c:113:14: warning: unused variable 'grpname' [-Wunused-variable] char * grpname; ^ ../../../src/tools/gmx_nmtraj.c:111:14: warning: unused variable 'indexfile' [-Wunused-variable] char * indexfile; ^ ../../../src/tools/gmx_nmtraj.c:109:30: warning: unused variable 'v' [-Wunused-variable] int i,j,k,kmode,d,s,v; ^ ../../../src/tools/gmx_nmtraj.c:109:28: warning: unused variable 's' [-Wunused-variable] int i,j,k,kmode,d,s,v; ^ ../../../src/tools/gmx_nmtraj.c:105:15: warning: unused variable 'eigvalnr' [-Wunused-variable] int *eigvalnr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmtraj.c:43: ../../../src/tools/gmx_nmtraj.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmtraj.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmtraj.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmtraj.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_nmtraj.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjconv.c -fPIC -DPIC -o .libs/gmx_trjconv.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_xpm2ps.lo ../../../src/tools/gmx_xpm2ps.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjcat.c -fPIC -DPIC -o .libs/gmx_trjcat.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjorder.c -fPIC -DPIC -o .libs/gmx_trjorder.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjorder.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjorder.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjorder.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_trjorder.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_editconf.lo ../../../src/tools/gmx_editconf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_xpm2ps.c -fPIC -DPIC -o .libs/gmx_xpm2ps.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genbox.lo ../../../src/tools/gmx_genbox.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_editconf.c -fPIC -DPIC -o .libs/gmx_editconf.o ../../../src/tools/gmx_trjcat.c: In function 'scan_trj_files': ../../../src/tools/gmx_trjcat.c:78:8: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_trjcat.c: In function 'gmx_trjcat': ../../../src/tools/gmx_trjcat.c:392:58: warning: unused variable 'last_ok_step' [-Wunused-variable] int earliersteps,nfile_in,nfile_out,*cont_type,last_ok_step; ^ ../../../src/tools/gmx_trjcat.c:388:34: warning: unused variable 'in_file' [-Wunused-variable] char **fnms,**fnms_out,*in_file,*out_file; ^ ../../../src/tools/gmx_trjcat.c:385:19: warning: unused variable 'v' [-Wunused-variable] rvec *x,*v; ^ ../../../src/tools/gmx_trjcat.c:385:16: warning: unused variable 'x' [-Wunused-variable] rvec *x,*v; ^ ../../../src/tools/gmx_trjcat.c:384:53: warning: unused variable 'trjout' [-Wunused-variable] int status,ftpin,i,frame,frame_out,step=0,trjout=0; ^ ../../../src/tools/gmx_trjcat.c:384:22: warning: unused variable 'ftpin' [-Wunused-variable] int status,ftpin,i,frame,frame_out,step=0,trjout=0; ^ In file included from ../../../src/tools/gmx_trjcat.c:46:0: ../../../src/tools/gmx_trjcat.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjcat.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_trjcat.c:52:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjcat.c:56: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjcat.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_trjconv.c: In function 'calc_pbc_cluster': ../../../src/tools/gmx_trjconv.c:89:34: warning: unused variable 'is' [-Wunused-variable] int m,i,j,j0,j1,jj,ai,iter,is; ^ ../../../src/tools/gmx_trjconv.c: In function 'put_molecule_com_in_box': ../../../src/tools/gmx_trjconv.c:252:29: warning: unused variable 'dx' [-Wunused-variable] rvec com,new_com,shift,dx,box_center; ^ ../../../src/tools/gmx_trjconv.c: In function 'put_residue_com_in_box': ../../../src/tools/gmx_trjconv.c:303:37: warning: variable 'res_nat' set but not used [-Wunused-but-set-variable] atom_id i, j, res_start, res_end, res_nat; ^ ../../../src/tools/gmx_trjconv.c: In function 'gmx_trjconv': ../../../src/tools/gmx_trjconv.c:726:16: warning: unused variable 'xdr' [-Wunused-variable] int xdr=0; ^ ../../../src/tools/gmx_trjconv.c:725:42: warning: unused variable 'command' [-Wunused-variable] char top_title[256],title[256],command[256],filemode[5]; ^ ../../../src/tools/gmx_trjconv.c:715:21: warning: variable 'bFitXY' set but not used [-Wunused-but-set-variable] bool bFit,bFitXY,bPFit,bReset; ^ ../../../src/tools/gmx_trjconv.c:707:25: warning: unused variable 'gn_rms' [-Wunused-variable] char *gn_fit,*gn_rms; ^ ../../../src/tools/gmx_trjconv.c:706:26: warning: unused variable 'ind_rms' [-Wunused-variable] atom_id *ind_fit,*ind_rms; ^ ../../../src/tools/gmx_trjconv.c:705:21: warning: unused variable 'irms' [-Wunused-variable] int ifit,irms,my_clust=-1; ^ ../../../src/tools/gmx_trjconv.c:695:55: warning: unused variable 'nre' [-Wunused-variable] int m,i,d,frame,outframe,natoms,nout,ncent,nre,newstep=0,model_nr; ^ ../../../src/tools/gmx_trjconv.c:694:23: warning: unused variable 'lambda' [-Wunused-variable] real xtcpr, lambda,*w_rls=NULL; ^ ../../../src/tools/gmx_trjconv.c:694:16: warning: unused variable 'xtcpr' [-Wunused-variable] real xtcpr, lambda,*w_rls=NULL; ^ ../../../src/tools/gmx_trjconv.c:693:49: warning: unused variable 'dx' [-Wunused-variable] rvec *xp=NULL,x_shift,hbox,box_center,dx; ^ ../../../src/tools/gmx_trjconv.c:693:38: warning: unused variable 'box_center' [-Wunused-variable] rvec *xp=NULL,x_shift,hbox,box_center,dx; ^ In file included from ../../../src/tools/gmx_trjconv.c:47:0: ../../../src/tools/gmx_trjconv.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjconv.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_trjconv.c:53:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjconv.c:57: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjconv.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genbox.c -fPIC -DPIC -o .libs/gmx_genbox.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genion.lo ../../../src/tools/gmx_genion.c ../../../src/tools/gmx_xpm2ps.c: In function 'xpm_mat': ../../../src/tools/gmx_xpm2ps.c:559:14: warning: unused variable 'k' [-Wunused-variable] int i,j,k,x,y,col; ^ ../../../src/tools/gmx_xpm2ps.c:559:12: warning: unused variable 'j' [-Wunused-variable] int i,j,k,x,y,col; ^ ../../../src/tools/gmx_xpm2ps.c:558:10: warning: unused variable 'buf' [-Wunused-variable] char buf[100]; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'tick_spacing': ../../../src/tools/gmx_xpm2ps.c:599:18: warning: unused variable 'bFive' [-Wunused-variable] bool bTryAgain,bFive; ^ ../../../src/tools/gmx_editconf.c: In function 'calc_geom': ../../../src/tools/gmx_editconf.c:103:12: warning: unused variable 'grpnames' [-Wunused-variable] char *grpnames; ^ ../../../src/tools/gmx_editconf.c: In function 'set_pdb_conf_bfac': ../../../src/tools/gmx_editconf.c:195:9: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ ../../../src/tools/gmx_editconf.c: In function 'gmx_editconf': ../../../src/tools/gmx_editconf.c:518:35: warning: unused variable 'zcent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:29: warning: unused variable 'ycent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:23: warning: unused variable 'xcent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:20: warning: unused variable 'zs' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:17: warning: unused variable 'ys' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:14: warning: unused variable 'xs' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:516:38: warning: unused variable 'bCubic' [-Wunused-variable] bool bIndex,bSetSize,bSetAng,bCubic,bDist,bSetCenter; ^ ../../../src/tools/gmx_editconf.c:512:30: warning: unused variable 'tindex' [-Wunused-variable] atom_id *index,*sindex,*tindex; ^ ../../../src/tools/gmx_editconf.c:511:26: warning: unused variable 'tsize' [-Wunused-variable] int isize,ssize,tsize; ^ ../../../src/tools/gmx_editconf.c:456:33: warning: unused variable 'to_diam' [-Wunused-variable] static real dist=0.0,rbox=0.0,to_diam=0.0; ^ ../../../src/tools/gmx_editconf.c:456:24: warning: unused variable 'rbox' [-Wunused-variable] static real dist=0.0,rbox=0.0,to_diam=0.0; ^ In file included from ../../../src/tools/gmx_editconf.c:43:0: ../../../src/tools/gmx_editconf.c: At top level: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/tools/gmx_editconf.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_editconf.c:49: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_editconf.c:53: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_editconf.c:53:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_editconf.c:79:14: warning: 'pdbtp' defined but not used [-Wunused-variable] static char *pdbtp[epdbNR]={"ATOM ","HETATM"}; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'ps_mat': ../../../src/tools/gmx_xpm2ps.c:644:12: warning: unused variable 'j' [-Wunused-variable] int i,j,x,y,col,leg=0; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'write_combined_matrix': ../../../src/tools/gmx_xpm2ps.c:919:14: warning: unused variable 'map' [-Wunused-variable] t_mapping *map=NULL; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'gmx_xpm2ps': ../../../src/tools/gmx_xpm2ps.c:1127:56: warning: unused variable 'bAdd' [-Wunused-variable] static bool bFrame=TRUE,bZeroLine=FALSE,bYonce=FALSE,bAdd=FALSE; ^ In file included from ../../../src/tools/gmx_xpm2ps.c:42:0: ../../../src/tools/gmx_xpm2ps.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_xpm2ps.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/gmx_genbox.c: In function 'gmx_genbox': ../../../src/tools/gmx_genbox.c:665:11: warning: unused variable 'pbc' [-Wunused-variable] t_pbc pbc; ^ In file included from ../../../src/tools/gmx_genbox.c:47:0: ../../../src/tools/gmx_genbox.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_genbox.c:55: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genbox.c:55:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genbox.c:57: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genbox.c:61:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genion.c -fPIC -DPIC -o .libs/gmx_genion.o ../../../src/tools/gmx_genion.c: In function 'insert_ion': ../../../src/tools/gmx_genion.c:72:8: warning: unused variable 'xei' [-Wunused-variable] rvec xei,dx; ^ ../../../src/tools/gmx_genion.c:70:29: warning: unused variable 'm' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ ../../../src/tools/gmx_genion.c:70:23: warning: unused variable 'wlast' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ ../../../src/tools/gmx_genion.c:70:16: warning: unused variable 'owater' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ In file included from ../../../src/tools/gmx_genion.c:41:0: ../../../src/tools/gmx_genion.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genion.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genion.c:48:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/tools/gmx_genion.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genion.c:54:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genconf.lo ../../../src/tools/gmx_genconf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genpr.lo ../../../src/tools/gmx_genpr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genconf.c -fPIC -DPIC -o .libs/gmx_genconf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genpr.c -fPIC -DPIC -o .libs/gmx_genpr.o In file included from ../../../src/tools/gmx_genconf.c:40:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genconf.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genconf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genconf.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_genconf.c:93:13: warning: 'move_x' defined but not used [-Wunused-function] static void move_x(int natoms,rvec x[],matrix box) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genpr.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genpr.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_genpr.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genpr.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_eneconv.lo ../../../src/tools/gmx_eneconv.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_vanhove.lo ../../../src/tools/gmx_vanhove.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wheel.lo ../../../src/tools/gmx_wheel.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_eneconv.c -fPIC -DPIC -o .libs/gmx_eneconv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_vanhove.c -fPIC -DPIC -o .libs/gmx_vanhove.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_wheel.c -fPIC -DPIC -o .libs/gmx_wheel.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o addconf.lo ../../../src/tools/addconf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcpot.lo ../../../src/tools/calcpot.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_wheel.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_wheel.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_wheel.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_wheel.c:55: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o edittop.lo ../../../src/tools/edittop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_dssp.o ../../../src/tools/do_dssp.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/calcpot.c -fPIC -DPIC -o .libs/calcpot.o ../../../src/tools/gmx_eneconv.c: In function 'gmx_eneconv': ../../../src/tools/gmx_eneconv.c:427:14: warning: unused variable 'ok' [-Wunused-variable] bool ok; ^ ../../../src/tools/gmx_eneconv.c:426:35: warning: unused variable 'chptr' [-Wunused-variable] char inputstring[STRLEN],*chptr; ^ ../../../src/tools/gmx_eneconv.c:426:14: warning: unused variable 'inputstring' [-Wunused-variable] char inputstring[STRLEN],*chptr; ^ ../../../src/tools/gmx_eneconv.c:425:42: warning: unused variable 't1' [-Wunused-variable] real *readtime,*settime,timestep,t1,tadjust; ^ ../../../src/tools/gmx_eneconv.c:421:42: warning: unused variable 'j' [-Wunused-variable] int nre,nremax,this_nre,nfile,i,j,kkk,nset,*set=NULL; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_eneconv.c:45: ../../../src/tools/gmx_eneconv.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_eneconv.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_eneconv.c:101:13: warning: 'same_time' defined but not used [-Wunused-function] static bool same_time(real t1,real t2) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/addconf.c -fPIC -DPIC -o .libs/addconf.o ../../../src/tools/do_dssp.c: In function 'main': ../../../src/tools/do_dssp.c:347:16: warning: unused variable 'j' [-Wunused-variable] int i,j,natoms,nframe=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/do_dssp.c:47: ../../../src/tools/do_dssp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/do_dssp.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/do_dssp.c:49:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_vanhove.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_vanhove.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_vanhove.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_vanhove.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../src/tools/addconf.c: In function 'do_nsgrid': ../../../src/tools/addconf.c:205:14: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/addconf.c: In function 'add_conf': ../../../src/tools/addconf.c:328:23: warning: unused variable 'xpp' [-Wunused-variable] rvec dx,xi,xj,xpp,*x_all,*v_all; ^ ../../../src/tools/addconf.c:326:34: warning: unused variable 'dz1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:30: warning: unused variable 'dz0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:26: warning: unused variable 'dy1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:22: warning: unused variable 'dy0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:18: warning: unused variable 'dx1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:14: warning: unused variable 'dx0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:325:44: warning: unused variable 'maxincell' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:37: warning: unused variable 'ncells' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:35: warning: unused variable 'k' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:33: warning: unused variable 'd' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:19: warning: unused variable 'resnr' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:324:47: warning: unused variable 'iprot' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:324:21: warning: unused variable 'm' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:324:18: warning: unused variable 'jj' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:322:47: warning: unused variable 'ib2' [-Wunused-variable] real max_vdw,*r_prot,*r_all,n2,r2,ib1,ib2; ^ ../../../src/tools/addconf.c:322:43: warning: unused variable 'ib1' [-Wunused-variable] real max_vdw,*r_prot,*r_all,n2,r2,ib1,ib2; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/addconf.c:42: ../../../src/tools/addconf.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/addconf.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/addconf.c:46:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/addconf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/addconf.c:70:13: warning: 'set_margin' defined but not used [-Wunused-function] static void set_margin(t_atoms *atoms, rvec *x, real *r) ^ ../../../src/tools/calcpot.c: In function 'c_tabpot': ../../../src/tools/calcpot.c:79:8: warning: unused variable 'qqO' [-Wunused-variable] real qqO,qj; ^ ../../../src/tools/calcpot.c:78:43: warning: unused variable 'rinv2O' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:24: warning: unused variable 'fsO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:20: warning: unused variable 'vcO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:16: warning: unused variable 'tzO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:12: warning: unused variable 'tyO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:8: warning: unused variable 'txO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:76:28: warning: unused variable 'fzO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:24: warning: unused variable 'fyO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:20: warning: unused variable 'fxO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:16: warning: unused variable 'fzJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:12: warning: unused variable 'fyJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:8: warning: unused variable 'fxJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:75:38: warning: unused variable 'ggid' [-Wunused-variable] int ii,k,n,jnr,ii3,nj0,nj1,is3,j3,ggid; ^ ../../../src/tools/calcpot.c:71:50: warning: unused variable 'FF' [-Wunused-variable] real r1,r1t,fijC,eps,eps2,Y,F,Fp,Geps,Heps2,VV,FF; ^ ../../../src/tools/calcpot.c:71:15: warning: unused variable 'fijC' [-Wunused-variable] real r1,r1t,fijC,eps,eps2,Y,F,Fp,Geps,Heps2,VV,FF; ^ ../../../src/tools/calcpot.c:70:14: warning: unused variable 'two' [-Wunused-variable] const real two = 2.000000; ^ ../../../src/tools/calcpot.c: In function 'calc_pot': ../../../src/tools/calcpot.c:176:15: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ ../../../src/tools/calcpot.c: In function 'init_calcpot': ../../../src/tools/calcpot.c:238:12: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/calcpot.c:40: ../../../src/tools/calcpot.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/calcpot.c:40:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/calcpot.c:46:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/edittop.c -fPIC -DPIC -o .libs/edittop.o ../../../src/tools/edittop.c: In function 'delete_from_block': ../../../src/tools/edittop.c:104:17: warning: unused variable 'k' [-Wunused-variable] int i,i1,j1,j,k; ^ ../../../src/tools/edittop.c:104:12: warning: unused variable 'j1' [-Wunused-variable] int i,i1,j1,j,k; ^ ../../../src/tools/edittop.c: In function 'delete_atom': ../../../src/tools/edittop.c:161:7: warning: unused variable 'k' [-Wunused-variable] int k; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o editconf.o ../../../src/tools/editconf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eneconv.o ../../../src/tools/eneconv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genbox.o ../../../src/tools/genbox.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genconf.o ../../../src/tools/genconf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genrestr.o ../../../src/tools/genrestr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmtraj.o ../../../src/tools/g_nmtraj.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o make_ndx.o ../../../src/tools/make_ndx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mk_angndx.o ../../../src/tools/mk_angndx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjcat.o ../../../src/tools/trjcat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjconv.o ../../../src/tools/trjconv.c In file included from ../../../src/tools/mk_angndx.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/mk_angndx.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjorder.o ../../../src/tools/trjorder.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wheel.o ../../../src/tools/wheel.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xpm2ps.o ../../../src/tools/xpm2ps.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genion.o ../../../src/tools/genion.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/make_ndx.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/make_ndx.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/make_ndx.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/make_ndx.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o anadock.o ../../../src/tools/anadock.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o make_edi.o ../../../src/tools/make_edi.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_analyze.o ../../../src/tools/g_analyze.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_anaeig.o ../../../src/tools/g_anaeig.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_angle.o ../../../src/tools/g_angle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_bond.o ../../../src/tools/g_bond.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_bundle.o ../../../src/tools/g_bundle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_chi.o ../../../src/tools/g_chi.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_cluster.o ../../../src/tools/g_cluster.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_confrms.o ../../../src/tools/g_confrms.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_covar.o ../../../src/tools/g_covar.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_current.o ../../../src/tools/g_current.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_density.o ../../../src/tools/g_density.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_densmap.o ../../../src/tools/g_densmap.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dih.o ../../../src/tools/g_dih.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dielectric.o ../../../src/tools/g_dielectric.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_helixorient.o ../../../src/tools/g_helixorient.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_principal.o ../../../src/tools/g_principal.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dipoles.o ../../../src/tools/g_dipoles.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_disre.o ../../../src/tools/g_disre.c ../../../src/tools/anadock.c: In function 'rmsd_dist': ../../../src/tools/anadock.c:197:13: warning: variable 'dist' set but not used [-Wunused-but-set-variable] real rmsd,dist; ^ In file included from ../../../src/tools/anadock.c:41:0: ../../../src/tools/anadock.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/anadock.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/anadock.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/anadock.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dist.o ../../../src/tools/g_dist.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dyndom.o ../../../src/tools/g_dyndom.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_enemat.o ../../../src/tools/g_enemat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_energy.o ../../../src/tools/g_energy.c ../../../src/tools/make_edi.c: In function 'main': ../../../src/tools/make_edi.c:640:10: warning: variable 'bTop' set but not used [-Wunused-but-set-variable] bool bTop, bFit1; ^ In file included from ../../../src/tools/make_edi.c:43:0: ../../../src/tools/make_edi.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/make_edi.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/make_edi.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/make_edi.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/make_edi.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_lie.o ../../../src/tools/g_lie.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_filter.o ../../../src/tools/g_filter.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_gyrate.o ../../../src/tools/g_gyrate.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_h2order.o ../../../src/tools/g_h2order.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_hbond.o ../../../src/tools/g_hbond.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_helix.o ../../../src/tools/g_helix.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_mindist.o ../../../src/tools/g_mindist.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_msd.o ../../../src/tools/g_msd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_morph.o ../../../src/tools/g_morph.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmeig.o ../../../src/tools/g_nmeig.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmens.o ../../../src/tools/g_nmens.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_order.o ../../../src/tools/g_order.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_polystat.o ../../../src/tools/g_polystat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_potential.o ../../../src/tools/g_potential.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rama.o ../../../src/tools/g_rama.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rdf.o ../../../src/tools/g_rdf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rms.o ../../../src/tools/g_rms.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rmsdist.o ../../../src/tools/g_rmsdist.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rmsf.o ../../../src/tools/g_rmsf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rotacf.o ../../../src/tools/g_rotacf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_saltbr.o ../../../src/tools/g_saltbr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sas.o ../../../src/tools/g_sas.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sgangle.o ../../../src/tools/g_sgangle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sham.o ../../../src/tools/g_sham.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sorient.o ../../../src/tools/g_sorient.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_spol.o ../../../src/tools/g_spol.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sdf.o ../../../src/tools/g_sdf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_spatial.o ../../../src/tools/g_spatial.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_tcaf.o ../../../src/tools/g_tcaf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_traj.o ../../../src/tools/g_traj.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_vanhove.o ../../../src/tools/g_vanhove.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_velacc.o ../../../src/tools/g_velacc.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_clustsize.o ../../../src/tools/g_clustsize.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_mdmat.o ../../../src/tools/g_mdmat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_wham.o ../../../src/tools/g_wham.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_kinetics.o ../../../src/tools/g_kinetics.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sigeps.o ../../../src/tools/sigeps.c ../../../src/tools/sigeps.c: In function 'main': ../../../src/tools/sigeps.c:106:42: warning: unused variable 'pp' [-Wunused-variable] real qq,x,oldx,minimum,mval,dp[2],pp[2]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/sigeps.c:43: ../../../src/tools/sigeps.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/sigeps.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/sigeps.c:47:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/sigeps.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/sigeps.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o libgmxana.la -rpath /usr/lib64 autocorr.lo expfit.lo polynomials.lo levenmar.lo anadih.lo pp2shift.lo dlist.lo eigio.lo lsq.lo cmat.lo eigensolver.lo nsc.lo hxprops.lo fitahx.lo gmx_analyze.lo gmx_anaeig.lo gmx_angle.lo gmx_bond.lo gmx_bundle.lo gmx_chi.lo gmx_cluster.lo gmx_confrms.lo gmx_covar.lo gmx_current.lo gmx_density.lo gmx_densmap.lo gmx_dih.lo gmx_dielectric.lo gmx_kinetics.lo gmx_spatial.lo gmx_dipoles.lo gmx_disre.lo gmx_dist.lo gmx_dyndom.lo gmx_enemat.lo gmx_energy.lo gmx_lie.lo gmx_filter.lo gmx_gyrate.lo gmx_h2order.lo gmx_hbond.lo gmx_helix.lo gmx_mindist.lo gmx_msd.lo gmx_morph.lo gmx_nmeig.lo gmx_nmens.lo gmx_order.lo gmx_principal.lo gmx_polystat.lo gmx_potential.lo gmx_rama.lo gmx_rdf.lo gmx_rms.lo gmx_rmsdist.lo gmx_rmsf.lo gmx_rotacf.lo gmx_saltbr.lo gmx_sas.lo gmx_sdf.lo gmx_sgangle.lo gmx_sorient.lo gmx_spol.lo gmx_tcaf.lo gmx_traj.lo gmx_velacc.lo gmx_helixorient.lo gmx_clustsize.lo gmx_mdmat.lo gmx_wham.lo correl.lo gmx_sham.lo gmx_nmtraj.lo gmx_trjconv.lo gmx_trjcat.lo gmx_trjorder.lo gmx_xpm2ps.lo gmx_editconf.lo gmx_genbox.lo gmx_genion.lo gmx_genconf.lo gmx_genpr.lo gmx_eneconv.lo gmx_vanhove.lo gmx_wheel.lo addconf.lo calcpot.lo edittop.lo ../gmxlib/libgmx.la ../mdlib/libmd.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte x86_64-alt-linux-gcc -shared .libs/autocorr.o .libs/expfit.o .libs/polynomials.o .libs/levenmar.o .libs/anadih.o .libs/pp2shift.o .libs/dlist.o .libs/eigio.o .libs/lsq.o .libs/cmat.o .libs/eigensolver.o .libs/nsc.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_analyze.o .libs/gmx_anaeig.o .libs/gmx_angle.o .libs/gmx_bond.o .libs/gmx_bundle.o .libs/gmx_chi.o .libs/gmx_cluster.o .libs/gmx_confrms.o .libs/gmx_covar.o .libs/gmx_current.o .libs/gmx_density.o .libs/gmx_densmap.o .libs/gmx_dih.o .libs/gmx_dielectric.o .libs/gmx_kinetics.o .libs/gmx_spatial.o .libs/gmx_dipoles.o .libs/gmx_disre.o .libs/gmx_dist.o .libs/gmx_dyndom.o .libs/gmx_enemat.o .libs/gmx_energy.o .libs/gmx_lie.o .libs/gmx_filter.o .libs/gmx_gyrate.o .libs/gmx_h2order.o .libs/gmx_hbond.o .libs/gmx_helix.o .libs/gmx_mindist.o .libs/gmx_msd.o .libs/gmx_morph.o .libs/gmx_nmeig.o .libs/gmx_nmens.o .libs/gmx_order.o .libs/gmx_principal.o .libs/gmx_polystat.o .libs/gmx_potential.o .libs/gmx_rama.o .libs/gmx_rdf.o .libs/gmx_rms.o .libs/gmx_rmsdist.o .libs/gmx_rmsf.o .libs/gmx_rotacf.o .libs/gmx_saltbr.o .libs/gmx_sas.o .libs/gmx_sdf.o .libs/gmx_sgangle.o .libs/gmx_sorient.o .libs/gmx_spol.o .libs/gmx_tcaf.o .libs/gmx_traj.o .libs/gmx_velacc.o .libs/gmx_helixorient.o .libs/gmx_clustsize.o .libs/gmx_mdmat.o .libs/gmx_wham.o .libs/correl.o .libs/gmx_sham.o .libs/gmx_nmtraj.o .libs/gmx_trjconv.o .libs/gmx_trjcat.o .libs/gmx_trjorder.o .libs/gmx_xpm2ps.o .libs/gmx_editconf.o .libs/gmx_genbox.o .libs/gmx_genion.o .libs/gmx_genconf.o .libs/gmx_genpr.o .libs/gmx_eneconv.o .libs/gmx_vanhove.o .libs/gmx_wheel.o .libs/addconf.o .libs/calcpot.o .libs/edittop.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/lib64/openmpi/lib ../gmxlib/.libs/libgmx.so ../mdlib/.libs/libmd.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-Rpath:/usr/lib64/openmpi/lib -Wl,-soname -Wl,libgmxana.so.5 -o .libs/libgmxana.so.5.0.0 (cd .libs && rm -f libgmxana.so.5 && ln -s libgmxana.so.5.0.0 libgmxana.so.5) (cd .libs && rm -f libgmxana.so && ln -s libgmxana.so.5.0.0 libgmxana.so) creating libgmxana.la (cd .libs && rm -f libgmxana.la && ln -s ../libgmxana.la libgmxana.la) /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o do_dssp do_dssp.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o editconf editconf.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_editconf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o eneconv eneconv.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_eneconv.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genbox genbox.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/addconf.o .libs/gmx_genbox.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genconf genconf.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_genconf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genrestr genrestr.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_genpr.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmtraj g_nmtraj.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/eigio.o .libs/gmx_nmtraj.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o make_ndx make_ndx.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genbox genbox.o .libs/addconf.o .libs/gmx_genbox.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genconf genconf.o .libs/gmx_genconf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/do_dssp do_dssp.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/eneconv eneconv.o .libs/gmx_eneconv.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/make_ndx make_ndx.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating do_dssp creating genbox DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmtraj g_nmtraj.o .libs/eigio.o .libs/gmx_nmtraj.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/editconf editconf.o .libs/gmx_editconf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genrestr genrestr.o .libs/gmx_genpr.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating genconf /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o mk_angndx mk_angndx.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjcat trjcat.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_trjcat.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjconv trjconv.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_trjconv.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating editconf /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjorder trjorder.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_trjorder.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating make_ndx /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o wheel wheel.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_wheel.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating eneconv creating g_nmtraj creating genrestr /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o xpm2ps xpm2ps.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_xpm2ps.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genion genion.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/calcpot.o .libs/gmx_genion.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o anadock anadock.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/lsq.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjconv trjconv.o .libs/gmx_trjconv.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjcat trjcat.o .libs/gmx_trjcat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating trjconv creating trjcat /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o make_edi make_edi.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/eigio.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_analyze g_analyze.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o .libs/gmx_analyze.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjorder trjorder.o .libs/gmx_trjorder.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/mk_angndx mk_angndx.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating trjorder /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_anaeig g_anaeig.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/eigio.o .libs/gmx_anaeig.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/xpm2ps xpm2ps.o .libs/gmx_xpm2ps.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating mk_angndx DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/anadock anadock.o .libs/lsq.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_angle g_angle.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_angle.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genion genion.o .libs/calcpot.o .libs/gmx_genion.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/wheel wheel.o .libs/gmx_wheel.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating genion /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_bond g_bond.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/lsq.o .libs/gmx_bond.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating wheel creating xpm2ps /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_bundle g_bundle.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_bundle.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating anadock /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_chi g_chi.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/pp2shift.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_chi.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_cluster g_cluster.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/eigensolver.o .libs/cmat.o .libs/gmx_cluster.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/make_edi make_edi.o .libs/eigio.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_analyze g_analyze.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o .libs/gmx_analyze.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating make_edi /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_confrms g_confrms.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_confrms.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_anaeig g_anaeig.o .libs/eigio.o .libs/gmx_anaeig.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_angle g_angle.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_angle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_analyze DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_bond g_bond.o .libs/lsq.o .libs/gmx_bond.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_covar g_covar.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_covar.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_angle DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_cluster g_cluster.o .libs/eigensolver.o .libs/cmat.o .libs/gmx_cluster.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_current g_current.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_current.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_chi g_chi.o .libs/pp2shift.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_chi.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_bond creating g_anaeig DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_bundle g_bundle.o .libs/gmx_bundle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_density g_density.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_density.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_densmap g_densmap.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_densmap.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_chi creating g_cluster /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dih g_dih.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_dih.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dielectric g_dielectric.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dielectric.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_bundle /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_helixorient g_helixorient.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_helixorient.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_confrms g_confrms.o .libs/gmx_confrms.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_confrms DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_covar g_covar.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_covar.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_principal g_principal.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_principal.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_covar /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dipoles g_dipoles.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/lsq.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dipoles.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_current g_current.o .libs/gmx_current.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_density g_density.o .libs/gmx_density.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dih g_dih.o .libs/gmx_dih.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_current DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dielectric g_dielectric.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dielectric.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_densmap g_densmap.o .libs/gmx_densmap.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_disre g_disre.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_disre.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_density creating g_dih /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dist g_dist.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_dist.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dyndom g_dyndom.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_dyndom.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_dielectric DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_helixorient g_helixorient.o .libs/gmx_helixorient.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_enemat g_enemat.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_enemat.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_densmap /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_energy g_energy.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_energy.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_helixorient /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_lie g_lie.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_lie.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_principal g_principal.o .libs/gmx_principal.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_principal DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dipoles g_dipoles.o .libs/lsq.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dipoles.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_filter g_filter.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_filter.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_dipoles /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_gyrate g_gyrate.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_gyrate.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_disre g_disre.o .libs/gmx_disre.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dist g_dist.o .libs/gmx_dist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dyndom g_dyndom.o .libs/gmx_dyndom.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_dist creating g_disre /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_h2order g_h2order.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_h2order.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_hbond g_hbond.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_dyndom DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_enemat g_enemat.o .libs/gmx_enemat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_helix g_helix.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/hxprops.o .libs/fitahx.o .libs/gmx_helix.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_lie g_lie.o .libs/gmx_lie.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_enemat DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_energy g_energy.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_energy.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_mindist g_mindist.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_mindist.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_lie /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_msd g_msd.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/lsq.o .libs/gmx_msd.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_energy /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_morph g_morph.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_morph.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_filter g_filter.o .libs/gmx_filter.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_filter /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmeig g_nmeig.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmeig.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_gyrate g_gyrate.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_gyrate.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_gyrate /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmens g_nmens.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmens.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_h2order g_h2order.o .libs/gmx_h2order.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_helix g_helix.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_helix.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_hbond g_hbond.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_mindist g_mindist.o .libs/gmx_mindist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_mindist /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_order g_order.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_order.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_msd g_msd.o .libs/lsq.o .libs/gmx_msd.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_h2order creating g_helix creating g_hbond /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_polystat g_polystat.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_polystat.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_potential g_potential.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_potential.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rama g_rama.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_rama.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_morph g_morph.o .libs/gmx_morph.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_msd /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rdf g_rdf.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rdf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_morph /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rms g_rms.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/cmat.o .libs/gmx_rms.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmeig g_nmeig.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmeig.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_nmeig /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rmsdist g_rmsdist.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_rmsdist.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmens g_nmens.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmens.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_nmens /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rmsf g_rmsf.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/eigensolver.o .libs/gmx_rmsf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_order g_order.o .libs/gmx_order.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_polystat g_polystat.o .libs/gmx_polystat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rama g_rama.o .libs/gmx_rama.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_potential g_potential.o .libs/gmx_potential.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_order creating g_rama creating g_polystat /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rotacf g_rotacf.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rotacf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rms g_rms.o .libs/cmat.o .libs/gmx_rms.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_saltbr g_saltbr.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_saltbr.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sas g_sas.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/nsc.o .libs/gmx_sas.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rdf g_rdf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rdf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_potential /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sgangle g_sgangle.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_sgangle.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_rms /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sham g_sham.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_sham.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_rdf /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sorient g_sorient.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_sorient.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rmsdist g_rmsdist.o .libs/gmx_rmsdist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rmsdist /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_spol g_spol.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_spol.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rmsf g_rmsf.o .libs/eigensolver.o .libs/gmx_rmsf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rotacf g_rotacf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rotacf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sas g_sas.o .libs/nsc.o .libs/gmx_sas.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_saltbr g_saltbr.o .libs/gmx_saltbr.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rmsf /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sdf g_sdf.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_sdf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sgangle g_sgangle.o .libs/gmx_sgangle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rotacf creating g_saltbr creating g_sas /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_spatial g_spatial.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_spatial.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sham g_sham.o .libs/gmx_sham.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_tcaf g_tcaf.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_tcaf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_traj g_traj.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_traj.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_sham creating g_sgangle /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_vanhove g_vanhove.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_vanhove.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sorient g_sorient.o .libs/gmx_sorient.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_velacc g_velacc.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_velacc.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_sorient /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_clustsize g_clustsize.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_clustsize.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_spol g_spol.o .libs/gmx_spol.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_spol /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_mdmat g_mdmat.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_mdmat.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_spatial g_spatial.o .libs/gmx_spatial.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sdf g_sdf.o .libs/gmx_sdf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_spatial DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_traj g_traj.o .libs/gmx_traj.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_wham g_wham.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_wham.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_sdf DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_vanhove g_vanhove.o .libs/gmx_vanhove.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_tcaf g_tcaf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_tcaf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_velacc g_velacc.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_velacc.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_kinetics g_kinetics.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la .libs/gmx_kinetics.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_traj creating g_tcaf /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o sigeps sigeps.o libgmxana.la ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte creating g_velacc creating g_vanhove DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_clustsize g_clustsize.o .libs/gmx_clustsize.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_clustsize DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_mdmat g_mdmat.o .libs/gmx_mdmat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_mdmat DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_wham g_wham.o .libs/gmx_wham.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_wham DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_kinetics g_kinetics.o .libs/gmx_kinetics.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/sigeps sigeps.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana.so ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.so /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating sigeps creating g_kinetics make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/tools' Making all in ngmx make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/ngmx' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ngmx.o ../../../src/ngmx/ngmx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xutil.o ../../../src/ngmx/xutil.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xmb.o ../../../src/ngmx/xmb.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o x11.o ../../../src/ngmx/x11.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlghi.o ../../../src/ngmx/xdlghi.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fgrid.o ../../../src/ngmx/fgrid.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlgitem.o ../../../src/ngmx/xdlgitem.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o popup.o ../../../src/ngmx/popup.c ../../../src/ngmx/ngmx.c: In function 'dump_xw': ../../../src/ngmx/ngmx.c:68:8: warning: variable 'rc' set but not used [-Wunused-but-set-variable] int rc; ^ ../../../src/ngmx/ngmx.c: In function 'init_gmx': ../../../src/ngmx/ngmx.c:354:35: warning: unused variable 'nre' [-Wunused-variable] int step,natom,nre,natom_trx; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/ngmx.c:49: ../../../src/ngmx/ngmx.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/ngmx/ngmx.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/ngmx/ngmx.c:65:13: warning: 'dump_xw' defined but not used [-Wunused-function] static void dump_xw(char *dispname,Window w,char *fn) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pulldown.o ../../../src/ngmx/pulldown.c ../../../src/ngmx/x11.c:132:13: warning: 'TestEvent' defined but not used [-Wunused-function] static Bool TestEvent(Display *disp,XEvent *event,char *arg) ^ ../../../src/ngmx/x11.c:265:13: warning: 'Xrm' defined but not used [-Wunused-function] static void Xrm(int *argc, char *argv[]) ^ ../../../src/ngmx/fgrid.c: In function 'GetBuf': ../../../src/ngmx/fgrid.c:101:7: warning: variable 'rc' set but not used [-Wunused-but-set-variable] int rc; ^ ../../../src/ngmx/fgrid.c: In function 'FGridFromFile': ../../../src/ngmx/fgrid.c:346:8: warning: unused variable 'newinfile' [-Wunused-variable] char newinfile[STRLEN]; ^ ../../../src/ngmx/fgrid.c:345:9: warning: unused variable 'gmxlib' [-Wunused-variable] char *gmxlib; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlg.o ../../../src/ngmx/xdlg.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o manager.o ../../../src/ngmx/manager.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o buttons.o ../../../src/ngmx/buttons.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nmol.o ../../../src/ngmx/nmol.c ../../../src/ngmx/manager.c: In function 'set_file': x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nleg.o ../../../src/ngmx/nleg.c ../../../src/ngmx/manager.c:182:18: warning: unused variable 'idum' [-Wunused-variable] int i,idum; ^ ../../../src/ngmx/manager.c: In function 'step_man': ../../../src/ngmx/manager.c:312:15: warning: unused variable 'dum' [-Wunused-variable] int dum; ^ ../../../src/ngmx/manager.c:311:15: warning: unused variable 'rdum' [-Wunused-variable] real rdum; ^ In file included from ../../../src/ngmx/manager.c:48:0: ../../../src/ngmx/manager.c: At top level: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dialogs.o ../../../src/ngmx/dialogs.c ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/ngmx/manager.c:55:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/ngmx/manager.c:56: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/ngmx/manager.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o logo.o ../../../src/ngmx/logo.c ../../../src/ngmx/nmol.c: In function 'draw_box': ../../../src/ngmx/nmol.c:422:23: warning: unused variable 'tv2' [-Wunused-variable] iv2 vec2[NCUCEDGE],tv2; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/ngmx/nmol.c:51: ../../../src/ngmx/nmol.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/ngmx/nmol.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o filter.o ../../../src/ngmx/filter.c ../../../src/ngmx/dialogs.c:240:13: warning: 'Extract' defined but not used [-Wunused-function] static void Extract(t_dlg *dlg,int ID,char *buf) ^ ../../../src/ngmx/dialogs.c:373:13: warning: 'in_set' defined but not used [-Wunused-function] static bool in_set(int i,int n,int set[]) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o molps.o ../../../src/ngmx/molps.c In file included from ../../../src/ngmx/logo.c:45:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xrama.o ../../../src/ngmx/xrama.c ../../../src/ngmx/molps.c: In function 'ps_draw_mol': ../../../src/ngmx/molps.c:204:15: warning: unused variable 'ntime' [-Wunused-variable] static int ntime=0; ^ ../../../src/ngmx/molps.c:203:15: warning: unused variable 'tstr' [-Wunused-variable] static char tstr[2][20]; ^ ../../../src/ngmx/xrama.c: In function 'main': ../../../src/ngmx/xrama.c:319:15: warning: variable 'ramatop' set but not used [-Wunused-but-set-variable] t_topology *ramatop; ^ In file included from ../../../src/ngmx/xrama.c:44:0: ../../../src/ngmx/xrama.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/xrama.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o highway.o ../../../src/ngmx/highway.c In file included from ../../../src/ngmx/highway.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/highway.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o xrama xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath mkdir .libs /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o highway highway.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd.la ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/xrama xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath creating ngmx creating xrama DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/highway highway.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd.so ../gmxlib/.libs/libgmx.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath creating highway make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/ngmx' Making all in contrib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/contrib' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/contrib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' Making all in admin make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/admin' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/admin' Making all in scripts make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/scripts' cat ../../scripts/GMXRC.in | sed 's,@bindir\@,/usr/bin,' > GMXRC cat ../../scripts/GMXRC.csh.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.csh cat ../../scripts/GMXRC.bash.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.bash cat ../../scripts/GMXRC.zsh.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.zsh make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/scripts' Making all in share make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' Making all in top make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/top' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/top' Making all in tutor make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' Making all in nmr1 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr1' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr1' Making all in nmr2 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr2' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr2' Making all in speptide make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/speptide' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/speptide' Making all in water make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/water' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/water' Making all in gmxdemo make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/gmxdemo' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/gmxdemo' Making all in methanol make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/methanol' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/methanol' Making all in mixed make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/mixed' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/mixed' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' Making all in template make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/template' cat ../../../share/template/Template.mak | \ sed 's,@LDFLAGS\@,-L/usr/lib64 -lgslcblas ,' | \ sed 's,@LIBS\@,-lmd -lgmx -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ,' | \ sed 's,@CFLAGS\@,-g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -I/usr/include -I/usr/include/gromacs,' | \ sed 's,@CC\@,x86_64-alt-linux-gcc,' | \ sed 's,@host\@,x86_64-alt-linux-gnu,' >Makefile.x86_64-alt-linux-gnu sed: -e expression #1, char 36: unknown option to `s' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/template' Making all in html make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' Making all in . make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' Making all in images make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/images' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/images' Making all in online make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/online' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/online' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' Making all in man make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' Making all in man1 make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man/man1' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man/man1' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' make[1]: Nothing to be done for `all-am'. make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' make: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' + popd ~/RPM/BUILD/gromacs-4.0.7 + mkdir double + pushd double ~/RPM/BUILD/gromacs-4.0.7/double ~/RPM/BUILD/gromacs-4.0.7 + buildThis double disable _d + ln -s ../configure . + CFLAGS='-pipe -Wall -g -O2' + export CFLAGS + CXXFLAGS='-pipe -Wall -g -O2' + export CXXFLAGS + FFLAGS='-pipe -Wall -g -O2' + export FFLAGS + '[' -n '' ']' ++ printf %s '-pipe -Wall -g -O2' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS= + export ASFLAGS + export lt_cv_prog_cc_static_works=no + lt_cv_prog_cc_static_works=no + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + ./configure --build=x86_64-alt-linux --host=x86_64-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --without-included-gettext --disable-rpath --enable-static=no --enable-shared --enable-double --enable-mpi --enable-prefetch-forces --enable-fortran --with-gnu-ld --with-fft=fftw3 --with-x --with-gsl --disable-mpi --program-suffix=_d --with-external-blas=-lopenblas configure: WARNING: unrecognized options: --without-included-gettext, --disable-rpath, --enable-prefetch-forces checking build system type... x86_64-alt-linux-gnu checking host system type... x86_64-alt-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '646' is supported by ustar format... yes checking whether GID '646' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking for x86_64-alt-linux-cc... no checking for x86_64-alt-linux-icc... no checking for x86_64-alt-linux-xlc... no checking for x86_64-alt-linux-gcc... x86_64-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-alt-linux-gcc accepts -g... yes checking for x86_64-alt-linux-gcc option to accept ISO C89... none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of x86_64-alt-linux-gcc... none checking for x86_64-alt-linux-f77... no checking for x86_64-alt-linux-ifort... no checking for x86_64-alt-linux-xlf... no checking for x86_64-alt-linux-xlf77... no checking for x86_64-alt-linux-cf77... no checking for x86_64-alt-linux-fl32... no checking for x86_64-alt-linux-g77... no checking for x86_64-alt-linux-fort77... no checking for x86_64-alt-linux-f90... no checking for x86_64-alt-linux-xlf90... no checking for x86_64-alt-linux-pgf77... no checking for x86_64-alt-linux-cf77... no checking for x86_64-alt-linux-fort... no checking for x86_64-alt-linux-fort77... no checking for x86_64-alt-linux-pgf90... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking dependency style of x86_64-alt-linux-gcc... none checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking how to run the C preprocessor... x86_64-alt-linux-gcc -E checking whether x86_64-alt-linux-gcc accepts -O3... yes checking whether x86_64-alt-linux-gcc accepts -funroll-all-loops... yes ****************************************** * Using CFLAGS from environment variable * ****************************************** ****************************************** * Using FFLAGS from environment variable * ****************************************** checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking size of int... 4 checking size of long int... 8 checking size of long long int... 8 checking size of off_t... 8 checking that size_t can hold pointers... yes checking floating-point format... IEEE754 (little-endian byte and word order) checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for a sed that does not truncate output... /bin/sed checking for ld used by x86_64-alt-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for /usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking how to recognise dependent libraries... (cached) pass_all checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking for x86_64-alt-linux-g++... x86_64-alt-linux-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-alt-linux-g++ accepts -g... yes checking dependency style of x86_64-alt-linux-g++... none checking how to run the C++ preprocessor... x86_64-alt-linux-g++ -E checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from x86_64-alt-linux-gcc object... ok checking for objdir... .libs checking for x86_64-alt-linux-ar... no checking for ar... ar checking for x86_64-alt-linux-ranlib... no checking for ranlib... ranlib checking for x86_64-alt-linux-strip... no checking for strip... strip checking if x86_64-alt-linux-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-alt-linux-gcc option to produce PIC... -fPIC checking if x86_64-alt-linux-gcc PIC flag -fPIC works... yes checking if x86_64-alt-linux-gcc static flag -static works... no checking if x86_64-alt-linux-gcc supports -c -o file.o... yes checking whether the x86_64-alt-linux-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by x86_64-alt-linux-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-alt-linux-g++ option to produce PIC... -fPIC checking if x86_64-alt-linux-g++ PIC flag -fPIC works... yes checking if x86_64-alt-linux-g++ static flag -static works... no checking if x86_64-alt-linux-g++ supports -c -o file.o... yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... no checking if f77 supports -c -o file.o... yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for sqrt in -lm... yes checking for fftw3.h... yes checking for main in -lfftw3... yes checking rpc/rpc.h usability... yes checking rpc/rpc.h presence... yes checking for rpc/rpc.h... yes checking for rpc/xdr.h... yes checking for xdr_float in -lnsl... yes checking for working memcmp... yes checking return type of signal handlers... void checking for off_t... yes checking for vprintf... yes checking for _doprnt... no checking if malloc debugging is wanted... no checking for strcasecmp... yes checking for strdup... yes checking for bool... no checking size of int... (cached) 4 checking size of long int... (cached) 8 checking size of long long int... (cached) 8 checking size of off_t... (cached) 8 checking size of void*... 8 checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking gsl/gsl_version.h usability... yes checking gsl/gsl_version.h presence... yes checking for gsl/gsl_version.h... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking libxml/parser.h usability... no checking libxml/parser.h presence... no checking for libxml/parser.h... no checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for inline... inline checking whether your compiler can handle assembly files (*.s)... yes checking whether as fully supports X86_64 SSE2... yes checking whether byte ordering is bigendian... (cached) no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/gmxlib/Makefile config.status: creating src/gmxlib/gmx_blas/Makefile config.status: creating src/gmxlib/gmx_lapack/Makefile config.status: creating src/gmxlib/nonbonded/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_3dnow/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse2/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ppc_altivec/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_single/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_double/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_bluegene/Makefile config.status: creating include/Makefile config.status: creating include/types/Makefile config.status: creating src/mdlib/Makefile config.status: creating src/kernel/Makefile config.status: creating src/tools/Makefile config.status: creating src/ngmx/Makefile config.status: creating src/contrib/Makefile config.status: creating scripts/Makefile config.status: creating admin/Makefile config.status: creating share/Makefile config.status: creating share/tutor/Makefile config.status: creating share/tutor/gmxdemo/Makefile config.status: creating share/tutor/nmr1/Makefile config.status: creating share/tutor/nmr2/Makefile config.status: creating share/tutor/water/Makefile config.status: creating share/tutor/mixed/Makefile config.status: creating share/tutor/methanol/Makefile config.status: creating share/tutor/speptide/Makefile config.status: creating share/template/Makefile config.status: creating share/top/Makefile config.status: creating share/html/Makefile config.status: creating share/html/images/Makefile config.status: creating share/html/online/Makefile config.status: creating man/Makefile config.status: creating man/man1/Makefile config.status: creating src/config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --without-included-gettext, --disable-rpath, --enable-prefetch-forces + sed -i 's|^hardcode_libdir_flag_spec=.*|hardcode_libdir_flag_spec=""|g' libtool + sed -i 's|^runpath_var=LD_RUN_PATH|runpath_var=DIE_RPATH_DIE|g' libtool + '[' -n 8 ']' + make -j8 make: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' Making all in include make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' Making all in . make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' Making all in types make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include/types' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include/types' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' Making all in src make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' make all-recursive make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' Making all in gmxlib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' Making all in nonbonded make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' Making all in nb_kernel_x86_64_sse2 make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel010_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel010_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel030_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel030_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel100_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel100_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel101_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel101_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel102_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel102_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel103_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel103_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel104_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel104_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel110_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel110_x86_64_sse2.s mkdir .libs x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel100_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel100_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel010_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel010_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel110_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel110_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel111_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel111_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel103_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel103_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel101_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel101_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel112_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel112_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel113_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel113_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel030_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel030_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel114_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel114_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel104_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel104_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel130_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel130_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel102_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel102_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel131_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel131_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel132_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel132_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel133_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel133_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel111_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel111_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel112_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel112_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel113_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel113_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel134_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel134_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel200_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel200_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel201_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel201_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel114_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel114_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel132_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel132_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel130_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel130_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel131_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel131_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel133_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel133_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel202_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel202_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel203_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel203_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel204_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel204_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel210_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel210_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel134_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel134_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel211_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel211_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel212_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel212_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel200_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel200_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel201_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel201_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel213_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel213_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel214_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel214_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel202_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel202_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel203_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel203_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel210_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel210_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel204_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel204_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel230_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel230_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel231_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel231_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel232_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel232_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel213_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel213_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel211_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel211_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel233_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel233_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel212_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel212_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel234_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel234_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel300_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel300_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel214_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel214_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel301_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel301_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel302_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel302_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel231_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel231_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel230_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel230_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel233_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel233_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel303_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel303_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel304_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel304_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel300_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel300_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel310_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel310_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel234_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel234_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel232_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel232_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel311_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel311_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel312_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel312_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel302_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel302_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel301_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel301_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel313_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel313_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel314_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel314_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel330_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel330_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel304_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel304_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel303_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel303_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel310_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel310_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel331_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel331_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel332_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel332_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel311_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel311_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel333_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel333_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel334_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel334_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel312_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel312_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel314_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel314_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel400_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel400_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel330_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel330_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel313_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel313_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel410_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel410_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel331_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel331_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel430_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel430_x86_64_sse2.s x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel332_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel332_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_x86_64_sse2_test.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel_x86_64_sse2_test.s /bin/sh ../../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2 -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel_x86_64_sse2.c x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel334_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel334_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel333_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel333_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel400_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel400_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel410_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel410_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel430_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel430_x86_64_sse2.o x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel_x86_64_sse2_test.s -fPIC -DPIC -o .libs/nb_kernel_x86_64_sse2_test.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2 -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel_x86_64_sse2.c -fPIC -DPIC -o .libs/nb_kernel_x86_64_sse2.o /bin/sh ../../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnb_kernel_x86_64_sse2.la nb_kernel010_x86_64_sse2.lo nb_kernel030_x86_64_sse2.lo nb_kernel100_x86_64_sse2.lo nb_kernel101_x86_64_sse2.lo nb_kernel102_x86_64_sse2.lo nb_kernel103_x86_64_sse2.lo nb_kernel104_x86_64_sse2.lo nb_kernel110_x86_64_sse2.lo nb_kernel111_x86_64_sse2.lo nb_kernel112_x86_64_sse2.lo nb_kernel113_x86_64_sse2.lo nb_kernel114_x86_64_sse2.lo nb_kernel130_x86_64_sse2.lo nb_kernel131_x86_64_sse2.lo nb_kernel132_x86_64_sse2.lo nb_kernel133_x86_64_sse2.lo nb_kernel134_x86_64_sse2.lo nb_kernel200_x86_64_sse2.lo nb_kernel201_x86_64_sse2.lo nb_kernel202_x86_64_sse2.lo nb_kernel203_x86_64_sse2.lo nb_kernel204_x86_64_sse2.lo nb_kernel210_x86_64_sse2.lo nb_kernel211_x86_64_sse2.lo nb_kernel212_x86_64_sse2.lo nb_kernel213_x86_64_sse2.lo nb_kernel214_x86_64_sse2.lo nb_kernel230_x86_64_sse2.lo nb_kernel231_x86_64_sse2.lo nb_kernel232_x86_64_sse2.lo nb_kernel233_x86_64_sse2.lo nb_kernel234_x86_64_sse2.lo nb_kernel300_x86_64_sse2.lo nb_kernel301_x86_64_sse2.lo nb_kernel302_x86_64_sse2.lo nb_kernel303_x86_64_sse2.lo nb_kernel304_x86_64_sse2.lo nb_kernel310_x86_64_sse2.lo nb_kernel311_x86_64_sse2.lo nb_kernel312_x86_64_sse2.lo nb_kernel313_x86_64_sse2.lo nb_kernel314_x86_64_sse2.lo nb_kernel330_x86_64_sse2.lo nb_kernel331_x86_64_sse2.lo nb_kernel332_x86_64_sse2.lo nb_kernel333_x86_64_sse2.lo nb_kernel334_x86_64_sse2.lo nb_kernel400_x86_64_sse2.lo nb_kernel410_x86_64_sse2.lo nb_kernel430_x86_64_sse2.lo nb_kernel_x86_64_sse2_test.lo nb_kernel_x86_64_sse2.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libnb_kernel_x86_64_sse2.a .libs/nb_kernel010_x86_64_sse2.o .libs/nb_kernel030_x86_64_sse2.o .libs/nb_kernel100_x86_64_sse2.o .libs/nb_kernel101_x86_64_sse2.o .libs/nb_kernel102_x86_64_sse2.o .libs/nb_kernel103_x86_64_sse2.o .libs/nb_kernel104_x86_64_sse2.o .libs/nb_kernel110_x86_64_sse2.o .libs/nb_kernel111_x86_64_sse2.o .libs/nb_kernel112_x86_64_sse2.o .libs/nb_kernel113_x86_64_sse2.o .libs/nb_kernel114_x86_64_sse2.o .libs/nb_kernel130_x86_64_sse2.o .libs/nb_kernel131_x86_64_sse2.o .libs/nb_kernel132_x86_64_sse2.o .libs/nb_kernel133_x86_64_sse2.o .libs/nb_kernel134_x86_64_sse2.o .libs/nb_kernel200_x86_64_sse2.o .libs/nb_kernel201_x86_64_sse2.o .libs/nb_kernel202_x86_64_sse2.o .libs/nb_kernel203_x86_64_sse2.o .libs/nb_kernel204_x86_64_sse2.o .libs/nb_kernel210_x86_64_sse2.o .libs/nb_kernel211_x86_64_sse2.o .libs/nb_kernel212_x86_64_sse2.o .libs/nb_kernel213_x86_64_sse2.o .libs/nb_kernel214_x86_64_sse2.o .libs/nb_kernel230_x86_64_sse2.o .libs/nb_kernel231_x86_64_sse2.o .libs/nb_kernel232_x86_64_sse2.o .libs/nb_kernel233_x86_64_sse2.o .libs/nb_kernel234_x86_64_sse2.o .libs/nb_kernel300_x86_64_sse2.o .libs/nb_kernel301_x86_64_sse2.o .libs/nb_kernel302_x86_64_sse2.o .libs/nb_kernel303_x86_64_sse2.o .libs/nb_kernel304_x86_64_sse2.o .libs/nb_kernel310_x86_64_sse2.o .libs/nb_kernel311_x86_64_sse2.o .libs/nb_kernel312_x86_64_sse2.o .libs/nb_kernel313_x86_64_sse2.o .libs/nb_kernel314_x86_64_sse2.o .libs/nb_kernel330_x86_64_sse2.o .libs/nb_kernel331_x86_64_sse2.o .libs/nb_kernel332_x86_64_sse2.o .libs/nb_kernel333_x86_64_sse2.o .libs/nb_kernel334_x86_64_sse2.o .libs/nb_kernel400_x86_64_sse2.o .libs/nb_kernel410_x86_64_sse2.o .libs/nb_kernel430_x86_64_sse2.o .libs/nb_kernel_x86_64_sse2_test.o .libs/nb_kernel_x86_64_sse2.o ranlib .libs/libnb_kernel_x86_64_sse2.a creating libnb_kernel_x86_64_sse2.la (cd .libs && rm -f libnb_kernel_x86_64_sse2.la && ln -s ../libnb_kernel_x86_64_sse2.la libnb_kernel_x86_64_sse2.la) make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' Making all in nb_kernel make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_metacode.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_metacode.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_common.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_common.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_declarations.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_declarations.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_outerloop.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_outerloop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_innerloop.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_innerloop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_interactions.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_interactions.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -o mknb mknb.o mknb_metacode.o mknb_common.o mknb_declarations.o mknb_outerloop.o mknb_innerloop.o mknb_interactions.o rm -f kernel-stamp ./mknb -double -software_invsqrt -fortran >>> Gromacs nonbonded kernel generator (-h for help) >>> Generating double precision functions in Fortran77. >>> Using Gromacs software version of 1/sqrt(x). Progress: 1% Progress: 2% Progress: 4% Progress: 5% Progress: 7% Progress: 8% Progress: 10% Progress: 11% Progress: 13% Progress: 14% Progress: 16% Progress: 17% Progress: 19% Progress: 20% Progress: 22% Progress: 23% Progress: 25% Progress: 26% Progress: 28% Progress: 29% Progress: 31% Progress: 32% Progress: 34% Progress: 35% Progress: 37% Progress: 38% Progress: 40% Progress: 41% Progress: 43% Progress: 44% Progress: 46% Progress: 47% Progress: 49% Progress: 50% Progress: 52% Progress: 53% Progress: 55% Progress: 56% Progress: 58% Progress: 59% Progress: 61% Progress: 62% Progress: 64% Progress: 65% Progress: 67% Progress: 68% Progress: 70% Progress: 71% Progress: 73% Progress: 74% Progress: 76% Progress: 77% Progress: 79% Progress: 80% Progress: 82% Progress: 83% Progress: 85% Progress: 86% Progress: 88% Progress: 89% Progress: 91% Progress: 92% Progress: 94% Progress: 95% Progress: 97% Progress: 98% Progress: 100% make all-am make[6]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' /bin/sh ../../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel.lo ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel.c /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel010_f.lo nb_kernel010_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel020_f.lo nb_kernel020_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel030_f.lo nb_kernel030_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel100_f.lo nb_kernel100_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel101_f.lo nb_kernel101_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel102_f.lo nb_kernel102_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel103_f.lo nb_kernel103_f.f mkdir .libs f77 -pipe -Wall -g -O2 -c nb_kernel010_f.f -fPIC -o .libs/nb_kernel010_f.o f77 -pipe -Wall -g -O2 -c nb_kernel101_f.f -fPIC -o .libs/nb_kernel101_f.o f77 -pipe -Wall -g -O2 -c nb_kernel020_f.f -fPIC -o .libs/nb_kernel020_f.o f77 -pipe -Wall -g -O2 -c nb_kernel102_f.f -fPIC -o .libs/nb_kernel102_f.o f77 -pipe -Wall -g -O2 -c nb_kernel030_f.f -fPIC -o .libs/nb_kernel030_f.o nb_kernel010_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:169:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:185:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:172:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:181:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:170:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:168:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:165:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:183:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:182:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:180:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:171:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:186:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:184:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:178:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:173:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:179:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:189:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel103_f.f -fPIC -o .libs/nb_kernel103_f.o nb_kernel101_f.f:153:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:162:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:171:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:374:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:383:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:392:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:284:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:271:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:280:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:267:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:264:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:282:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:281:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:279:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:270:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:285:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:283:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:274:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:277:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:273:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:275:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:278:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:276:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:288:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:129:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel020_f.f:287:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel020_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:198:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel100_f.f -fPIC -o .libs/nb_kernel100_f.o nb_kernel020_f.f:214:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:201:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:210:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:199:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:197:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:194:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:212:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:211:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:209:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:200:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:215:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:213:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:207:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:202:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:208:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:218:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel.c -fPIC -DPIC -o .libs/nb_kernel.o nb_kernel103_f.f:153:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:162:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel030_f.f:132:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:171:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel030_f.f:146:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel030_f.f:310:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel030_f.f:324:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel103_f.f:374:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:383:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:392:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:193:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:202:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:211:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:220:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:229:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:238:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:247:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:256:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:265:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:592:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:601:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:610:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:284:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:271:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:280:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:267:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:264:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:282:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:281:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:279:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:270:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:285:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:283:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:274:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:277:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:273:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:275:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:278:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:276:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:288:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:619:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:628:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:637:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:646:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:655:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel030_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:664:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel030_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:220:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:236:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:223:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:232:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:221:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:219:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:216:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:234:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:233:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:231:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:222:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:237:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:235:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:224:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:240:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:462:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:449:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:458:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:445:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:442:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:460:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:459:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:457:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:448:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:463:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:461:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:452:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:455:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:451:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:453:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:456:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:454:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:466:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:125:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel100_f.f:272:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel100_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:204:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:191:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:200:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:187:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:184:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:202:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:201:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:199:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:190:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:205:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:203:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:194:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:197:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:193:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:195:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:198:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:196:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:208:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel104_f.lo nb_kernel104_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel110_f.lo nb_kernel110_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel111_f.lo nb_kernel111_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel112_f.lo nb_kernel112_f.f f77 -pipe -Wall -g -O2 -c nb_kernel104_f.f -fPIC -o .libs/nb_kernel104_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel113_f.lo nb_kernel113_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel114_f.lo nb_kernel114_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel120_f.lo nb_kernel120_f.f nb_kernel104_f.f:193:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:202:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:211:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:220:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:229:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:238:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:247:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:256:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:265:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:592:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:601:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:610:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:619:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:628:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:637:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:646:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:655:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:664:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:462:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:449:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:458:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:445:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:442:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:460:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:459:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:457:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:448:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:463:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:461:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:452:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:455:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:451:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:453:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:456:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:454:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:466:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel111_f.f -fPIC -o .libs/nb_kernel111_f.o f77 -pipe -Wall -g -O2 -c nb_kernel110_f.f -fPIC -o .libs/nb_kernel110_f.o f77 -pipe -Wall -g -O2 -c nb_kernel112_f.f -fPIC -o .libs/nb_kernel112_f.o nb_kernel111_f.f:161:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:170:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:179:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:399:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:408:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:417:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:300:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:287:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:296:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:283:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:280:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:298:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:297:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:295:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:286:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:301:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:299:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:293:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:294:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:304:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel113_f.f -fPIC -o .libs/nb_kernel113_f.o nb_kernel110_f.f:133:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel110_f.f:297:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel110_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:220:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:207:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:216:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:203:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:200:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:218:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:217:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:215:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:206:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:221:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:219:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:213:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:214:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:224:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:202:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:211:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:220:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:229:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:238:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:247:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:256:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:265:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:274:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:616:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] f77 -pipe -Wall -g -O2 -c nb_kernel114_f.f -fPIC -o .libs/nb_kernel114_f.o nb_kernel112_f.f:625:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:634:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:643:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:652:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:661:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:670:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:679:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:688:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:476:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:463:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:472:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:459:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:456:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:474:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:473:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:471:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:462:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:477:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:475:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:469:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:470:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:480:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:174:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:183:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:192:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:435:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:444:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:453:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:326:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:313:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:322:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:309:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:306:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:324:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:323:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:321:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:312:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:327:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:325:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:319:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:320:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:330:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:219:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:228:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:237:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:246:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:255:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:264:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:273:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:282:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:291:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:660:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:669:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:678:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:687:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:696:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:705:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:714:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:723:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:732:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:506:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:493:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:502:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:489:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:486:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:504:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:503:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:501:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:492:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:507:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:505:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:499:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:500:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:510:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel120_f.f -fPIC -o .libs/nb_kernel120_f.o nb_kernel120_f.f:133:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:299:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:222:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:209:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:218:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:205:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:202:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:220:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:219:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:217:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:208:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:223:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:221:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:215:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:216:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:226:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel121_f.lo nb_kernel121_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel122_f.lo nb_kernel122_f.f f77 -pipe -Wall -g -O2 -c nb_kernel121_f.f -fPIC -o .libs/nb_kernel121_f.o nb_kernel121_f.f:161:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:170:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:179:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:401:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:410:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:419:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:302:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:289:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:298:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:285:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:282:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:300:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:299:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:297:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:288:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:303:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:301:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:295:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:296:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:306:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel123_f.lo nb_kernel123_f.f f77 -pipe -Wall -g -O2 -c nb_kernel122_f.f -fPIC -o .libs/nb_kernel122_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel124_f.lo nb_kernel124_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel130_f.lo nb_kernel130_f.f nb_kernel122_f.f:203:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:212:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:221:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:230:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:239:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:248:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:257:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:266:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:275:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:619:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:628:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:637:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:646:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:655:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:664:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:673:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:682:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:691:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:478:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:465:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:474:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:461:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:458:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:476:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:475:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:473:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:464:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:479:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:477:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:471:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:472:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:482:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel131_f.lo nb_kernel131_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel132_f.lo nb_kernel132_f.f f77 -pipe -Wall -g -O2 -c nb_kernel123_f.f -fPIC -o .libs/nb_kernel123_f.o nb_kernel123_f.f:173:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:182:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:191:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:200:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:445:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:454:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:463:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:472:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:337:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:324:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:333:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:320:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:317:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:335:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:334:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:332:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:323:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:338:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:336:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:330:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:331:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:341:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel124_f.f -fPIC -o .libs/nb_kernel124_f.o f77 -pipe -Wall -g -O2 -c nb_kernel130_f.f -fPIC -o .libs/nb_kernel130_f.o nb_kernel124_f.f:219:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:228:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:237:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:246:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:255:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:264:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:273:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:282:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:291:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:300:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:671:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:680:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:689:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:698:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:707:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:716:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:725:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:734:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:743:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:752:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:517:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:504:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:513:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:500:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:497:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:515:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:514:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:512:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:503:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:518:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:516:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:510:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:511:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:521:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:137:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel130_f.f:155:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel130_f.f:325:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel130_f.f:342:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel130_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:247:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:234:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:243:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:230:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:227:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:245:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:244:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:242:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:233:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:248:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:246:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:251:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel132_f.f -fPIC -o .libs/nb_kernel132_f.o f77 -pipe -Wall -g -O2 -c nb_kernel131_f.f -fPIC -o .libs/nb_kernel131_f.o nb_kernel131_f.f:165:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:174:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:183:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:202:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel131_f.f:427:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:436:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:445:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:463:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel131_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:327:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:314:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:323:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:310:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:307:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:325:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:324:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:322:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:313:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:328:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:326:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:331:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:206:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:215:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:224:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:233:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:242:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:251:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:260:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:269:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:278:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:293:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel132_f.f:644:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:653:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:662:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:671:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:680:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:689:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:698:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:707:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:716:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:730:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel132_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel133_f.lo nb_kernel133_f.f nb_kernel132_f.f:503:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:490:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:499:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:486:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:483:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:501:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:500:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:498:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:489:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:504:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:502:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:507:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel134_f.lo nb_kernel134_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel200_f.lo nb_kernel200_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel201_f.lo nb_kernel201_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel202_f.lo nb_kernel202_f.f f77 -pipe -Wall -g -O2 -c nb_kernel133_f.f -fPIC -o .libs/nb_kernel133_f.o nb_kernel133_f.f:177:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:186:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:195:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:204:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:218:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel133_f.f:469:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:478:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:487:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:496:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:510:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel133_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:360:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:347:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:356:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:343:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:340:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:358:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:357:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:355:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:346:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:361:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:359:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:364:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel201_f.f -fPIC -o .libs/nb_kernel201_f.o f77 -pipe -Wall -g -O2 -c nb_kernel200_f.f -fPIC -o .libs/nb_kernel200_f.o f77 -pipe -Wall -g -O2 -c nb_kernel134_f.f -fPIC -o .libs/nb_kernel134_f.o nb_kernel201_f.f:154:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:163:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:172:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:379:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:388:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:397:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:288:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:284:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:271:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:268:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:286:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:285:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:283:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:289:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:287:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:278:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:281:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:277:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:279:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:282:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:280:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:292:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:126:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel200_f.f:275:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel200_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:222:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:231:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:240:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:249:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:258:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:267:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:276:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:285:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:294:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:303:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:314:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel200_f.f:206:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:202:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:189:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:186:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:204:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:203:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:201:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:207:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:205:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel203_f.lo nb_kernel203_f.f nb_kernel200_f.f:196:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:199:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:195:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:197:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:200:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:198:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:210:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:694:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:703:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:712:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:721:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:730:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:739:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:748:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:757:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:766:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:775:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:786:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel134_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:540:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:527:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:536:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:523:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:520:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:538:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:537:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:535:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:526:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:541:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:539:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:544:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel204_f.lo nb_kernel204_f.f f77 -pipe -Wall -g -O2 -c nb_kernel202_f.f -fPIC -o .libs/nb_kernel202_f.o nb_kernel202_f.f:194:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:203:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:212:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:221:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:230:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:239:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:248:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:257:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:266:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:603:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:612:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:621:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:630:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:639:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:648:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:657:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:666:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:675:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:472:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:468:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:455:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:452:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:470:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:469:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:467:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:473:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:471:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:462:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:465:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:461:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:463:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:466:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:464:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:476:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel203_f.f -fPIC -o .libs/nb_kernel203_f.o f77 -pipe -Wall -g -O2 -c nb_kernel204_f.f -fPIC -o .libs/nb_kernel204_f.o nb_kernel203_f.f:154:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:163:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:172:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:379:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:388:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:397:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel210_f.lo nb_kernel210_f.f nb_kernel203_f.f:288:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:284:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:271:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:268:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:286:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:285:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:283:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:289:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:287:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:278:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:281:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:277:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:279:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:282:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:280:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:292:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel211_f.lo nb_kernel211_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel212_f.lo nb_kernel212_f.f nb_kernel204_f.f:194:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:203:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:212:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:221:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:230:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:239:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:248:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:257:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:266:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:603:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:612:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:621:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:630:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:639:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:648:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:657:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:666:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:675:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:472:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:468:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:455:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:452:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:470:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:469:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:467:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:473:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:471:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:462:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:465:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:461:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:463:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:466:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:464:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:476:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel213_f.lo nb_kernel213_f.f f77 -pipe -Wall -g -O2 -c nb_kernel210_f.f -fPIC -o .libs/nb_kernel210_f.o nb_kernel210_f.f:134:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel210_f.f:301:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel210_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel211_f.f -fPIC -o .libs/nb_kernel211_f.o nb_kernel210_f.f:223:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:219:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:206:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:203:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:221:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:220:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:218:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:224:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:222:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:216:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:217:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:227:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel212_f.f -fPIC -o .libs/nb_kernel212_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel214_f.lo nb_kernel214_f.f nb_kernel211_f.f:162:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:171:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:180:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:405:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:414:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:423:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:305:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:301:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:288:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:285:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:303:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:302:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:300:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:306:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:304:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:298:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:299:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:309:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel220_f.lo nb_kernel220_f.f nb_kernel212_f.f:203:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:212:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:221:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:230:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:239:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:248:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:257:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:266:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:275:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:628:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:637:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:646:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:655:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:664:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:673:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:682:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:691:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:700:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:487:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:483:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:470:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:467:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:485:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:484:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:482:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:488:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:486:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:480:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:481:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:491:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel221_f.lo nb_kernel221_f.f f77 -pipe -Wall -g -O2 -c nb_kernel213_f.f -fPIC -o .libs/nb_kernel213_f.o nb_kernel213_f.f:175:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:184:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:193:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:440:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:449:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:458:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel214_f.f -fPIC -o .libs/nb_kernel214_f.o nb_kernel213_f.f:330:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:326:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:313:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:310:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:328:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:327:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:325:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:331:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:329:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:323:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:324:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:334:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel220_f.f -fPIC -o .libs/nb_kernel220_f.o nb_kernel214_f.f:220:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:229:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:238:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:247:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:256:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:265:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:274:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:283:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:292:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:671:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:680:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:689:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:698:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:707:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:716:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:725:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:734:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:743:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:516:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:512:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:499:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:496:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:514:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:513:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:511:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:517:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:515:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:509:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:510:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:520:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:134:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel220_f.f:303:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel220_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:225:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:221:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:208:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:205:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:223:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:222:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:220:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:226:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:224:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:218:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:219:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:229:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel222_f.lo nb_kernel222_f.f f77 -pipe -Wall -g -O2 -c nb_kernel221_f.f -fPIC -o .libs/nb_kernel221_f.o nb_kernel221_f.f:162:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:171:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:180:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:407:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:416:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:425:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:307:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:303:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:290:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:287:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:305:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:304:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:302:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:308:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:306:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:300:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:301:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:311:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel223_f.lo nb_kernel223_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel224_f.lo nb_kernel224_f.f f77 -pipe -Wall -g -O2 -c nb_kernel222_f.f -fPIC -o .libs/nb_kernel222_f.o nb_kernel222_f.f:204:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:213:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:222:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:231:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:240:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:249:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:258:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:267:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:276:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:631:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:640:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:649:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:658:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:667:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:676:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:685:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:694:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:703:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:489:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:485:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:472:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:469:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:487:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:486:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:484:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:490:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:488:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:482:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:483:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:493:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel223_f.f -fPIC -o .libs/nb_kernel223_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel230_f.lo nb_kernel230_f.f f77 -pipe -Wall -g -O2 -c nb_kernel224_f.f -fPIC -o .libs/nb_kernel224_f.o nb_kernel223_f.f:174:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:183:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:192:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:201:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:450:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:459:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:468:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:477:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:341:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:337:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:324:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:321:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:339:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:338:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:336:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:342:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:340:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:334:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:335:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:345:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:220:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:229:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:238:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:247:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:256:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:265:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:274:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:283:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:292:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:301:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:682:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:691:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:700:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:709:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:718:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:727:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:736:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:745:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:754:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:763:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:527:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:523:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:510:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:507:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:525:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:524:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:522:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:528:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:526:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:520:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:521:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:531:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel231_f.lo nb_kernel231_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel232_f.lo nb_kernel232_f.f f77 -pipe -Wall -g -O2 -c nb_kernel230_f.f -fPIC -o .libs/nb_kernel230_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel233_f.lo nb_kernel233_f.f nb_kernel230_f.f:138:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel230_f.f:157:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel230_f.f:328:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel230_f.f:346:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel230_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:249:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:245:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:232:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:229:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:247:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:246:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:244:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:250:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:248:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:253:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel231_f.f -fPIC -o .libs/nb_kernel231_f.o f77 -pipe -Wall -g -O2 -c nb_kernel232_f.f -fPIC -o .libs/nb_kernel232_f.o nb_kernel231_f.f:166:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:175:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:184:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:204:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel234_f.lo nb_kernel234_f.f nb_kernel231_f.f:432:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:441:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:450:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:469:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel231_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:331:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:327:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:314:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:311:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:329:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:328:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:326:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:332:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:330:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:335:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel300_f.lo nb_kernel300_f.f nb_kernel232_f.f:207:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:216:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:225:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:234:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:243:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:252:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:261:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:270:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:279:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:295:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel232_f.f:655:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:664:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:673:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:682:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:691:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:700:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:709:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:718:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:727:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:742:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel232_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:513:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:509:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:496:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:493:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:511:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:510:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:508:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:514:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:512:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:517:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel233_f.f -fPIC -o .libs/nb_kernel233_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel301_f.lo nb_kernel301_f.f nb_kernel233_f.f:178:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:187:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:196:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:205:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:219:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel233_f.f:474:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:483:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:492:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:501:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:515:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel233_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:364:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:360:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:347:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:344:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:362:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:361:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:359:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:365:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:363:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:368:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel300_f.f -fPIC -o .libs/nb_kernel300_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel302_f.lo nb_kernel302_f.f f77 -pipe -Wall -g -O2 -c nb_kernel234_f.f -fPIC -o .libs/nb_kernel234_f.o nb_kernel234_f.f:223:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:232:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:241:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:250:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:259:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:268:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:277:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:286:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:295:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:304:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:315:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel303_f.lo nb_kernel303_f.f nb_kernel234_f.f:705:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:714:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:723:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:732:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:741:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:750:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:759:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:768:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:777:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:786:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:797:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel234_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:550:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:546:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:533:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:530:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:548:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:547:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:545:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:551:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:549:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:554:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:129:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel300_f.f:141:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel300_f.f:292:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel300_f.f:304:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel300_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:221:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:208:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:217:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:204:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:201:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:219:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:218:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:216:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:207:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:222:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:220:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:211:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:210:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:212:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:213:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:225:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel301_f.f -fPIC -o .libs/nb_kernel301_f.o nb_kernel301_f.f:157:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:166:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:175:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:188:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:215:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:241:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:420:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:429:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:438:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:451:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:466:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:480:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:327:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:314:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:323:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:310:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:307:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:325:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:324:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:322:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:313:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:328:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:326:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:317:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:316:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:318:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:319:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:331:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel302_f.f -fPIC -o .libs/nb_kernel302_f.o f77 -pipe -Wall -g -O2 -c nb_kernel303_f.f -fPIC -o .libs/nb_kernel303_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel304_f.lo nb_kernel304_f.f nb_kernel302_f.f:197:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:206:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:215:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:224:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:233:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:242:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:251:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:260:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:269:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:281:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:308:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:335:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:362:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:389:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:416:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:443:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:470:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:497:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:716:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:725:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:734:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:743:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:752:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:761:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:770:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:779:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:788:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:800:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:815:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:830:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:845:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:860:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:875:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:890:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:905:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:920:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:583:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:570:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:579:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:566:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:157:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:563:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:581:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:580:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:578:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:166:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:569:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:584:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:175:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:582:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:573:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:188:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:572:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:574:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:214:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:575:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:587:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:241:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:420:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel303_f.f:429:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel303_f.f:438:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel303_f.f:451:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:465:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:480:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:327:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:314:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:323:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:310:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:307:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:325:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:324:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:322:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:313:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:328:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:326:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:317:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:316:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:318:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:319:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:331:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel310_f.lo nb_kernel310_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel311_f.lo nb_kernel311_f.f f77 -pipe -Wall -g -O2 -c nb_kernel304_f.f -fPIC -o .libs/nb_kernel304_f.o nb_kernel304_f.f:197:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:206:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:215:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:224:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:233:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:242:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:251:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:260:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:269:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:281:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:308:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:335:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:362:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:389:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:416:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:443:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:470:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:497:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:716:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:725:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:734:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:743:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:752:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:761:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:770:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:779:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:788:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:800:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:815:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:830:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:845:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:860:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:875:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:890:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:905:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:920:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:583:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:570:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:579:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:566:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:563:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:581:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:580:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:578:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:569:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:584:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:582:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:573:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:572:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:574:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:575:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:587:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel312_f.lo nb_kernel312_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel313_f.lo nb_kernel313_f.f f77 -pipe -Wall -g -O2 -c nb_kernel310_f.f -fPIC -o .libs/nb_kernel310_f.o nb_kernel310_f.f:138:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel310_f.f:154:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel310_f.f:320:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel310_f.f:336:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel310_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel314_f.lo nb_kernel314_f.f nb_kernel310_f.f:240:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:227:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:236:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:223:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:220:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:238:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:237:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:235:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:226:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:241:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:239:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:244:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel311_f.f -fPIC -o .libs/nb_kernel311_f.o f77 -pipe -Wall -g -O2 -c nb_kernel312_f.f -fPIC -o .libs/nb_kernel312_f.o nb_kernel311_f.f:166:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:175:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:184:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:201:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:233:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:259:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:448:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:457:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:466:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:483:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:502:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:516:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:346:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:333:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:342:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:329:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:326:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:344:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:343:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:341:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:332:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:347:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:345:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:350:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel313_f.f -fPIC -o .libs/nb_kernel313_f.o nb_kernel312_f.f:207:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:216:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:225:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:234:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:243:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:252:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:261:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:270:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:279:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:292:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:324:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:351:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:378:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:405:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:432:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:459:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:486:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:513:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:743:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:752:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:761:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:770:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:779:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:788:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:797:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:806:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:815:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:828:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:847:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:862:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:877:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:892:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:907:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:922:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:937:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:952:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:600:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:587:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:596:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:583:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:580:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:598:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:597:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:595:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:586:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:601:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:599:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:604:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:179:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:188:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:197:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:227:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:253:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:280:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:482:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:491:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:500:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:520:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:534:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:549:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:370:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:357:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:366:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:353:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:350:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:368:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:367:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:365:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:356:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:371:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:369:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:374:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel314_f.f -fPIC -o .libs/nb_kernel314_f.o nb_kernel314_f.f:224:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:233:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:242:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:251:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:260:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:269:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:278:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:287:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:296:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:322:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:349:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:376:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:403:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:430:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:457:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:484:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:511:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:538:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:785:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:794:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:803:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:812:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:821:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:830:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:839:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:848:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:857:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:873:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:888:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:903:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:918:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:933:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:948:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:963:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:978:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:993:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:628:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:615:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:624:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:611:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:608:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:626:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:625:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:623:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:614:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:629:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:627:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:632:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel320_f.lo nb_kernel320_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel321_f.lo nb_kernel321_f.f f77 -pipe -Wall -g -O2 -c nb_kernel320_f.f -fPIC -o .libs/nb_kernel320_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel322_f.lo nb_kernel322_f.f nb_kernel320_f.f:138:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel320_f.f:155:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel320_f.f:322:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel320_f.f:339:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel320_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:242:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:229:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:238:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:225:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:222:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:240:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:239:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:237:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:228:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:243:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:241:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:246:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel323_f.lo nb_kernel323_f.f f77 -pipe -Wall -g -O2 -c nb_kernel321_f.f -fPIC -o .libs/nb_kernel321_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel324_f.lo nb_kernel324_f.f nb_kernel321_f.f:166:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:175:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:184:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:202:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:235:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:261:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:450:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:459:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:468:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:486:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:506:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:520:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:348:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:335:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:344:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:331:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:328:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:346:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:345:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:343:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:334:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:349:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:347:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:352:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel322_f.f -fPIC -o .libs/nb_kernel322_f.o nb_kernel322_f.f:208:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:217:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:226:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:235:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:244:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:253:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:262:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:271:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:280:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:293:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:326:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:353:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:380:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:407:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:434:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:461:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:488:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:515:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:746:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:755:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:764:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:773:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:782:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:791:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:800:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:809:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:818:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:831:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:851:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:866:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:881:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:896:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:911:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:926:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:941:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:956:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:602:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:589:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:598:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:585:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:582:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:600:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:599:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:597:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:588:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:603:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:601:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:606:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel323_f.f -fPIC -o .libs/nb_kernel323_f.o nb_kernel323_f.f:178:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:187:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:196:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:205:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:238:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:264:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:291:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:492:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:501:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:510:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:519:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:542:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:556:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:571:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:381:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:368:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:377:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:364:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:361:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:379:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:378:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:376:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:367:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:382:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:380:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:385:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel330_f.lo nb_kernel330_f.f f77 -pipe -Wall -g -O2 -c nb_kernel324_f.f -fPIC -o .libs/nb_kernel324_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel331_f.lo nb_kernel331_f.f nb_kernel324_f.f:224:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:233:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:242:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:251:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:260:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:269:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:278:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:287:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:296:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:305:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:333:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:360:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:387:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:414:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:441:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:468:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:495:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:522:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:549:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:796:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:805:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:814:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:823:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:832:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:841:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:850:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:859:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:868:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:877:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:895:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel332_f.lo nb_kernel332_f.f nb_kernel324_f.f:910:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:925:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:940:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:955:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:970:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:985:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:1000:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:1015:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:639:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:626:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:635:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:622:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:619:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:637:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:636:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:634:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:625:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:640:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:638:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:643:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel330_f.f -fPIC -o .libs/nb_kernel330_f.o nb_kernel330_f.f:137:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel330_f.f:152:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel330_f.f:332:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel330_f.f:347:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel330_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:254:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:241:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:250:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:237:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:234:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:252:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:251:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:249:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:240:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:255:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:253:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:258:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel331_f.f -fPIC -o .libs/nb_kernel331_f.o nb_kernel331_f.f:165:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:174:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:183:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:199:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:247:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:273:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:460:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:469:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:478:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:494:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:526:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:540:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:360:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:347:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:356:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:343:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:340:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:358:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:357:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:355:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:346:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:361:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:359:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:364:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel332_f.f -fPIC -o .libs/nb_kernel332_f.o nb_kernel332_f.f:206:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:215:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:224:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:233:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:242:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:251:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:260:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:269:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:278:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:290:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:338:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:365:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:392:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:419:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:446:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:473:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:500:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:527:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:755:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:764:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:773:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:782:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:791:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:800:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:809:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:818:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:827:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:839:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:871:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:886:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:901:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:916:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:931:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:946:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:961:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:976:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:614:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:601:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:610:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:597:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:594:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:612:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:611:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:609:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:600:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:615:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:613:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:618:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel333_f.lo nb_kernel333_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel334_f.lo nb_kernel334_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel400_f.lo nb_kernel400_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel410_f.lo nb_kernel410_f.f f77 -pipe -Wall -g -O2 -c nb_kernel333_f.f -fPIC -o .libs/nb_kernel333_f.o nb_kernel333_f.f:177:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:186:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:195:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:204:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:218:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:257:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:283:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:310:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:509:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:518:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:527:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:536:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:550:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:575:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:589:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:604:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:400:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:387:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:396:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:383:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:380:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:398:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:397:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:395:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:386:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:401:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:399:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:404:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel334_f.f -fPIC -o .libs/nb_kernel334_f.o nb_kernel334_f.f:222:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:231:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:240:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:249:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:258:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:267:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:276:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:285:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:294:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:303:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:314:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:352:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:379:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:406:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:433:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:460:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:487:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:514:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:541:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:568:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:812:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:821:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:830:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:839:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:848:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:857:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:866:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:875:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:884:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:893:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:904:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:928:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:943:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:958:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:973:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:988:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1003:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1018:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1033:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1048:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:658:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:645:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:654:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:641:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:638:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:656:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:655:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:653:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:644:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:659:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:657:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:662:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel420_f.lo nb_kernel420_f.f f77 -pipe -Wall -g -O2 -c nb_kernel400_f.f -fPIC -o .libs/nb_kernel400_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel430_f.lo nb_kernel430_f.f f77 -pipe -Wall -g -O2 -c nb_kernel410_f.f -fPIC -o .libs/nb_kernel410_f.o nb_kernel400_f.f:133:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel400_f.f:149:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel400_f.f:306:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel400_f.f:321:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel400_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:233:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:220:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:229:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:216:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:213:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:219:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:234:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:232:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:223:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:226:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:222:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:224:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:227:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:225:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:237:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:142:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel410_f.f:162:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel410_f.f:334:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel410_f.f:353:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel410_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:252:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:239:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:248:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:235:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:232:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:238:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:253:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:251:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:245:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:246:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:256:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel420_f.f -fPIC -o .libs/nb_kernel420_f.o nb_kernel420_f.f:142:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel420_f.f:163:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel420_f.f:336:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel420_f.f:356:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel420_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:254:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:241:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:250:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:237:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:234:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:240:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:255:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:253:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:247:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:248:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:258:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel430_f.f -fPIC -o .libs/nb_kernel430_f.o nb_kernel430_f.f:141:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel430_f.f:160:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:179:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:351:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel430_f.f:369:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:383:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:271:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:258:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:267:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:254:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:251:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:257:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:272:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:270:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:275:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_f77sync.lo ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel_f77sync.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel_f77sync.c -fPIC -DPIC -o .libs/nb_kernel_f77sync.o /bin/sh ../../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnb_kernel.la nb_kernel.lo nb_kernel010_f.lo nb_kernel020_f.lo nb_kernel030_f.lo nb_kernel100_f.lo nb_kernel101_f.lo nb_kernel102_f.lo nb_kernel103_f.lo nb_kernel104_f.lo nb_kernel110_f.lo nb_kernel111_f.lo nb_kernel112_f.lo nb_kernel113_f.lo nb_kernel114_f.lo nb_kernel120_f.lo nb_kernel121_f.lo nb_kernel122_f.lo nb_kernel123_f.lo nb_kernel124_f.lo nb_kernel130_f.lo nb_kernel131_f.lo nb_kernel132_f.lo nb_kernel133_f.lo nb_kernel134_f.lo nb_kernel200_f.lo nb_kernel201_f.lo nb_kernel202_f.lo nb_kernel203_f.lo nb_kernel204_f.lo nb_kernel210_f.lo nb_kernel211_f.lo nb_kernel212_f.lo nb_kernel213_f.lo nb_kernel214_f.lo nb_kernel220_f.lo nb_kernel221_f.lo nb_kernel222_f.lo nb_kernel223_f.lo nb_kernel224_f.lo nb_kernel230_f.lo nb_kernel231_f.lo nb_kernel232_f.lo nb_kernel233_f.lo nb_kernel234_f.lo nb_kernel300_f.lo nb_kernel301_f.lo nb_kernel302_f.lo nb_kernel303_f.lo nb_kernel304_f.lo nb_kernel310_f.lo nb_kernel311_f.lo nb_kernel312_f.lo nb_kernel313_f.lo nb_kernel314_f.lo nb_kernel320_f.lo nb_kernel321_f.lo nb_kernel322_f.lo nb_kernel323_f.lo nb_kernel324_f.lo nb_kernel330_f.lo nb_kernel331_f.lo nb_kernel332_f.lo nb_kernel333_f.lo nb_kernel334_f.lo nb_kernel400_f.lo nb_kernel410_f.lo nb_kernel420_f.lo nb_kernel430_f.lo nb_kernel_f77sync.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libnb_kernel.a .libs/nb_kernel.o .libs/nb_kernel010_f.o .libs/nb_kernel020_f.o .libs/nb_kernel030_f.o .libs/nb_kernel100_f.o .libs/nb_kernel101_f.o .libs/nb_kernel102_f.o .libs/nb_kernel103_f.o .libs/nb_kernel104_f.o .libs/nb_kernel110_f.o .libs/nb_kernel111_f.o .libs/nb_kernel112_f.o .libs/nb_kernel113_f.o .libs/nb_kernel114_f.o .libs/nb_kernel120_f.o .libs/nb_kernel121_f.o .libs/nb_kernel122_f.o .libs/nb_kernel123_f.o .libs/nb_kernel124_f.o .libs/nb_kernel130_f.o .libs/nb_kernel131_f.o .libs/nb_kernel132_f.o .libs/nb_kernel133_f.o .libs/nb_kernel134_f.o .libs/nb_kernel200_f.o .libs/nb_kernel201_f.o .libs/nb_kernel202_f.o .libs/nb_kernel203_f.o .libs/nb_kernel204_f.o .libs/nb_kernel210_f.o .libs/nb_kernel211_f.o .libs/nb_kernel212_f.o .libs/nb_kernel213_f.o .libs/nb_kernel214_f.o .libs/nb_kernel220_f.o .libs/nb_kernel221_f.o .libs/nb_kernel222_f.o .libs/nb_kernel223_f.o .libs/nb_kernel224_f.o .libs/nb_kernel230_f.o .libs/nb_kernel231_f.o .libs/nb_kernel232_f.o .libs/nb_kernel233_f.o .libs/nb_kernel234_f.o .libs/nb_kernel300_f.o .libs/nb_kernel301_f.o .libs/nb_kernel302_f.o .libs/nb_kernel303_f.o .libs/nb_kernel304_f.o .libs/nb_kernel310_f.o .libs/nb_kernel311_f.o .libs/nb_kernel312_f.o .libs/nb_kernel313_f.o .libs/nb_kernel314_f.o .libs/nb_kernel320_f.o .libs/nb_kernel321_f.o .libs/nb_kernel322_f.o .libs/nb_kernel323_f.o .libs/nb_kernel324_f.o .libs/nb_kernel330_f.o .libs/nb_kernel331_f.o .libs/nb_kernel332_f.o .libs/nb_kernel333_f.o .libs/nb_kernel334_f.o .libs/nb_kernel400_f.o .libs/nb_kernel410_f.o .libs/nb_kernel420_f.o .libs/nb_kernel430_f.o .libs/nb_kernel_f77sync.o ranlib .libs/libnb_kernel.a creating libnb_kernel.la (cd .libs && rm -f libnb_kernel.la && ln -s ../libnb_kernel.la libnb_kernel.la) make[6]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nonbonded.lo ../../../../src/gmxlib/nonbonded/nonbonded.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_free_energy.lo ../../../../src/gmxlib/nonbonded/nb_free_energy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_generic.lo ../../../../src/gmxlib/nonbonded/nb_generic.c mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nonbonded.c -fPIC -DPIC -o .libs/nonbonded.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nb_free_energy.c -fPIC -DPIC -o .libs/nb_free_energy.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nb_generic.c -fPIC -DPIC -o .libs/nb_generic.o ../../../../src/gmxlib/nonbonded/nb_generic.c: In function 'gmx_nb_generic_kernel': ../../../../src/gmxlib/nonbonded/nb_generic.c:82:16: warning: unused variable 'shift' [-Wunused-variable] int * shift; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c:62:25: warning: unused variable 'gbtabscale' [-Wunused-variable] real facel,gbtabscale; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c:61:19: warning: unused variable 'nri' [-Wunused-variable] int nri,ntype,table_nelements,icoul,ivdw; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nb_generic.c:43: ../../../../src/gmxlib/nonbonded/nb_generic.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nb_generic.c:43:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../../src/gmxlib/nonbonded/nonbonded.c: In function 'do_nonbonded': ../../../../src/gmxlib/nonbonded/nonbonded.c:283:18: warning: unused variable 'fp' [-Wunused-variable] FILE * fp; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:281:18: warning: unused variable 'bWater' [-Wunused-variable] bool bWater; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:279:43: warning: unused variable 'sz' [-Wunused-variable] int n,n0,n1,i,i0,i1,nrnb_ind,sz; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c: In function 'do_listed_vdw_q': ../../../../src/gmxlib/nonbonded/nonbonded.c:547:15: warning: unused variable 'tmplist' [-Wunused-variable] t_nblist tmplist; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:538:25: warning: unused variable 'i2' [-Wunused-variable] int i0=0,i1=1,i2=2; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nonbonded.c:50: ../../../../src/gmxlib/nonbonded/nonbonded.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nonbonded.c:50:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../../src/gmxlib/nonbonded/nonbonded.c:53:0: ../../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c: In function 'gmx_nb_free_energy_kernel': ../../../../src/gmxlib/nonbonded/nb_free_energy.c:100:25: warning: unused variable 'H' [-Wunused-variable] real Y,F,G,H,Fp,Geps,Heps2,eps,eps2,VV,FF; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:100:23: warning: unused variable 'G' [-Wunused-variable] real Y,F,G,H,Fp,Geps,Heps2,eps,eps2,VV,FF; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:89:19: warning: unused variable 'rinvsix' [-Wunused-variable] real rinvsix; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:86:27: warning: unused variable 'vcoul' [-Wunused-variable] real qqA,qqB,vcoul,vctot,krsq; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nb_free_energy.c:42: ../../../../src/gmxlib/nonbonded/nb_free_energy.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nb_free_energy.c:42:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnonbonded.la nonbonded.lo nb_free_energy.lo nb_generic.lo nb_kernel_x86_64_sse2/libnb_kernel_x86_64_sse2.la nb_kernel/libnb_kernel.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath rm -fr .libs/libnonbonded.lax mkdir .libs/libnonbonded.lax rm -fr .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a mkdir .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a (cd .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a && ar x /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/.libs/libnb_kernel_x86_64_sse2.a) rm -fr .libs/libnonbonded.lax/libnb_kernel.a mkdir .libs/libnonbonded.lax/libnb_kernel.a (cd .libs/libnonbonded.lax/libnb_kernel.a && ar x /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel/.libs/libnb_kernel.a) ar cru .libs/libnonbonded.a .libs/nonbonded.o .libs/nb_free_energy.o .libs/nb_generic.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel_x86_64_sse2_test.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel430_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel410_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel400_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel334_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel333_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel332_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel331_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel330_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel314_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel313_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel312_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel311_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel310_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel304_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel303_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel302_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel301_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel300_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel234_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel233_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel232_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel231_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel230_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel214_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel213_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel212_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel211_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel210_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel204_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel203_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel202_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel201_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel200_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel134_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel133_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel132_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel131_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel130_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel114_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel113_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel112_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel111_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel110_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel104_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel103_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel102_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel101_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel100_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel030_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel010_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel_f77sync.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel430_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel420_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel410_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel400_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel334_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel333_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel332_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel331_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel330_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel324_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel323_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel322_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel321_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel320_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel314_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel313_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel312_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel311_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel310_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel304_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel303_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel302_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel301_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel300_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel234_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel233_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel232_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel231_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel230_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel224_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel223_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel222_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel221_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel220_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel214_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel213_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel212_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel211_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel210_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel204_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel203_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel202_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel201_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel200_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel134_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel133_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel132_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel131_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel130_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel124_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel123_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel122_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel121_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel120_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel114_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel113_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel112_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel111_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel110_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel104_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel103_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel102_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel101_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel100_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel030_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel020_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel010_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel.o ranlib .libs/libnonbonded.a rm -fr .libs/libnonbonded.lax creating libnonbonded.la (cd .libs && rm -f libnonbonded.la && ln -s ../libnonbonded.la libnonbonded.la) make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' Making all in gmx_blas make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_blas' /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dasum.lo ../../../../src/gmxlib/gmx_blas/dasum.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dcopy.lo ../../../../src/gmxlib/gmx_blas/dcopy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgemm.lo ../../../../src/gmxlib/gmx_blas/dgemm.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dger.lo ../../../../src/gmxlib/gmx_blas/dger.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o drot.lo ../../../../src/gmxlib/gmx_blas/drot.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dswap.lo ../../../../src/gmxlib/gmx_blas/dswap.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyr2.lo ../../../../src/gmxlib/gmx_blas/dsyr2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrmm.lo ../../../../src/gmxlib/gmx_blas/dtrmm.c mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/drot.c -fPIC -DPIC -o .libs/drot.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dgemm.c -fPIC -DPIC -o .libs/dgemm.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dasum.c -fPIC -DPIC -o .libs/dasum.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrmm.c -fPIC -DPIC -o .libs/dtrmm.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dcopy.c -fPIC -DPIC -o .libs/dcopy.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrsm.lo ../../../../src/gmxlib/gmx_blas/dtrsm.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsyr2.c -fPIC -DPIC -o .libs/dsyr2.o ../../../../src/gmxlib/gmx_blas/dtrmm.c: In function 'dtrmm_': ../../../../src/gmxlib/gmx_blas/dtrmm.c:32:9: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ ../../../../src/gmxlib/gmx_blas/dtrmm.c:29:20: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, k, info; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dswap.c -fPIC -DPIC -o .libs/dswap.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dger.c -fPIC -DPIC -o .libs/dger.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o daxpy.lo ../../../../src/gmxlib/gmx_blas/daxpy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ddot.lo ../../../../src/gmxlib/gmx_blas/ddot.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgemv.lo ../../../../src/gmxlib/gmx_blas/dgemv.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dnrm2.lo ../../../../src/gmxlib/gmx_blas/dnrm2.c ../../../../src/gmxlib/gmx_blas/dgemm.c: In function 'dgemm_': ../../../../src/gmxlib/gmx_blas/dgemm.c:27:19: warning: variable 'nrowb' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/dgemm.c:27:13: warning: variable 'ncola' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/dgemm.c:27:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrsm.c -fPIC -DPIC -o .libs/dtrsm.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dscal.lo ../../../../src/gmxlib/gmx_blas/dscal.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/daxpy.c -fPIC -DPIC -o .libs/daxpy.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dgemv.c -fPIC -DPIC -o .libs/dgemv.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsymv.lo ../../../../src/gmxlib/gmx_blas/dsymv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dnrm2.c -fPIC -DPIC -o .libs/dnrm2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ddot.c -fPIC -DPIC -o .libs/ddot.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyr2k.lo ../../../../src/gmxlib/gmx_blas/dsyr2k.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrmv.lo ../../../../src/gmxlib/gmx_blas/dtrmv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dscal.c -fPIC -DPIC -o .libs/dscal.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o idamax.lo ../../../../src/gmxlib/gmx_blas/idamax.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sasum.lo ../../../../src/gmxlib/gmx_blas/sasum.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o scopy.lo ../../../../src/gmxlib/gmx_blas/scopy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgemm.lo ../../../../src/gmxlib/gmx_blas/sgemm.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsymv.c -fPIC -DPIC -o .libs/dsymv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsyr2k.c -fPIC -DPIC -o .libs/dsyr2k.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrmv.c -fPIC -DPIC -o .libs/dtrmv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/idamax.c -fPIC -DPIC -o .libs/idamax.o ../../../../src/gmxlib/gmx_blas/dsyr2k.c: In function 'dsyr2k_': ../../../../src/gmxlib/gmx_blas/dsyr2k.c:23:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/scopy.c -fPIC -DPIC -o .libs/scopy.o ../../../../src/gmxlib/gmx_blas/dtrmv.c: In function 'dtrmv_': x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sgemm.c -fPIC -DPIC -o .libs/sgemm.o ../../../../src/gmxlib/gmx_blas/dtrmv.c:18:29: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, ix, jx, kx, info; ^ ../../../../src/gmxlib/gmx_blas/sgemm.c: In function 'sgemm_': ../../../../src/gmxlib/gmx_blas/sgemm.c:26:19: warning: variable 'nrowb' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/sgemm.c:26:13: warning: variable 'ncola' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/sgemm.c:26:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sasum.c -fPIC -DPIC -o .libs/sasum.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sger.lo ../../../../src/gmxlib/gmx_blas/sger.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o srot.lo ../../../../src/gmxlib/gmx_blas/srot.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sswap.lo ../../../../src/gmxlib/gmx_blas/sswap.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyr2.lo ../../../../src/gmxlib/gmx_blas/ssyr2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strmm.lo ../../../../src/gmxlib/gmx_blas/strmm.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/srot.c -fPIC -DPIC -o .libs/srot.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sger.c -fPIC -DPIC -o .libs/sger.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sswap.c -fPIC -DPIC -o .libs/sswap.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strsm.lo ../../../../src/gmxlib/gmx_blas/strsm.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o saxpy.lo ../../../../src/gmxlib/gmx_blas/saxpy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sdot.lo ../../../../src/gmxlib/gmx_blas/sdot.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssyr2.c -fPIC -DPIC -o .libs/ssyr2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strmm.c -fPIC -DPIC -o .libs/strmm.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgemv.lo ../../../../src/gmxlib/gmx_blas/sgemv.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o snrm2.lo ../../../../src/gmxlib/gmx_blas/snrm2.c ../../../../src/gmxlib/gmx_blas/strmm.c: In function 'strmm_': ../../../../src/gmxlib/gmx_blas/strmm.c:31:9: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ ../../../../src/gmxlib/gmx_blas/strmm.c:28:20: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, k, info; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strsm.c -fPIC -DPIC -o .libs/strsm.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sscal.lo ../../../../src/gmxlib/gmx_blas/sscal.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sdot.c -fPIC -DPIC -o .libs/sdot.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sgemv.c -fPIC -DPIC -o .libs/sgemv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/saxpy.c -fPIC -DPIC -o .libs/saxpy.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/snrm2.c -fPIC -DPIC -o .libs/snrm2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssymv.lo ../../../../src/gmxlib/gmx_blas/ssymv.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyr2k.lo ../../../../src/gmxlib/gmx_blas/ssyr2k.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strmv.lo ../../../../src/gmxlib/gmx_blas/strmv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sscal.c -fPIC -DPIC -o .libs/sscal.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o isamax.lo ../../../../src/gmxlib/gmx_blas/isamax.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssyr2k.c -fPIC -DPIC -o .libs/ssyr2k.o ../../../../src/gmxlib/gmx_blas/ssyr2k.c: In function 'ssyr2k_': ../../../../src/gmxlib/gmx_blas/ssyr2k.c:22:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssymv.c -fPIC -DPIC -o .libs/ssymv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strmv.c -fPIC -DPIC -o .libs/strmv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/isamax.c -fPIC -DPIC -o .libs/isamax.o ../../../../src/gmxlib/gmx_blas/strmv.c: In function 'strmv_': ../../../../src/gmxlib/gmx_blas/strmv.c:18:29: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, ix, jx, kx, info; ^ /bin/sh ../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libblas.la dasum.lo dcopy.lo dgemm.lo dger.lo drot.lo dswap.lo dsyr2.lo dtrmm.lo dtrsm.lo daxpy.lo ddot.lo dgemv.lo dnrm2.lo dscal.lo dsymv.lo dsyr2k.lo dtrmv.lo idamax.lo sasum.lo scopy.lo sgemm.lo sger.lo srot.lo sswap.lo ssyr2.lo strmm.lo strsm.lo saxpy.lo sdot.lo sgemv.lo snrm2.lo sscal.lo ssymv.lo ssyr2k.lo strmv.lo isamax.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libblas.a .libs/dasum.o .libs/dcopy.o .libs/dgemm.o .libs/dger.o .libs/drot.o .libs/dswap.o .libs/dsyr2.o .libs/dtrmm.o .libs/dtrsm.o .libs/daxpy.o .libs/ddot.o .libs/dgemv.o .libs/dnrm2.o .libs/dscal.o .libs/dsymv.o .libs/dsyr2k.o .libs/dtrmv.o .libs/idamax.o .libs/sasum.o .libs/scopy.o .libs/sgemm.o .libs/sger.o .libs/srot.o .libs/sswap.o .libs/ssyr2.o .libs/strmm.o .libs/strsm.o .libs/saxpy.o .libs/sdot.o .libs/sgemv.o .libs/snrm2.o .libs/sscal.o .libs/ssymv.o .libs/ssyr2k.o .libs/strmv.o .libs/isamax.o ranlib .libs/libblas.a creating libblas.la (cd .libs && rm -f libblas.la && ln -s ../libblas.la libblas.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_blas' Making all in gmx_lapack make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_lapack' /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dbdsdc.lo ../../../../src/gmxlib/gmx_lapack/dbdsdc.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetf2.lo ../../../../src/gmxlib/gmx_lapack/dgetf2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlamrg.lo ../../../../src/gmxlib/gmx_lapack/dlamrg.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarnv.lo ../../../../src/gmxlib/gmx_lapack/dlarnv.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd0.lo ../../../../src/gmxlib/gmx_lapack/dlasd0.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasda.lo ../../../../src/gmxlib/gmx_lapack/dlasda.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq6.lo ../../../../src/gmxlib/gmx_lapack/dlasq6.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgl2.lo ../../../../src/gmxlib/gmx_lapack/dorgl2.c mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dbdsdc.c -fPIC -DPIC -o .libs/dbdsdc.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgl2.c -fPIC -DPIC -o .libs/dorgl2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetf2.c -fPIC -DPIC -o .libs/dgetf2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlamrg.c -fPIC -DPIC -o .libs/dlamrg.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarnv.c -fPIC -DPIC -o .libs/dlarnv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq6.c -fPIC -DPIC -o .libs/dlasq6.o ../../../../src/gmxlib/gmx_lapack/dgetf2.c: In function 'dgetf2_': ../../../../src/gmxlib/gmx_lapack/dgetf2.c:17:10: warning: variable 'one' set but not used [-Wunused-but-set-variable] double one,minusone; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd0.c -fPIC -DPIC -o .libs/dlasd0.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasda.c -fPIC -DPIC -o .libs/dlasda.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormqr.lo ../../../../src/gmxlib/gmx_lapack/dormqr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dbdsqr.lo ../../../../src/gmxlib/gmx_lapack/dbdsqr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetrf.lo ../../../../src/gmxlib/gmx_lapack/dgetrf.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlange.lo ../../../../src/gmxlib/gmx_lapack/dlange.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd1.lo ../../../../src/gmxlib/gmx_lapack/dlasd1.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormqr.c -fPIC -DPIC -o .libs/dormqr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrtri.lo ../../../../src/gmxlib/gmx_lapack/dtrtri.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasdq.lo ../../../../src/gmxlib/gmx_lapack/dlasdq.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasr.lo ../../../../src/gmxlib/gmx_lapack/dlasr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dbdsqr.c -fPIC -DPIC -o .libs/dbdsqr.o ../../../../src/gmxlib/gmx_lapack/dbdsqr.c: In function 'dbdsqr_': ../../../../src/gmxlib/gmx_lapack/dbdsqr.c:61:12: warning: unused variable 'ftmp' [-Wunused-variable] double ftmp; ^ ../../../../src/gmxlib/gmx_lapack/dbdsqr.c:59:12: warning: variable 'sminlo' set but not used [-Wunused-but-set-variable] double sminlo, tolmul; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorglq.lo ../../../../src/gmxlib/gmx_lapack/dorglq.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd1.c -fPIC -DPIC -o .libs/dlasd1.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetrf.c -fPIC -DPIC -o .libs/dgetrf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlange.c -fPIC -DPIC -o .libs/dlange.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasdq.c -fPIC -DPIC -o .libs/dlasdq.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dtrtri.c -fPIC -DPIC -o .libs/dtrtri.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormtr.lo ../../../../src/gmxlib/gmx_lapack/dormtr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasr.c -fPIC -DPIC -o .libs/dlasr.o ../../../../src/gmxlib/gmx_lapack/dlasr.c: In function 'dlasr_': ../../../../src/gmxlib/gmx_lapack/dlasr.c:21:17: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgebd2.lo ../../../../src/gmxlib/gmx_lapack/dgebd2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlabrd.lo ../../../../src/gmxlib/gmx_lapack/dlabrd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorglq.c -fPIC -DPIC -o .libs/dorglq.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormtr.c -fPIC -DPIC -o .libs/dormtr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlanst.lo ../../../../src/gmxlib/gmx_lapack/dlanst.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgebd2.c -fPIC -DPIC -o .libs/dgebd2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd2.lo ../../../../src/gmxlib/gmx_lapack/dlasd2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasdt.lo ../../../../src/gmxlib/gmx_lapack/dlasdt.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasrt.lo ../../../../src/gmxlib/gmx_lapack/dlasrt.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlabrd.c -fPIC -DPIC -o .libs/dlabrd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlanst.c -fPIC -DPIC -o .libs/dlanst.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgqr.lo ../../../../src/gmxlib/gmx_lapack/dorgqr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ 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-I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaed6.lo ../../../../src/gmxlib/gmx_lapack/dlaed6.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq2.c -fPIC -DPIC -o .libs/dlasq2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaswp.c -fPIC -DPIC -o .libs/dlaswp.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormbr.c -fPIC -DPIC -o .libs/dormbr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsterf.c -fPIC -DPIC -o .libs/dsterf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaed6.c -fPIC -DPIC -o .libs/dlaed6.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgeqr2.c -fPIC -DPIC -o .libs/dgeqr2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o 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-I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarfb.c -fPIC -DPIC -o .libs/dlarfb.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlatrd.lo ../../../../src/gmxlib/gmx_lapack/dlatrd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq3.c -fPIC -DPIC -o .libs/dlasq3.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c 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x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgeqrf.lo ../../../../src/gmxlib/gmx_lapack/dgeqrf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlatrd.c -fPIC -DPIC -o .libs/dlatrd.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlagtf.lo ../../../../src/gmxlib/gmx_lapack/dlagtf.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall 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-Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dstevr.c -fPIC -DPIC -o .libs/dstevr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlagtf.c -fPIC -DPIC -o .libs/dlagtf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarfg.c -fPIC -DPIC -o .libs/dlarfg.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlas2.c -fPIC -DPIC -o .libs/dlas2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd7.c -fPIC -DPIC -o .libs/dlasd7.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormlq.lo ../../../../src/gmxlib/gmx_lapack/dormlq.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsytd2.lo ../../../../src/gmxlib/gmx_lapack/dsytd2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall 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x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarft.lo ../../../../src/gmxlib/gmx_lapack/dlarft.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormlq.c -fPIC -DPIC -o .libs/dormlq.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlascl.lo ../../../../src/gmxlib/gmx_lapack/dlascl.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsytd2.c -fPIC -DPIC -o .libs/dsytd2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd8.lo ../../../../src/gmxlib/gmx_lapack/dlasd8.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlagts.c -fPIC -DPIC -o .libs/dlagts.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgesdd.c -fPIC -DPIC -o .libs/dgesdd.o ../../../../src/gmxlib/gmx_lapack/dgesdd.c: In function 'dgesdd_': ../../../../src/gmxlib/gmx_lapack/dgesdd.c:40:9: warning: variable 'wntqas' set but not used [-Wunused-but-set-variable] int wntqas, lquery; ^ ../../../../src/gmxlib/gmx_lapack/dgesdd.c:38:9: warning: variable 'minwrk' set but not used [-Wunused-but-set-variable] int minwrk, ldwrku, maxwrk, ldwkvt; ^ ../../../../src/gmxlib/gmx_lapack/dgesdd.c:35:16: warning: variable 'wntqo' set but not used [-Wunused-but-set-variable] int wntqn, wntqo, wntqs; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq5.lo ../../../../src/gmxlib/gmx_lapack/dlasq5.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarft.c -fPIC -DPIC -o .libs/dlarft.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgbr.lo ../../../../src/gmxlib/gmx_lapack/dorgbr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd8.c -fPIC -DPIC -o .libs/dlasd8.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlascl.c -fPIC -DPIC -o .libs/dlascl.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormql.lo ../../../../src/gmxlib/gmx_lapack/dormql.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaev2.lo ../../../../src/gmxlib/gmx_lapack/dlaev2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsteqr.lo ../../../../src/gmxlib/gmx_lapack/dsteqr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyevr.lo ../../../../src/gmxlib/gmx_lapack/dsyevr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgbr.c -fPIC -DPIC -o .libs/dorgbr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq5.c -fPIC -DPIC -o .libs/dlasq5.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormql.c -fPIC -DPIC -o .libs/dormql.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasrt2.lo ../../../../src/gmxlib/gmx_lapack/dlasrt2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlansy.lo ../../../../src/gmxlib/gmx_lapack/dlansy.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsteqr.c -fPIC -DPIC -o .libs/dsteqr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlar1vx.lo ../../../../src/gmxlib/gmx_lapack/dlar1vx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsyevr.c -fPIC -DPIC -o .libs/dsyevr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaev2.c -fPIC -DPIC -o .libs/dlaev2.o ../../../../src/gmxlib/gmx_lapack/dsyevr.c: In function 'dsyevr_': ../../../../src/gmxlib/gmx_lapack/dsyevr.c:36:12: warning: variable 'abstll' set but not used [-Wunused-but-set-variable] double abstll, bignum; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:33:17: warning: variable 'ieeeok' set but not used [-Wunused-but-set-variable] int iscale, ieeeok, indibl, indifl; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:21:22: warning: variable 'vuu' set but not used [-Wunused-but-set-variable] double eps, vll, vuu, tmp1; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:21:17: warning: variable 'vll' set but not used [-Wunused-but-set-variable] double eps, vll, vuu, tmp1; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasrt2.c -fPIC -DPIC -o .libs/dlasrt2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlansy.c -fPIC -DPIC -o .libs/dlansy.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrbx.lo ../../../../src/gmxlib/gmx_lapack/dlarrbx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlar1vx.c -fPIC -DPIC -o .libs/dlar1vx.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrex.lo ../../../../src/gmxlib/gmx_lapack/dlarrex.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrbx.c -fPIC -DPIC -o .libs/dlarrbx.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrfx.lo ../../../../src/gmxlib/gmx_lapack/dlarrfx.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrvx.lo ../../../../src/gmxlib/gmx_lapack/dlarrvx.c ../../../../src/gmxlib/gmx_lapack/dlarrbx.c: In function 'dlarrbx_': ../../../../src/gmxlib/gmx_lapack/dlarrbx.c:36:33: warning: variable 'error' set but not used [-Wunused-but-set-variable] double right, width, dplus, error; ^ ../../../../src/gmxlib/gmx_lapack/dlarrbx.c:34:12: warning: variable 'eps' set but not used [-Wunused-but-set-variable] double eps, tmp, left; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sbdsdc.lo ../../../../src/gmxlib/gmx_lapack/sbdsdc.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrex.c -fPIC -DPIC -o .libs/dlarrex.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetf2.lo ../../../../src/gmxlib/gmx_lapack/sgetf2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slamrg.lo ../../../../src/gmxlib/gmx_lapack/slamrg.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarnv.lo ../../../../src/gmxlib/gmx_lapack/slarnv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrvx.c -fPIC -DPIC -o .libs/dlarrvx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrfx.c -fPIC -DPIC -o .libs/dlarrfx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sbdsdc.c -fPIC -DPIC -o .libs/sbdsdc.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd0.lo ../../../../src/gmxlib/gmx_lapack/slasd0.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetf2.c -fPIC -DPIC -o .libs/sgetf2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slamrg.c -fPIC -DPIC -o .libs/slamrg.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasda.lo ../../../../src/gmxlib/gmx_lapack/slasda.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarnv.c -fPIC -DPIC -o .libs/slarnv.o ../../../../src/gmxlib/gmx_lapack/sgetf2.c: In function 'sgetf2_': ../../../../src/gmxlib/gmx_lapack/sgetf2.c:17:9: warning: variable 'one' set but not used [-Wunused-but-set-variable] float one,minusone; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd0.c -fPIC -DPIC -o .libs/slasd0.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq6.lo ../../../../src/gmxlib/gmx_lapack/slasq6.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgl2.lo ../../../../src/gmxlib/gmx_lapack/sorgl2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormqr.lo ../../../../src/gmxlib/gmx_lapack/sormqr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasda.c -fPIC -DPIC -o .libs/slasda.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq6.c -fPIC -DPIC -o .libs/slasq6.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgl2.c -fPIC -DPIC -o .libs/sorgl2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormqr.c -fPIC -DPIC -o .libs/sormqr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sbdsqr.lo ../../../../src/gmxlib/gmx_lapack/sbdsqr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetrf.lo ../../../../src/gmxlib/gmx_lapack/sgetrf.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slange.lo ../../../../src/gmxlib/gmx_lapack/slange.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd1.lo ../../../../src/gmxlib/gmx_lapack/slasd1.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sbdsqr.c -fPIC -DPIC -o .libs/sbdsqr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssytrd.lo ../../../../src/gmxlib/gmx_lapack/ssytrd.c ../../../../src/gmxlib/gmx_lapack/sbdsqr.c: In function 'sbdsqr_': ../../../../src/gmxlib/gmx_lapack/sbdsqr.c:61:11: warning: unused variable 'ftmp' [-Wunused-variable] float ftmp; ^ ../../../../src/gmxlib/gmx_lapack/sbdsqr.c:59:11: warning: variable 'sminlo' set but not used [-Wunused-but-set-variable] float sminlo, tolmul; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd1.c -fPIC -DPIC -o .libs/slasd1.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasdq.lo ../../../../src/gmxlib/gmx_lapack/slasdq.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasr.lo ../../../../src/gmxlib/gmx_lapack/slasr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorglq.lo ../../../../src/gmxlib/gmx_lapack/sorglq.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetrf.c -fPIC -DPIC -o .libs/sgetrf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slange.c -fPIC -DPIC -o .libs/slange.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormtr.lo ../../../../src/gmxlib/gmx_lapack/sormtr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgebd2.lo ../../../../src/gmxlib/gmx_lapack/sgebd2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssytrd.c -fPIC -DPIC -o .libs/ssytrd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasdq.c -fPIC -DPIC -o .libs/slasdq.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasr.c -fPIC -DPIC -o .libs/slasr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorglq.c -fPIC -DPIC -o .libs/sorglq.o ../../../../src/gmxlib/gmx_lapack/slasr.c: In function 'slasr_': ../../../../src/gmxlib/gmx_lapack/slasr.c:21:17: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slabrd.lo 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-I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstebz.lo ../../../../src/gmxlib/gmx_lapack/sstebz.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgebrd.lo ../../../../src/gmxlib/gmx_lapack/sgebrd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasrt.c -fPIC -DPIC -o .libs/slasrt.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasdt.c -fPIC -DPIC -o .libs/slasdt.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetrs.lo ../../../../src/gmxlib/gmx_lapack/sgetrs.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slacpy.lo ../../../../src/gmxlib/gmx_lapack/slacpy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slapy2.lo ../../../../src/gmxlib/gmx_lapack/slapy2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src 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x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetrs.c -fPIC -DPIC -o .libs/sgetrs.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slacpy.c -fPIC -DPIC -o .libs/slacpy.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaset.lo ../../../../src/gmxlib/gmx_lapack/slaset.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ 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../../../../src/gmxlib/gmx_lapack/sorm2r.c: In function 'sorm2r_': ../../../../src/gmxlib/gmx_lapack/sorm2r.c:19:42: warning: variable 'nq' set but not used [-Wunused-but-set-variable] int i__, i1, i2, i3, ic, jc, mi, ni, nq; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstein.c -fPIC -DPIC -o .libs/sstein.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgelqf.c -fPIC -DPIC -o .libs/sgelqf.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd5.lo ../../../../src/gmxlib/gmx_lapack/slasd5.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq2.lo ../../../../src/gmxlib/gmx_lapack/slasq2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaebz.c -fPIC -DPIC -o .libs/slaebz.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarf.c -fPIC -DPIC -o .libs/slarf.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaswp.lo ../../../../src/gmxlib/gmx_lapack/slaswp.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slartg.c -fPIC -DPIC -o .libs/slartg.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormbr.lo ../../../../src/gmxlib/gmx_lapack/sormbr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c 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-I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgeqr2.lo ../../../../src/gmxlib/gmx_lapack/sgeqr2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormbr.c -fPIC -DPIC -o .libs/sormbr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaed6.lo ../../../../src/gmxlib/gmx_lapack/slaed6.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarfb.lo ../../../../src/gmxlib/gmx_lapack/slarfb.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaruv.lo ../../../../src/gmxlib/gmx_lapack/slaruv.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd6.lo ../../../../src/gmxlib/gmx_lapack/slasd6.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssterf.c -fPIC -DPIC -o .libs/ssterf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgeqr2.c -fPIC -DPIC -o .libs/sgeqr2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarfb.c -fPIC -DPIC -o .libs/slarfb.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaed6.c -fPIC -DPIC -o .libs/slaed6.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq3.lo ../../../../src/gmxlib/gmx_lapack/slasq3.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaruv.c -fPIC -DPIC -o .libs/slaruv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd6.c -fPIC -DPIC -o .libs/slasd6.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slatrd.lo ../../../../src/gmxlib/gmx_lapack/slatrd.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorml2.lo ../../../../src/gmxlib/gmx_lapack/sorml2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstevr.lo ../../../../src/gmxlib/gmx_lapack/sstevr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq3.c -fPIC -DPIC -o .libs/slasq3.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgeqrf.lo ../../../../src/gmxlib/gmx_lapack/sgeqrf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slatrd.c -fPIC -DPIC -o .libs/slatrd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorml2.c -fPIC -DPIC -o .libs/sorml2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstevr.c -fPIC -DPIC -o .libs/sstevr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgeqrf.c -fPIC -DPIC -o .libs/sgeqrf.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slagtf.lo ../../../../src/gmxlib/gmx_lapack/slagtf.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarfg.lo ../../../../src/gmxlib/gmx_lapack/slarfg.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slas2.lo 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x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormlq.lo ../../../../src/gmxlib/gmx_lapack/sormlq.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssytd2.lo ../../../../src/gmxlib/gmx_lapack/ssytd2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slagtf.c -fPIC -DPIC -o .libs/slagtf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slas2.c -fPIC -DPIC -o .libs/slas2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarfg.c -fPIC -DPIC -o .libs/slarfg.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd7.c -fPIC -DPIC -o .libs/slasd7.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorg2r.c -fPIC -DPIC -o .libs/sorg2r.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq4.c -fPIC -DPIC -o .libs/slasq4.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgesdd.lo ../../../../src/gmxlib/gmx_lapack/sgesdd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormlq.c -fPIC -DPIC -o .libs/sormlq.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slagts.lo ../../../../src/gmxlib/gmx_lapack/slagts.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssytd2.c -fPIC -DPIC -o .libs/ssytd2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarft.lo ../../../../src/gmxlib/gmx_lapack/slarft.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slascl.lo ../../../../src/gmxlib/gmx_lapack/slascl.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgesdd.c -fPIC -DPIC -o .libs/sgesdd.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd8.lo ../../../../src/gmxlib/gmx_lapack/slasd8.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq5.lo ../../../../src/gmxlib/gmx_lapack/slasq5.c ../../../../src/gmxlib/gmx_lapack/sgesdd.c: In function 'sgesdd_': ../../../../src/gmxlib/gmx_lapack/sgesdd.c:40:9: warning: variable 'wntqas' set but not used [-Wunused-but-set-variable] int wntqas, lquery; ^ ../../../../src/gmxlib/gmx_lapack/sgesdd.c:38:9: warning: variable 'minwrk' set but not used [-Wunused-but-set-variable] int minwrk, ldwrku, maxwrk, ldwkvt; ^ ../../../../src/gmxlib/gmx_lapack/sgesdd.c:35:16: warning: variable 'wntqo' set but not used [-Wunused-but-set-variable] int wntqn, wntqo, wntqs; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slagts.c -fPIC -DPIC -o .libs/slagts.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgbr.lo ../../../../src/gmxlib/gmx_lapack/sorgbr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormql.lo ../../../../src/gmxlib/gmx_lapack/sormql.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slascl.c -fPIC -DPIC -o .libs/slascl.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarft.c -fPIC -DPIC -o .libs/slarft.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd8.c -fPIC -DPIC -o .libs/slasd8.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq5.c -fPIC -DPIC -o .libs/slasq5.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormql.c -fPIC -DPIC -o .libs/sormql.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaev2.lo ../../../../src/gmxlib/gmx_lapack/slaev2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssteqr.lo ../../../../src/gmxlib/gmx_lapack/ssteqr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgbr.c -fPIC -DPIC -o .libs/sorgbr.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyevr.lo ../../../../src/gmxlib/gmx_lapack/ssyevr.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasrt2.lo ../../../../src/gmxlib/gmx_lapack/slasrt2.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slansy.lo ../../../../src/gmxlib/gmx_lapack/slansy.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slar1vx.lo ../../../../src/gmxlib/gmx_lapack/slar1vx.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrbx.lo ../../../../src/gmxlib/gmx_lapack/slarrbx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaev2.c -fPIC -DPIC -o .libs/slaev2.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrex.lo ../../../../src/gmxlib/gmx_lapack/slarrex.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssteqr.c -fPIC -DPIC -o .libs/ssteqr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssyevr.c -fPIC -DPIC -o .libs/ssyevr.o ../../../../src/gmxlib/gmx_lapack/ssyevr.c: In function 'ssyevr_': ../../../../src/gmxlib/gmx_lapack/ssyevr.c:36:11: warning: variable 'abstll' set but not used [-Wunused-but-set-variable] float abstll, bignum; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:33:17: warning: variable 'ieeeok' set but not used [-Wunused-but-set-variable] int iscale, ieeeok, indibl, indifl; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:21:21: warning: variable 'vuu' set but not used [-Wunused-but-set-variable] float eps, vll, vuu, tmp1; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:21:16: warning: variable 'vll' set but not used [-Wunused-but-set-variable] float eps, vll, vuu, tmp1; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasrt2.c -fPIC -DPIC -o .libs/slasrt2.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slansy.c -fPIC -DPIC -o .libs/slansy.o /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrfx.lo ../../../../src/gmxlib/gmx_lapack/slarrfx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slar1vx.c -fPIC -DPIC -o .libs/slar1vx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrbx.c -fPIC -DPIC -o .libs/slarrbx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrex.c -fPIC -DPIC -o .libs/slarrex.o ../../../../src/gmxlib/gmx_lapack/slarrbx.c: In function 'slarrbx_': ../../../../src/gmxlib/gmx_lapack/slarrbx.c:36:32: warning: variable 'error' set but not used [-Wunused-but-set-variable] float right, width, dplus, error; ^ ../../../../src/gmxlib/gmx_lapack/slarrbx.c:34:11: warning: variable 'eps' set but not used [-Wunused-but-set-variable] float eps, tmp, left; ^ /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrvx.lo ../../../../src/gmxlib/gmx_lapack/slarrvx.c /bin/sh ../../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ilasrt2.lo ../../../../src/gmxlib/gmx_lapack/ilasrt2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrfx.c -fPIC -DPIC -o .libs/slarrfx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrvx.c -fPIC -DPIC -o .libs/slarrvx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ilasrt2.c -fPIC -DPIC -o .libs/ilasrt2.o /bin/sh ../../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o liblapack.la dbdsdc.lo dgetf2.lo dlamrg.lo dlarnv.lo dlasd0.lo dlasda.lo dlasq6.lo dorgl2.lo dormqr.lo dbdsqr.lo dgetrf.lo dlange.lo dlasd1.lo dtrtri.lo dlasdq.lo dlasr.lo dorglq.lo dormtr.lo dgebd2.lo dlabrd.lo dlanst.lo dlasd2.lo dlasdt.lo dlasrt.lo dorgqr.lo dstebz.lo dgebrd.lo dsytrd.lo dlacpy.lo dlapy2.lo dlasd3.lo dlaset.lo dlassq.lo dorm2l.lo dgetrs.lo dstegr.lo dgelq2.lo dlae2.lo dlasd4.lo dlasq1.lo dtrti2.lo dgetri.lo dlasv2.lo dorm2r.lo dstein.lo dgelqf.lo dlaebz.lo dlarf.lo dlartg.lo dlasd5.lo dlasq2.lo dlaswp.lo dormbr.lo dsterf.lo dgeqr2.lo dlaed6.lo dlarfb.lo dlaruv.lo dlasd6.lo dlasq3.lo dlatrd.lo dorml2.lo dstevr.lo dgeqrf.lo dlagtf.lo dlarfg.lo dlas2.lo dlasd7.lo dlasq4.lo dorg2r.lo dormlq.lo dsytd2.lo dgesdd.lo dlagts.lo dlarft.lo dlascl.lo dlasd8.lo dlasq5.lo dorgbr.lo dormql.lo dlaev2.lo dsteqr.lo dsyevr.lo dlasrt2.lo dlansy.lo dlar1vx.lo dlarrbx.lo dlarrex.lo dlarrfx.lo dlarrvx.lo sbdsdc.lo sgetf2.lo slamrg.lo slarnv.lo slasd0.lo slasda.lo slasq6.lo sorgl2.lo sormqr.lo sbdsqr.lo sgetrf.lo slange.lo slasd1.lo ssytrd.lo slasdq.lo slasr.lo sorglq.lo sormtr.lo sgebd2.lo slabrd.lo slanst.lo slasd2.lo slasdt.lo slasrt.lo sorgqr.lo sstebz.lo sgebrd.lo sgetrs.lo slacpy.lo slapy2.lo slasd3.lo slaset.lo slassq.lo sorm2l.lo sgetri.lo sstegr.lo sgelq2.lo slae2.lo slasd4.lo slasq1.lo strti2.lo strtri.lo slasv2.lo sorm2r.lo sstein.lo sgelqf.lo slaebz.lo slarf.lo slartg.lo slasd5.lo slasq2.lo slaswp.lo sormbr.lo ssterf.lo sgeqr2.lo slaed6.lo slarfb.lo slaruv.lo slasd6.lo slasq3.lo slatrd.lo sorml2.lo sstevr.lo sgeqrf.lo slagtf.lo slarfg.lo slas2.lo slasd7.lo slasq4.lo sorg2r.lo sormlq.lo ssytd2.lo sgesdd.lo slagts.lo slarft.lo slascl.lo slasd8.lo slasq5.lo sorgbr.lo sormql.lo slaev2.lo ssteqr.lo ssyevr.lo slasrt2.lo slansy.lo slar1vx.lo slarrbx.lo slarrex.lo slarrfx.lo slarrvx.lo ilasrt2.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/liblapack.a .libs/dbdsdc.o .libs/dgetf2.o .libs/dlamrg.o .libs/dlarnv.o .libs/dlasd0.o .libs/dlasda.o .libs/dlasq6.o .libs/dorgl2.o .libs/dormqr.o .libs/dbdsqr.o .libs/dgetrf.o .libs/dlange.o .libs/dlasd1.o .libs/dtrtri.o .libs/dlasdq.o .libs/dlasr.o .libs/dorglq.o .libs/dormtr.o .libs/dgebd2.o .libs/dlabrd.o .libs/dlanst.o .libs/dlasd2.o .libs/dlasdt.o .libs/dlasrt.o .libs/dorgqr.o .libs/dstebz.o .libs/dgebrd.o .libs/dsytrd.o .libs/dlacpy.o .libs/dlapy2.o .libs/dlasd3.o .libs/dlaset.o .libs/dlassq.o .libs/dorm2l.o .libs/dgetrs.o .libs/dstegr.o .libs/dgelq2.o .libs/dlae2.o .libs/dlasd4.o .libs/dlasq1.o .libs/dtrti2.o .libs/dgetri.o .libs/dlasv2.o .libs/dorm2r.o .libs/dstein.o .libs/dgelqf.o .libs/dlaebz.o .libs/dlarf.o .libs/dlartg.o .libs/dlasd5.o .libs/dlasq2.o .libs/dlaswp.o .libs/dormbr.o .libs/dsterf.o .libs/dgeqr2.o .libs/dlaed6.o .libs/dlarfb.o .libs/dlaruv.o .libs/dlasd6.o .libs/dlasq3.o .libs/dlatrd.o .libs/dorml2.o .libs/dstevr.o .libs/dgeqrf.o .libs/dlagtf.o .libs/dlarfg.o .libs/dlas2.o .libs/dlasd7.o .libs/dlasq4.o .libs/dorg2r.o .libs/dormlq.o .libs/dsytd2.o .libs/dgesdd.o .libs/dlagts.o .libs/dlarft.o .libs/dlascl.o .libs/dlasd8.o .libs/dlasq5.o .libs/dorgbr.o .libs/dormql.o .libs/dlaev2.o .libs/dsteqr.o .libs/dsyevr.o .libs/dlasrt2.o .libs/dlansy.o .libs/dlar1vx.o .libs/dlarrbx.o .libs/dlarrex.o .libs/dlarrfx.o .libs/dlarrvx.o .libs/sbdsdc.o .libs/sgetf2.o .libs/slamrg.o .libs/slarnv.o .libs/slasd0.o .libs/slasda.o .libs/slasq6.o .libs/sorgl2.o .libs/sormqr.o .libs/sbdsqr.o .libs/sgetrf.o .libs/slange.o .libs/slasd1.o .libs/ssytrd.o .libs/slasdq.o .libs/slasr.o .libs/sorglq.o .libs/sormtr.o .libs/sgebd2.o .libs/slabrd.o .libs/slanst.o .libs/slasd2.o .libs/slasdt.o .libs/slasrt.o .libs/sorgqr.o .libs/sstebz.o .libs/sgebrd.o .libs/sgetrs.o .libs/slacpy.o .libs/slapy2.o .libs/slasd3.o .libs/slaset.o .libs/slassq.o .libs/sorm2l.o .libs/sgetri.o .libs/sstegr.o .libs/sgelq2.o .libs/slae2.o .libs/slasd4.o .libs/slasq1.o .libs/strti2.o .libs/strtri.o .libs/slasv2.o .libs/sorm2r.o .libs/sstein.o .libs/sgelqf.o .libs/slaebz.o .libs/slarf.o .libs/slartg.o .libs/slasd5.o .libs/slasq2.o .libs/slaswp.o .libs/sormbr.o .libs/ssterf.o .libs/sgeqr2.o .libs/slaed6.o .libs/slarfb.o .libs/slaruv.o .libs/slasd6.o .libs/slasq3.o .libs/slatrd.o .libs/sorml2.o .libs/sstevr.o .libs/sgeqrf.o .libs/slagtf.o .libs/slarfg.o .libs/slas2.o .libs/slasd7.o .libs/slasq4.o .libs/sorg2r.o .libs/sormlq.o .libs/ssytd2.o .libs/sgesdd.o .libs/slagts.o .libs/slarft.o .libs/slascl.o .libs/slasd8.o .libs/slasq5.o .libs/sorgbr.o .libs/sormql.o .libs/slaev2.o .libs/ssteqr.o .libs/ssyevr.o .libs/slasrt2.o .libs/slansy.o .libs/slar1vx.o .libs/slarrbx.o .libs/slarrex.o .libs/slarrfx.o .libs/slarrvx.o .libs/ilasrt2.o ranlib .libs/liblapack.a creating liblapack.la (cd .libs && rm -f liblapack.la && ln -s ../liblapack.la liblapack.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_lapack' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o 3dview.lo ../../../src/gmxlib/3dview.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o atomprop.lo ../../../src/gmxlib/atomprop.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o bondfree.lo ../../../src/gmxlib/bondfree.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcgrid.lo ../../../src/gmxlib/calcgrid.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calch.lo ../../../src/gmxlib/calch.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o checkpoint.lo ../../../src/gmxlib/checkpoint.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o confio.lo ../../../src/gmxlib/confio.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o copyrite.lo ../../../src/gmxlib/copyrite.c mkdir .libs mkdir .libs mkdir: cannot create directory '.libs': File exists x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/3dview.c -fPIC -DPIC -o .libs/3dview.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/calcgrid.c -fPIC -DPIC -o .libs/calcgrid.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/checkpoint.c -fPIC -DPIC -o .libs/checkpoint.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/atomprop.c -fPIC -DPIC -o .libs/atomprop.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/bondfree.c -fPIC -DPIC -o .libs/bondfree.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/calch.c -fPIC -DPIC -o .libs/calch.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/confio.c -fPIC -DPIC -o .libs/confio.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/copyrite.c -fPIC -DPIC -o .libs/copyrite.o ../../../src/gmxlib/calcgrid.c: In function 'calc_grid': ../../../src/gmxlib/calcgrid.c:89:8: warning: unused variable 'tmp' [-Wunused-variable] real tmp[3]; ^ ../../../src/gmxlib/calcgrid.c:86:10: warning: unused variable 'j' [-Wunused-variable] int i,j,nmin[DIM]; ^ In file included from ../../../src/gmxlib/atomprop.c:45:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/atomprop.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/calch.c: In function 'gen_waterhydrogen': ../../../src/gmxlib/calch.c:81:14: warning: unused variable 'kkk' [-Wunused-variable] rvec kkk; ^ In file included from ../../../src/gmxlib/calch.c:42:0: ../../../src/gmxlib/calch.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/calch.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o disre.lo ../../../src/gmxlib/disre.c ../../../src/gmxlib/confio.c: In function 'read_espresso_conf': ../../../src/gmxlib/confio.c:448:21: warning: unused variable 'npar' [-Wunused-variable] int natoms,level,npar,r,nprop,p,i,m; ^ ../../../src/gmxlib/confio.c:448:8: warning: unused variable 'natoms' [-Wunused-variable] int natoms,level,npar,r,nprop,p,i,m; ^ ../../../src/gmxlib/confio.c: In function 'read_stx_conf': ../../../src/gmxlib/confio.c:1298:14: warning: unused variable 'd' [-Wunused-variable] real d,r1,r2; ^ ../../../src/gmxlib/confio.c:1293:14: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/confio.c:49: ../../../src/gmxlib/confio.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/confio.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/confio.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/gmxlib/confio.c:57:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/confio.c:59: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/confio.c:864:13: warning: 'get_conf' defined but not used [-Wunused-function] static void get_conf(FILE *in, char *title, int *natoms, ^ ../../../src/gmxlib/3dview.c: In function 'reset_view': ../../../src/gmxlib/3dview.c:282:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpte_ints': ../../../src/gmxlib/checkpoint.c:305:16: warning: unused variable 'i' [-Wunused-variable] int nf,dt,i; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpte_doubles': ../../../src/gmxlib/checkpoint.c:371:16: warning: unused variable 'i' [-Wunused-variable] int nf,dt,i; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpt_header': ../../../src/gmxlib/checkpoint.c:534:10: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/3dview.c:47: ../../../src/gmxlib/3dview.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/3dview.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/checkpoint.c: In function 'write_checkpoint': ../../../src/gmxlib/checkpoint.c:837:30: warning: unused variable 'i' [-Wunused-variable] int flags_eks,flags_enh,i; ^ ../../../src/gmxlib/checkpoint.c:833:29: warning: unused variable 'flag_64bit' [-Wunused-variable] int nppnodes,npmenodes,flag_64bit; ^ ../../../src/gmxlib/checkpoint.c: In function 'read_checkpoint': ../../../src/gmxlib/checkpoint.c:1254:40: warning: left-hand operand of comma expression has no effect [-Wunused-value] if (outputfiles[i].filename,outputfiles[i].offset < 0) ^ ../../../src/gmxlib/checkpoint.c:1036:7: warning: unused variable 'filename' [-Wunused-variable] char filename[STRLEN]; ^ ../../../src/gmxlib/checkpoint.c:1033:15: warning: unused variable 'j' [-Wunused-variable] int fp,i,j; ^ ../../../src/gmxlib/checkpoint.c: In function 'list_checkpoint': ../../../src/gmxlib/checkpoint.c:1421:12: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/checkpoint.c:1421:10: warning: unused variable 'i' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/checkpoint.c:1420:10: warning: unused variable 'indent' [-Wunused-variable] int indent; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/disre.c -fPIC -DPIC -o .libs/disre.o ../../../src/gmxlib/copyrite.c: In function 'cool_quote': ../../../src/gmxlib/copyrite.c:181:9: warning: unused variable 's' [-Wunused-variable] char *s,*ptr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/checkpoint.c:32: ../../../src/gmxlib/checkpoint.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/checkpoint.c:34: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/checkpoint.c:34:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/copyrite.c: In function 'please_cite': ../../../src/gmxlib/copyrite.c:469:8: warning: unused variable 'j' [-Wunused-variable] int j,index; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/copyrite.c:53: ../../../src/gmxlib/copyrite.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/disre.c: In function 'init_disres': ../../../src/gmxlib/disre.c:62:19: warning: variable 'ip' set but not used [-Wunused-but-set-variable] t_iparams *ip; ^ ../../../src/gmxlib/disre.c:61:26: warning: unused variable 'i' [-Wunused-variable] int fa,nmol,i,npair,np; ^ ../../../src/gmxlib/disre.c: In function 'calc_disres_R_6': ../../../src/gmxlib/disre.c:217:23: warning: unused variable 'dt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:217:20: warning: unused variable 'jt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:217:17: warning: unused variable 'it' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:212:37: warning: unused variable 'm' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:34: warning: unused variable 'kj' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:31: warning: unused variable 'ki' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:24: warning: unused variable 'i' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c: In function 'ta_disres': ../../../src/gmxlib/disre.c:338:20: warning: unused variable 'jt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:338:17: warning: unused variable 'it' [-Wunused-variable] ivec it,jt,dt; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/disre.c:47: ../../../src/gmxlib/disre.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/disre.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/disre.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/bondfree.c: In function 'FENE_bonds': ../../../src/gmxlib/bondfree.c:220:9: warning: unused variable 'dr' [-Wunused-variable] real dr,dr2,bm2,omdr2obm2,fbond,vbond,fij,vtot; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_fit.lo ../../../src/gmxlib/do_fit.c ../../../src/gmxlib/bondfree.c: In function 'do_1_thole': ../../../src/gmxlib/bondfree.c:534:20: warning: unused variable 'r12n' [-Wunused-variable] real r12sq,r12_1,r12n,r12bar,v0,v1,fscal,ebar,fff; ^ ../../../src/gmxlib/bondfree.c: In function 'posres': ../../../src/gmxlib/bondfree.c:1136:19: warning: unused variable 'fc' [-Wunused-variable] real v,vtot,fm,*fc; ^ ../../../src/gmxlib/bondfree.c:1134:22: warning: unused variable 'ki' [-Wunused-variable] int i,ai,m,d,type,ki,npbcdim=0; ^ ../../../src/gmxlib/bondfree.c: In function 'cross_bond_angle': ../../../src/gmxlib/bondfree.c:1687:32: warning: variable 't3' set but not used [-Wunused-but-set-variable] int i,ai,aj,ak,type,m,t1,t2,t3; ^ ../../../src/gmxlib/bondfree.c: In function 'bonded_tab': ../../../src/gmxlib/bondfree.c:1762:10: warning: unused variable 'f' [-Wunused-variable] real v,f,dvdl; ^ ../../../src/gmxlib/bondfree.c:1762:8: warning: unused variable 'v' [-Wunused-variable] real v,f,dvdl; ^ ../../../src/gmxlib/bondfree.c: In function 'tab_angles': ../../../src/gmxlib/bondfree.c:1887:12: warning: unused variable 'snt' [-Wunused-variable] real snt,st,sth; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/bondfree.c:42: ../../../src/gmxlib/bondfree.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/bondfree.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/bondfree.c:56:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o enxio.lo ../../../src/gmxlib/enxio.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/do_fit.c -fPIC -DPIC -o .libs/do_fit.o ../../../src/gmxlib/do_fit.c: In function 'calc_fit_R': ../../../src/gmxlib/do_fit.c:103:18: warning: unused variable 'm' [-Wunused-variable] int c,r,n,j,m,i,irot,s; ^ ../../../src/gmxlib/do_fit.c: In function 'do_fit_ndim': ../../../src/gmxlib/do_fit.c:214:10: warning: unused variable 'i' [-Wunused-variable] int i,j,m,r,c; ^ In file included from ../../../src/gmxlib/do_fit.c:40:0: ../../../src/gmxlib/do_fit.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/do_fit.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/enxio.c -fPIC -DPIC -o .libs/enxio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ewald_util.lo ../../../src/gmxlib/ewald_util.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fatal.lo ../../../src/gmxlib/gmx_fatal.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ffscanf.lo ../../../src/gmxlib/ffscanf.c ../../../src/gmxlib/enxio.c: In function 'empty_file': ../../../src/gmxlib/enxio.c:220:8: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret; ^ ../../../src/gmxlib/enxio.c: In function 'get_enx_state': ../../../src/gmxlib/enxio.c:443:16: warning: unused variable 'pcouplmu_nm' [-Wunused-variable] static char *pcouplmu_nm[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/enxio.c:46: ../../../src/gmxlib/enxio.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/enxio.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ewald_util.c -fPIC -DPIC -o .libs/ewald_util.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_fatal.c -fPIC -DPIC -o .libs/gmx_fatal.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ffscanf.c -fPIC -DPIC -o .libs/ffscanf.o In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/gmx_fatal.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/gmx_fatal.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/gmx_fatal.c:115:13: warning: 'bputi' defined but not used [-Wunused-function] static void bputi(char *msg,int *len,int val,int radix,int fld,bool bNeg) ^ ../../../src/gmxlib/gmx_fatal.c:226:13: warning: 'fatal_error' defined but not used [-Wunused-function] static void fatal_error(int f_errno,const char *fmt,...) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/ewald_util.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/ewald_util.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o filenm.lo ../../../src/gmxlib/filenm.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o futil.lo ../../../src/gmxlib/futil.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/filenm.c -fPIC -DPIC -o .libs/filenm.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gbutil.lo ../../../src/gmxlib/gbutil.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/futil.c -fPIC -DPIC -o .libs/futil.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxfio.lo ../../../src/gmxlib/gmxfio.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ifunc.lo ../../../src/gmxlib/ifunc.c ../../../src/gmxlib/filenm.c: In function 'add_suffix_to_output_names': ../../../src/gmxlib/filenm.c:811:12: warning: unused variable 'pos' [-Wunused-variable] int i,j,pos; ^ In file included from ../../../include/wman.h:44:0, from ../../../src/gmxlib/filenm.c:48: ../../../src/gmxlib/filenm.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gbutil.c -fPIC -DPIC -o .libs/gbutil.o ../../../src/gmxlib/futil.c: In function 'ffopen': ../../../src/gmxlib/futil.c:287:18: warning: unused variable 'bf' [-Wunused-variable] char buf[256],*bf,*bufsize=0,*ptr; ^ ../../../src/gmxlib/futil.c: In function 'get_libdir': ../../../src/gmxlib/futil.c:397:22: warning: variable 'pdum' set but not used [-Wunused-but-set-variable] char *dir,*ptr,*s,*pdum; ^ ../../../src/gmxlib/futil.c:395:8: warning: unused variable 'test_file' [-Wunused-variable] char test_file[MAX_PATHBUF]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/futil.c:53: ../../../src/gmxlib/futil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o index.lo ../../../src/gmxlib/index.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ifunc.c -fPIC -DPIC -o .libs/ifunc.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmxfio.c -fPIC -DPIC -o .libs/gmxfio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o cinvsqrtdata.lo ../../../src/gmxlib/cinvsqrtdata.c ../../../src/gmxlib/gmxfio.c: In function 'gmx_fio_fopen': ../../../src/gmxlib/gmxfio.c:803:8: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/gmxlib/gmxfio.c: In function 'gmx_fio_get_output_file_positions': ../../../src/gmxlib/gmxfio.c:885:27: warning: unused variable 'pos' [-Wunused-variable] long pos; ^ ../../../src/gmxlib/gmxfio.c:884:34: warning: unused variable 'pos_lo' [-Wunused-variable] int pos_hi,pos_lo; ^ ../../../src/gmxlib/gmxfio.c:884:27: warning: unused variable 'pos_hi' [-Wunused-variable] int pos_hi,pos_lo; ^ ../../../src/gmxlib/gmxfio.c:883:36: warning: unused variable 'rc' [-Wunused-variable] int i,nfiles,rc,nalloc; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/index.c -fPIC -DPIC -o .libs/index.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o invblock.lo ../../../src/gmxlib/invblock.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/cinvsqrtdata.c -fPIC -DPIC -o .libs/cinvsqrtdata.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o macros.lo ../../../src/gmxlib/macros.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o orires.lo ../../../src/gmxlib/orires.c In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/gbutil.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/gbutil.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/gbutil.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/index.c: In function 'analyse_prot': ../../../src/gmxlib/index.c:298:15: warning: unused variable 'nnpres' [-Wunused-variable] int nra,nnpres,npres; ^ ../../../src/gmxlib/index.c: In function 'init_index': ../../../src/gmxlib/index.c:532:19: warning: variable 'nread' set but not used [-Wunused-but-set-variable] int i,j,ng,nread; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/index.c:48: ../../../src/gmxlib/index.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/index.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/invblock.c -fPIC -DPIC -o .libs/invblock.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/macros.c -fPIC -DPIC -o .libs/macros.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/orires.c -fPIC -DPIC -o .libs/orires.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sparsematrix.lo ../../../src/gmxlib/sparsematrix.c ../../../src/gmxlib/orires.c: In function 'init_orires': ../../../src/gmxlib/orires.c:59:26: warning: unused variable 'nr' [-Wunused-variable] int i,j,d,ex,nmol,nr,*nr_ex; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/orires.c:43: ../../../src/gmxlib/orires.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/orires.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/orires.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o main.lo ../../../src/gmxlib/main.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o maths.lo ../../../src/gmxlib/maths.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/sparsematrix.c -fPIC -DPIC -o .libs/sparsematrix.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/main.c -fPIC -DPIC -o .libs/main.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/maths.c -fPIC -DPIC -o .libs/maths.o ../../../src/gmxlib/maths.c: In function 'gmx_erfc': ../../../src/gmxlib/maths.c:291:31: warning: unused variable 'z4' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:28: warning: unused variable 'z2' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:25: warning: unused variable 's3' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:22: warning: unused variable 's2' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:19: warning: unused variable 's1' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:16: warning: unused variable 'r2' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:13: warning: unused variable 'r1' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ In file included from ../../../src/gmxlib/maths.c:43:0: ../../../src/gmxlib/maths.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o matio.lo ../../../src/gmxlib/matio.c ../../../src/gmxlib/main.c: In function 'par_fn': ../../../src/gmxlib/main.c:68:7: warning: unused variable 'n' [-Wunused-variable] int n; ^ ../../../src/gmxlib/main.c: In function 'gmx_log_open': ../../../src/gmxlib/main.c:124:12: warning: unused variable 'testlen' [-Wunused-variable] int len,testlen,pid; ^ ../../../src/gmxlib/main.c: In function 'init_multisystem': ../../../src/gmxlib/main.c:235:8: warning: unused variable 'rank' [-Wunused-variable] int *rank; ^ ../../../src/gmxlib/main.c: In function 'init_par': ../../../src/gmxlib/main.c:309:13: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/main.c:308:15: warning: variable 'argv' set but not used [-Wunused-but-set-variable] char **argv; ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/gmxlib/main.c:52: ../../../src/gmxlib/main.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/gmxlib/main.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/gmxlib/main.c:52: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mshift.lo ../../../src/gmxlib/mshift.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mtop_util.lo ../../../src/gmxlib/mtop_util.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/matio.c -fPIC -DPIC -o .libs/matio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mtxio.lo ../../../src/gmxlib/mtxio.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mshift.c -fPIC -DPIC -o .libs/mshift.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mtop_util.c -fPIC -DPIC -o .libs/mtop_util.o ../../../src/gmxlib/matio.c: In function 'write_xpm_map_split': ../../../src/gmxlib/matio.c:636:16: warning: unused variable 'fac' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:14: warning: unused variable 'b' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:12: warning: unused variable 'g' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:10: warning: unused variable 'r' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:635:10: warning: unused variable 'i' [-Wunused-variable] int i,ntot; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mvdata.lo ../../../src/gmxlib/mvdata.c ../../../src/gmxlib/mshift.c: In function 'compact_graph': ../../../src/gmxlib/mshift.c:243:12: warning: unused variable 'e' [-Wunused-variable] atom_id *e; ^ ../../../src/gmxlib/mshift.c:242:9: warning: unused variable 'j' [-Wunused-variable] int i,j,n,max_nedge; ^ ../../../src/gmxlib/mshift.c: In function 'mk_graph_ilist': ../../../src/gmxlib/mshift.c:307:13: warning: variable 'nbtot' set but not used [-Wunused-but-set-variable] int i,nbtot; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/mshift.c:44: ../../../src/gmxlib/mshift.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/mshift.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/mshift.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/matio.c:48: ../../../src/gmxlib/matio.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/matio.c:50:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_atomnr_to_molblock_ind': ../../../src/gmxlib/mtop_util.c:105:14: warning: unused variable 'atoms' [-Wunused-variable] t_atoms *atoms; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_atominfo_global': ../../../src/gmxlib/mtop_util.c:132:21: warning: unused variable 'molb' [-Wunused-variable] gmx_molblock_t *molb; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_ilistloop_all_next': ../../../src/gmxlib/mtop_util.c:384:21: warning: unused variable 'molb' [-Wunused-variable] gmx_molblock_t *molb; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_global_cgs': ../../../src/gmxlib/mtop_util.c:438:14: warning: unused variable 'atoms' [-Wunused-variable] t_atoms *atoms; ^ ../../../src/gmxlib/mtop_util.c: In function 'gen_local_top': ../../../src/gmxlib/mtop_util.c:669:31: warning: unused variable 'mt' [-Wunused-variable] int mb,srcnr,destnr,ftype,mt,natoms,nposre_old; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o names.lo ../../../src/gmxlib/names.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mtxio.c -fPIC -DPIC -o .libs/mtxio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o network.lo ../../../src/gmxlib/network.c ../../../src/gmxlib/mtxio.c: In function 'gmx_mtxio_write': ../../../src/gmxlib/mtxio.c:90:13: warning: variable 'xd' set but not used [-Wunused-but-set-variable] XDR * xd; ^ ../../../src/gmxlib/mtxio.c: In function 'gmx_mtxio_read': ../../../src/gmxlib/mtxio.c:164:13: warning: variable 'xd' set but not used [-Wunused-but-set-variable] XDR * xd; ^ In file included from ../../../src/gmxlib/mtxio.c:48:0: ../../../src/gmxlib/mtxio.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrama.lo ../../../src/gmxlib/nrama.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/names.c -fPIC -DPIC -o .libs/names.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mvdata.c -fPIC -DPIC -o .libs/mvdata.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrjac.lo ../../../src/gmxlib/nrjac.c ../../../src/gmxlib/mvdata.c: In function 'bc_atoms': ../../../src/gmxlib/mvdata.c:147:7: warning: unused variable 'dummy' [-Wunused-variable] int dummy; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_groups': ../../../src/gmxlib/mvdata.c:162:7: warning: unused variable 'dummy' [-Wunused-variable] int dummy; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_ffparams': ../../../src/gmxlib/mvdata.c:290:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_molblock': ../../../src/gmxlib/mvdata.c:427:8: warning: unused variable 'bAlloc' [-Wunused-variable] bool bAlloc=TRUE; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/mvdata.c:50: ../../../src/gmxlib/mvdata.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/mvdata.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/mvdata.c:275:13: warning: 'bc_idef' defined but not used [-Wunused-function] static void bc_idef(const t_commrec *cr,t_idef *idef) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrama.c -fPIC -DPIC -o .libs/nrama.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrjac.c -fPIC -DPIC -o .libs/nrjac.o ../../../src/gmxlib/nrama.c: In function 'get_dih2': ../../../src/gmxlib/nrama.c:179:11: warning: unused variable 'found' [-Wunused-variable] int found,**ff,thisff[NPP]; ^ ../../../src/gmxlib/nrama.c: In function 'init_rama': ../../../src/gmxlib/nrama.c:307:10: warning: unused variable 'ePBC' [-Wunused-variable] int ePBC; ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/nrama.h:45, from ../../../src/gmxlib/nrama.c:49: ../../../src/gmxlib/nrama.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/nrama.c:176:13: warning: 'get_dih2' defined but not used [-Wunused-function] static void get_dih2(t_xrama *xr,t_functype functype[], ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrnb.lo ../../../src/gmxlib/nrnb.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/network.c -fPIC -DPIC -o .libs/network.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/nrjac.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pargs.lo ../../../src/gmxlib/pargs.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pbc.lo ../../../src/gmxlib/pbc.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrnb.c -fPIC -DPIC -o .libs/nrnb.o ../../../src/gmxlib/network.c: In function 'gmx_mpi_initialized': ../../../src/gmxlib/network.c:57:7: warning: unused variable 'n' [-Wunused-variable] int n; ^ ../../../src/gmxlib/network.c: In function 'gmx_setup_nodecomm': ../../../src/gmxlib/network.c:245:40: warning: unused variable 'ni' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:37: warning: unused variable 'ng' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:35: warning: unused variable 'j' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:33: warning: unused variable 'i' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:25: warning: unused variable 'hostnum' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:15: warning: unused variable 'resultlen' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:10: warning: unused variable 'rank' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c:245:8: warning: unused variable 'n' [-Wunused-variable] int n,rank,resultlen,hostnum,i,j,ng,ni; ^ ../../../src/gmxlib/network.c: In function 'gmx_finalize': ../../../src/gmxlib/network.c:522:7: warning: unused variable 'ret' [-Wunused-variable] int ret; ^ In file included from ../../../src/gmxlib/network.c:45:0: ../../../src/gmxlib/network.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/network.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/nrnb.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pargs.c -fPIC -DPIC -o .libs/pargs.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pbc.c -fPIC -DPIC -o .libs/pbc.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdbio.lo ../../../src/gmxlib/pdbio.c ../../../src/gmxlib/pargs.c: In function 'print_pargs': ../../../src/gmxlib/pargs.c:306:26: warning: unused variable 'tmp' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ ../../../src/gmxlib/pargs.c:306:16: warning: unused variable 'buf2' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ ../../../src/gmxlib/pargs.c:306:8: warning: unused variable 'buf' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pargs.c:51: ../../../src/gmxlib/pargs.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pargs.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pdbio.c -fPIC -DPIC -o .libs/pdbio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o princ.lo ../../../src/gmxlib/princ.c ../../../src/gmxlib/pbc.c: In function 'low_set_pbc': /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rando.lo ../../../src/gmxlib/rando.c ../../../src/gmxlib/pbc.c:272:8: warning: unused variable 'bXY' [-Wunused-variable] bool bXY,bUse; ^ ../../../src/gmxlib/pbc.c: In function 'put_atom_in_box': ../../../src/gmxlib/pbc.c:1300:7: warning: unused variable 'i' [-Wunused-variable] int i,m,d; ^ ../../../src/gmxlib/pbc.c: In function 'put_atoms_in_box': ../../../src/gmxlib/pbc.c:1314:11: warning: unused variable 'd' [-Wunused-variable] int i,m,d; ^ ../../../src/gmxlib/pbc.c:1314:9: warning: unused variable 'm' [-Wunused-variable] int i,m,d; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pbc.c:43: ../../../src/gmxlib/pbc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pbc.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/princ.c -fPIC -DPIC -o .libs/princ.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/princ.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/princ.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/princ.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/princ.c:48:13: warning: 'm_op' defined but not used [-Wunused-function] static void m_op(matrix mat,rvec x) ^ ../../../src/gmxlib/princ.c:249:13: warning: 'dump_shit' defined but not used [-Wunused-function] static void dump_shit(FILE *out,matrix trans,rvec prcomp,real totmass) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o random.lo ../../../src/gmxlib/random.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/random.c -fPIC -DPIC -o .libs/random.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_random.lo ../../../src/gmxlib/gmx_random.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rbin.lo ../../../src/gmxlib/rbin.c ../../../src/gmxlib/random.c: In function 'maxwell_speed': ../../../src/gmxlib/random.c:94:11: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/random.c:93:12: warning: unused variable 'dummy' [-Wunused-variable] atom_id *dummy; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/random.c:45: ../../../src/gmxlib/random.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/random.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pdbio.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pdbio.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/pdbio.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rando.c -fPIC -DPIC -o .libs/rando.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readinp.lo ../../../src/gmxlib/readinp.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o replace.lo ../../../src/gmxlib/replace.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_random.c -fPIC -DPIC -o .libs/gmx_random.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rbin.c -fPIC -DPIC -o .libs/rbin.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rmpbc.lo ../../../src/gmxlib/rmpbc.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/readinp.c -fPIC -DPIC -o .libs/readinp.o In file included from ../../../src/gmxlib/readinp.c:46:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/replace.c -fPIC -DPIC -o .libs/replace.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rmpbc.c -fPIC -DPIC -o .libs/rmpbc.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shift_util.lo ../../../src/gmxlib/shift_util.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sortwater.lo ../../../src/gmxlib/sortwater.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o smalloc.lo ../../../src/gmxlib/smalloc.c ../../../src/gmxlib/gmx_random.c: In function 'gmx_rng_make_seed': ../../../src/gmxlib/gmx_random.c:146:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/shift_util.c -fPIC -DPIC -o .libs/shift_util.o ../../../src/gmxlib/gmx_random.c: In function 'gmx_rng_update': ../../../src/gmxlib/gmx_random.c:168:7: warning: variable 'mti' set but not used [-Wunused-but-set-variable] int mti,k; ^ ../../../src/gmxlib/gmx_random.c:167:16: warning: unused variable 'lastx' [-Wunused-variable] unsigned int lastx,x1,x2,y,*mt; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o statutil.lo ../../../src/gmxlib/statutil.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strdb.lo ../../../src/gmxlib/strdb.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/sortwater.c -fPIC -DPIC -o .libs/sortwater.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/rmpbc.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/rmpbc.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/rmpbc.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/shift_util.c: In function 'shift_LRcorrection': ../../../src/gmxlib/shift_util.c:257:10: warning: unused variable 'shift' [-Wunused-variable] ivec shift; ^ ../../../src/gmxlib/shift_util.c:253:42: warning: unused variable 'qtot' [-Wunused-variable] real qi,dr,dr2,dr_1,dr_3,fscal,Vexcl,qtot=0; ^ ../../../src/gmxlib/shift_util.c:252:10: warning: unused variable 'isp' [-Wunused-variable] double isp=0.564189583547756; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/shift_util.c:43: ../../../src/gmxlib/shift_util.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/shift_util.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/shift_util.c:370:13: warning: 'rgbset' defined but not used [-Wunused-function] static real rgbset(real col) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/smalloc.c -fPIC -DPIC -o .libs/smalloc.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o string2.lo ../../../src/gmxlib/string2.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/statutil.c -fPIC -DPIC -o .libs/statutil.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/sortwater.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/sortwater.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/strdb.c -fPIC -DPIC -o .libs/strdb.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o symtab.lo ../../../src/gmxlib/symtab.c ../../../src/gmxlib/statutil.c: In function 'check_times2': ../../../src/gmxlib/statutil.c:152:8: warning: variable 'margin' set but not used [-Wunused-but-set-variable] real margin; ^ ../../../src/gmxlib/statutil.c: In function 'parse_common_args': ../../../src/gmxlib/statutil.c:528:14: warning: unused variable 'newdesc' [-Wunused-variable] char *ptr,*newdesc; ^ ../../../src/gmxlib/statutil.c:528:9: warning: unused variable 'ptr' [-Wunused-variable] char *ptr,*newdesc; ^ ../../../src/gmxlib/statutil.c:491:11: warning: unused variable 'npri_pa' [-Wunused-variable] t_pargs npri_pa = { "-npri", FALSE, etINT, {&npri}, ^ ../../../src/gmxlib/statutil.c:485:27: warning: unused variable 'mantp' [-Wunused-variable] static int nicelevel=0,mantp=0,npri=0,debug_level=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/statutil.c:47: ../../../src/gmxlib/statutil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/statutil.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/statutil.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/statutil.c:73:14: warning: 'timelabel' defined but not used [-Wunused-variable] static char *timelabel = NULL; ^ ../../../src/gmxlib/statutil.c:361:13: warning: 'pdesc' defined but not used [-Wunused-function] static void pdesc(char *desc) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/string2.c -fPIC -DPIC -o .libs/string2.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topsort.lo ../../../src/gmxlib/topsort.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpxio.lo ../../../src/gmxlib/tpxio.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/symtab.c -fPIC -DPIC -o .libs/symtab.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/topsort.c -fPIC -DPIC -o .libs/topsort.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trnio.lo ../../../src/gmxlib/trnio.c ../../../src/gmxlib/topsort.c: In function 'gmx_sort_ilist_fe': ../../../src/gmxlib/topsort.c:142:10: warning: unused variable 'bPert' [-Wunused-variable] bool bPert; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trxio.lo ../../../src/gmxlib/trxio.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o txtdump.lo ../../../src/gmxlib/txtdump.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o typedefs.lo ../../../src/gmxlib/typedefs.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/tpxio.c -fPIC -DPIC -o .libs/tpxio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o viewit.lo ../../../src/gmxlib/viewit.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wgms.lo ../../../src/gmxlib/wgms.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/trnio.c -fPIC -DPIC -o .libs/trnio.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wman.lo ../../../src/gmxlib/wman.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/trxio.c -fPIC -DPIC -o .libs/trxio.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/txtdump.c -fPIC -DPIC -o .libs/txtdump.o ../../../src/gmxlib/txtdump.c: In function 'pr_qm_opts': ../../../src/gmxlib/txtdump.c:339:11: warning: unused variable 'j' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c:339:9: warning: unused variable 'm' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c:339:7: warning: unused variable 'i' [-Wunused-variable] int i,m,j; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/trxio.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/trxio.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/trxio.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/trxio.c:53:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_ffparams': ../../../src/gmxlib/txtdump.c:906:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_block_title': ../../../src/gmxlib/txtdump.c:950:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_blocka_title': ../../../src/gmxlib/txtdump.c:963:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_block': ../../../src/gmxlib/txtdump.c:1016:9: warning: unused variable 'j' [-Wunused-variable] int i,j,ok,size,start,end; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_atom': ../../../src/gmxlib/txtdump.c:1120:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_groups': ../../../src/gmxlib/txtdump.c:1151:9: warning: unused variable 'grpnr' [-Wunused-variable] int grpnr[egcNR]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/txtdump.c:51: ../../../src/gmxlib/txtdump.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/txtdump.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/txtdump.c:976:13: warning: 'low_pr_block' defined but not used [-Wunused-function] static void low_pr_block(FILE *fp,int indent,const char *title,t_block *block, bool bShowNumbers) ^ ../../../src/gmxlib/tpxio.c: In function 'do_ilist': x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/typedefs.c -fPIC -DPIC -o .libs/typedefs.o ../../../src/gmxlib/tpxio.c:987:10: warning: unused variable 'k' [-Wunused-variable] int i,k,idum; ^ ../../../src/gmxlib/tpxio.c: In function 'do_ffparams': ../../../src/gmxlib/tpxio.c:1008:15: warning: unused variable 'j' [-Wunused-variable] int idum,i,j,k; ^ ../../../src/gmxlib/tpxio.c: In function 'do_ilists': ../../../src/gmxlib/tpxio.c:1061:8: warning: unused variable 'bDum' [-Wunused-variable] bool bDum=TRUE,bClear; ^ ../../../src/gmxlib/tpxio.c:1060:13: warning: unused variable 'renum' [-Wunused-variable] int i,j,k,renum[F_NRE]; ^ ../../../src/gmxlib/tpxio.c:1060:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k,renum[F_NRE]; ^ ../../../src/gmxlib/tpxio.c: In function 'do_groups': ../../../src/gmxlib/tpxio.c:1276:10: warning: unused variable 'n' [-Wunused-variable] int g,n,i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_moltype': x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/viewit.c -fPIC -DPIC -o .libs/viewit.o ../../../src/gmxlib/tpxio.c:1393:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_molblock': ../../../src/gmxlib/tpxio.c:1420:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_mtop': x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/wgms.c -fPIC -DPIC -o .libs/wgms.o ../../../src/gmxlib/tpxio.c:1547:14: warning: unused variable 'i' [-Wunused-variable] int mt,mb,i; ^ ../../../src/gmxlib/tpxio.c: In function 'read_tpx_top': ../../../src/gmxlib/tpxio.c:2005:15: warning: unused variable 'ltop' [-Wunused-variable] t_topology *ltop; ^ ../../../src/gmxlib/tpxio.c: In function 'read_tps_conf': ../../../src/gmxlib/tpxio.c:2035:17: warning: unused variable 'topconv' [-Wunused-variable] t_topology *topconv; ^ In file included from ../../../src/gmxlib/tpxio.c:60:0: ../../../src/gmxlib/tpxio.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/tpxio.c:61: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/tpxio.c:61:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/viewit.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/wman.c -fPIC -DPIC -o .libs/wman.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o writeps.lo ../../../src/gmxlib/writeps.c ../../../src/gmxlib/typedefs.c: In function 'init_block': In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/wgms.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/typedefs.c:64:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_blocka': ../../../src/gmxlib/typedefs.c:74:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_atom': ../../../src/gmxlib/typedefs.c:87:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_top': ../../../src/gmxlib/typedefs.c:135:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'done_top': ../../../src/gmxlib/typedefs.c:284:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_state': ../../../src/gmxlib/typedefs.c:386:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/typedefs.c:43: ../../../src/gmxlib/typedefs.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/typedefs.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/wman.c: In function 'mydate': ../../../src/gmxlib/wman.c:168:15: warning: unused variable 'num' [-Wunused-variable] const char *num[] = { "01", "02", "03", "04", "05", "06","07", "08", "09" }; ^ ../../../src/gmxlib/wman.c: In function 'print_tty_formatted': ../../../src/gmxlib/wman.c:510:16: warning: unused variable 'j' [-Wunused-variable] int buflen,i,j; ^ ../../../src/gmxlib/wman.c: In function 'write_wikiman': ../../../src/gmxlib/wman.c:631:14: warning: unused variable 'tmp2' [-Wunused-variable] char *tmp,*tmp2; ^ ../../../src/gmxlib/wman.c:630:17: warning: unused variable 'link' [-Wunused-variable] char buf[256],link[10]; ^ ../../../src/gmxlib/wman.c: In function 'write_htmlman': ../../../src/gmxlib/wman.c:682:8: warning: unused variable 'link' [-Wunused-variable] char link[10],tmp[255]; ^ ../../../src/gmxlib/wman.c: In function 'write_py': ../../../src/gmxlib/wman.c:925:8: warning: unused variable 'bHidden' [-Wunused-variable] bool bHidden; ^ In file included from ../../../src/gmxlib/wman.c:48:0: ../../../src/gmxlib/wman.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdrd.lo ../../../src/gmxlib/xdrd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/writeps.c -fPIC -DPIC -o .libs/writeps.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xtcio.lo ../../../src/gmxlib/xtcio.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xdrd.c -fPIC -DPIC -o .libs/xdrd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xtcio.c -fPIC -DPIC -o .libs/xtcio.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/xtcio.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/xtcio.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/writeps.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xvgr.lo ../../../src/gmxlib/xvgr.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o libxdrf.lo ../../../src/gmxlib/libxdrf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/libxdrf.c -fPIC -DPIC -o .libs/libxdrf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xvgr.c -fPIC -DPIC -o .libs/xvgr.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_arpack.lo ../../../src/gmxlib/gmx_arpack.c ../../../src/gmxlib/xvgr.c: In function 'use_xmgr': ../../../src/gmxlib/xvgr.c:56:8: warning: unused variable 'bXMGR' [-Wunused-variable] bool bXMGR; ^ ../../../src/gmxlib/xvgr.c: In function 'read_xvg_time': ../../../src/gmxlib/xvgr.c:402:14: warning: unused variable 'tend' [-Wunused-variable] double dbl,tend=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/xvgr.c:45: ../../../src/gmxlib/xvgr.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/xvgr.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/xvgr.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/xvgr.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_arpack.c -fPIC -DPIC -o .libs/gmx_arpack.o In file included from ../../../include/xdrf.h:41:0, from ../../../src/gmxlib/libxdrf.c:46: ../../../src/gmxlib/libxdrf.c:145:10: warning: return type defaults to 'int' [-Wimplicit-int] F77_FUNC(xdrfshort,XDRFSHORT)(int *xdrid, short *sp, int *ret) ^ ../../src/config.h:28:29: note: in definition of macro 'F77_FUNC' #define F77_FUNC(name,NAME) name ## _ ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dihres.lo ../../../src/gmxlib/dihres.c ../../../src/gmxlib/libxdrf.c: In function 'xdr3dfcoord': ../../../src/gmxlib/libxdrf.c:705:9: warning: unused variable 'rc' [-Wunused-variable] int rc; ^ ../../../src/gmxlib/libxdrf.c: In function 'xtc_get_next_frame_start': ../../../src/gmxlib/libxdrf.c:1374:9: warning: unused variable 'inp' [-Wunused-variable] int inp; ^ ../../../src/gmxlib/libxdrf.c: In function 'xdr_xtc_seek_time': ../../../src/gmxlib/libxdrf.c:1522:9: warning: unused variable 'res' [-Wunused-variable] int res; ^ ../../../src/gmxlib/libxdrf.c: In function 'xtc_get_last_frame_number': ../../../src/gmxlib/libxdrf.c:1691:9: warning: unused variable 'res' [-Wunused-variable] int res; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/libxdrf.c:45: ../../../src/gmxlib/libxdrf.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/libxdrf.c: In function 'xdrfshort_': ../../../src/gmxlib/libxdrf.c:149:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tcontrol.lo ../../../src/gmxlib/tcontrol.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o splitter.lo ../../../src/gmxlib/splitter.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_cyclecounter.lo ../../../src/gmxlib/gmx_cyclecounter.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/tcontrol.c -fPIC -DPIC -o .libs/tcontrol.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/dihres.c -fPIC -DPIC -o .libs/dihres.o In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/tcontrol.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/tcontrol.c:61:22: warning: 'timeconvert' defined but not used [-Wunused-variable] static t_timeconvert timeconvert[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/splitter.c -fPIC -DPIC -o .libs/splitter.o ../../../src/gmxlib/dihres.c: In function 'ta_dihres': ../../../src/gmxlib/dihres.c:77:30: warning: unused variable 'dp2' [-Wunused-variable] real phi0,phi,ddphi,ddp,dp,dp2,dphi,kfac,cos_phi,sign,d2r,fc; ^ ../../../src/gmxlib/dihres.c:76:29: warning: unused variable 'typep' [-Wunused-variable] int ai,aj,ak,al,i,k,type,typep,label,power,t1,t2,t3; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/dihres.c:46: ../../../src/gmxlib/dihres.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/dihres.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/dihres.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_cyclecounter.c -fPIC -DPIC -o .libs/gmx_cyclecounter.o ../../../src/gmxlib/splitter.c: In function 'split_force2': ../../../src/gmxlib/splitter.c:112:17: warning: variable 'type' set but not used [-Wunused-but-set-variable] int i,j,k,type,nodeid,nratoms,tnr; ^ ../../../src/gmxlib/splitter.c:112:13: warning: unused variable 'j' [-Wunused-variable] int i,j,k,type,nodeid,nratoms,tnr; ^ ../../../src/gmxlib/splitter.c: In function 'mk_border': ../../../src/gmxlib/splitter.c:244:14: warning: unused variable 'j' [-Wunused-variable] int i,j,is,ic,ns,nc,nbor; ^ ../../../src/gmxlib/splitter.c: In function 'split_blocks': ../../../src/gmxlib/splitter.c:316:11: warning: unused variable 'bSHK' [-Wunused-variable] bool bSHK; ^ ../../../src/gmxlib/splitter.c:312:19: warning: unused variable 'last_shk' [-Wunused-variable] int nodeid,last_shk,nbor; ^ ../../../src/gmxlib/splitter.c:311:17: warning: unused variable 'ai' [-Wunused-variable] int i,ii,ai,b0,b1; ^ ../../../src/gmxlib/splitter.c:311:14: warning: unused variable 'ii' [-Wunused-variable] int i,ii,ai,b0,b1; ^ ../../../src/gmxlib/splitter.c: In function 'merge_sid': ../../../src/gmxlib/splitter.c:556:8: warning: unused variable 'nChanged' [-Wunused-variable] int nChanged; ^ ../../../src/gmxlib/splitter.c: In function 'gen_sblocks': ../../../src/gmxlib/splitter.c:654:11: warning: unused variable 'isid' [-Wunused-variable] int isid,nsid; ^ ../../../src/gmxlib/splitter.c:652:27: warning: unused variable 'n' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:20: warning: unused variable 'istart' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:18: warning: unused variable 'k' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:16: warning: unused variable 'j' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c: In function 'split_top': ../../../src/gmxlib/splitter.c:755:21: warning: unused variable 'minidx' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:755:15: warning: unused variable 'ihome' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:755:7: warning: unused variable 'minhome' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:754:14: warning: unused variable 'ia' [-Wunused-variable] t_iatom *ia; ^ ../../../src/gmxlib/splitter.c:753:31: warning: unused variable 'nrd' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:27: warning: unused variable 'nra' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:13: warning: unused variable 'nvsite_constr' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:7: warning: unused variable 'ftype' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:748:59: warning: unused variable 'nodeid' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:52: warning: unused variable 'bstart' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:47: warning: unused variable 'send' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:40: warning: unused variable 'sstart' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:32: warning: unused variable 'maxatom' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:18: warning: unused variable 'i' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c: At top level: ../../../src/gmxlib/splitter.c:726:17: warning: 'block2blocka' defined but not used [-Wunused-function] static t_blocka block2blocka(t_block *block) ^ /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libgmx_d.la -rpath /usr/lib64 3dview.lo atomprop.lo bondfree.lo calcgrid.lo calch.lo checkpoint.lo confio.lo copyrite.lo disre.lo do_fit.lo enxio.lo ewald_util.lo gmx_fatal.lo ffscanf.lo filenm.lo futil.lo gbutil.lo gmxfio.lo ifunc.lo index.lo cinvsqrtdata.lo invblock.lo macros.lo orires.lo sparsematrix.lo main.lo maths.lo matio.lo mshift.lo mtop_util.lo mtxio.lo mvdata.lo names.lo network.lo nrama.lo nrjac.lo nrnb.lo pargs.lo pbc.lo pdbio.lo princ.lo rando.lo random.lo gmx_random.lo rbin.lo readinp.lo replace.lo rmpbc.lo shift_util.lo sortwater.lo smalloc.lo statutil.lo strdb.lo string2.lo symtab.lo topsort.lo tpxio.lo trnio.lo trxio.lo txtdump.lo typedefs.lo viewit.lo wgms.lo wman.lo writeps.lo xdrd.lo xtcio.lo xvgr.lo libxdrf.lo gmx_arpack.lo dihres.lo tcontrol.lo splitter.lo gmx_cyclecounter.lo nonbonded/libnonbonded.la gmx_blas/libblas.la gmx_lapack/liblapack.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath x86_64-alt-linux-gcc -shared .libs/3dview.o .libs/atomprop.o .libs/bondfree.o .libs/calcgrid.o .libs/calch.o .libs/checkpoint.o .libs/confio.o .libs/copyrite.o .libs/disre.o .libs/do_fit.o .libs/enxio.o .libs/ewald_util.o .libs/gmx_fatal.o .libs/ffscanf.o .libs/filenm.o .libs/futil.o .libs/gbutil.o .libs/gmxfio.o .libs/ifunc.o .libs/index.o .libs/cinvsqrtdata.o .libs/invblock.o .libs/macros.o .libs/orires.o .libs/sparsematrix.o .libs/main.o .libs/maths.o .libs/matio.o .libs/mshift.o .libs/mtop_util.o .libs/mtxio.o .libs/mvdata.o .libs/names.o .libs/network.o .libs/nrama.o .libs/nrjac.o .libs/nrnb.o .libs/pargs.o .libs/pbc.o .libs/pdbio.o .libs/princ.o .libs/rando.o .libs/random.o .libs/gmx_random.o .libs/rbin.o .libs/readinp.o .libs/replace.o .libs/rmpbc.o .libs/shift_util.o .libs/sortwater.o .libs/smalloc.o .libs/statutil.o .libs/strdb.o .libs/string2.o .libs/symtab.o .libs/topsort.o .libs/tpxio.o .libs/trnio.o .libs/trxio.o .libs/txtdump.o .libs/typedefs.o .libs/viewit.o .libs/wgms.o .libs/wman.o .libs/writeps.o .libs/xdrd.o .libs/xtcio.o .libs/xvgr.o .libs/libxdrf.o .libs/gmx_arpack.o .libs/dihres.o .libs/tcontrol.o .libs/splitter.o .libs/gmx_cyclecounter.o -Wl,--whole-archive nonbonded/.libs/libnonbonded.a gmx_blas/.libs/libblas.a gmx_lapack/.libs/liblapack.a -Wl,--no-whole-archive -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lgslcblas -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libgmx_d.so.5 -o .libs/libgmx_d.so.5.0.0 (cd .libs && rm -f libgmx_d.so.5 && ln -s libgmx_d.so.5.0.0 libgmx_d.so.5) (cd .libs && rm -f libgmx_d.so && ln -s libgmx_d.so.5.0.0 libgmx_d.so) creating libgmx_d.la (cd .libs && rm -f libgmx_d.la && ln -s ../libgmx_d.la libgmx_d.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' Making all in mdlib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcmu.lo ../../../src/mdlib/calcmu.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcvir.lo ../../../src/mdlib/calcvir.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o constr.lo ../../../src/mdlib/constr.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o coupling.lo ../../../src/mdlib/coupling.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec.lo ../../../src/mdlib/domdec.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_con.lo ../../../src/mdlib/domdec_con.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_network.lo ../../../src/mdlib/domdec_network.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_setup.lo ../../../src/mdlib/domdec_setup.c mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/calcmu.c -fPIC -DPIC -o .libs/calcmu.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_con.c -fPIC -DPIC -o .libs/domdec_con.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_setup.c -fPIC -DPIC -o .libs/domdec_setup.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/coupling.c -fPIC -DPIC -o .libs/coupling.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/calcvir.c -fPIC -DPIC -o .libs/calcvir.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec.c -fPIC -DPIC -o .libs/domdec.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_network.c -fPIC -DPIC -o .libs/domdec_network.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/constr.c -fPIC -DPIC -o .libs/constr.o ../../../src/mdlib/domdec.c: In function 'dd_move_cellx': ../../../src/mdlib/domdec.c:785:41: warning: unused variable 'k' [-Wunused-variable] int d,d1,dim,dim1,pos,buf_size,i,j,k,p,npulse; ^ ../../../src/mdlib/domdec.c:785:19: warning: unused variable 'dim1' [-Wunused-variable] int d,d1,dim,dim1,pos,buf_size,i,j,k,p,npulse; ^ ../../../src/mdlib/domdec.c: In function 'dd_collect_vec': ../../../src/mdlib/domdec.c:1212:11: warning: unused variable 'buf' [-Wunused-variable] rvec *buf=NULL; ^ ../../../src/mdlib/domdec.c:1211:18: warning: unused variable 'nalloc' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:16: warning: unused variable 'a' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:14: warning: unused variable 'c' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:12: warning: unused variable 'i' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:10: warning: unused variable 'n' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1210:26: warning: unused variable 'ma' [-Wunused-variable] gmx_domdec_master_t *ma; ^ ../../../src/mdlib/domdec.c: In function 'dd_distribute_vec_scatterv': ../../../src/mdlib/domdec.c:1427:18: warning: unused variable 'nalloc' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c: In function 'gmx_ddcoord2pmeindex': ../../../src/mdlib/domdec.c:1805:28: warning: unused variable 'nc' [-Wunused-variable] ivec coords,coords_pme,nc; ^ ../../../src/mdlib/domdec.c:1805:17: warning: unused variable 'coords_pme' [-Wunused-variable] ivec coords,coords_pme,nc; ^ ../../../src/mdlib/domdec.c: In function 'dd_simnode2pmenode': ../../../src/mdlib/domdec.c:1874:16: warning: unused variable 'coord_pme' [-Wunused-variable] ivec coord,coord_pme; ^ ../../../src/mdlib/domdec.c:1874:10: warning: unused variable 'coord' [-Wunused-variable] ivec coord,coord_pme; ^ ../../../src/mdlib/domdec.c: In function 'receive_vir_ener': ../../../src/mdlib/domdec.c:2005:30: warning: unused variable 'rank' [-Wunused-variable] int pmenode,coords[DIM],rank; ^ ../../../src/mdlib/domdec.c:2005:18: warning: unused variable 'coords' [-Wunused-variable] int pmenode,coords[DIM],rank; ^ ../../../src/mdlib/domdec.c: In function 'make_dd_indices': ../../../src/mdlib/domdec.c:2107:11: warning: variable 'bLocalCG' set but not used [-Wunused-but-set-variable] char *bLocalCG; ^ ../../../src/mdlib/domdec.c: In function 'check_bLocalCG': ../../../src/mdlib/domdec.c:2162:9: warning: unused variable 'ncg' [-Wunused-variable] int ncg,i,ngl,nerr; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_top.lo ../../../src/mdlib/domdec_top.c ../../../src/mdlib/domdec.c: In function 'dd_redistribute_cg': ../../../src/mdlib/domdec.c:3706:49: warning: unused variable 'cell_d' [-Wunused-variable] int c,i,cg,k,k0,k1,d,dim,dim2,dir,d2,d3,d4,cell_d; ^ ../../../src/mdlib/domdec.c:3706:46: warning: unused variable 'd4' [-Wunused-variable] int c,i,cg,k,k0,k1,d,dim,dim2,dir,d2,d3,d4,cell_d; ^ ../../../src/mdlib/domdec.c: In function 'get_load_distribution': ../../../src/mdlib/domdec.c:4326:16: warning: unused variable 'cid' [-Wunused-variable] int d,dim,cid,i,pos; ^ ../../../src/mdlib/domdec.c: In function 'setup_dd_grid': ../../../src/mdlib/domdec.c:4781:10: warning: unused variable 'bZYX' [-Wunused-variable] bool bZYX; ^ ../../../src/mdlib/domdec.c: In function 'make_pp_communicator': ../../../src/mdlib/domdec.c:4944:10: warning: unused variable 'periods' [-Wunused-variable] ivec periods; ^ ../../../src/mdlib/domdec.c:4943:18: warning: unused variable 'buf' [-Wunused-variable] int i,rank,*buf; ^ ../../../src/mdlib/domdec.c:4943:12: warning: unused variable 'rank' [-Wunused-variable] int i,rank,*buf; ^ ../../../src/mdlib/domdec.c:4943:10: warning: unused variable 'i' [-Wunused-variable] int i,rank,*buf; ^ ../../../src/mdlib/domdec.c:4942:24: warning: variable 'comm' set but not used [-Wunused-but-set-variable] gmx_domdec_comm_t *comm; ^ ../../../src/mdlib/domdec.c: In function 'receive_ddindex2simnodeid': ../../../src/mdlib/domdec.c:5069:11: warning: unused variable 'buf' [-Wunused-variable] int *buf; ^ ../../../src/mdlib/domdec.c:5068:24: warning: variable 'comm' set but not used [-Wunused-but-set-variable] gmx_domdec_comm_t *comm; ^ ../../../src/mdlib/domdec.c: In function 'split_communicator': ../../../src/mdlib/domdec.c:5131:10: warning: unused variable 'periods' [-Wunused-variable] ivec periods; ^ ../../../src/mdlib/domdec.c:5129:12: warning: unused variable 'rank' [-Wunused-variable] int i,rank; ^ ../../../src/mdlib/domdec.c: In function 'check_dlb_support': ../../../src/mdlib/domdec.c:5598:9: warning: label 'edlbYES' defined but not used [-Wunused-label] edlbYES: ^ ../../../src/mdlib/domdec.c:5594:9: warning: label 'edlbAUTO' defined but not used [-Wunused-label] edlbAUTO: ^ ../../../src/mdlib/domdec.c:5592:9: warning: label 'edlbNO' defined but not used [-Wunused-label] edlbNO: ^ ../../../src/mdlib/domdec.c:5553:19: warning: unused variable 'dd' [-Wunused-variable] gmx_domdec_t *dd; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/calcmu.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/calcmu.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/domdec.c: In function 'init_domain_decomposition': ../../../src/mdlib/domdec.c:5652:14: warning: unused variable 'j' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c:5652:12: warning: unused variable 'i' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c:5652:10: warning: unused variable 'd' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c: In function 'turn_on_dlb': ../../../src/mdlib/domdec.c:6010:10: warning: unused variable 'buf' [-Wunused-variable] char buf[STRLEN]; ^ ../../../src/mdlib/domdec.c: In function 'dd_init_bondeds': ../../../src/mdlib/domdec.c:6086:10: warning: unused variable 'd' [-Wunused-variable] int d; ^ ../../../src/mdlib/domdec.c:6085:10: warning: unused variable 'bBondComm' [-Wunused-variable] bool bBondComm; ^ ../../../src/mdlib/domdec.c: In function 'setup_dd_communication': ../../../src/mdlib/domdec.c:6486:64: warning: unused variable 'inv_ncg' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:58: warning: unused variable 'r2inc' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:47: warning: unused variable 'r_1' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:43: warning: unused variable 'r_0' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:23: warning: unused variable 'r_scomm2' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:10: warning: unused variable 'r_mb' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c: In function 'dd_partition_system': ../../../src/mdlib/domdec.c:7481:12: warning: unused variable 'j' [-Wunused-variable] int i,j,n,cg0=0,ncg_home_old=-1; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec.c:31: ../../../src/mdlib/domdec.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec.c:31:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/domdec.c:41: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/domdec.c:44: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/domdec.c:1781:13: warning: 'dd_pmenodes' defined but not used [-Wunused-function] static int *dd_pmenodes(t_commrec *cr) ^ In file included from ../../../src/mdlib/calcvir.c:42:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/calcvir.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/calcvir.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/calcvir.c:47:13: warning: 'dprod1' defined but not used [-Wunused-function] static void dprod1(rvec vir,real x,rvec f) ^ ../../../src/mdlib/calcvir.c:160:13: warning: 'lo_fcv2' defined but not used [-Wunused-function] static void lo_fcv2(int i0,int i1, ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ebin.lo ../../../src/mdlib/ebin.c ../../../src/mdlib/constr.c: In function 'too_many_constraint_warnings': ../../../src/mdlib/constr.c:132:9: warning: unused variable 'abort' [-Wunused-variable] char *abort="- aborting to avoid logfile runaway.\n" ^ ../../../src/mdlib/constr.c: In function 'constrain': ../../../src/mdlib/constr.c:234:11: warning: unused variable 'ncons' [-Wunused-variable] int ncons,error; ^ ../../../src/mdlib/constr.c: In function 'init_constraints': ../../../src/mdlib/constr.c:772:37: warning: unused variable 'natoms' [-Wunused-variable] int ncon,nset,nmol,settle_type,i,natoms,mt,nflexcon; ^ ../../../src/mdlib/constr.c: In function 'inter_charge_group_constraints': ../../../src/mdlib/constr.c:903:8: warning: unused variable 'nat' [-Wunused-variable] int nat,*at2cg,cg,a,i; ^ In file included from ../../../src/mdlib/constr.c:42:0: ../../../src/mdlib/constr.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/constr.c:45: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/mdlib/constr.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/mdlib/constr.c:45: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/constr.c:53:0: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/mdlib/constr.c:110:12: warning: 'icomp' defined but not used [-Wunused-function] static int icomp(const void *p1, const void *p2) ^ ../../../src/mdlib/domdec_setup.c: In function 'guess_npme': ../../../src/mdlib/domdec_setup.c:83:13: warning: unused variable 'try' [-Wunused-variable] t_inputrec try; ^ ../../../src/mdlib/domdec_setup.c:82:16: warning: unused variable 'nky' [-Wunused-variable] int npme,nkx,nky,ndiv,*div,*mdiv,ldiv; ^ ../../../src/mdlib/domdec_setup.c:82:12: warning: unused variable 'nkx' [-Wunused-variable] int npme,nkx,nky,ndiv,*div,*mdiv,ldiv; ^ ../../../src/mdlib/domdec_setup.c: In function 'assign_factors': ../../../src/mdlib/domdec_setup.c:329:13: warning: unused variable 'z' [-Wunused-variable] int x,y,z,i; ^ ../../../src/mdlib/domdec_setup.c: In function 'dd_choose_grid': ../../../src/mdlib/domdec_setup.c:493:19: warning: unused variable 'nky' [-Wunused-variable] int npme,nkx,nky; ^ ../../../src/mdlib/domdec_setup.c:493:15: warning: unused variable 'nkx' [-Wunused-variable] int npme,nkx,nky; ^ ../../../src/mdlib/domdec_setup.c:493:10: warning: unused variable 'npme' [-Wunused-variable] int npme,nkx,nky; ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/domdec_setup.c:29: ../../../src/mdlib/domdec_setup.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_setup.c:32: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_setup.c:32:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/domdec_con.c: In function 'dd_make_local_vsites': ../../../src/mdlib/domdec_con.c:925:25: warning: unused variable 'gat' [-Wunused-variable] int ftype,nral,i,j,gat,a; ^ ../../../src/mdlib/coupling.c: In function 'berendsen_pcoupl': ../../../src/mdlib/domdec_con.c: In function 'init_domdec_vsites': ../../../src/mdlib/domdec_con.c:1047:31: warning: unused variable 'dc' [-Wunused-variable] gmx_domdec_constraints_t *dc; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_con.c:25: ../../../src/mdlib/domdec_con.c: At top level: ../../../src/mdlib/coupling.c:267:11: warning: unused variable 'ptr' [-Wunused-variable] char *ptr,buf[STRLEN]; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_top.c -fPIC -DPIC -o .libs/domdec_top.o ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_con.c:25:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/coupling.c:42: ../../../src/mdlib/coupling.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/update.h:49, from ../../../src/mdlib/coupling.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/update.h:49, from ../../../src/mdlib/coupling.c:42: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o edsam.lo ../../../src/mdlib/edsam.c ../../../src/mdlib/domdec_top.c: In function 'print_missing_interactions_mb': ../../../src/mdlib/domdec_top.c:113:56: warning: unused variable 'a_gl' [-Wunused-variable] int ftype,ftype_j,nral,i,j_mol,j,k,a0,a0_mol,mol,a,a_gl; ^ ../../../src/mdlib/domdec_top.c:113:38: warning: unused variable 'k' [-Wunused-variable] int ftype,ftype_j,nral,i,j_mol,j,k,a0,a0_mol,mol,a,a_gl; ^ ../../../src/mdlib/domdec_top.c: In function 'global_atomnr_to_moltype_ind': ../../../src/mdlib/domdec_top.c:349:7: warning: unused variable 'molb' [-Wunused-variable] int molb; ^ ../../../src/mdlib/domdec_top.c: In function 'count_excls': ../../../src/mdlib/domdec_top.c:364:11: warning: unused variable 'n_inter' [-Wunused-variable] int n,n_inter,cg,at0,at1,at,excl,atj; ^ ../../../src/mdlib/domdec_top.c: In function 'dd_make_reverse_top': ../../../src/mdlib/domdec_top.c:611:19: warning: unused variable 'n_recursive_vsite' [-Wunused-variable] int mb,natoms,n_recursive_vsite,nexcl,nexcl_icg,a; ^ ../../../src/mdlib/domdec_top.c: In function 'add_vsite': ../../../src/mdlib/domdec_top.c:760:37: warning: unused variable 'iatoms_r' [-Wunused-variable] t_iatom tiatoms[1+MAXATOMLIST],*iatoms_r; ^ ../../../src/mdlib/domdec_top.c: In function 'dd_make_local_top': ../../../src/mdlib/domdec_top.c:1408:10: warning: unused variable 'bUniqueExcl' [-Wunused-variable] bool bUniqueExcl,bRCheckMB,bRCheck2B,bRCheckExcl; ^ ../../../src/mdlib/domdec_top.c: In function 'check_link': ../../../src/mdlib/domdec_top.c:1590:12: warning: unused variable 'aj' [-Wunused-variable] int k,aj; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_top.c:31: ../../../src/mdlib/domdec_top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_top.c:31:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ebin.c -fPIC -DPIC -o .libs/ebin.o ../../../src/mdlib/ebin.c: In function 'add_ebin': ../../../src/mdlib/ebin.c:89:18: warning: unused variable 'sigma' [-Wunused-variable] double e,sum,sigma,invmm,diff; ^ ../../../src/mdlib/ebin.c:89:14: warning: unused variable 'sum' [-Wunused-variable] double e,sum,sigma,invmm,diff; ^ In file included from ../../../src/mdlib/ebin.c:50:0: ../../../src/mdlib/ebin.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ebin.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/edsam.c -fPIC -DPIC -o .libs/edsam.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ewald.lo ../../../src/mdlib/ewald.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fftgrid.lo ../../../src/mdlib/fftgrid.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o force.lo ../../../src/mdlib/force.c In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/edsam.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/edsam.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/edsam.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/edsam.c:316:13: warning: 'dump_xcoll' defined but not used [-Wunused-function] static void dump_xcoll(t_edpar *edi, struct t_do_edsam *buf, t_commrec *cr, int step) ^ ../../../src/mdlib/edsam.c:387:13: warning: 'dump_edi' defined but not used [-Wunused-function] static void dump_edi(t_edpar *edpars, t_commrec *cr, int nr_edi) ^ ../../../src/mdlib/edsam.c:439:13: warning: 'dump_rotmat' defined but not used [-Wunused-function] static void dump_rotmat(FILE* out,matrix rotmat) ^ ../../../src/mdlib/edsam.c:448:13: warning: 'dump_rvec' defined but not used [-Wunused-function] static void dump_rvec(FILE *out, int dim, rvec *x) ^ ../../../src/mdlib/edsam.c:459:13: warning: 'dump_mat' defined but not used [-Wunused-function] static void dump_mat(FILE* out, int dim, double** mat) ^ ../../../src/mdlib/edsam.c:964:13: warning: 'get_flood_enx_names' defined but not used [-Wunused-function] static void get_flood_enx_names(t_edpar *edi, char** names, int *nnames) /* get header of energies */ ^ ../../../src/mdlib/edsam.c:983:13: warning: 'get_flood_energies' defined but not used [-Wunused-function] static void get_flood_energies(t_edpar *edi, real Vfl[],int nnames) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ewald.c -fPIC -DPIC -o .libs/ewald.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ghat.lo ../../../src/mdlib/ghat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/fftgrid.c -fPIC -DPIC -o .libs/fftgrid.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/force.c -fPIC -DPIC -o .libs/force.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/ewald.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ewald.c:43:0: ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/ewald.c:44:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/fftgrid.c: In function 'mk_fftgrid': ../../../src/mdlib/fftgrid.c:97:25: warning: unused variable 'maxlocalsize' [-Wunused-variable] int x1,y1,maxlocalsize; ^ In file included from ../../../include/fftgrid.h:46:0, from ../../../src/mdlib/fftgrid.c:51: ../../../src/mdlib/fftgrid.c: At top level: ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/force.c: In function 'check_solvent_cg': ../../../src/mdlib/force.c:162:23: warning: unused variable 'excl' [-Wunused-variable] const t_blocka * excl; ^ ../../../src/mdlib/force.c: In function 'check_solvent': ../../../src/mdlib/force.c:406:23: warning: variable 'mols' set but not used [-Wunused-but-set-variable] const t_block * mols; ^ ../../../src/mdlib/force.c: In function 'set_avcsixtwelve': ../../../src/mdlib/force.c:687:46: warning: unused variable 'n' [-Wunused-variable] int mb,nmol,nmolc,i,j,tpi,tpj,j1,j2,k,n,nexcl,q; ^ ../../../src/mdlib/force.c: In function 'init_forcerec': ../../../src/mdlib/force.c:1048:16: warning: variable 'nbl' set but not used [-Wunused-but-set-variable] t_nblists *nbl; ^ ../../../src/mdlib/force.c:1043:26: warning: unused variable 'ngrp' [-Wunused-variable] int i,j,m,natoms,ngrp,negp_pp,negptable,egi,egj; ^ ../../../src/mdlib/force.c:1043:15: warning: unused variable 'j' [-Wunused-variable] int i,j,m,natoms,ngrp,negp_pp,negptable,egi,egj; ^ ../../../src/mdlib/force.c: In function 'do_force_lowlevel': ../../../src/mdlib/force.c:1549:20: warning: unused variable 'timesteps' [-Wunused-variable] static int timesteps=0; ^ ../../../src/mdlib/force.c:1548:32: warning: unused variable 't_wait' [-Wunused-variable] static double t_fnbf=0.0, t_wait=0.0; ^ ../../../src/mdlib/force.c:1548:20: warning: unused variable 't_fnbf' [-Wunused-variable] static double t_fnbf=0.0, t_wait=0.0; ^ ../../../src/mdlib/force.c:1540:13: warning: unused variable 'bDoEpot' [-Wunused-variable] bool bDoEpot,bSepDVDL,bSB; ^ ../../../src/mdlib/force.c:1539:15: warning: unused variable 'nit' [-Wunused-variable] int i,nit,status; ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/force.c:62: ../../../src/mdlib/force.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/mdlib/force.c:64: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/mdlib/force.c:64: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/force.c:69:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ghat.c -fPIC -DPIC -o .libs/ghat.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o init.lo ../../../src/mdlib/init.c In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/ghat.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ghat.c:44:0: ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/ghat.c:47: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdatom.lo ../../../src/mdlib/mdatom.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdebin.lo ../../../src/mdlib/mdebin.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/init.c -fPIC -DPIC -o .libs/init.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mdatom.c -fPIC -DPIC -o .libs/mdatom.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/init.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/init.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/init.c:51: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/init.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o minimize.lo ../../../src/mdlib/minimize.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mdebin.c -fPIC -DPIC -o .libs/mdebin.o ../../../src/mdlib/mdatom.c: In function 'init_mdatoms': ../../../src/mdlib/mdatom.c:56:12: warning: unused variable 'ilist' [-Wunused-variable] t_ilist *ilist; ^ ../../../src/mdlib/mdatom.c:51:17: warning: unused variable 'nmol' [-Wunused-variable] int mb,a,g,nmol; ^ ../../../src/mdlib/mdatom.c:51:15: warning: unused variable 'g' [-Wunused-variable] int mb,a,g,nmol; ^ ../../../src/mdlib/mdatom.c:51:10: warning: unused variable 'mb' [-Wunused-variable] int mb,a,g,nmol; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mvxvf.lo ../../../src/mdlib/mvxvf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/minimize.c -fPIC -DPIC -o .libs/minimize.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ns.lo ../../../src/mdlib/ns.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mvxvf.c -fPIC -DPIC -o .libs/mvxvf.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/mvxvf.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/mvxvf.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/mdebin.c: In function 'print_ebin': ../../../src/mdlib/mdebin.c:530:31: warning: unused variable 'nor' [-Wunused-variable] int i,j,n,ni,nj,ndr,nor; ^ ../../../src/mdlib/mdebin.c:530:27: warning: unused variable 'ndr' [-Wunused-variable] int i,j,n,ni,nj,ndr,nor; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/mdebin.c:48: ../../../src/mdlib/mdebin.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/mdebin.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/minimize.c: In function 'get_f_norm_max': ../../../src/mdlib/minimize.c:153:14: warning: unused variable 'fmax2_0' [-Wunused-variable] real fmax2,fmax2_0,fam; ^ ../../../src/mdlib/minimize.c: In function 'evaluate_energy': ../../../src/mdlib/minimize.c:573:12: warning: unused variable 'state' [-Wunused-variable] t_state *state; ^ ../../../src/mdlib/minimize.c: In function 'do_cg': ../../../src/mdlib/minimize.c:813:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate=0; ^ ../../../src/mdlib/minimize.c:798:26: warning: unused variable 'sum' [-Wunused-variable] double gpa,gpb,gpc,tmp,sum[2],minstep; ^ ../../../src/mdlib/minimize.c:797:28: warning: unused variable 'sfm' [-Wunused-variable] rvec *f_global,*p,*sf,*sfm; ^ ../../../src/mdlib/minimize.c: In function 'do_lbfgs': /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nsgrid.lo ../../../src/mdlib/nsgrid.c ../../../src/mdlib/minimize.c:1329:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate; ^ ../../../src/mdlib/minimize.c:1320:20: warning: variable 'first' set but not used [-Wunused-but-set-variable] bool converged,first; ^ ../../../src/mdlib/minimize.c: In function 'do_steep': ../../../src/mdlib/minimize.c:1957:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate=0; ^ ../../../src/mdlib/minimize.c:1946:16: warning: unused variable 'dvdlambda' [-Wunused-variable] real ustep,dvdlambda,fnormn; ^ ../../../src/mdlib/minimize.c:1945:19: warning: unused variable 'constepsize' [-Wunused-variable] real stepsize,constepsize; ^ ../../../src/mdlib/minimize.c: In function 'do_nm': ../../../src/mdlib/minimize.c:2163:22: warning: unused variable 'fmax' [-Wunused-variable] real fnorm,fmax; ^ ../../../src/mdlib/minimize.c:2163:16: warning: unused variable 'fnorm' [-Wunused-variable] real fnorm,fmax; ^ ../../../src/mdlib/minimize.c:2151:16: warning: unused variable 'nfmax' [-Wunused-variable] int nfmax,count; ^ ../../../src/mdlib/minimize.c:2149:16: warning: unused variable 'bNS' [-Wunused-variable] bool bNS; ^ ../../../src/mdlib/minimize.c:2148:18: warning: variable 'lambda' set but not used [-Wunused-but-set-variable] real t,lambda,t0,lam0; ^ ../../../src/mdlib/minimize.c: In function 'do_tpi': ../../../src/mdlib/minimize.c:2419:18: warning: unused variable 'end' [-Wunused-variable] int i,start,end; ^ ../../../src/mdlib/minimize.c:2419:12: warning: unused variable 'start' [-Wunused-variable] int i,start,end; ^ ../../../src/mdlib/minimize.c:2404:15: warning: unused variable 'TPI' [-Wunused-variable] const char *TPI="Test Particle Insertion"; ^ In file included from ../../../src/mdlib/minimize.c:47:0: ../../../src/mdlib/minimize.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/update.h:49, from ../../../src/mdlib/minimize.c:59: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/update.h:49, from ../../../src/mdlib/minimize.c:59: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/minimize.c:63: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/minimize.c:83: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/minimize.c:493:13: warning: 'do_x_step' defined but not used [-Wunused-function] static void do_x_step(t_commrec *cr,int n,rvec *x1,real a,rvec *f,rvec *x2) ^ ../../../src/mdlib/minimize.c:515:13: warning: 'do_x_sub' defined but not used [-Wunused-function] static void do_x_sub(t_commrec *cr,int n,rvec *x1,rvec *x2,real a,rvec *f) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ns.c -fPIC -DPIC -o .libs/ns.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o perf_est.lo ../../../src/mdlib/perf_est.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pme.lo ../../../src/mdlib/pme.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/nsgrid.c -fPIC -DPIC -o .libs/nsgrid.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/perf_est.c -fPIC -DPIC -o .libs/perf_est.o ../../../src/mdlib/nsgrid.c: In function 'init_grid': ../../../src/mdlib/nsgrid.c:181:10: warning: unused variable 'm' [-Wunused-variable] int d,m; ^ ../../../src/mdlib/nsgrid.c:181:8: warning: unused variable 'd' [-Wunused-variable] int d,m; ^ ../../../src/mdlib/nsgrid.c: In function 'grid_first': ../../../src/mdlib/nsgrid.c:278:10: warning: unused variable 'cx' [-Wunused-variable] ivec cx; ^ ../../../src/mdlib/nsgrid.c: In function 'fill_grid': ../../../src/mdlib/nsgrid.c:421:10: warning: variable 'nrx' set but not used [-Wunused-but-set-variable] int nrx,nry,nrz; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/nsgrid.c:47: ../../../src/mdlib/nsgrid.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/nsgrid.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/perf_est.c: In function 'n_bonded_dx': ../../../src/mdlib/perf_est.c:62:2: warning: label 'F_CONNBONDS' defined but not used [-Wunused-label] F_CONNBONDS: ndxb = 0; break; ^ ../../../src/mdlib/perf_est.c:61:2: warning: label 'F_POSRES' defined but not used [-Wunused-label] F_POSRES: ndxb = 1; break; ^ ../../../src/mdlib/perf_est.c: In function 'pme_load_estimate': ../../../src/mdlib/perf_est.c:89:21: warning: unused variable 'fljtab' [-Wunused-variable] float fq,fqlj,flj,fljtab,fqljw,fqw,fqspread,ffft,fbond; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/perf_est.c:41: ../../../src/mdlib/perf_est.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/perf_est.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/ns.c: In function 'new_i_nblist': ../../../src/mdlib/ns.c:394:20: warning: unused variable 'nshift' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c:394:14: warning: unused variable 'k' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c:394:12: warning: unused variable 'i' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c: In function 'put_in_list': ../../../src/mdlib/ns.c:546:25: warning: unused variable 'rlj' [-Wunused-variable] real qi,qiB,qq,rlj; ^ ../../../src/mdlib/ns.c:546:22: warning: unused variable 'qq' [-Wunused-variable] real qi,qiB,qq,rlj; ^ ../../../src/mdlib/ns.c:541:23: warning: unused variable 'len' [-Wunused-variable] int i0,nicg,len; ^ ../../../src/mdlib/ns.c:539:39: warning: unused variable 'ind_ij' [-Wunused-variable] int i,j,jcg,igid,gid,nbl_ind,ind_ij; ^ ../../../src/mdlib/ns.c: In function 'ns_inner_tric': ../../../src/mdlib/ns.c:1283:15: warning: unused variable 'nsbuf' [-Wunused-variable] t_ns_buf *nsbuf; ^ ../../../src/mdlib/ns.c: In function 'ns_inner_rect': ../../../src/mdlib/ns.c:1314:15: warning: unused variable 'nsbuf' [-Wunused-variable] t_ns_buf *nsbuf; ^ ../../../src/mdlib/ns.c: In function 'ns_simple_core': ../../../src/mdlib/ns.c:1365:38: warning: unused variable 'nri' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c:1365:35: warning: unused variable 'i0' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c:1365:26: warning: unused variable 'jcg' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c: In function 'nsgrid_core': ../../../src/mdlib/ns.c:1674:58: warning: unused variable 'dcz' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1674:54: warning: unused variable 'dcy' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1674:50: warning: unused variable 'dcx' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1673:13: warning: unused variable 'xi' [-Wunused-variable] rvec xi,*cgcm,grid_offset; ^ ../../../src/mdlib/ns.c:1669:42: warning: unused variable 'nri' [-Wunused-variable] int cg0,cg1,icg=-1,cgsnr,i0,igid,nri,naaj,max_jcg; ^ ../../../src/mdlib/ns.c:1666:45: warning: variable 'grid_z' set but not used [-Wunused-but-set-variable] real gridx,gridy,gridz,grid_x,grid_y,grid_z; ^ ../../../src/mdlib/ns.c: In function 'init_ns': ../../../src/mdlib/ns.c:2177:11: warning: unused variable 'ptr' [-Wunused-variable] char *ptr; ^ ../../../src/mdlib/ns.c: In function 'search_neighbours': ../../../src/mdlib/ns.c:2280:23: warning: unused variable 'cg_end' [-Wunused-variable] int cg_start,cg_end,start,end; ^ ../../../src/mdlib/ns.c:2280:14: warning: unused variable 'cg_start' [-Wunused-variable] int cg_start,cg_end,start,end; ^ ../../../src/mdlib/ns.c:2279:15: warning: unused variable 'i_egp_flags' [-Wunused-variable] bool *i_egp_flags; ^ ../../../src/mdlib/ns.c:2278:15: warning: unused variable 'ptr' [-Wunused-variable] char *ptr; ^ ../../../src/mdlib/ns.c:2274:16: warning: unused variable 'j' [-Wunused-variable] int i,j,m,ngid; ^ ../../../src/mdlib/ns.c:2274:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,ngid; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pme.c -fPIC -DPIC -o .libs/pme.o In file included from ../../../src/mdlib/ns.c:50:0: ../../../src/mdlib/ns.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ns.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/ns.c:54:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pme_pp.lo ../../../src/mdlib/pme_pp.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pme_pp.c -fPIC -DPIC -o .libs/pme_pp.o ../../../src/mdlib/pme.c: In function 'pmeredist': ../../../src/mdlib/pme.c:380:12: warning: unused variable 'ii' [-Wunused-variable] int i, ii; ^ ../../../src/mdlib/pme.c:380:9: warning: unused variable 'i' [-Wunused-variable] int i, ii; ^ ../../../src/mdlib/pme.c:379:10: warning: variable 'idxa' set but not used [-Wunused-but-set-variable] int *idxa; ^ ../../../src/mdlib/pme.c: In function 'gmx_sum_qgrid_dd': ../../../src/mdlib/pme.c:660:18: warning: unused variable 'to' [-Wunused-variable] real *from, *to; ^ ../../../src/mdlib/pme.c:660:11: warning: unused variable 'from' [-Wunused-variable] real *from, *to; ^ ../../../src/mdlib/pme.c:659:22: warning: unused variable 'pgc' [-Wunused-variable] pme_grid_comm_t *pgc; ^ ../../../src/mdlib/pme.c:658:15: warning: unused variable 'localsize' [-Wunused-variable] int la12r,localsize; ^ ../../../src/mdlib/pme.c:658:9: warning: unused variable 'la12r' [-Wunused-variable] int la12r,localsize; ^ ../../../src/mdlib/pme.c:657:11: warning: unused variable 'i' [-Wunused-variable] int b,i; ^ ../../../src/mdlib/pme.c:657:9: warning: unused variable 'b' [-Wunused-variable] int b,i; ^ ../../../src/mdlib/pme.c:656:18: warning: unused variable 'tmp' [-Wunused-variable] static real *tmp=NULL; ^ ../../../src/mdlib/pme.c: In function 'gmx_sum_qgrid': ../../../src/mdlib/pme.c:756:16: warning: unused variable 'maxproc' [-Wunused-variable] static int maxproc; ^ ../../../src/mdlib/pme.c:755:16: warning: unused variable 'localsize' [-Wunused-variable] static int localsize; ^ ../../../src/mdlib/pme.c:754:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/mdlib/pme.c:753:18: warning: unused variable 'tmp' [-Wunused-variable] static real *tmp; ^ ../../../src/mdlib/pme.c:752:17: warning: unused variable 'bFirst' [-Wunused-variable] static bool bFirst=TRUE; ^ ../../../src/mdlib/pme.c: In function 'spread_q_bsplines': ../../../src/mdlib/pme.c:840:20: warning: unused variable 'bndsize' [-Wunused-variable] int localsize, bndsize; ^ ../../../src/mdlib/pme.c:840:9: warning: unused variable 'localsize' [-Wunused-variable] int localsize, bndsize; ^ ../../../src/mdlib/pme.c:835:16: warning: unused variable 'i' [-Wunused-variable] int b,i,nn,n,*i0,*j0,*k0,*ii0,*jj0,*kk0,ithx,ithy,ithz; ^ ../../../src/mdlib/pme.c:835:14: warning: unused variable 'b' [-Wunused-variable] int b,i,nn,n,*i0,*j0,*k0,*ii0,*jj0,*kk0,ithx,ithy,ithz; ^ ../../../src/mdlib/pme.c:834:20: warning: unused variable 'ol' [-Wunused-variable] pme_overlap_t *ol; ^ ../../../src/mdlib/pme.c: In function 'init_atomcomm': ../../../src/mdlib/pme.c:1441:22: warning: unused variable 'pgc' [-Wunused-variable] pme_grid_comm_t *pgc; ^ ../../../src/mdlib/pme.c:1440:12: warning: unused variable 'nk' [-Wunused-variable] int nn,nk; ^ ../../../src/mdlib/pme.c:1440:9: warning: unused variable 'nn' [-Wunused-variable] int nn,nk; ^ ../../../src/mdlib/pme.c:1439:27: warning: unused variable 'i' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:25: warning: unused variable 'b' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:19: warning: unused variable 'maxlr' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:14: warning: unused variable 'rbnd' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:9: warning: unused variable 'lbnd' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c: In function 'gmx_pme_init': ../../../src/mdlib/pme.c:1541:25: warning: unused variable 'maxlr' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:20: warning: unused variable 'rbnd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:15: warning: unused variable 'lbnd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:11: warning: unused variable 'd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:9: warning: unused variable 'b' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pme.c:70: ../../../src/mdlib/pme.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pme.c:70:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/pme.c:71:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../src/mdlib/pme.c:81:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/pme.c:198:13: warning: 'pr_grid_dist' defined but not used [-Wunused-function] static void pr_grid_dist(FILE *fp,char *title,t_fftgrid *grid) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pppm.lo ../../../src/mdlib/pppm.c ../../../src/mdlib/pme_pp.c: In function 'gmx_pme_pp_init': ../../../src/mdlib/pme_pp.c:112:7: warning: unused variable 'rank' [-Wunused-variable] int rank; ^ ../../../src/mdlib/pme_pp.c: In function 'gmx_pme_recv_q_x': ../../../src/mdlib/pme_pp.c:261:9: warning: unused variable 'charge_pp' [-Wunused-variable] real *charge_pp; ^ ../../../src/mdlib/pme_pp.c:260:25: warning: unused variable 'sender' [-Wunused-variable] int nat=0,q,messages,sender; ^ ../../../src/mdlib/pme_pp.c:260:16: warning: variable 'messages' set but not used [-Wunused-but-set-variable] int nat=0,q,messages,sender; ^ ../../../src/mdlib/pme_pp.c:260:14: warning: unused variable 'q' [-Wunused-variable] int nat=0,q,messages,sender; ^ ../../../src/mdlib/pme_pp.c: In function 'gmx_pme_send_force_vir_ener': ../../../src/mdlib/pme_pp.c:446:7: warning: variable 'messages' set but not used [-Wunused-but-set-variable] int messages,ind_start,ind_end,receiver; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pme_pp.c:48: ../../../src/mdlib/pme_pp.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pme_pp.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/pme_pp.c:49: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/pme_pp.c:133:13: warning: 'gmx_pme_send_q_x_wait' defined but not used [-Wunused-function] static void gmx_pme_send_q_x_wait(gmx_domdec_t *dd) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pppm.c -fPIC -DPIC -o .libs/pppm.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o partdec.lo ../../../src/mdlib/partdec.c ../../../src/mdlib/pppm.c: In function 'convolution': ../../../src/mdlib/pppm.c:384:14: warning: unused variable 'jend' [-Wunused-variable] int jstart,jend; ^ ../../../src/mdlib/pppm.c:384:7: warning: unused variable 'jstart' [-Wunused-variable] int jstart,jend; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pppm.c:45: ../../../src/mdlib/pppm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pppm.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/pppm.c:51: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/pppm.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/pppm.c:616:12: warning: 'gmx_pppm_opt_do' defined but not used [-Wunused-function] static int gmx_pppm_opt_do(FILE *log, gmx_pme_t pme, ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/partdec.c -fPIC -DPIC -o .libs/partdec.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pull.lo ../../../src/mdlib/pull.c ../../../src/mdlib/partdec.c: In function 'pr_idef_division': ../../../src/mdlib/partdec.c:343:15: warning: variable 'nr' set but not used [-Wunused-but-set-variable] int i,ftype,nr,nra,m0,m1; ^ ../../../src/mdlib/partdec.c: In function 'create_vsitelist': ../../../src/mdlib/partdec.c:477:7: warning: unused variable 'minidx' [-Wunused-variable] int minidx; ^ ../../../src/mdlib/partdec.c: In function 'setup_parallel_vsites': ../../../src/mdlib/partdec.c:511:15: warning: unused variable 'k' [-Wunused-variable] int i,inr,j,k,ftype; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pull.c -fPIC -DPIC -o .libs/pull.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pullutil.lo ../../../src/mdlib/pullutil.c ../../../src/mdlib/pull.c: In function 'apply_forces_grp': ../../../src/mdlib/pull.c:155:20: warning: variable 'end' set but not used [-Wunused-but-set-variable] int i,ii,m,start,end; ^ ../../../src/mdlib/pull.c: In function 'do_constraint': ../../../src/mdlib/pull.c:283:22: warning: unused variable 'mass' [-Wunused-variable] double lambda, rm, mass, invdt=0; ^ ../../../src/mdlib/pull.c:282:10: warning: unused variable 'd0' [-Wunused-variable] double d0,inpr; ^ ../../../src/mdlib/pull.c: In function 'init_pull_group_index': ../../../src/mdlib/pull.c:779:16: warning: variable 'ga2la' set but not used [-Wunused-but-set-variable] gmx_ga2la_t *ga2la=NULL; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/pull.c:46: ../../../src/mdlib/pull.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pull.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pull.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/pull.c:60: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pullutil.c -fPIC -DPIC -o .libs/pullutil.o ../../../src/mdlib/pullutil.c: In function 'pull_set_pbcatom': ../../../src/mdlib/pullutil.c:85:9: warning: unused variable 'm' [-Wunused-variable] int a,m; ^ ../../../src/mdlib/pullutil.c: In function 'pull_calc_coms': ../../../src/mdlib/pullutil.c:278:9: warning: unused variable 'xx' [-Wunused-variable] rvec *xx[2],x_pbc={0,0,0},dx; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/pullutil.c:45: ../../../src/mdlib/pullutil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pullutil.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pullutil.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rf_util.lo ../../../src/mdlib/rf_util.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/rf_util.c -fPIC -DPIC -o .libs/rf_util.o ../../../src/mdlib/rf_util.c: In function 'RF_excl_correction': ../../../src/mdlib/rf_util.c:59:10: warning: unused variable 'top' [-Wunused-variable] int top,i,j,j1,j2,k,ki; ^ In file included from ../../../src/mdlib/rf_util.c:42:0: ../../../src/mdlib/rf_util.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/rf_util.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/rf_util.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/rf_util.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shakef.lo ../../../src/mdlib/shakef.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sim_util.lo ../../../src/mdlib/sim_util.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/shakef.c -fPIC -DPIC -o .libs/shakef.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shellfc.lo ../../../src/mdlib/shellfc.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o stat.lo ../../../src/mdlib/stat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/sim_util.c -fPIC -DPIC -o .libs/sim_util.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/shellfc.c -fPIC -DPIC -o .libs/shellfc.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/stat.c -fPIC -DPIC -o .libs/stat.o ../../../src/mdlib/shakef.c: In function 'cshake': ../../../src/mdlib/shakef.c:79:19: warning: unused variable 'tjz' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:79:15: warning: unused variable 'tjy' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:79:11: warning: unused variable 'tjx' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:78:19: warning: unused variable 'tiz' [-Wunused-variable] real tix,tiy,tiz; ^ ../../../src/mdlib/shakef.c:78:15: warning: unused variable 'tiy' [-Wunused-variable] real tix,tiy,tiz; ^ ../../../src/mdlib/shakef.c:78:11: warning: unused variable 'tix' [-Wunused-variable] real tix,tiy,tiz; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/shakef.c:46: ../../../src/mdlib/shakef.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/shakef.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/shakef.c:51:13: warning: 'pv' defined but not used [-Wunused-function] static void pv(FILE *log,char *s,rvec x) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/stat.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/stat.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/stat.c:53:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/stat.c:63: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tables.lo ../../../src/mdlib/tables.c ../../../src/mdlib/sim_util.c: In function 'calc_virial': ../../../src/mdlib/sim_util.c:250:10: warning: unused variable 'virtest' [-Wunused-variable] tensor virtest; ^ ../../../src/mdlib/shellfc.c: In function 'predict_shells': ../../../src/mdlib/sim_util.c:249:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/mdlib/shellfc.c:115:18: warning: unused variable 'dt_3' [-Wunused-variable] real dt_1,dt_2,dt_3,fudge,tm,m1,m2,m3; ^ ../../../src/mdlib/shellfc.c:115:13: warning: unused variable 'dt_2' [-Wunused-variable] real dt_1,dt_2,dt_3,fudge,tm,m1,m2,m3; ^ ../../../src/mdlib/shellfc.c: In function 'init_shell_flexcon': ../../../src/mdlib/shellfc.c:197:32: warning: unused variable 'mt' [-Wunused-variable] int i,j,nmol,type,mb,mt,a_offset,cg,mol,ftype,nra; ^ ../../../src/mdlib/shellfc.c:197:19: warning: unused variable 'nmol' [-Wunused-variable] int i,j,nmol,type,mb,mt,a_offset,cg,mol,ftype,nra; ^ ../../../src/mdlib/sim_util.c: In function 'do_force': ../../../src/mdlib/sim_util.c:357:24: warning: unused variable 'cycles_pme' [-Wunused-variable] float cycles_ppdpme,cycles_pme,cycles_force; ^ ../../../src/mdlib/sim_util.c:355:10: warning: unused variable 'e' [-Wunused-variable] real e,v,dvdl; ^ ../../../src/mdlib/sim_util.c:354:10: warning: unused variable 'boxs' [-Wunused-variable] matrix boxs; ^ ../../../src/mdlib/sim_util.c:353:57: warning: unused variable 'bBS' [-Wunused-variable] bool bSepDVDL,bStateChanged,bNS,bFillGrid,bCalcCGCM,bBS,bDoForces; ^ ../../../src/mdlib/sim_util.c:348:15: warning: unused variable 'box_size' [-Wunused-variable] static rvec box_size; ^ ../../../src/mdlib/shellfc.c: In function 'init_adir': ../../../src/mdlib/sim_util.c: In function 'calc_enervirdiff': ../../../src/mdlib/shellfc.c:694:12: warning: unused variable 'dx' [-Wunused-variable] rvec p,dx; ^ ../../../src/mdlib/shellfc.c:694:10: warning: unused variable 'p' [-Wunused-variable] rvec p,dx; ^ ../../../src/mdlib/shellfc.c:691:13: warning: unused variable 'scale' [-Wunused-variable] real dt,scale; ^ ../../../src/mdlib/shellfc.c:690:16: warning: unused variable 'gt' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c:690:13: warning: unused variable 'ga' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c:690:10: warning: unused variable 'gf' [-Wunused-variable] int gf,ga,gt; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tgroup.lo ../../../src/mdlib/tgroup.c ../../../src/mdlib/sim_util.c:823:13: warning: variable 'r1' set but not used [-Wunused-but-set-variable] double r0,r1,r,rc3,rc9,ea,eb,ec,pa,pb,pc,pd; ^ ../../../src/mdlib/shellfc.c: In function 'relax_shell_flexcon': ../../../src/mdlib/sim_util.c: In function 'init_md': ../../../src/mdlib/shellfc.c:776:19: warning: unused variable 'g' [-Wunused-variable] int nflexcon,g,number_steps,d,Min=0,count=0; ^ ../../../src/mdlib/shellfc.c:772:10: warning: unused variable 'cbuf' [-Wunused-variable] char cbuf[56]; ^ ../../../src/mdlib/shellfc.c:771:19: warning: unused variable 'xiS' [-Wunused-variable] real ftol,xiH,xiS,dum=0; ^ ../../../src/mdlib/shellfc.c:771:15: warning: unused variable 'xiH' [-Wunused-variable] real ftol,xiH,xiS,dum=0; ^ ../../../src/mdlib/shellfc.c:769:10: warning: unused variable 'dx' [-Wunused-variable] rvec dx; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/shellfc.c:43: ../../../src/mdlib/shellfc.c: At top level: ../../../src/mdlib/sim_util.c:1222:13: warning: unused variable 'mod' [-Wunused-variable] real tmpt,mod; ^ ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ ../../../src/mdlib/sim_util.c:1222:8: warning: unused variable 'tmpt' [-Wunused-variable] real tmpt,mod; ^ In file included from ../../../src/mdlib/shellfc.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../src/mdlib/sim_util.c:1221:12: warning: unused variable 'n' [-Wunused-variable] int i,j,n; ^ ../../../src/mdlib/sim_util.c:1221:10: warning: unused variable 'j' [-Wunused-variable] int i,j,n; ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/sim_util.c:57: ../../../src/mdlib/sim_util.c: At top level: ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/shellfc.c:45: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/shellfc.c:55:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/sim_util.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/sim_util.c:68: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../src/mdlib/sim_util.c:78:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/tables.c -fPIC -DPIC -o .libs/tables.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/tgroup.c -fPIC -DPIC -o .libs/tgroup.o ../../../src/mdlib/tables.c: In function 'done_tabledata': ../../../src/mdlib/tables.c:470:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/mdlib/tables.c: In function 'make_tables': ../../../src/mdlib/tables.c:835:17: warning: unused variable 'j' [-Wunused-variable] int i,j,k,nx,nx0,tabsel[etiNR]; ^ ../../../src/mdlib/tables.c: In function 'make_bonded_table': ../../../src/mdlib/tables.c:950:10: warning: variable 'start' set but not used [-Wunused-but-set-variable] double start; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/tables.c:47: ../../../src/mdlib/tables.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/tables.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/tables.c:51:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/tables.c:155:13: warning: 'splint' defined but not used [-Wunused-function] static void splint(real xa[],real ya[],real y2a[], ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o update.lo ../../../src/mdlib/update.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/update.c -fPIC -DPIC -o .libs/update.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vcm.lo ../../../src/mdlib/vcm.c ../../../src/mdlib/tgroup.c: In function 'init_grptcstat': ../../../src/mdlib/tgroup.c:57:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/tgroup.c:48: ../../../src/mdlib/tgroup.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/tgroup.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/tgroup.c:51: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/tgroup.c:141:13: warning: 'accumulate_ekin' defined but not used [-Wunused-function] static void accumulate_ekin(t_commrec *cr,t_grpopts *opts, ^ ../../../src/mdlib/update.c: In function 'update': ../../../src/mdlib/update.c:771:39: warning: unused variable 'g' [-Wunused-variable] int start,homenr,i,n,m,g; ^ ../../../src/mdlib/update.c:770:20: warning: variable 'dt_1' set but not used [-Wunused-but-set-variable] real dt_1; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/update.c:50: ../../../src/mdlib/update.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/update.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/update.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/update.c:62:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/vcm.c -fPIC -DPIC -o .libs/vcm.o ../../../src/mdlib/vcm.c: In function 'calc_vcm_grp': ../../../src/mdlib/vcm.c:122:28: warning: unused variable 'zz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:25: warning: unused variable 'yz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:22: warning: unused variable 'yy' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:19: warning: unused variable 'xz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:16: warning: unused variable 'xy' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:13: warning: unused variable 'xx' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c: In function 'do_stopcm_grp': ../../../src/mdlib/vcm.c:171:11: warning: unused variable 'tm_1' [-Wunused-variable] real tm,tm_1; ^ ../../../src/mdlib/vcm.c:171:8: warning: unused variable 'tm' [-Wunused-variable] real tm,tm_1; ^ ../../../src/mdlib/vcm.c:170:12: warning: unused variable 'm' [-Wunused-variable] int i,g,m; ^ ../../../src/mdlib/vcm.c: In function 'check_cm_grp': ../../../src/mdlib/vcm.c:250:14: warning: unused variable 'Tcm' [-Wunused-variable] tensor Icm,Tcm; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/vcm.c:43: ../../../src/mdlib/vcm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/vcm.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vsite.lo ../../../src/mdlib/vsite.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wall.lo ../../../src/mdlib/wall.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/vsite.c -fPIC -DPIC -o .libs/vsite.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/wall.c -fPIC -DPIC -o .libs/wall.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wnblist.lo ../../../src/mdlib/wnblist.c ../../../src/mdlib/vsite.c: In function 'constr_vsiten': ../../../src/mdlib/vsite.c:437:8: warning: unused variable 'xs' [-Wunused-variable] rvec xs,x1,dx; ^ ../../../src/mdlib/vsite.c: In function 'construct_vsites': ../../../src/mdlib/vsite.c:484:25: warning: unused variable 'rtmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:484:20: warning: unused variable 'vtmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:484:13: warning: unused variable 'reftmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:478:19: warning: unused variable 'ii' [-Wunused-variable] int i,inc,ii,nra,nr,tp,ftype; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite2': ../../../src/mdlib/vsite.c:655:11: warning: unused variable 'b' [-Wunused-variable] real b; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite3FD': ../../../src/mdlib/vsite.c:770:23: warning: unused variable 'd' [-Wunused-variable] int svi,sji,skj,d; ^ ../../../src/mdlib/vsite.c:767:14: warning: unused variable 'fz' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c:767:11: warning: unused variable 'fy' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c:767:8: warning: unused variable 'fx' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite_f': ../../../src/mdlib/vsite.c:1255:19: warning: unused variable 'm' [-Wunused-variable] int i,inc,m,nra,nr,tp,ftype; ^ ../../../src/mdlib/vsite.c: In function 'count_intercg_vsite': ../../../src/mdlib/vsite.c:1409:11: warning: unused variable 'mt' [-Wunused-variable] int mb,mt,ftype,nral,i,cg,a; ^ ../../../src/mdlib/vsite.c: In function 'get_vsite_pbc': ../../../src/mdlib/vsite.c:1448:38: warning: unused variable 'cg_c' [-Wunused-variable] int ftype,nral,i,j,vsi,vsite,cg_v,cg_c,a,nc3=0; ^ ../../../src/mdlib/vsite.c: In function 'init_vsite': ../../../src/mdlib/vsite.c:1559:13: warning: unused variable 'cg' [-Wunused-variable] int *a2cg,cg; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/vsite.c:46: ../../../src/mdlib/vsite.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/vsite.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o csettle.lo ../../../src/mdlib/csettle.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o clincs.lo ../../../src/mdlib/clincs.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/wnblist.c -fPIC -DPIC -o .libs/wnblist.o ../../../src/mdlib/wall.c: In function 'do_walls': ../../../src/mdlib/wall.c:107:47: warning: unused variable 'Heps' [-Wunused-variable] real tabscale,*VFtab,rt,eps,eps2,Yt,Ft,Geps,Heps,Heps2,Fp,VV,FF; ^ ../../../src/mdlib/wall.c:103:50: warning: variable 'Fwall' set but not used [-Wunused-but-set-variable] real *nbfp,lamfac,fac_d[2],fac_r[2],Cd,Cr,Vtot,Fwall[2]; ^ In file included from ../../../src/mdlib/wall.c:45:0: ../../../src/mdlib/wall.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/wall.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/wall.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/csettle.c -fPIC -DPIC -o .libs/csettle.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/clincs.c -fPIC -DPIC -o .libs/clincs.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o qmmm.lo ../../../src/mdlib/qmmm.c ../../../src/mdlib/csettle.c: In function 'xshake': ../../../src/mdlib/csettle.c:183:39: warning: unused variable 'conv' [-Wunused-variable] int i,ll,ii,jj,l3,ix,iy,iz,jx,jy,jz,conv; ^ ../../../src/mdlib/csettle.c: In function 'csettle': ../../../src/mdlib/csettle.c:298:10: warning: unused variable 'shakeret' [-Wunused-variable] int i, shakeret, ow1, hw2, hw3; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/csettle.c:42: ../../../src/mdlib/csettle.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/csettle.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/wnblist.c: In function 'read_nblist': ../../../src/mdlib/wnblist.c:135:27: warning: unused variable 'icmp' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:135:22: warning: unused variable 'full' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:135:17: warning: unused variable 'nnbl' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:134:26: warning: unused variable 'b2' [-Wunused-variable] char buf[256],b1[32],b2[32],solv[256],il_code[256]; ^ ../../../src/mdlib/wnblist.c:134:19: warning: unused variable 'b1' [-Wunused-variable] char buf[256],b1[32],b2[32],solv[256],il_code[256]; ^ ../../../src/mdlib/wnblist.c:133:10: warning: unused variable 'bNL' [-Wunused-variable] bool bNL; ^ In file included from ../../../src/mdlib/wnblist.c:44:0: ../../../src/mdlib/wnblist.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/clincs.c: In function 'do_lincsp': ../../../src/mdlib/clincs.c:189:54: warning: unused variable 'lam' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:49: warning: unused variable 'wfac' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:45: warning: unused variable 'len' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:40: warning: unused variable 'rlen' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c: In function 'set_lincs': ../../../src/mdlib/clincs.c:764:14: warning: variable 'bLocal' set but not used [-Wunused-but-set-variable] bool bLocal; ^ ../../../src/mdlib/clincs.c: In function 'constrain_lincs': ../../../src/mdlib/clincs.c:1084:25: warning: unused variable 'error' [-Wunused-variable] int i,warn,p_imax,error; ^ In file included from ../../../src/mdlib/clincs.c:45:0: ../../../src/mdlib/clincs.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/clincs.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/clincs.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/clincs.c:50: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/clincs.c:1034:13: warning: 'dump_conf' defined but not used [-Wunused-function] static void dump_conf(gmx_domdec_t *dd,struct gmx_lincsdata *li, ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/qmmm.c -fPIC -DPIC -o .libs/qmmm.o ../../../src/mdlib/qmmm.c: In function 'update_QMMMrec': ../../../src/mdlib/qmmm.c:725:6: warning: unused variable 'MMatoms' [-Wunused-variable] *MMatoms; ^ ../../../src/mdlib/qmmm.c:721:17: warning: variable 'QMMMlist_lr' set but not used [-Wunused-but-set-variable] QMMMlist_sr,QMMMlist_lr; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/qmmm.c:48: ../../../src/mdlib/qmmm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/qmmm.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/qmmm.c:49:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/qmmm.c:60:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/qmmm.c:131:12: warning: 'int_comp' defined but not used [-Wunused-function] static int int_comp(const void *a,const void *b){ ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fft.lo ../../../src/mdlib/gmx_fft.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_parallel_3dfft.lo ../../../src/mdlib/gmx_parallel_3dfft.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wallcycle.lo ../../../src/mdlib/gmx_wallcycle.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o qm_gaussian.lo ../../../src/mdlib/qm_gaussian.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_fft.c -fPIC -DPIC -o .libs/gmx_fft.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_parallel_3dfft.c -fPIC -DPIC -o .libs/gmx_parallel_3dfft.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fft_fftw3.lo ../../../src/mdlib/gmx_fft_fftw3.c In file included from ../../../src/mdlib/gmx_fft.c:30:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_wallcycle.c -fPIC -DPIC -o .libs/gmx_wallcycle.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/qm_gaussian.c -fPIC -DPIC -o .libs/qm_gaussian.o ../../../src/mdlib/gmx_wallcycle.c: In function 'wallcycle_sum': ../../../src/mdlib/gmx_wallcycle.c:163:31: warning: unused variable 'buf_all' [-Wunused-variable] double buf[ewcNR],*cyc_all,*buf_all; ^ ../../../src/mdlib/gmx_wallcycle.c:163:22: warning: unused variable 'cyc_all' [-Wunused-variable] double buf[ewcNR],*cyc_all,*buf_all; ^ ../../../src/mdlib/gmx_wallcycle.c:163:10: warning: unused variable 'buf' [-Wunused-variable] double buf[ewcNR],*cyc_all,*buf_all; ^ ../../../src/mdlib/gmx_wallcycle.c: At top level: ../../../src/mdlib/gmx_wallcycle.c:59:26: warning: 'wc_barrier' defined but not used [-Wunused-variable] static bool wc_barrier=FALSE; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_fft_fftw3.c -fPIC -DPIC -o .libs/gmx_fft_fftw3.o ../../../src/mdlib/qm_gaussian.c: In function 'init_gaussian': ../../../src/mdlib/qm_gaussian.c:73:6: warning: unused variable 'rffile' [-Wunused-variable] *rffile=NULL,*out=NULL; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/qm_gaussian.c:48: ../../../src/mdlib/qm_gaussian.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/qm_gaussian.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/qm_gaussian.c:49:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/qm_gaussian.c:60:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/mdlib/gmx_fft_fftw3.c:27: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libmd_d.la -rpath /usr/lib64 calcmu.lo calcvir.lo constr.lo coupling.lo domdec.lo domdec_con.lo domdec_network.lo domdec_setup.lo domdec_top.lo ebin.lo edsam.lo ewald.lo fftgrid.lo force.lo ghat.lo init.lo mdatom.lo mdebin.lo minimize.lo mvxvf.lo ns.lo nsgrid.lo perf_est.lo pme.lo pme_pp.lo pppm.lo partdec.lo pull.lo pullutil.lo rf_util.lo shakef.lo sim_util.lo shellfc.lo stat.lo tables.lo tgroup.lo update.lo vcm.lo vsite.lo wall.lo wnblist.lo csettle.lo clincs.lo qmmm.lo gmx_fft.lo gmx_parallel_3dfft.lo gmx_wallcycle.lo qm_gaussian.lo gmx_fft_fftw3.lo ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath x86_64-alt-linux-gcc -shared .libs/calcmu.o .libs/calcvir.o .libs/constr.o .libs/coupling.o .libs/domdec.o .libs/domdec_con.o .libs/domdec_network.o .libs/domdec_setup.o .libs/domdec_top.o .libs/ebin.o .libs/edsam.o .libs/ewald.o .libs/fftgrid.o .libs/force.o .libs/ghat.o .libs/init.o .libs/mdatom.o .libs/mdebin.o .libs/minimize.o .libs/mvxvf.o .libs/ns.o .libs/nsgrid.o .libs/perf_est.o .libs/pme.o .libs/pme_pp.o .libs/pppm.o .libs/partdec.o .libs/pull.o .libs/pullutil.o .libs/rf_util.o .libs/shakef.o .libs/sim_util.o .libs/shellfc.o .libs/stat.o .libs/tables.o .libs/tgroup.o .libs/update.o .libs/vcm.o .libs/vsite.o .libs/wall.o .libs/wnblist.o .libs/csettle.o .libs/clincs.o .libs/qmmm.o .libs/gmx_fft.o .libs/gmx_parallel_3dfft.o .libs/gmx_wallcycle.o .libs/qm_gaussian.o .libs/gmx_fft_fftw3.o -lgslcblas ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libmd_d.so.5 -o .libs/libmd_d.so.5.0.0 (cd .libs && rm -f libmd_d.so.5 && ln -s libmd_d.so.5.0.0 libmd_d.so.5) (cd .libs && rm -f libmd_d.so && ln -s libmd_d.so.5.0.0 libmd_d.so) creating libmd_d.la (cd .libs && rm -f libmd_d.la && ln -s ../libmd_d.la libmd_d.la) make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib' Making all in kernel make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/kernel' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o add_par.lo ../../../src/kernel/add_par.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o compute_io.lo ../../../src/kernel/compute_io.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o convparm.lo ../../../src/kernel/convparm.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gen_ad.lo ../../../src/kernel/gen_ad.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gen_vsite.lo ../../../src/kernel/gen_vsite.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genhydro.lo ../../../src/kernel/genhydro.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxcpp.lo ../../../src/kernel/gmxcpp.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gpp_atomtype.lo ../../../src/kernel/gpp_atomtype.c mkdir .libs x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/compute_io.c -fPIC -DPIC -o .libs/compute_io.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gen_vsite.c -fPIC -DPIC -o .libs/gen_vsite.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/convparm.c -fPIC -DPIC -o .libs/convparm.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gen_ad.c -fPIC -DPIC -o .libs/gen_ad.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/add_par.c -fPIC -DPIC -o .libs/add_par.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gpp_atomtype.c -fPIC -DPIC -o .libs/gpp_atomtype.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/genhydro.c -fPIC -DPIC -o .libs/genhydro.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gmxcpp.c -fPIC -DPIC -o .libs/gmxcpp.o ../../../src/kernel/compute_io.c: In function 'compute_io': ../../../src/kernel/compute_io.c:49:53: warning: unused variable 'nfep' [-Wunused-variable] int nstx=0,nstv=0,nstf=0,nste=0,nstlog=0,nstxtc=0,nfep=0; ^ ../../../src/kernel/gen_vsite.c: In function 'read_vsite_database': ../../../src/kernel/gen_vsite.c:150:34: warning: unused variable 'prevdir' [-Wunused-variable] int i,j,n,k,nvsite,ntop,curdir,prevdir; ^ ../../../src/kernel/gen_vsite.c:150:9: warning: unused variable 'j' [-Wunused-variable] int i,j,n,k,nvsite,ntop,curdir,prevdir; ^ ../../../src/kernel/gen_vsite.c: In function 'add_vsites': ../../../src/kernel/gen_vsite.c:477:33: warning: unused variable 'bb' [-Wunused-variable] int i,j,ftype,other,moreheavy,bb; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_6ring': ../../../src/kernel/gen_vsite.c:560:32: warning: variable 'yCE2' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:27: warning: variable 'xCE2' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:22: warning: variable 'yCE1' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:17: warning: variable 'xCE1' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:13: warning: variable 'yCG' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c: In function 'calc_vsite3_param': ../../../src/kernel/gen_vsite.c:693:13: warning: variable 'b_ik' set but not used [-Wunused-but-set-variable] real b_ij,b_ik; ^ ../../../src/kernel/gen_vsite.c:693:8: warning: variable 'b_ij' set but not used [-Wunused-but-set-variable] real b_ij,b_ik; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_trp': ../../../src/kernel/gen_vsite.c:741:12: warning: unused variable 'c' [-Wunused-variable] real a,b,c[MAXFORCEPARAM]; ^ ../../../src/kernel/gen_vsite.c:740:14: warning: unused variable 'mtot' [-Wunused-variable] real mwtot,mtot,mM[NMASS],dCBM1,dCBM2,dM1M2; ^ ../../../src/kernel/gen_vsite.c:740:8: warning: unused variable 'mwtot' [-Wunused-variable] real mwtot,mtot,mM[NMASS],dCBM1,dCBM2,dM1M2; ^ ../../../src/kernel/gen_vsite.c:738:8: warning: unused variable 'xM' [-Wunused-variable] real xM[NMASS]; ^ ../../../src/kernel/gen_vsite.c:735:8: warning: variable 'a_CB_CG_CD1' set but not used [-Wunused-but-set-variable] real a_CB_CG_CD1,a_CD2_CG_CD1,a_CE2_CZ2_HZ2,a_CZ2_CH2_HH2; ^ ../../../src/kernel/gen_vsite.c:729:20: warning: unused variable 'dist' [-Wunused-variable] real lineA,lineB,dist; ^ ../../../src/kernel/gen_vsite.c:729:14: warning: variable 'lineB' set but not used [-Wunused-but-set-variable] real lineA,lineB,dist; ^ ../../../src/kernel/gen_vsite.c:728:32: warning: unused variable 'I' [-Wunused-variable] real xcom[NMASS],ycom[NMASS],I,alpha; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_tyr': ../../../src/kernel/gen_vsite.c:968:8: warning: unused variable 'vmass' [-Wunused-variable] real vmass,vdist,mM; ^ ../../../src/kernel/convparm.c: In function 'new_interaction_list': ../../../src/kernel/convparm.c:404:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/gen_vsite.c: In function 'do_vsites': ../../../src/kernel/gen_vsite.c:1332:29: warning: unused variable 'bb' [-Wunused-variable] int Hatoms[4],heavies[4],bb; ^ In file included from ../../../src/kernel/gen_vsite.h:41:0, from ../../../src/kernel/gen_vsite.c:44: ../../../src/kernel/gen_vsite.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/gen_vsite.h:43, from ../../../src/kernel/gen_vsite.c:44: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gen_vsite.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gen_vsite.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/convparm.c: In function 'convert_params': ../../../src/kernel/convparm.c:414:12: warning: unused variable 'j' [-Wunused-variable] int i,j,maxtypes,mt; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/convparm.c:44: ../../../src/kernel/convparm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/convparm.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/convparm.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/convparm.c:48: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/convparm.c:48: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/convparm.c:402:13: warning: 'new_interaction_list' defined but not used [-Wunused-function] static void new_interaction_list(t_ilist *ilist) ^ In file included from ../../../src/kernel/add_par.c:44:0: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/add_par.c:46: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gpp_bond_atomtype.lo ../../../src/kernel/gpp_bond_atomtype.c ../../../src/kernel/gen_ad.c: In function 'get_impropers': ../../../src/kernel/gen_ad.c:437:25: warning: unused variable 'r' [-Wunused-variable] int nidih,i,j,k,r,start,ninc,nalloc; ^ ../../../src/kernel/gen_ad.c:436:15: warning: unused variable 'hbidih' [-Wunused-variable] t_rbonded *hbidih; ^ ../../../src/kernel/gen_ad.c:434:14: warning: unused variable 'a0' [-Wunused-variable] char *a0; ^ ../../../src/kernel/gen_ad.c: In function 'clean_excls': ../../../src/kernel/gen_ad.c:576:26: warning: unused variable 'n' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e; ^ ../../../src/kernel/gen_ad.c:576:24: warning: unused variable 'm' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e; ^ ../../../src/kernel/gen_ad.c: In function 'generate_excls': ../../../src/kernel/gen_ad.c:618:28: warning: unused variable 'e' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:24: warning: unused variable 'm' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:21: warning: unused variable 'l1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:19: warning: unused variable 'l' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:16: warning: unused variable 'k1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:14: warning: unused variable 'k' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:11: warning: unused variable 'j1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ In file included from ../../../src/kernel/topdirs.h:40:0, from ../../../src/kernel/gpp_atomtype.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gen_ad.c:48: ../../../src/kernel/gen_ad.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gen_ad.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/gen_ad.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/gen_ad.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/gen_ad.c:51: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/gen_ad.c:57: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/gen_ad.c:114:13: warning: 'aeq' defined but not used [-Wunused-function] static bool aeq(t_param *p1, t_param *p2) ^ ../../../src/kernel/gen_ad.c:289:13: warning: 'ideq' defined but not used [-Wunused-function] static bool ideq(t_param *p1, t_param *p2) ^ ../../../src/kernel/gen_ad.c:327:13: warning: 'dump_param' defined but not used [-Wunused-function] static void dump_param(FILE *fp,char *title,int n,t_param ps[]) ^ ../../../src/kernel/gmxcpp.c: In function 'cpp_close_file': ../../../src/kernel/gmxcpp.c:453:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../src/kernel/genhydro.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/genhydro.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/genhydro.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/genhydro.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/genhydro.h:40:0, from ../../../src/kernel/genhydro.c:56: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/genhydro.h:41, from ../../../src/kernel/genhydro.c:56: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gpp_bond_atomtype.c -fPIC -DPIC -o .libs/gpp_bond_atomtype.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o h_db.lo ../../../src/kernel/h_db.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hackblock.lo ../../../src/kernel/hackblock.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/hackblock.c -fPIC -DPIC -o .libs/hackblock.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/h_db.c -fPIC -DPIC -o .libs/h_db.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hizzie.lo ../../../src/kernel/hizzie.c ../../../src/kernel/h_db.c: In function 'dump_h_db': ../../../src/kernel/h_db.c:113:10: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/h_db.h:41, from ../../../src/kernel/h_db.c:47: ../../../src/kernel/h_db.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/h_db.h:41, from ../../../src/kernel/h_db.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/hizzie.c -fPIC -DPIC -o .libs/hizzie.o In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/hackblock.c:42: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/hackblock.c:42: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/hackblock.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/hackblock.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdb2top.lo ../../../src/kernel/pdb2top.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pgutil.lo ../../../src/kernel/pgutil.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readir.lo ../../../src/kernel/readir.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readpull.lo ../../../src/kernel/readpull.c ../../../src/kernel/hizzie.c: In function 'set_histp': ../../../src/kernel/hizzie.c:195:8: warning: unused variable 'd' [-Wunused-variable] real d; ^ ../../../src/kernel/hizzie.c:192:27: warning: unused variable 'his0' [-Wunused-variable] int i,j,nd,na,aj,hisnr,his0,type=-1; ^ ../../../src/kernel/hizzie.c:192:18: warning: unused variable 'aj' [-Wunused-variable] int i,j,nd,na,aj,hisnr,his0,type=-1; ^ ../../../src/kernel/hizzie.c:188:15: warning: unused variable 'bHaveH' [-Wunused-variable] bool *hbond,bHaveH=FALSE; ^ In file included from ../../../src/kernel/hizzie.c:44:0: ../../../src/kernel/hizzie.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/hizzie.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/hizzie.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/hizzie.c:48: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/pdb2top.c -fPIC -DPIC -o .libs/pdb2top.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/readir.c -fPIC -DPIC -o .libs/readir.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/pgutil.c -fPIC -DPIC -o .libs/pgutil.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o resall.lo ../../../src/kernel/resall.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/readpull.c -fPIC -DPIC -o .libs/readpull.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorting.lo ../../../src/kernel/sorting.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o specbond.lo ../../../src/kernel/specbond.c ../../../src/kernel/pdb2top.c: In function 'missing_atoms': ../../../src/kernel/pdb2top.c:75:16: warning: unused variable 'bRet' [-Wunused-variable] bool bFound, bRet; ^ ../../../src/kernel/readpull.c: In function 'read_pullparams': ../../../src/kernel/readpull.c:102:22: warning: unused variable 'nchar' [-Wunused-variable] int ninp,nerror,i,nchar,ndim,nscan,m; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/resall.c -fPIC -DPIC -o .libs/resall.o In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/readpull.c:45: ../../../src/kernel/readpull.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/readpull.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/readpull.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/readpull.c:54: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readpull.c:54:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/pdb2top.c:43: ../../../src/kernel/pdb2top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/pdb2top.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/pdb2top.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/kernel/pdb2top.h:41:0, from ../../../src/kernel/pdb2top.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/pdb2top.c:50: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/pdb2top.c:57: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/pdb2top.c:57: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/readir.c: In function 'do_index': ../../../src/kernel/readir.c:1427:38: warning: variable 'nbTS' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:32: warning: variable 'nbOPT' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:18: warning: variable 'nSAsteps' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:11: warning: variable 'nSAoff' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:5: warning: variable 'nSAon' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1426:61: warning: variable 'nCASelec' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:53: warning: variable 'nCASorb' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:48: warning: variable 'nbSH' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:40: warning: variable 'nQMmult' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:30: warning: variable 'nQMcharge' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1424:11: warning: unused variable 'SAtime' [-Wunused-variable] real SAtime; ^ ../../../src/kernel/readir.c: In function 'triple_check': ../../../src/kernel/readir.c:1872:17: warning: unused variable 'npct' [-Wunused-variable] int i,m,nmol,npct; ^ In file included from ../../../src/kernel/readir.c:53:0: ../../../src/kernel/readir.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/readir.c:54: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/readir.c:58: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/readir.c:58:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/sorting.c -fPIC -DPIC -o .libs/sorting.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/specbond.c -fPIC -DPIC -o .libs/specbond.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ter_db.lo ../../../src/kernel/ter_db.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tomorse.lo ../../../src/kernel/tomorse.c In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/resall.c:49: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/resall.c:49: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/specbond.c:43:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/pdb2top.h:41:0, from ../../../src/kernel/specbond.h:40, from ../../../src/kernel/specbond.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/specbond.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/specbond.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/ter_db.c -fPIC -DPIC -o .libs/ter_db.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topdirs.lo ../../../src/kernel/topdirs.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/tomorse.c -fPIC -DPIC -o .libs/tomorse.o ../../../src/kernel/ter_db.c: In function 'print_ter_db': ../../../src/kernel/ter_db.c:105:20: warning: unused variable 'nname' [-Wunused-variable] char buf[STRLEN],nname[STRLEN]; ^ ../../../src/kernel/ter_db.c: In function 'filter_ter': ../../../src/kernel/ter_db.c:301:12: warning: unused variable 's2' [-Wunused-variable] char *s,*s2,*c; ^ ../../../src/kernel/ter_db.c:299:13: warning: unused variable 'len' [-Wunused-variable] int i,j,n,len,none_idx; ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/ter_db.c:45: ../../../src/kernel/ter_db.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/ter_db.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topexcl.lo ../../../src/kernel/topexcl.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topdirs.c -fPIC -DPIC -o .libs/topdirs.o In file included from ../../../src/kernel/tomorse.c:46:0: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topexcl.c -fPIC -DPIC -o .libs/topexcl.o In file included from ../../../include/gpp_nextnb.h:40:0, from ../../../src/kernel/topexcl.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topio.lo ../../../src/kernel/topio.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o toppush.lo ../../../src/kernel/toppush.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topshake.lo ../../../src/kernel/topshake.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o toputil.lo ../../../src/kernel/toputil.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpbcmp.lo ../../../src/kernel/tpbcmp.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/toppush.c -fPIC -DPIC -o .libs/toppush.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topshake.c -fPIC -DPIC -o .libs/topshake.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vsite_parm.lo ../../../src/kernel/vsite_parm.c ../../../src/kernel/toppush.c: In function 'push_bt': ../../../src/kernel/toppush.c:573:37: warning: variable 'nrfpB' set but not used [-Wunused-but-set-variable] int i,ft,ftype,nn,nrfp,nrfpA,nrfpB; ^ ../../../src/kernel/toppush.c: In function 'push_dihedraltype': ../../../src/kernel/toppush.c:661:37: warning: variable 'nrfpB' set but not used [-Wunused-but-set-variable] int i,ft,ftype,nn,nrfp,nrfpA,nrfpB,nral; ^ ../../../src/kernel/toppush.c: In function 'push_nbt': ../../../src/kernel/toppush.c:778:17: warning: unused variable 'sig6' [-Wunused-variable] real cr[4],sig6; ^ ../../../src/kernel/toppush.c:776:23: warning: unused variable 'atnr' [-Wunused-variable] int i,f,n,ftype,atnr,nrfp; ^ ../../../src/kernel/toppush.c: In function 'push_atom_now': ../../../src/kernel/toppush.c:871:7: warning: unused variable 'j' [-Wunused-variable] int j,resnr_diff=-1; ^ ../../../src/kernel/toppush.c: In function 'push_bond': ../../../src/kernel/toppush.c:1234:18: warning: unused variable 'paramB' [-Wunused-variable] t_param param,paramB,*param_defA,*param_defB; ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.c:48: ../../../src/kernel/toppush.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/toppush.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/toppush.c:51:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topio.c -fPIC -DPIC -o .libs/topio.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/tpbcmp.c -fPIC -DPIC -o .libs/tpbcmp.o ../../../src/kernel/topshake.c: In function 'make_shake': ../../../src/kernel/topshake.c:98:19: warning: unused variable 'b' [-Wunused-variable] int nb,b,i,j,ftype,ftype_a; ^ ../../../src/kernel/topshake.c:98:16: warning: unused variable 'nb' [-Wunused-variable] int nb,b,i,j,ftype,ftype_a; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topshake.c:46: ../../../src/kernel/topshake.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/topshake.c:46: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/topshake.c:46:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/toputil.c -fPIC -DPIC -o .libs/toputil.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xlate.lo ../../../src/kernel/xlate.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/vsite_parm.c -fPIC -DPIC -o .libs/vsite_parm.o In file included from ../../../src/kernel/topdirs.h:40:0, from ../../../src/kernel/toputil.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/toputil.c:135:13: warning: 'print_nbt' defined but not used [-Wunused-function] static void print_nbt (FILE *out,char *title,t_atomtype at, ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_block': ../../../src/kernel/tpbcmp.c:242:11: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:242:9: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:242:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_blocka': ../../../src/kernel/tpbcmp.c:252:11: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:252:9: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:252:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_atom': ../../../src/kernel/tpbcmp.c:265:8: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ ../../../src/kernel/tpbcmp.c:264:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_top': ../../../src/kernel/tpbcmp.c:302:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/topio.c: In function 'read_topol': ../../../src/kernel/topio.c:314:15: warning: unused variable 'block' [-Wunused-variable] t_topology *block=NULL; ^ ../../../src/kernel/tpbcmp.c: In function 'comp_tpx': ../../../src/kernel/tpbcmp.c:567:15: warning: unused variable 'sh' [-Wunused-variable] t_tpxheader sh[2]; ^ In file included from ../../../src/kernel/vsite_parm.h:41:0, from ../../../src/kernel/topio.c:59: ../../../src/kernel/topio.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/topio.c:66: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/topio.c:66: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/tpbcmp.c: In function 'comp_enx': ../../../src/kernel/tpbcmp.c:723:38: warning: unused variable 'buf' [-Wunused-variable] char **enm1=NULL,**enm2=NULL,buf[256]; ^ ../../../src/kernel/tpbcmp.c:721:36: warning: unused variable 'block' [-Wunused-variable] int in1,in2,nre,nre1,nre2,block; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/tpbcmp.c:48: ../../../src/kernel/tpbcmp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/tpbcmp.c:77:13: warning: 'cmp_uc' defined but not used [-Wunused-function] static void cmp_uc(FILE *fp,char *s,int index,unsigned char i1,unsigned char i2) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/xlate.c -fPIC -DPIC -o .libs/xlate.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o grompp.o ../../../src/kernel/grompp.c ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_bonds': ../../../src/kernel/vsite_parm.c:862:62: warning: unused variable 'vsitetype' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:862:30: warning: unused variable 'l' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:862:22: warning: unused variable 'parnr' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_angles': ../../../src/kernel/vsite_parm.c:1035:51: warning: unused variable 'vsitetype' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:1035:24: warning: unused variable 'l' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:1035:16: warning: unused variable 'parnr' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_dihs': ../../../src/kernel/vsite_parm.c:1130:28: warning: unused variable 'l' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ ../../../src/kernel/vsite_parm.c:1130:20: warning: unused variable 'parnr' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ ../../../src/kernel/vsite_parm.c:1130:12: warning: unused variable 'ftype' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ In file included from ../../../src/kernel/vsite_parm.h:41:0, from ../../../src/kernel/vsite_parm.c:43: ../../../src/kernel/vsite_parm.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/vsite_parm.c:45: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/vsite_parm.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/vsite_parm.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o glaasje.o ../../../src/kernel/glaasje.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gctio.o ../../../src/kernel/gctio.c ../../../src/kernel/grompp.c: In function 'new_status': ../../../src/kernel/grompp.c:300:3: warning: statement with no effect [-Wunused-value] mbs; ^ ../../../src/kernel/grompp.c: In function 'read_posres': ../../../src/kernel/grompp.c:478:10: warning: unused variable 'bFirst' [-Wunused-variable] bool bFirst = TRUE; ^ ../../../src/kernel/grompp.c: In function 'gen_posres': ../../../src/kernel/grompp.c:604:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/kernel/grompp.c:604:7: warning: unused variable 'i' [-Wunused-variable] int i,j; ^ ../../../src/kernel/grompp.c: In function 'main': ../../../src/kernel/grompp.c:769:16: warning: unused variable 'natoms' [-Wunused-variable] int natoms,nvsite,comb,mt; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/grompp.c:50: ../../../src/kernel/grompp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/grompp.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/grompp.c:50:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/grompp.c:54:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/grompp.c:60: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/grompp.c:60:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/add_par.h:41, from ../../../src/kernel/grompp.c:74: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/gctio.c:41: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/kernel/gctio.c:49:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/glaasje.c: In function 'do_glas': ../../../src/kernel/glaasje.c:55:40: warning: unused variable 'r3' [-Wunused-variable] real wd,wdd,zi,fz,dd,d10,d4,d9,d3,r9,r3,sign,cc6,cc12; ^ ../../../src/kernel/glaasje.c:55:37: warning: unused variable 'r9' [-Wunused-variable] real wd,wdd,zi,fz,dd,d10,d4,d9,d3,r9,r3,sign,cc6,cc12; ^ In file included from ../../../src/kernel/glaasje.c:44:0: ../../../src/kernel/glaasje.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ionize.o ../../../src/kernel/ionize.c In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/ionize.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/ionize.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_gct.o ../../../src/kernel/do_gct.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o repl_ex.o ../../../src/kernel/repl_ex.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xutils.o ../../../src/kernel/xutils.c ../../../src/kernel/repl_ex.c: In function 'init_replica_exchange': ../../../src/kernel/repl_ex.c:111:8: warning: unused variable 'temp' [-Wunused-variable] real temp,pres; ^ ../../../src/kernel/repl_ex.c: In function 'replica_exchange': ../../../src/kernel/repl_ex.c:560:20: warning: unused variable 'shift' [-Wunused-variable] int exchange=-1,shift; ^ In file included from ../../../src/kernel/repl_ex.c:46:0: ../../../src/kernel/repl_ex.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/repl_ex.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/repl_ex.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/repl_ex.c:544:13: warning: 'write_debug_x' defined but not used [-Wunused-function] static void write_debug_x(t_state *state) ^ ../../../src/kernel/do_gct.c: In function 'init_coupling': ../../../src/kernel/do_gct.c:63:19: warning: unused variable 'atj' [-Wunused-variable] int ati,atj; ^ ../../../src/kernel/do_gct.c:63:15: warning: unused variable 'ati' [-Wunused-variable] int ati,atj; ^ ../../../src/kernel/do_gct.c:62:26: warning: unused variable 'j' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:20: warning: unused variable 'index' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:17: warning: unused variable 'nc' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:15: warning: unused variable 'i' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c: In function 'gprod': ../../../src/kernel/do_gct.c:343:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/do_gct.c: In function 'do_coupling': ../../../src/kernel/xutils.c: In function 'calc_mu_aver': ../../../src/kernel/xutils.c:65:19: warning: variable 'end' set but not used [-Wunused-but-set-variable] int i,start,end; ^ ../../../src/kernel/do_gct.c:489:15: warning: unused variable 'bTest' [-Wunused-variable] bool bTest,bPrint; ^ ../../../src/kernel/do_gct.c:487:59: warning: unused variable 'xi12' [-Wunused-variable] real Epol,Eintern,Virial,muabs,xiH=-1,xiS=-1,xi6,xi12; ^ ../../../src/kernel/do_gct.c:487:55: warning: unused variable 'xi6' [-Wunused-variable] real Epol,Eintern,Virial,muabs,xiH=-1,xiS=-1,xi6,xi12; ^ ../../../src/kernel/do_gct.c:486:32: warning: unused variable 'ffc' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:486:28: warning: unused variable 'ffb' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:486:24: warning: unused variable 'ffa' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:485:60: warning: unused variable 'rmsf' [-Wunused-variable] real deviation[eoObsNR],prdev[eoObsNR],epot0,dist,rmsf; ^ In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/do_gct.c:41: ../../../src/kernel/do_gct.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/kernel/do_gct.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/kernel/do_gct.c:48: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/do_gct.c:50:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/do_gct.c:457:13: warning: 'dump_fm' defined but not used [-Wunused-function] static void dump_fm(FILE *fp,int n,real f[],char *s) ^ ../../../src/kernel/xutils.c: In function 'update_forcefield': ../../../src/kernel/xutils.c:335:10: warning: unused variable 'bDone' [-Wunused-variable] bool bDone; ^ In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/xutils.c:44: ../../../src/kernel/xutils.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/xutils.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/xutils.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o md.o ../../../src/kernel/md.c ../../../src/kernel/md.c: In function 'mdrunner': ../../../src/kernel/md.c:140:15: warning: unused variable 'gro' [-Wunused-variable] char *gro; ^ ../../../src/kernel/md.c:139:45: warning: unused variable 'nalloc' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:139:16: warning: unused variable 'm' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:139:14: warning: unused variable 'i' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:128:20: warning: unused variable 'tmpr2' [-Wunused-variable] real tmpr1,tmpr2; ^ ../../../src/kernel/md.c:128:14: warning: unused variable 'tmpr1' [-Wunused-variable] real tmpr1,tmpr2; ^ ../../../src/kernel/md.c: In function 'do_md': ../../../src/kernel/md.c:533:16: warning: unused variable 'grpname' [-Wunused-variable] char *grpname; ^ ../../../src/kernel/md.c:525:15: warning: unused variable 'timestep' [-Wunused-variable] real timestep=0; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/md.c:45: ../../../src/kernel/md.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/md.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/md.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/kernel/md.c:69: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdrun.o ../../../src/kernel/mdrun.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genalg.o ../../../src/kernel/genalg.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpbconv.o ../../../src/kernel/tpbconv.c ../../../src/kernel/mdrun.c: In function 'main': ../../../src/kernel/mdrun.c:387:20: warning: unused variable 'fptest' [-Wunused-variable] FILE *fplog,*fptest; ^ ../../../src/kernel/mdrun.c:386:12: warning: unused variable 'HaveCheckpoint' [-Wunused-variable] bool HaveCheckpoint; ^ ../../../src/kernel/mdrun.c:285:15: warning: unused variable 'bPPPME' [-Wunused-variable] static bool bPPPME = FALSE; ^ ../../../src/kernel/mdrun.c:284:15: warning: unused variable 'bCart' [-Wunused-variable] static bool bCart = FALSE; ^ In file included from ../../../src/kernel/mdrun.c:42:0: ../../../src/kernel/mdrun.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/mdrun.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/kernel/mdrun.c:49: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/kernel/mdrun.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/kernel/mdrun.c:49: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdb2gmx.o ../../../src/kernel/pdb2gmx.c ../../../src/kernel/tpbconv.c: In function 'main': ../../../src/kernel/tpbconv.c:365:7: warning: unused variable 'nerror' [-Wunused-variable] int nerror = 0; ^ ../../../src/kernel/tpbconv.c:325:17: warning: unused variable 'gopts' [-Wunused-variable] t_gromppopts *gopts; ^ ../../../src/kernel/tpbconv.c:324:21: warning: unused variable 'irnew' [-Wunused-variable] t_inputrec *ir,*irnew=NULL; ^ ../../../src/kernel/tpbconv.c:318:33: warning: unused variable 'nsteps_org' [-Wunused-variable] int i,frame,run_step,nsteps_org; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/tpbconv.c:52: ../../../src/kernel/tpbconv.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/tpbconv.c:52: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/tpbconv.c:52:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/tpbconv.c:54:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/tpbconv.c:56: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/tpbconv.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o protonate.o ../../../src/kernel/protonate.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o luck.o ../../../src/kernel/luck.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxdump.o ../../../src/kernel/gmxdump.c In file included from ../../../src/kernel/pdb2gmx.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/pdb2gmx.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/pdb2gmx.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/pdb2gmx.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/pdb2gmx.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/pdb2gmx.c:55: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/pdb2gmx.c:149:20: warning: 'get_cystp' defined but not used [-Wunused-function] static const char *get_cystp(int resnr) ^ In file included from ../../../src/kernel/luck.c:41:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/luck.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/genalg.c: In function 'update_ga': ../../../src/kernel/genalg.c:197:12: warning: unused variable 'j' [-Wunused-variable] int i, j, L, n; /* counting variables */ ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/genalg.c:75: ../../../src/kernel/genalg.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/genalg.c:75:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxcheck.o ../../../src/kernel/gmxcheck.c ../../../src/kernel/gmxdump.c: In function 'list_tpx': ../../../src/kernel/gmxdump.c:146:16: warning: left-hand operand of comma expression has no effect [-Wunused-value] if (state,tpx.bF) { ^ ../../../src/kernel/gmxdump.c:99:20: warning: unused variable 'fp' [-Wunused-variable] int step,fp,indent,i,j,**gcount,atot; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o x2top.o ../../../src/kernel/x2top.c ../../../src/kernel/gmxdump.c: In function 'list_ene': ../../../src/kernel/gmxdump.c:314:17: warning: unused variable 'ndr' [-Wunused-variable] int in,ndr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/gmxdump.c:46: ../../../src/kernel/gmxdump.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/gmxdump.c:47:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/kernel/gmxdump.c:65:13: warning: 'dump_top' defined but not used [-Wunused-function] static void dump_top(FILE *fp,t_topology *top,char *tpr) ^ In file included from ../../../src/kernel/protonate.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/protonate.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/genhydro.h:40:0, from ../../../src/kernel/protonate.c:47: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/genhydro.h:41, from ../../../src/kernel/protonate.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/protonate.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/protonate.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/gmxcheck.c: In function 'tpx2system': ../../../src/kernel/gmxcheck.c:90:7: warning: unused variable 'i' [-Wunused-variable] int i,nmol,nvsite=0; ^ ../../../src/kernel/gmxcheck.c: In function 'tpx2methods': ../../../src/kernel/gmxcheck.c:140:15: warning: unused variable 'i' [-Wunused-variable] int i,step; ^ ../../../src/kernel/gmxcheck.c:136:15: warning: unused variable 'sh' [-Wunused-variable] t_tpxheader sh; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_bonds': ../../../src/kernel/gmxcheck.c:202:26: warning: variable 'devtot' set but not used [-Wunused-but-set-variable] real b0,blen,deviation,devtot; ^ ../../../src/kernel/gmxcheck.c:201:14: warning: unused variable 'i' [-Wunused-variable] int ftype,i,k,ai,aj,type; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_trj': ../../../src/kernel/gmxcheck.c:252:35: warning: unused variable 'bOK' [-Wunused-variable] bool bShowTimestep=TRUE,bOK,newline=FALSE; ^ ../../../src/kernel/gmxcheck.c:251:40: warning: unused variable 'prec' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:251:23: warning: unused variable 'tt' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:251:16: warning: unused variable 'rdum' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:250:16: warning: variable 'fpos' set but not used [-Wunused-but-set-variable] off_t fpos; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_ndx': ../../../src/kernel/gmxcheck.c:526:10: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_enx': ../../../src/kernel/gmxcheck.c:550:25: warning: unused variable 'ndr' [-Wunused-variable] int in,nre,fnr,ndr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/gmxcheck.c:47: ../../../src/kernel/gmxcheck.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/gmxcheck.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gmxcheck.c:57: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gmxcheck.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nm2type.o ../../../src/kernel/nm2type.c ../../../src/kernel/nm2type.c: In function 'rd_nm2type': ../../../src/kernel/nm2type.c:72:20: warning: unused variable 'blen' [-Wunused-variable] double qq,mm,*blen; ^ ../../../src/kernel/nm2type.c: In function 'nm2type': ../../../src/kernel/nm2type.c:160:38: warning: unused variable 'quality' [-Wunused-variable] int *bbb,*n_mask,*m_mask,**match,**quality; ^ In file included from ../../../src/kernel/nm2type.c:42:0: ../../../src/kernel/nm2type.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/nm2type.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/nm2type.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/nm2type.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.h:41, from ../../../src/kernel/nm2type.c:58: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/nm2type.c:59: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/x2top.c: In function 'set_cgnr': ../../../src/kernel/x2top.c:178:15: warning: unused variable 'mt' [-Wunused-variable] double qt=0,mt=0; ^ ../../../src/kernel/x2top.c: In function 'set_force_const': ../../../src/kernel/x2top.c:255:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/x2top.c: In function 'main': ../../../src/kernel/x2top.c:419:15: warning: unused variable 'scale' [-Wunused-variable] static real scale = 1.1, kb = 4e5,kt = 400,kp = 5; ^ ../../../src/kernel/x2top.c:411:14: warning: unused variable 'cutoff' [-Wunused-variable] real cutoff,qtot,mtot; ^ ../../../src/kernel/x2top.c:408:24: warning: unused variable 'ndih' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:22: warning: unused variable 'm' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:20: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:18: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:16: warning: unused variable 'j' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:14: warning: unused variable 'i' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:407:14: warning: unused variable 'nres' [-Wunused-variable] int nres; /* number of molecules? */ ^ /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libgmxpreprocess_d.la add_par.lo compute_io.lo convparm.lo gen_ad.lo gen_vsite.lo genhydro.lo gmxcpp.lo gpp_atomtype.lo gpp_bond_atomtype.lo h_db.lo hackblock.lo hizzie.lo pdb2top.lo pgutil.lo readir.lo readpull.lo resall.lo sorting.lo specbond.lo ter_db.lo tomorse.lo topdirs.lo topexcl.lo topio.lo toppush.lo topshake.lo toputil.lo tpbcmp.lo vsite_parm.lo xlate.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath In file included from ../../../src/kernel/x2top.c:40:0: ../../../src/kernel/x2top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/x2top.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/x2top.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/x2top.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.h:41, from ../../../src/kernel/x2top.c:58: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/x2top.c:59: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/gen_ad.h:42, from ../../../src/kernel/x2top.c:60: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/x2top.c:80:13: warning: 'set_x_blen' defined but not used [-Wunused-function] static real set_x_blen(real scale) ^ ../../../src/kernel/x2top.c:117:12: warning: 'get_atype' defined but not used [-Wunused-function] static int get_atype(char *nm) ^ ar cru .libs/libgmxpreprocess_d.a .libs/add_par.o .libs/compute_io.o .libs/convparm.o .libs/gen_ad.o .libs/gen_vsite.o .libs/genhydro.o .libs/gmxcpp.o .libs/gpp_atomtype.o .libs/gpp_bond_atomtype.o .libs/h_db.o .libs/hackblock.o .libs/hizzie.o .libs/pdb2top.o .libs/pgutil.o .libs/readir.o .libs/readpull.o .libs/resall.o .libs/sorting.o .libs/specbond.o .libs/ter_db.o .libs/tomorse.o .libs/topdirs.o .libs/topexcl.o .libs/topio.o .libs/toppush.o .libs/topshake.o .libs/toputil.o .libs/tpbcmp.o .libs/vsite_parm.o .libs/xlate.o ranlib .libs/libgmxpreprocess_d.a creating libgmxpreprocess_d.la (cd .libs && rm -f libgmxpreprocess_d.la && ln -s ../libgmxpreprocess_d.la libgmxpreprocess_d.la) /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o grompp grompp.o libgmxpreprocess_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o tpbconv tpbconv.o libgmxpreprocess_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o protonate protonate.o libgmxpreprocess_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o luck luck.o libgmxpreprocess_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o gmxdump gmxdump.o libgmxpreprocess_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o gmxcheck gmxcheck.o libgmxpreprocess_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o x2top x2top.o nm2type.o libgmxpreprocess_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o mdrun glaasje.o gctio.o ionize.o do_gct.o repl_ex.o xutils.o md.o mdrun.o genalg.o libgmxpreprocess_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/grompp grompp.o ./.libs/libgmxpreprocess_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/protonate protonate.o ./.libs/libgmxpreprocess_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/tpbconv tpbconv.o ./.libs/libgmxpreprocess_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/gmxdump gmxdump.o ./.libs/libgmxpreprocess_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/luck luck.o ./.libs/libgmxpreprocess_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/gmxcheck gmxcheck.o ./.libs/libgmxpreprocess_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating grompp creating protonate /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o pdb2gmx pdb2gmx.o libgmxpreprocess_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath creating luck creating gmxcheck creating tpbconv creating gmxdump DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/mdrun glaasje.o gctio.o ionize.o do_gct.o repl_ex.o xutils.o md.o mdrun.o genalg.o ./.libs/libgmxpreprocess_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/x2top x2top.o nm2type.o ./.libs/libgmxpreprocess_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating mdrun creating x2top DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/pdb2gmx pdb2gmx.o ./.libs/libgmxpreprocess_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating pdb2gmx make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/kernel' Making all in tools make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/tools' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o autocorr.lo ../../../src/tools/autocorr.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o expfit.lo ../../../src/tools/expfit.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o polynomials.lo ../../../src/tools/polynomials.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o levenmar.lo ../../../src/tools/levenmar.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o anadih.lo ../../../src/tools/anadih.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pp2shift.lo ../../../src/tools/pp2shift.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlist.lo ../../../src/tools/dlist.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eigio.lo ../../../src/tools/eigio.c mkdir .libs mkdir .libs mkdir: cannot create directory '.libs': File exists x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/anadih.c -fPIC -DPIC -o .libs/anadih.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/dlist.c -fPIC -DPIC -o .libs/dlist.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/polynomials.c -fPIC -DPIC -o .libs/polynomials.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/expfit.c -fPIC -DPIC -o .libs/expfit.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/levenmar.c -fPIC -DPIC -o .libs/levenmar.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/pp2shift.c -fPIC -DPIC -o .libs/pp2shift.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/eigio.c -fPIC -DPIC -o .libs/eigio.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/autocorr.c -fPIC -DPIC -o .libs/autocorr.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/anadih.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/anadih.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/anadih.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/levenmar.c:78:16: warning: 'dvector' defined but not used [-Wunused-function] static double *dvector(int nl, int nh) ^ ../../../src/tools/levenmar.c:106:17: warning: 'dmatrix' defined but not used [-Wunused-function] static double **dmatrix(int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:123:14: warning: 'imatrix1' defined but not used [-Wunused-function] static int **imatrix1(int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:141:15: warning: 'submatrix' defined but not used [-Wunused-function] static real **submatrix(real **a, int oldrl, int oldrh, int oldcl, ^ ../../../src/tools/levenmar.c:168:13: warning: 'free_dvector' defined but not used [-Wunused-function] static void free_dvector(int *v, int nl) ^ ../../../src/tools/levenmar.c:183:13: warning: 'free_dmatrix' defined but not used [-Wunused-function] static void free_dmatrix(double **m, int nrl, int nrh, int ncl) ^ ../../../src/tools/levenmar.c:191:13: warning: 'free_imatrix' defined but not used [-Wunused-function] static void free_imatrix(int **m, int nrl, int nrh, int ncl) ^ ../../../src/tools/levenmar.c:201:13: warning: 'free_submatrix' defined but not used [-Wunused-function] static void free_submatrix(real **b, int nrl) ^ ../../../src/tools/levenmar.c:208:15: warning: 'convert_matrix' defined but not used [-Wunused-function] static real **convert_matrix(real *a, int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:224:13: warning: 'free_convert_matrix' defined but not used [-Wunused-function] static void free_convert_matrix(real **b, int nrl) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/autocorr.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/autocorr.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/autocorr.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.h:40, from ../../../src/tools/autocorr.c:53: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/eigio.c:41: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/eigio.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/dlist.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/polynomials.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/pp2shift.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/pp2shift.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/expfit.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/expfit.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/expfit.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o lsq.lo ../../../src/tools/lsq.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o cmat.lo ../../../src/tools/cmat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/lsq.c -fPIC -DPIC -o .libs/lsq.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eigensolver.lo ../../../src/tools/eigensolver.c In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/lsq.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/lsq.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/lsq.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/cmat.c -fPIC -DPIC -o .libs/cmat.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nsc.lo ../../../src/tools/nsc.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/eigensolver.c -fPIC -DPIC -o .libs/eigensolver.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hxprops.lo ../../../src/tools/hxprops.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fitahx.lo ../../../src/tools/fitahx.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_analyze.lo ../../../src/tools/gmx_analyze.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/nsc.c -fPIC -DPIC -o .libs/nsc.o ../../../src/tools/eigensolver.c: In function 'eigensolver': ../../../src/tools/eigensolver.c:65:16: warning: unused variable 'iu' [-Wunused-variable] int il,iu,m,iw0,info; ^ ../../../src/tools/eigensolver.c:65:13: warning: unused variable 'il' [-Wunused-variable] int il,iu,m,iw0,info; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/hxprops.c -fPIC -DPIC -o .libs/hxprops.o ../../../src/tools/nsc.c: In function 'nsc_dclm_pbc': ../../../src/tools/nsc.c:652:21: warning: unused variable 'm' [-Wunused-variable] int ix,iy,iz,m; ^ ../../../src/tools/nsc.c:551:16: warning: unused variable 'jat_xx' [-Wunused-variable] int iat_xx,jat_xx; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/nsc.c:48: ../../../src/tools/nsc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/nsc.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/hxprops.c: In function 'ellipticity': ../../../src/tools/hxprops.c:85:14: warning: unused variable 'Xi' [-Wunused-variable] const real Xi=1.0; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/hxprops.c:46: ../../../src/tools/hxprops.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/hxprops.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/fitahx.c -fPIC -DPIC -o .libs/fitahx.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_analyze.c -fPIC -DPIC -o .libs/gmx_analyze.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_anaeig.lo ../../../src/tools/gmx_anaeig.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/fitahx.c:41: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/fitahx.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_analyze.c: In function 'luzar_correl': ../../../src/tools/gmx_analyze.c:514:8: warning: unused variable 'weight' [-Wunused-variable] real weight,d2; ^ ../../../src/tools/gmx_analyze.c:512:14: warning: unused variable 'tol' [-Wunused-variable] const real tol = 1e-8; ^ ../../../src/tools/gmx_analyze.c: In function 'gmx_analyze': ../../../src/tools/gmx_analyze.c:744:63: warning: unused variable 'bLuzarError' [-Wunused-variable] static bool bIntegrate=FALSE,bRegression=FALSE,bLuzar=FALSE,bLuzarError=FALSE; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_analyze.c:41: ../../../src/tools/gmx_analyze.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_analyze.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_analyze.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_analyze.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_analyze.c:273:13: warning: 'anal_ee' defined but not used [-Wunused-function] static real anal_ee(real *parm,real T,real t) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_angle.lo ../../../src/tools/gmx_angle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_anaeig.c -fPIC -DPIC -o .libs/gmx_anaeig.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_bond.lo ../../../src/tools/gmx_bond.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_bundle.lo ../../../src/tools/gmx_bundle.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_chi.lo ../../../src/tools/gmx_chi.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_angle.c -fPIC -DPIC -o .libs/gmx_angle.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_bundle.c -fPIC -DPIC -o .libs/gmx_bundle.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_bond.c -fPIC -DPIC -o .libs/gmx_bond.o ../../../src/tools/gmx_angle.c: In function 'gmx_angle': ../../../src/tools/gmx_angle.c:147:14: warning: unused variable 'buf' [-Wunused-variable] char buf[80]; ^ ../../../src/tools/gmx_angle.c:143:38: warning: unused variable 'fraction' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:143:16: warning: unused variable 'aa' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:143:14: warning: unused variable 't' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:138:55: warning: unused variable 'angind' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:39: warning: unused variable 'nat2' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:32: warning: unused variable 'natoms' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:18: warning: unused variable 'total' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:135:21: warning: unused variable 'Jc' [-Wunused-variable] real maxang,Jc,S2,norm_fac,maxstat; ^ ../../../src/tools/gmx_angle.c:132:14: warning: unused variable 'status' [-Wunused-variable] int status,isize; ^ ../../../src/tools/gmx_angle.c:131:14: warning: unused variable 'tmp' [-Wunused-variable] real tmp,dt; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_angle.c:47: ../../../src/tools/gmx_angle.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_angle.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_angle.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_angle.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_bundle.c: In function 'dump_axes': ../../../src/tools/gmx_bundle.c:141:17: warning: unused variable 'end' [-Wunused-variable] int i,end; ^ ../../../src/tools/gmx_bundle.c: In function 'gmx_bundle': ../../../src/tools/gmx_bundle.c:210:16: warning: unused variable 'j' [-Wunused-variable] int i,j,gnx[MAX_ENDS]; ^ ../../../src/tools/gmx_bundle.c:208:14: warning: unused variable 'natoms' [-Wunused-variable] int natoms; ^ ../../../src/tools/gmx_bundle.c:198:15: warning: unused variable 'out' [-Wunused-variable] FILE *out,*flen,*fdist,*fz,*ftilt,*ftiltr,*ftiltl; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_bundle.c:42: ../../../src/tools/gmx_bundle.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_bundle.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_bundle.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_bundle.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_chi.c -fPIC -DPIC -o .libs/gmx_chi.o ../../../src/tools/gmx_chi.c: In function 'histogramming': ../../../src/tools/gmx_chi.c:418:23: warning: unused variable 'his_aa1' [-Wunused-variable] int ***his_aa,**his_aa1,*histmp; ^ ../../../src/tools/gmx_chi.c: In function 'print_transitions': ../../../src/tools/gmx_chi.c:834:8: warning: variable 'nh' set but not used [-Wunused-but-set-variable] int nh[edMax]; ^ ../../../src/tools/gmx_chi.c: In function 'gmx_chi': ../../../src/tools/gmx_chi.c:1098:16: warning: unused variable 'j' [-Wunused-variable] int i,j,**chi_lookup,*xity; ^ In file included from ../../../src/tools/gmx_chi.c:43:0: ../../../src/tools/gmx_chi.c: At top level: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/tools/gmx_chi.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_chi.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_chi.c:49:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_chi.c:59:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_anaeig.c: In function 'calc_entropy_schlitter': ../../../src/tools/gmx_anaeig.c:98:10: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ ../../../src/tools/gmx_anaeig.c:97:16: warning: unused variable 'm' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:97:14: warning: unused variable 'k' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:97:12: warning: unused variable 'j' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:96:11: warning: unused variable 'indx' [-Wunused-variable] int *indx; ^ ../../../src/tools/gmx_anaeig.c: In function 'compare': ../../../src/tools/gmx_anaeig.c:224:12: warning: unused variable 'nrow' [-Wunused-variable] int n,nrow; ^ ../../../src/tools/gmx_anaeig.c: In function 'rmsf': ../../../src/tools/gmx_anaeig.c:692:9: warning: unused variable 'nrow' [-Wunused-variable] int nrow,g,v,i; ^ ../../../src/tools/gmx_anaeig.c: In function 'gmx_anaeig': ../../../src/tools/gmx_anaeig.c:835:21: warning: unused variable 'step' [-Wunused-variable] int natoms,step; ^ ../../../src/tools/gmx_anaeig.c:834:42: warning: unused variable 'lambda' [-Wunused-variable] real xid,totmass,*sqrtm,*w_rls,t,lambda; ^ ../../../src/tools/gmx_anaeig.c:834:14: warning: unused variable 'xid' [-Wunused-variable] real xid,totmass,*sqrtm,*w_rls,t,lambda; ^ ../../../src/tools/gmx_anaeig.c:832:18: warning: unused variable 'xread' [-Wunused-variable] rvec *x,*xread,*xav1,*xav2,**eigvec1=NULL,**eigvec2=NULL; ^ ../../../src/tools/gmx_anaeig.c:832:15: warning: unused variable 'x' [-Wunused-variable] rvec *x,*xread,*xav1,*xav2,**eigvec1=NULL,**eigvec2=NULL; ^ ../../../src/tools/gmx_anaeig.c:825:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_anaeig.c:825:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_anaeig.c:824:15: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_anaeig.c:41: ../../../src/tools/gmx_anaeig.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_anaeig.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_anaeig.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_anaeig.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_anaeig.c:53:0: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_bond.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_bond.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_bond.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_bond.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_cluster.lo ../../../src/tools/gmx_cluster.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_confrms.lo ../../../src/tools/gmx_confrms.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_covar.lo ../../../src/tools/gmx_covar.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_current.lo ../../../src/tools/gmx_current.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_cluster.c -fPIC -DPIC -o .libs/gmx_cluster.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_covar.c -fPIC -DPIC -o .libs/gmx_covar.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_confrms.c -fPIC -DPIC -o .libs/gmx_confrms.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_current.c -fPIC -DPIC -o .libs/gmx_current.o ../../../src/tools/gmx_cluster.c: In function 'mark_clusters': ../../../src/tools/gmx_cluster.c:638:11: warning: unused variable 'v' [-Wunused-variable] int i,j,v; ^ In file included from ../../../src/tools/gmx_cluster.c:45:0: ../../../src/tools/gmx_cluster.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_cluster.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_cluster.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_cluster.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_confrms.c: In function 'find_matching_names': ../../../src/tools/gmx_confrms.c:252:35: warning: unused variable 'atnm2' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:27: warning: unused variable 'atnm1' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:18: warning: unused variable 'resnm2' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:9: warning: unused variable 'resnm1' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:249:7: warning: unused variable 'r' [-Wunused-variable] int r,rnr1, rnr2, prnr1, prnr2; ^ ../../../src/tools/gmx_confrms.c:247:7: warning: unused variable 'i' [-Wunused-variable] int i, i1, i2, ii1, ii2, m1, m2; ^ ../../../src/tools/gmx_confrms.c: In function 'gmx_confrms': ../../../src/tools/gmx_confrms.c:407:17: warning: unused variable 'tmas2' [-Wunused-variable] real tmas1,tmas2; ^ ../../../src/tools/gmx_confrms.c:407:11: warning: unused variable 'tmas1' [-Wunused-variable] real tmas1,tmas2; ^ ../../../src/tools/gmx_confrms.c:404:13: warning: unused variable 'j' [-Wunused-variable] int i,j,m; ^ In file included from ../../../src/tools/gmx_confrms.c:46:0: ../../../src/tools/gmx_confrms.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_confrms.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_confrms.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_confrms.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_confrms.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/tools/gmx_current.c: In function 'calc_mjdsp': ../../../src/tools/gmx_current.c:266:7: warning: unused variable 'rfr' [-Wunused-variable] real rfr; ^ ../../../src/tools/gmx_current.c:265:8: warning: unused variable 'rtmp' [-Wunused-variable] real rtmp; ^ ../../../src/tools/gmx_current.c: In function 'dielectric': ../../../src/tools/gmx_current.c:338:8: warning: variable 'rest' set but not used [-Wunused-but-set-variable] real rest=0.0; ^ ../../../src/tools/gmx_current.c:326:8: warning: unused variable 'qtmp' [-Wunused-variable] real qtmp; ^ ../../../src/tools/gmx_current.c:308:13: warning: unused variable 'dm_d' [-Wunused-variable] real dm_s,dm_d; ^ ../../../src/tools/gmx_current.c:308:8: warning: unused variable 'dm_s' [-Wunused-variable] real dm_s,dm_d; ^ ../../../src/tools/gmx_current.c:298:8: warning: unused variable 'rfr' [-Wunused-variable] real rfr=0.0; ^ ../../../src/tools/gmx_current.c:293:33: warning: variable 'itrust' set but not used [-Wunused-but-set-variable] int valloc,nalloc,nfr,nvfr,m,itrust=0; ^ ../../../src/tools/gmx_current.c:293:31: warning: unused variable 'm' [-Wunused-variable] int valloc,nalloc,nfr,nvfr,m,itrust=0; ^ ../../../src/tools/gmx_current.c:292:17: warning: unused variable 'f' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c:292:15: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c:292:13: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c: In function 'gmx_current': ../../../src/tools/gmx_current.c:720:15: warning: unused variable 'tfile' [-Wunused-variable] FILE *tfile=NULL; ^ ../../../src/tools/gmx_current.c:719:15: warning: unused variable 'outi' [-Wunused-variable] FILE *outi=NULL; ^ ../../../src/tools/gmx_current.c:716:14: warning: unused variable 'lambda' [-Wunused-variable] real lambda; ^ ../../../src/tools/gmx_current.c:715:13: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_current.c:714:14: warning: unused variable 'step' [-Wunused-variable] int step; ^ ../../../src/tools/gmx_current.c:713:21: warning: unused variable 'l' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:713:17: warning: unused variable 'k' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:713:15: warning: unused variable 'j' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:711:12: warning: unused variable 'natoms' [-Wunused-variable] int natoms; ^ ../../../src/tools/gmx_current.c:707:10: warning: variable 'bNEU' set but not used [-Wunused-but-set-variable] bool bNEU; ^ ../../../src/tools/gmx_current.c:706:13: warning: variable 'bTop' set but not used [-Wunused-but-set-variable] bool bTop; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_current.c:40: ../../../src/tools/gmx_current.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_current.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_current.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_current.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_covar.c: In function 'gmx_covar': ../../../src/tools/gmx_covar.c:120:30: warning: unused variable 'count' [-Wunused-variable] int natoms,nat,ndim,count,nframes0,nframes,nlevels; ^ ../../../src/tools/gmx_covar.c:119:24: warning: unused variable 'step' [-Wunused-variable] int ntopatoms,step; ^ ../../../src/tools/gmx_covar.c:119:14: warning: unused variable 'ntopatoms' [-Wunused-variable] int ntopatoms,step; ^ ../../../src/tools/gmx_covar.c:109:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_covar.c:43: ../../../src/tools/gmx_covar.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_covar.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_covar.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_covar.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_density.lo ../../../src/tools/gmx_density.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_density.c -fPIC -DPIC -o .libs/gmx_density.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_densmap.lo ../../../src/tools/gmx_densmap.c ../../../src/tools/gmx_density.c: In function 'calc_density': ../../../src/tools/gmx_density.c:261:9: warning: unused variable 'buf' [-Wunused-variable] char *buf; /* for tmp. keeping atomname */ ^ ../../../src/tools/gmx_density.c:254:9: warning: unused variable 'j' [-Wunused-variable] i,j,n, /* loop indices */ ^ ../../../src/tools/gmx_density.c:253:9: warning: unused variable 'slCount' [-Wunused-variable] **slCount, /* nr. of atoms in one slice for a group */ ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_density.c:48: ../../../src/tools/gmx_density.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_density.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_density.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_density.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dih.lo ../../../src/tools/gmx_dih.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dielectric.lo ../../../src/tools/gmx_dielectric.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_densmap.c -fPIC -DPIC -o .libs/gmx_densmap.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_kinetics.lo ../../../src/tools/gmx_kinetics.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_densmap.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_densmap.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_densmap.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_densmap.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dielectric.c -fPIC -DPIC -o .libs/gmx_dielectric.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dih.c -fPIC -DPIC -o .libs/gmx_dih.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_spatial.lo ../../../src/tools/gmx_spatial.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dipoles.lo ../../../src/tools/gmx_dipoles.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_kinetics.c -fPIC -DPIC -o .libs/gmx_kinetics.o ../../../src/tools/gmx_dielectric.c: In function 'calc_nbegin': ../../../src/tools/gmx_dielectric.c:60:11: warning: unused variable 'dtt' [-Wunused-variable] real dt,dtt; ^ ../../../src/tools/gmx_dielectric.c:60:8: warning: unused variable 'dt' [-Wunused-variable] real dt,dtt; ^ In file included from ../../../src/tools/gmx_dielectric.c:44:0: ../../../src/tools/gmx_dielectric.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_dielectric.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_dielectric.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dielectric.c:53:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_disre.lo ../../../src/tools/gmx_disre.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dipoles.c -fPIC -DPIC -o .libs/gmx_dipoles.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_spatial.c -fPIC -DPIC -o .libs/gmx_spatial.o In file included from ../../../src/tools/gmx_dih.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dih.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dih.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dih.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_dih.c:55:13: warning: 'dump_dih' defined but not used [-Wunused-function] static void dump_dih(int nframes,char *title,real time[],real dih[]) ^ ../../../src/tools/gmx_kinetics.c: In function 'epnm': ../../../src/tools/gmx_kinetics.c:96:16: warning: unused variable 'ii' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:96:13: warning: unused variable 'ni' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:96:10: warning: unused variable 'nn' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:95:31: warning: unused variable 'to' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c:95:23: warning: unused variable 'from' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c:95:15: warning: unused variable 'buf' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c: In function 'dump_remd_parameters': ../../../src/tools/gmx_kinetics.c:559:8: warning: unused variable 'rhs' [-Wunused-variable] real rhs,tauf,taub,fff,DG; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_kinetics.c:42: ../../../src/tools/gmx_kinetics.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_kinetics.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_kinetics.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_kinetics.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_kinetics.c:85:14: warning: 'itoa' defined but not used [-Wunused-function] static char *itoa(int i) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dist.lo ../../../src/tools/gmx_dist.c ../../../src/tools/gmx_spatial.c: In function 'gmx_spatial': ../../../src/tools/gmx_spatial.c:131:21: warning: unused variable 'shx' [-Wunused-variable] rvec *xtop,*shx[26]; ^ ../../../src/tools/gmx_spatial.c:103:15: warning: unused variable 'bSHIFT' [-Wunused-variable] static bool bSHIFT=FALSE; ^ ../../../src/tools/gmx_spatial.c: At top level: ../../../src/tools/gmx_spatial.c:38:14: warning: 'SRCID_template_c' defined but not used [-Wunused-variable] static char *SRCID_template_c = "$Id$"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_spatial.c:40: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_spatial.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_spatial.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_spatial.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_dipoles.c: In function 'do_gkr': ../../../src/tools/gmx_dipoles.c:156:17: warning: unused variable 'r2' [-Wunused-variable] real qtot,q,r2,cosa,rr,phi; ^ ../../../src/tools/gmx_dipoles.c:155:30: warning: unused variable 'index' [-Wunused-variable] int gi,gj,j0,j1,i,j,k,n,index,grp0,grp1; ^ ../../../src/tools/gmx_dipoles.c: In function 'print_gkrbin': ../../../src/tools/gmx_dipoles.c:291:14: warning: unused variable 'n' [-Wunused-variable] int i,j,n,last; ^ ../../../src/tools/gmx_dipoles.c:291:12: warning: unused variable 'j' [-Wunused-variable] int i,j,n,last; ^ ../../../src/tools/gmx_dipoles.c: In function 'mol_quad': ../../../src/tools/gmx_dipoles.c:418:17: warning: unused variable 'rcom_n' [-Wunused-variable] real rcom_m,rcom_n; ^ ../../../src/tools/gmx_dipoles.c:418:10: warning: unused variable 'rcom_m' [-Wunused-variable] real rcom_m,rcom_n; ^ ../../../src/tools/gmx_dipoles.c: In function 'compute_avercos': ../../../src/tools/gmx_dipoles.c:580:19: warning: unused variable 'n5' [-Wunused-variable] double dc,dc1,d,n5,ddc1,ddc2,ddc3; ^ ../../../src/tools/gmx_dipoles.c:580:13: warning: unused variable 'dc1' [-Wunused-variable] double dc,dc1,d,n5,ddc1,ddc2,ddc3; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_disre.c -fPIC -DPIC -o .libs/gmx_disre.o ../../../src/tools/gmx_dipoles.c: In function 'do_dip': ../../../src/tools/gmx_dipoles.c:872:8: warning: unused variable 'gi' [-Wunused-variable] int gi,ind0,ind1; ^ ../../../src/tools/gmx_dipoles.c:675:27: warning: unused variable 'Vol' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:23: warning: unused variable 'Msq' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:20: warning: unused variable 'Mz' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:17: warning: unused variable 'My' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:14: warning: unused variable 'Mx' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:668:32: warning: unused variable 'lambda' [-Wunused-variable] real rcut=0,t,t0,t1,dt,lambda,dd,rms_cos; ^ ../../../src/tools/gmx_dipoles.c:667:25: warning: unused variable 'buf' [-Wunused-variable] char **enm=NULL,buf[STRLEN]; ^ ../../../src/tools/gmx_dipoles.c:665:44: warning: unused variable 'step' [-Wunused-variable] int *dipole_bin,ndipbin,ibin,iVol,step,idim=-1; ^ ../../../src/tools/gmx_dipoles.c:664:32: warning: unused variable 'nmol' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c:664:18: warning: unused variable 'k' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c:664:16: warning: unused variable 'j' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c: In function 'gmx_dipoles': ../../../src/tools/gmx_dipoles.c:1271:16: warning: unused variable 'bCorr' [-Wunused-variable] bool bCorr,bQuad,bGkr,bMU,bSlab; ^ ../../../src/tools/gmx_dipoles.c:1227:31: warning: unused variable 'bMolCorr' [-Wunused-variable] static bool bAverCorr=FALSE,bMolCorr=FALSE,bPairs=TRUE,bPhi=FALSE; ^ ../../../src/tools/gmx_dipoles.c:1227:15: warning: variable 'bAverCorr' set but not used [-Wunused-but-set-variable] static bool bAverCorr=FALSE,bMolCorr=FALSE,bPairs=TRUE,bPhi=FALSE; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dipoles.c:43: ../../../src/tools/gmx_dipoles.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dipoles.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dipoles.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_dipoles.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dist.c -fPIC -DPIC -o .libs/gmx_dist.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dyndom.lo ../../../src/tools/gmx_dyndom.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_enemat.lo ../../../src/tools/gmx_enemat.c ../../../src/tools/gmx_dist.c: In function 'gmx_dist': ../../../src/tools/gmx_dist.c:101:21: warning: unused variable 'fplt' [-Wunused-variable] FILE *fp=NULL,*fplt=NULL; ^ ../../../src/tools/gmx_dist.c:93:11: warning: unused variable 'aid' [-Wunused-variable] atom_id aid; ^ ../../../src/tools/gmx_dist.c:87:17: warning: unused variable 'v' [-Wunused-variable] rvec *x=NULL,*v=NULL,dx; ^ In file included from ../../../src/tools/gmx_dist.c:45:0: ../../../src/tools/gmx_dist.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dist.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dist.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dist.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_disre.c: In function 'check_viol': ../../../src/tools/gmx_disre.c:144:11: warning: variable 'ener' set but not used [-Wunused-but-set-variable] real ener,rt,mviol,tviol,viol,lam,dvdl,drt; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_enemat.c -fPIC -DPIC -o .libs/gmx_enemat.o ../../../src/tools/gmx_disre.c: In function 'dump_disre_matrix': ../../../src/tools/gmx_disre.c:449:12: warning: unused variable 'iii' [-Wunused-variable] int iii,i,j,nra,nratoms,tp,ri,rj,index,nlabel,label; ^ In file included from ../../../src/tools/gmx_disre.c:44:0: ../../../src/tools/gmx_disre.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_disre.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_disre.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_disre.c:53: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_disre.c:54:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/tools/gmx_disre.c:57:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dyndom.c -fPIC -DPIC -o .libs/gmx_dyndom.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_enemat.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_enemat.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_enemat.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_enemat.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_energy.lo ../../../src/tools/gmx_energy.c ../../../src/tools/gmx_dyndom.c: In function 'rot_conf': ../../../src/tools/gmx_dyndom.c:60:14: warning: unused variable 'j' [-Wunused-variable] int i,j,ai; ^ ../../../src/tools/gmx_dyndom.c:58:43: warning: unused variable 'temp43' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:58:36: warning: unused variable 'temp21' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:58:30: warning: unused variable 'temp4' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:57:49: warning: unused variable 'Tx' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:57:42: warning: unused variable 'Tinvcm' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:57:38: warning: unused variable 'Tcm' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:55:18: warning: unused variable 'center' [-Wunused-variable] rvec arrow,center,xcm; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dyndom.c:41: ../../../src/tools/gmx_dyndom.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_dyndom.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dyndom.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dyndom.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_energy.c -fPIC -DPIC -o .libs/gmx_energy.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_lie.lo ../../../src/tools/gmx_lie.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_filter.lo ../../../src/tools/gmx_filter.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_gyrate.lo ../../../src/tools/gmx_gyrate.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_lie.c -fPIC -DPIC -o .libs/gmx_lie.o ../../../src/tools/gmx_energy.c: In function 'select_by_name': ../../../src/tools/gmx_energy.c:139:8: warning: unused variable 'n' [-Wunused-variable] int n,k,kk,j,i,nmatch,nind,nss; ^ ../../../src/tools/gmx_energy.c: In function 'analyse_ener': ../../../src/tools/gmx_energy.c:529:16: warning: unused variable 'kkk' [-Wunused-variable] int i,j,m,k,kkk; ^ ../../../src/tools/gmx_energy.c:524:30: warning: unused variable 'diffav' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:22: warning: unused variable 'diffsum' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:14: warning: unused variable 'oldfrac' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:8: warning: unused variable 'sfrac' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_h2order.lo ../../../src/tools/gmx_h2order.c ../../../src/tools/gmx_energy.c: In function 'fec': ../../../src/tools/gmx_energy.c:770:8: warning: unused variable 't' [-Wunused-variable] real t, aver, beta; ^ ../../../src/tools/gmx_energy.c:766:22: warning: unused variable 'step' [-Wunused-variable] int nre,timecheck,step,nenergy2,maxenergy; ^ ../../../src/tools/gmx_energy.c:766:8: warning: unused variable 'nre' [-Wunused-variable] int nre,timecheck,step,nenergy2,maxenergy; ^ ../../../src/tools/gmx_energy.c: In function 'gmx_energy': ../../../src/tools/gmx_energy.c:979:16: warning: unused variable 'nms' [-Wunused-variable] char **nms; ^ ../../../src/tools/gmx_energy.c:977:27: warning: unused variable 'enm2' [-Wunused-variable] char **enm=NULL,**enm2=NULL,**leg=NULL,**pairleg,**odtleg,**otenleg; ^ ../../../src/tools/gmx_energy.c:973:42: warning: unused variable 'bEDR' [-Wunused-variable] bool bFoundFirst,bFoundOld,bCont,bEDR,bVisco; ^ ../../../src/tools/gmx_energy.c:959:23: warning: unused variable 'ee' [-Wunused-variable] t_energy *oldee,**ee; ^ ../../../src/tools/gmx_energy.c:953:16: warning: unused variable 'drout' [-Wunused-variable] FILE **drout; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_energy.c:46: ../../../src/tools/gmx_energy.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_energy.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_energy.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_energy.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_energy.c:118:12: warning: 'strcount' defined but not used [-Wunused-function] static int strcount(char *s1,char *s2) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_gyrate.c -fPIC -DPIC -o .libs/gmx_gyrate.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_filter.c -fPIC -DPIC -o .libs/gmx_filter.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_h2order.c -fPIC -DPIC -o .libs/gmx_h2order.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_filter.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_filter.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_filter.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_filter.c:53:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_gyrate.c: In function 'gmx_gyrate': ../../../src/tools/gmx_gyrate.c:190:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_gyrate.c:43: ../../../src/tools/gmx_gyrate.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_gyrate.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_gyrate.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_gyrate.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_lie.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_lie.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_lie.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_lie.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_h2order.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_h2order.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_h2order.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_h2order.c:54: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_hbond.lo ../../../src/tools/gmx_hbond.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_helix.lo ../../../src/tools/gmx_helix.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_mindist.lo ../../../src/tools/gmx_mindist.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_helix.c -fPIC -DPIC -o .libs/gmx_helix.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_hbond.c -fPIC -DPIC -o .libs/gmx_hbond.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_mindist.c -fPIC -DPIC -o .libs/gmx_mindist.o ../../../src/tools/gmx_helix.c: In function 'gmx_helix': ../../../src/tools/gmx_helix.c:213:21: warning: unused variable 'nre' [-Wunused-variable] int natoms,nre,nres,step; ^ In file included from ../../../src/tools/gmx_helix.c:43:0: ../../../src/tools/gmx_helix.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_helix.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_helix.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_helix.c:62:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_mindist.c: In function 'periodic_mindist_plot': ../../../src/tools/gmx_mindist.c:114:10: warning: unused variable 'r' [-Wunused-variable] real r,rmin,rmax,rmint,tmint; ^ ../../../src/tools/gmx_mindist.c: In function 'dist_plot': ../../../src/tools/gmx_mindist.c:245:16: warning: unused variable 'frout' [-Wunused-variable] t_trxframe frout; ^ ../../../src/tools/gmx_mindist.c: In function 'gmx_mindist': ../../../src/tools/gmx_mindist.c:473:15: warning: unused variable 'j' [-Wunused-variable] int i,j,nres=0; ^ ../../../src/tools/gmx_mindist.c:472:14: warning: unused variable 'atm' [-Wunused-variable] FILE *atm; ^ ../../../src/tools/gmx_mindist.c:467:14: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_mindist.c:441:16: warning: unused variable 'bugs' [-Wunused-variable] static char *bugs[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_mindist.c:48: ../../../src/tools/gmx_mindist.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_mindist.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_mindist.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_mindist.c:53: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_msd.lo ../../../src/tools/gmx_msd.c ../../../src/tools/gmx_hbond.c: In function 'mk_hbmap': ../../../src/tools/gmx_hbond.c:182:10: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/tools/gmx_hbond.c: In function 'add_frames': ../../../src/tools/gmx_hbond.c:194:14: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:12: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:10: warning: unused variable 'j' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:8: warning: unused variable 'i' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c: In function 'search_donors': ../../../src/tools/gmx_hbond.c:543:14: warning: unused variable 'stop' [-Wunused-variable] bool stop; ^ ../../../src/tools/gmx_hbond.c:539:22: warning: unused variable 'n' [-Wunused-variable] int i,j,nra,n; ^ ../../../src/tools/gmx_hbond.c:539:18: warning: unused variable 'nra' [-Wunused-variable] int i,j,nra,n; ^ ../../../src/tools/gmx_hbond.c: In function 'is_hbond': ../../../src/tools/gmx_hbond.c:900:19: warning: unused variable 'ihb' [-Wunused-variable] int h,hh,id,ja,ihb; ^ ../../../src/tools/gmx_hbond.c: In function 'merge_hb': ../../../src/tools/gmx_hbond.c:1021:44: warning: unused variable 'ogrp' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c:1021:40: warning: unused variable 'grp' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c:1021:32: warning: unused variable 'm' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c: In function 'do_nhb_dist': ../../../src/tools/gmx_hbond.c:1077:8: warning: unused variable 'nhb' [-Wunused-variable] h_id nhb; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_morph.lo ../../../src/tools/gmx_morph.c ../../../src/tools/gmx_hbond.c: In function 'smooth_tail': ../../../src/tools/gmx_hbond.c:1439:9: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/tools/gmx_hbond.c: In function 'analyse_corr': ../../../src/tools/gmx_hbond.c:1461:56: warning: unused variable 'dt' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:28: warning: unused variable 'dgp' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:25: warning: unused variable 'dg' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:14: warning: variable 'chi22' set but not used [-Wunused-but-set-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c: In function 'do_hbac': ../../../src/tools/gmx_hbond.c:1585:27: warning: variable 'ngh' set but not used [-Wunused-but-set-variable] int nh,nhbonds,nhydro,ngh; ^ ../../../src/tools/gmx_hbond.c:1577:18: warning: unused variable 'nd' [-Wunused-variable] int i,j,k,m,n,nd,ihb,idist,n2,nn; ^ ../../../src/tools/gmx_hbond.c:1577:16: warning: unused variable 'n' [-Wunused-variable] int i,j,k,m,n,nd,ihb,idist,n2,nn; ^ ../../../src/tools/gmx_hbond.c: In function 'gmx_hbond': ../../../src/tools/gmx_hbond.c:2051:30: warning: unused variable 'bin' [-Wunused-variable] int grp,nabin,nrbin,bin,resdist,ihb; ^ ../../../src/tools/gmx_hbond.c:2049:43: warning: unused variable 'was' [-Wunused-variable] bool bSelected,bHBmap,bStop,bTwo,new,was,bBox,bTric; ^ ../../../src/tools/gmx_hbond.c:2049:39: warning: unused variable 'new' [-Wunused-variable] bool bSelected,bHBmap,bStop,bTwo,new,was,bBox,bTric; ^ ../../../src/tools/gmx_hbond.c:2045:34: warning: unused variable 'ja' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:31: warning: unused variable 'id' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:27: warning: unused variable 'end' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:21: warning: unused variable 'start' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:19: warning: unused variable 'l' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_hbond.c:42: ../../../src/tools/gmx_hbond.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_hbond.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_hbond.c:53: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_hbond.c:53:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.h:40, from ../../../src/tools/gmx_hbond.c:59: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/tools/gmx_hbond.c:372:13: warning: 'in_list' defined but not used [-Wunused-function] static bool in_list(atom_id selection,int isize,atom_id *index) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmeig.lo ../../../src/tools/gmx_nmeig.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmens.lo ../../../src/tools/gmx_nmens.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_msd.c -fPIC -DPIC -o .libs/gmx_msd.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_morph.c -fPIC -DPIC -o .libs/gmx_morph.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmens.c -fPIC -DPIC -o .libs/gmx_nmens.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmeig.c -fPIC -DPIC -o .libs/gmx_nmeig.o ../../../src/tools/gmx_nmeig.c: In function 'nma_full_hessian': ../../../src/tools/gmx_nmeig.c:76:19: warning: unused variable 'rdum' [-Wunused-variable] real mass_fac,rdum; ^ ../../../src/tools/gmx_nmeig.c: In function 'gmx_nmeig': ../../../src/tools/gmx_nmeig.c:229:15: warning: unused variable 'index' [-Wunused-variable] atom_id *index; ^ ../../../src/tools/gmx_nmeig.c:227:24: warning: unused variable 'gnx' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:227:22: warning: unused variable 'd' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:227:20: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:226:15: warning: unused variable 'grpname' [-Wunused-variable] char *grpname,title[256]; ^ ../../../src/tools/gmx_nmeig.c:225:36: warning: unused variable 'count' [-Wunused-variable] int natoms,ndim,nrow,ncol,count; ^ ../../../src/tools/gmx_nmeig.c:224:19: warning: unused variable 'mass_fac' [-Wunused-variable] real rdum,mass_fac; ^ ../../../src/tools/gmx_nmeig.c:224:14: warning: unused variable 'rdum' [-Wunused-variable] real rdum,mass_fac; ^ ../../../src/tools/gmx_nmeig.c:217:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_nmeig.c:217:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmeig.c:43: ../../../src/tools/gmx_nmeig.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmeig.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmeig.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmeig.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_msd.c: In function 'printmol': ../../../src/tools/gmx_nmens.c: In function 'gmx_nmens': ../../../src/tools/gmx_nmens.c:105:14: warning: unused variable 'eigvalnr' [-Wunused-variable] int * eigvalnr; ^ ../../../src/tools/gmx_nmens.c:104:19: warning: unused variable 'invfr' [-Wunused-variable] real rfac,invfr,rhalf,jr; ^ ../../../src/tools/gmx_nmens.c:99:21: warning: unused variable 'neigval' [-Wunused-variable] int natoms,neigval; ^ ../../../src/tools/gmx_nmens.c:98:22: warning: unused variable 'totmass' [-Wunused-variable] real *eigval,totmass,*invsqrtm,t,disp; ^ ../../../src/tools/gmx_nmens.c:89:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_nmens.c:89:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmens.c:43: ../../../src/tools/gmx_nmens.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmens.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmens.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmens.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_nmens.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/tools/gmx_msd.c:455:13: warning: unused variable 'r' [-Wunused-variable] real a,b,r,D,Dav,D2av,VarD,sqrtD,sqrtD_max,scale; ^ ../../../src/tools/gmx_msd.c:452:14: warning: unused variable 'out_pdb' [-Wunused-variable] FILE *out,out_pdb; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_msd.c:47: ../../../src/tools/gmx_msd.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_msd.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_msd.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_msd.c:144:13: warning: 'done_corr' defined but not used [-Wunused-function] static void done_corr(t_corr *this) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_morph.c:40: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_morph.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_order.lo ../../../src/tools/gmx_order.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_principal.lo ../../../src/tools/gmx_principal.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_polystat.lo ../../../src/tools/gmx_polystat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_order.c -fPIC -DPIC -o .libs/gmx_order.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_principal.c -fPIC -DPIC -o .libs/gmx_principal.o ../../../src/tools/gmx_principal.c: In function 'gmx_principal': ../../../src/tools/gmx_principal.c:97:20: warning: unused variable 'a3' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:97:17: warning: unused variable 'a2' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:97:14: warning: unused variable 'a1' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:95:28: warning: unused variable 'mol' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:24: warning: unused variable 'nam' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:18: warning: unused variable 'm' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:16: warning: unused variable 'j' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_principal.c:43: ../../../src/tools/gmx_principal.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_principal.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_principal.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_principal.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../src/tools/gmx_msd.c: In function 'corr_loop': ../../../include/vec.h:325:4: warning: '*((void *)&com+16)' may be used uninitialized in this function [-Wmaybe-uninitialized] z=a[ZZ]-b[ZZ]; ^ ../../../src/tools/gmx_msd.c:525:29: note: '*((void *)&com+16)' was declared here rvec *x[2],*xa[2],com; ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:324:4: warning: '*((void *)&com+8)' may be used uninitialized in this function [-Wmaybe-uninitialized] y=a[YY]-b[YY]; ^ ../../../src/tools/gmx_msd.c:525:29: note: '*((void *)&com+8)' was declared here rvec *x[2],*xa[2],com; ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:323:4: warning: 'com' may be used uninitialized in this function [-Wmaybe-uninitialized] x=a[XX]-b[XX]; ^ ../../../src/tools/gmx_msd.c:525:29: note: 'com' was declared here rvec *x[2],*xa[2],com; ^ ../../../src/tools/gmx_order.c: In function 'find_nearest_neighbours': ../../../src/tools/gmx_order.c:86:12: warning: unused variable 'nnb' [-Wunused-variable] int **nnb; ^ ../../../src/tools/gmx_order.c:85:14: warning: unused variable 'mm' [-Wunused-variable] int m1,mm; ^ ../../../src/tools/gmx_order.c:85:11: warning: unused variable 'm1' [-Wunused-variable] int m1,mm; ^ ../../../src/tools/gmx_order.c:84:12: warning: unused variable 'd' [-Wunused-variable] t_dist *d; ^ ../../../src/tools/gmx_order.c:83:12: warning: unused variable 'dmat' [-Wunused-variable] t_mat *dmat; ^ ../../../src/tools/gmx_order.c:80:18: warning: unused variable 'dx2' [-Wunused-variable] rvec dx,dx1,dx2,rj,rk,urk,urj; ^ ../../../src/tools/gmx_order.c:80:14: warning: unused variable 'dx1' [-Wunused-variable] rvec dx,dx1,dx2,rj,rk,urk,urj; ^ ../../../src/tools/gmx_order.c:79:14: warning: unused variable 'i2' [-Wunused-variable] int i1,i2,i,ibin,j,k,l,n,*nn[4]; ^ ../../../src/tools/gmx_order.c:79:11: warning: unused variable 'i1' [-Wunused-variable] int i1,i2,i,ibin,j,k,l,n,*nn[4]; ^ ../../../src/tools/gmx_order.c:77:11: warning: unused variable 'fnsgdist' [-Wunused-variable] char fnsgdist[32]; ^ ../../../src/tools/gmx_order.c:76:12: warning: unused variable 'fpoutdist' [-Wunused-variable] FILE *fpoutdist; ^ ../../../src/tools/gmx_order.c: In function 'calc_tetra_order_parm': ../../../src/tools/gmx_order.c:228:14: warning: unused variable 'i' [-Wunused-variable] int i,*isize,ng,nframes; ^ ../../../src/tools/gmx_order.c:219:39: warning: unused variable 'subtitle' [-Wunused-variable] char title[STRLEN],fn[STRLEN],subtitle[STRLEN]; ^ ../../../src/tools/gmx_order.c:219:28: warning: unused variable 'fn' [-Wunused-variable] char title[STRLEN],fn[STRLEN],subtitle[STRLEN]; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_potential.lo ../../../src/tools/gmx_potential.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_polystat.c -fPIC -DPIC -o .libs/gmx_polystat.o ../../../src/tools/gmx_order.c: In function 'calc_order': ../../../src/tools/gmx_order.c:315:9: warning: unused variable 'dbangle' [-Wunused-variable] real dbangle = 0, /* angle between double bond and axis */ ^ ../../../src/tools/gmx_order.c:311:13: warning: unused variable 'l' [-Wunused-variable] i,j,m,k,l,teller = 0, ^ ../../../src/tools/gmx_order.c: In function 'gmx_order': ../../../src/tools/gmx_order.c:556:13: warning: unused variable 'i' [-Wunused-variable] i, ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_order.c:48: ../../../src/tools/gmx_order.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_order.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_order.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_order.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rama.lo ../../../src/tools/gmx_rama.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_potential.c -fPIC -DPIC -o .libs/gmx_potential.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rama.c -fPIC -DPIC -o .libs/gmx_rama.o ../../../src/tools/gmx_potential.c: In function 'calc_potential': ../../../src/tools/gmx_potential.c:108:9: warning: unused variable 'j' [-Wunused-variable] i,j,n, /* loop indices */ ^ ../../../src/tools/gmx_potential.c:107:9: warning: unused variable 'slCount' [-Wunused-variable] **slCount, /* nr. of atoms in one slice for a group */ ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_potential.c:50: ../../../src/tools/gmx_potential.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_potential.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_potential.c:53:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_potential.c:55: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rdf.lo ../../../src/tools/gmx_rdf.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_polystat.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_polystat.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_polystat.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_polystat.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rdf.c -fPIC -DPIC -o .libs/gmx_rdf.o ../../../src/tools/gmx_rdf.c: In function 'do_rdf': ../../../src/tools/gmx_rdf.c:168:23: warning: unused variable 'index_cm' [-Wunused-variable] atom_id **index,*index_cm=NULL; ^ ../../../src/tools/gmx_rdf.c:167:21: warning: unused variable 'isize_cm' [-Wunused-variable] int *isize,isize_cm=0,nrdf=0,max_i,isize0,isize_g; ^ ../../../src/tools/gmx_rdf.c:164:40: warning: unused variable 'n' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:164:37: warning: unused variable 'j1' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:164:34: warning: unused variable 'j0' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:162:28: warning: unused variable 'outf2' [-Wunused-variable] char outf1[STRLEN],outf2[STRLEN]; ^ ../../../src/tools/gmx_rdf.c:162:14: warning: unused variable 'outf1' [-Wunused-variable] char outf1[STRLEN],outf2[STRLEN]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rdf.c:47: ../../../src/tools/gmx_rdf.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rdf.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rdf.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rdf.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/fftgrid.h:46:0, from ../../../src/tools/gmx_rdf.c:57: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rama.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rama.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rama.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rama.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rms.lo ../../../src/tools/gmx_rms.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rmsdist.lo ../../../src/tools/gmx_rmsdist.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rmsf.lo ../../../src/tools/gmx_rmsf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rotacf.lo ../../../src/tools/gmx_rotacf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rms.c -fPIC -DPIC -o .libs/gmx_rms.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rmsdist.c -fPIC -DPIC -o .libs/gmx_rmsdist.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rmsf.c -fPIC -DPIC -o .libs/gmx_rmsf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rotacf.c -fPIC -DPIC -o .libs/gmx_rotacf.o In file included from ../../../src/tools/gmx_rms.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rms.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rms.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rms.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_rmsdist.c: In function 'analyze_noe_equivalent': ../../../src/tools/gmx_rmsdist.c:249:11: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/tools/gmx_rmsf.c: In function 'gmx_rmsf': ../../../src/tools/gmx_rmsdist.c: In function 'gmx_rmsdist': ../../../src/tools/gmx_rmsdist.c:534:36: warning: unused variable 'gj' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ ../../../src/tools/gmx_rmsdist.c:534:33: warning: unused variable 'gi' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ ../../../src/tools/gmx_rmsdist.c:534:24: warning: unused variable 'j' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ In file included from ../../../src/tools/gmx_rmsdist.c:47:0: ../../../src/tools/gmx_rmsdist.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_rmsf.c:211:16: warning: unused variable 'buf' [-Wunused-variable] char buf[256],*label; ^ ../../../src/tools/gmx_rmsf.c:210:33: warning: unused variable 'res0' [-Wunused-variable] int status,npdbatoms,res0; ^ ../../../src/tools/gmx_rmsf.c:206:16: warning: unused variable 'bCont' [-Wunused-variable] bool bCont; ^ ../../../src/tools/gmx_rmsf.c:202:16: warning: unused variable 'ir' [-Wunused-variable] t_inputrec ir; ^ ../../../src/tools/gmx_rmsf.c:201:16: warning: unused variable 'header' [-Wunused-variable] t_tpxheader header; ^ ../../../src/tools/gmx_rmsf.c:199:33: warning: unused variable 'w_rms' [-Wunused-variable] real t,lambda,*w_rls,*w_rms; ^ ../../../src/tools/gmx_rmsf.c:199:18: warning: unused variable 'lambda' [-Wunused-variable] real t,lambda,*w_rls,*w_rms; ^ ../../../src/tools/gmx_rmsf.c:198:40: warning: unused variable 'g' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:31: warning: unused variable 'natoms' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:21: warning: unused variable 'nre' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:16: warning: unused variable 'step' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rmsdist.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rmsdist.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rmsdist.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_rmsf.c:189:39: warning: unused variable 'bdevX' [-Wunused-variable] static bool bRes=FALSE,bAniso=FALSE,bdevX=FALSE,bFit=TRUE; ^ In file included from ../../../src/tools/gmx_rmsf.c:45:0: ../../../src/tools/gmx_rmsf.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rmsf.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rmsf.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rmsf.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rmsf.c:50:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_saltbr.lo ../../../src/tools/gmx_saltbr.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sas.lo ../../../src/tools/gmx_sas.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rotacf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_rotacf.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rotacf.c:54: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rotacf.c:54:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_saltbr.c -fPIC -DPIC -o .libs/gmx_saltbr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sas.c -fPIC -DPIC -o .libs/gmx_sas.o ../../../src/tools/gmx_sas.c: In function 'sas_plot': ../../../src/tools/gmx_sas.c:369:12: warning: unused variable 'mm' [-Wunused-variable] real mm; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sas.c:47: ../../../src/tools/gmx_sas.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sas.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sas.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sas.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_sas.c:55:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/tools/gmx_saltbr.c: In function 'gmx_saltbr': ../../../src/tools/gmx_saltbr.c:163:14: warning: unused variable 'label' [-Wunused-variable] char label[234]; ^ ../../../src/tools/gmx_saltbr.c:162:17: warning: unused variable 'dt' [-Wunused-variable] double t0,dt; ^ ../../../src/tools/gmx_saltbr.c:162:14: warning: unused variable 't0' [-Wunused-variable] double t0,dt; ^ ../../../src/tools/gmx_saltbr.c:156:50: warning: unused variable 'n3' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ ../../../src/tools/gmx_saltbr.c:156:47: warning: unused variable 'n2' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ ../../../src/tools/gmx_saltbr.c:156:44: warning: unused variable 'n1' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_saltbr.c:43: ../../../src/tools/gmx_saltbr.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_saltbr.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_saltbr.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_saltbr.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sdf.lo ../../../src/tools/gmx_sdf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sgangle.lo ../../../src/tools/gmx_sgangle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sdf.c -fPIC -DPIC -o .libs/gmx_sdf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sgangle.c -fPIC -DPIC -o .libs/gmx_sgangle.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sorient.lo ../../../src/tools/gmx_sorient.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_spol.lo ../../../src/tools/gmx_spol.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sgangle.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sgangle.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sgangle.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sgangle.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/gmx_sdf.c: In function 'do_sdf': ../../../src/tools/gmx_sdf.c:101:25: warning: unused variable 'bRefDone' [-Wunused-variable] bool bTop=FALSE,bRefDone=FALSE,bInGroup=FALSE; ^ ../../../src/tools/gmx_sdf.c:97:17: warning: unused variable 'jx' [-Wunused-variable] atom_id ix,jx; ^ ../../../src/tools/gmx_sdf.c:97:14: warning: unused variable 'ix' [-Wunused-variable] atom_id ix,jx; ^ ../../../src/tools/gmx_sdf.c:92:17: warning: unused variable 'xcog' [-Wunused-variable] rvec *x,xcog,dx,*x_i1,xi,*x_refmol; ^ ../../../src/tools/gmx_sdf.c:89:23: warning: variable 'hbox' set but not used [-Wunused-but-set-variable] real t,boxmin,hbox,normfac; ^ ../../../src/tools/gmx_sdf.c:88:15: warning: unused variable 'index_ref' [-Wunused-variable] atom_id *index_ref=NULL; ^ ../../../src/tools/gmx_sdf.c:87:15: warning: unused variable 'index_cg' [-Wunused-variable] atom_id *index_cg=NULL; ^ ../../../src/tools/gmx_sdf.c:85:24: warning: unused variable 'refc' [-Wunused-variable] int nrefmol=0,refc=0; ^ ../../../src/tools/gmx_sdf.c:83:14: warning: unused variable 'isize_ref' [-Wunused-variable] int isize_ref=3; ^ ../../../src/tools/gmx_sdf.c:82:14: warning: unused variable 'isize_cg' [-Wunused-variable] int isize_cg=0; ^ ../../../src/tools/gmx_sdf.c:75:41: warning: unused variable 'dest' [-Wunused-variable] int ng,natoms,i,j,k,l,X,Y,Z,lc,dest; ^ ../../../src/tools/gmx_sdf.c:75:38: warning: unused variable 'lc' [-Wunused-variable] int ng,natoms,i,j,k,l,X,Y,Z,lc,dest; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sorient.c -fPIC -DPIC -o .libs/gmx_sorient.o ../../../src/tools/gmx_sdf.c: At top level: ../../../src/tools/gmx_sdf.c:20:14: warning: 'SRCID_template_c' defined but not used [-Wunused-variable] static char *SRCID_template_c = "$Id$"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sdf.c:28: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sdf.c:28:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_spol.c -fPIC -DPIC -o .libs/gmx_spol.o ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sdf.c:31:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sdf.c:33: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/gmx_sorient.c: In function 'gmx_sorient': ../../../src/tools/gmx_sorient.c:114:72: warning: unused variable 'mtot' [-Wunused-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:114:67: warning: unused variable 'mass' [-Wunused-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:114:20: warning: variable 'two_pi' set but not used [-Wunused-but-set-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:108:13: warning: unused variable 'j' [-Wunused-variable] int i,j,p,sa0,sa1,sa2,n,ntot,nf,m,*hist1,*hist2,*histn,nbin1,nbin2,nrbin; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sorient.c:41: ../../../src/tools/gmx_sorient.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_sorient.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sorient.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sorient.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_tcaf.lo ../../../src/tools/gmx_tcaf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_tcaf.c -fPIC -DPIC -o .libs/gmx_tcaf.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_traj.lo ../../../src/tools/gmx_traj.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_velacc.lo ../../../src/tools/gmx_velacc.c ../../../src/tools/gmx_spol.c: In function 'gmx_spol': ../../../src/tools/gmx_spol.c:165:28: warning: unused variable 'bPBC' [-Wunused-variable] static bool bCom = FALSE,bPBC = FALSE; ^ ../../../src/tools/gmx_spol.c:131:13: warning: unused variable 'xtop' [-Wunused-variable] rvec *xtop,*x,xref,try,dx,dip,dir; ^ ../../../src/tools/gmx_spol.c:127:12: warning: unused variable 'title' [-Wunused-variable] char title[STRLEN]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_spol.c:41: ../../../src/tools/gmx_spol.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_spol.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_spol.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_spol.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_velacc.c -fPIC -DPIC -o .libs/gmx_velacc.o In file included from ../../../src/tools/gmx_velacc.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_velacc.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_velacc.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_velacc.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_traj.c -fPIC -DPIC -o .libs/gmx_traj.o ../../../src/tools/gmx_tcaf.c: In function 'gmx_tcaf': ../../../src/tools/gmx_tcaf.c:274:16: warning: unused variable 'c1' [-Wunused-variable] real **c1,**tc; ^ ../../../src/tools/gmx_tcaf.c:265:14: warning: unused variable 'bTPS' [-Wunused-variable] bool bTPS,bTop; /* ,bCubic; */ ^ In file included from ../../../src/tools/gmx_tcaf.c:43:0: ../../../src/tools/gmx_tcaf.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_tcaf.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_tcaf.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_tcaf.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_helixorient.lo ../../../src/tools/gmx_helixorient.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_clustsize.lo ../../../src/tools/gmx_clustsize.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_clustsize.c -fPIC -DPIC -o .libs/gmx_clustsize.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_mdmat.lo ../../../src/tools/gmx_mdmat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_helixorient.c -fPIC -DPIC -o .libs/gmx_helixorient.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_mdmat.c -fPIC -DPIC -o .libs/gmx_mdmat.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wham.lo ../../../src/tools/gmx_wham.c ../../../src/tools/gmx_mdmat.c: In function 'gmx_mdmat': ../../../src/tools/gmx_mdmat.c:193:14: warning: unused variable 'nr0' [-Wunused-variable] int nr0; ^ ../../../src/tools/gmx_mdmat.c:192:45: warning: unused variable 'it' [-Wunused-variable] int i,j,status,nres,natoms,nframes,it,trxnat; ^ ../../../src/tools/gmx_mdmat.c:165:15: warning: unused variable 'bAtom' [-Wunused-variable] static bool bAtom=FALSE; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_mdmat.c:44: ../../../src/tools/gmx_mdmat.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ ../../../src/tools/gmx_clustsize.c: In function 'clust_size': In file included from ../../../src/tools/gmx_mdmat.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_mdmat.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/gmx_clustsize.c:94:50: warning: unused variable 'n_y' [-Wunused-variable] int i,j,k,ai,aj,ak,ci,cj,nframe,nclust,n_x,n_y,max_size=0; ^ ../../../src/tools/gmx_clustsize.c:94:23: warning: unused variable 'ak' [-Wunused-variable] int i,j,k,ai,aj,ak,ci,cj,nframe,nclust,n_x,n_y,max_size=0; ^ ../../../src/tools/gmx_clustsize.c:89:40: warning: unused variable 'nsame' [-Wunused-variable] int version,generation,sss,ii,jj,nsame; ^ In file included from ../../../src/tools/gmx_mdmat.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_clustsize.c: In function 'gmx_clustsize': ../../../src/tools/gmx_clustsize.c:396:18: warning: unused variable 'bRDF' [-Wunused-variable] bool bSQ,bRDF; ^ ../../../src/tools/gmx_clustsize.c:396:14: warning: unused variable 'bSQ' [-Wunused-variable] bool bSQ,bRDF; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_clustsize.c:47: ../../../src/tools/gmx_clustsize.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_clustsize.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_clustsize.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_clustsize.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/pme.h:46:0, from ../../../src/tools/gmx_clustsize.c:62: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/tools/gmx_traj.c: In function 'write_pdb_bfac': ../../../src/tools/gmx_traj.c:337:11: warning: unused variable 'bOne' [-Wunused-variable] bool bOne; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_wham.c -fPIC -DPIC -o .libs/gmx_wham.o ../../../src/tools/gmx_traj.c: In function 'gmx_traj': ../../../src/tools/gmx_traj.c:525:18: warning: unused variable 'n' [-Wunused-variable] int i,j,n; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_traj.c:42: ../../../src/tools/gmx_traj.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_traj.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_traj.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_traj.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o correl.lo ../../../src/tools/correl.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_wham.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_wham.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_wham.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_wham.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sham.lo ../../../src/tools/gmx_sham.c ../../../src/tools/gmx_helixorient.c: In function 'gmx_helixorient': ../../../src/tools/gmx_helixorient.c:125:14: warning: unused variable 'rotangle' [-Wunused-variable] real tmp,rotangle; ^ ../../../src/tools/gmx_helixorient.c:107:10: warning: unused variable 'axes' [-Wunused-variable] rvec axes[3]; ^ ../../../src/tools/gmx_helixorient.c:106:10: warning: unused variable 'axes_t0' [-Wunused-variable] rvec axes_t0[3]; ^ ../../../src/tools/gmx_helixorient.c:93:27: warning: unused variable 'vproj' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:22: warning: unused variable 'vtmp' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:19: warning: unused variable 'p2' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:16: warning: unused variable 'p1' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:92:10: warning: unused variable 'averageaxis' [-Wunused-variable] rvec averageaxis; ^ ../../../src/tools/gmx_helixorient.c:86:9: warning: unused variable 'd' [-Wunused-variable] int d,i,j,teller=0; ^ ../../../src/tools/gmx_helixorient.c:80:18: warning: unused variable 'dx' [-Wunused-variable] rvec *x=NULL,dx; ^ In file included from ../../../src/tools/gmx_helixorient.c:45:0: ../../../src/tools/gmx_helixorient.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_helixorient.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_helixorient.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_helixorient.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmtraj.lo ../../../src/tools/gmx_nmtraj.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/correl.c -fPIC -DPIC -o .libs/correl.o ../../../src/tools/correl.c: In function 'complex_mult': ../../../src/tools/correl.c:189:10: warning: unused variable 'no2' [-Wunused-variable] int i,no2,n_2,k; ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.c:43: ../../../src/tools/correl.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sham.c -fPIC -DPIC -o .libs/gmx_sham.o ../../../src/tools/gmx_sham.c: In function 'do_sham': ../../../src/tools/gmx_sham.c:286:32: warning: unused variable 'd' [-Wunused-variable] int i,j,k,imin,len,index,d,*nbin,*bindex,bi; ^ ../../../src/tools/gmx_sham.c: In function 'gmx_sham': ../../../src/tools/gmx_sham.c:778:41: warning: unused variable 'db' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:36: warning: unused variable 'cum4' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:31: warning: unused variable 'cum3' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:26: warning: unused variable 'cum2' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:21: warning: unused variable 'cum1' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:17: warning: unused variable 'sig' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:13: warning: unused variable 'av' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:776:66: warning: unused variable 'error' [-Wunused-variable] real **val,**et_val,**dt_val,*t,*e_t,e_dt,d_dt,*d_t,dt,tot,error; ^ ../../../src/tools/gmx_sham.c:776:62: warning: unused variable 'tot' [-Wunused-variable] real **val,**et_val,**dt_val,*t,*e_t,e_dt,d_dt,*d_t,dt,tot,error; ^ ../../../src/tools/gmx_sham.c:775:51: warning: unused variable 'j' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:775:28: warning: unused variable 's' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:775:22: warning: unused variable 'nlast' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:774:13: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ ../../../src/tools/gmx_sham.c:728:35: warning: unused variable 'resol' [-Wunused-variable] static int nsets_in=1,nb_min=4,resol=10,nlevels=25; ^ ../../../src/tools/gmx_sham.c:728:26: warning: unused variable 'nb_min' [-Wunused-variable] static int nsets_in=1,nb_min=4,resol=10,nlevels=25; ^ ../../../src/tools/gmx_sham.c:723:15: warning: unused variable 'bShamEner' [-Wunused-variable] static bool bShamEner=TRUE,bSham=TRUE; ^ ../../../src/tools/gmx_sham.c:722:56: warning: unused variable 'bPower' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:41: warning: unused variable 'bEeFitAc' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:28: warning: unused variable 'bEENLC' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:15: warning: unused variable 'bEESEF' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:721:66: warning: unused variable 'bXYdy' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:721:50: warning: unused variable 'bAverCorr' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:721:38: warning: unused variable 'bSubAv' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:720:36: warning: unused variable 'filtlen' [-Wunused-variable] static real tb=-1,te=-1,frac=0.5,filtlen=0,binwidth=0.1; ^ ../../../src/tools/gmx_sham.c:720:27: warning: unused variable 'frac' [-Wunused-variable] static real tb=-1,te=-1,frac=0.5,filtlen=0,binwidth=0.1; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sham.c:41: ../../../src/tools/gmx_sham.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sham.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sham.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sham.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_sham.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjconv.lo ../../../src/tools/gmx_trjconv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmtraj.c -fPIC -DPIC -o .libs/gmx_nmtraj.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjcat.lo ../../../src/tools/gmx_trjcat.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjorder.lo ../../../src/tools/gmx_trjorder.c ../../../src/tools/gmx_nmtraj.c: In function 'gmx_nmtraj': ../../../src/tools/gmx_nmtraj.c:129:14: warning: variable 'dum' set but not used [-Wunused-but-set-variable] real dum; ^ ../../../src/tools/gmx_nmtraj.c:124:14: warning: unused variable 'found' [-Wunused-variable] bool found; ^ ../../../src/tools/gmx_nmtraj.c:123:25: warning: unused variable 'sum' [-Wunused-variable] real omega,Ekin,sum,m,vel; ^ ../../../src/tools/gmx_nmtraj.c:121:15: warning: unused variable 'out_eigval' [-Wunused-variable] real *out_eigval; ^ ../../../src/tools/gmx_nmtraj.c:115:14: warning: unused variable 'neigval' [-Wunused-variable] int neigval; ^ ../../../src/tools/gmx_nmtraj.c:113:14: warning: unused variable 'grpname' [-Wunused-variable] char * grpname; ^ ../../../src/tools/gmx_nmtraj.c:111:14: warning: unused variable 'indexfile' [-Wunused-variable] char * indexfile; ^ ../../../src/tools/gmx_nmtraj.c:109:30: warning: unused variable 'v' [-Wunused-variable] int i,j,k,kmode,d,s,v; ^ ../../../src/tools/gmx_nmtraj.c:109:28: warning: unused variable 's' [-Wunused-variable] int i,j,k,kmode,d,s,v; ^ ../../../src/tools/gmx_nmtraj.c:105:15: warning: unused variable 'eigvalnr' [-Wunused-variable] int *eigvalnr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmtraj.c:43: ../../../src/tools/gmx_nmtraj.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmtraj.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmtraj.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmtraj.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_nmtraj.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjconv.c -fPIC -DPIC -o .libs/gmx_trjconv.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjcat.c -fPIC -DPIC -o .libs/gmx_trjcat.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjorder.c -fPIC -DPIC -o .libs/gmx_trjorder.o ../../../src/tools/gmx_trjconv.c: In function 'calc_pbc_cluster': ../../../src/tools/gmx_trjconv.c:89:34: warning: unused variable 'is' [-Wunused-variable] int m,i,j,j0,j1,jj,ai,iter,is; ^ ../../../src/tools/gmx_trjconv.c: In function 'put_molecule_com_in_box': ../../../src/tools/gmx_trjconv.c:252:29: warning: unused variable 'dx' [-Wunused-variable] rvec com,new_com,shift,dx,box_center; ^ ../../../src/tools/gmx_trjconv.c: In function 'put_residue_com_in_box': ../../../src/tools/gmx_trjconv.c:303:37: warning: variable 'res_nat' set but not used [-Wunused-but-set-variable] atom_id i, j, res_start, res_end, res_nat; ^ ../../../src/tools/gmx_trjconv.c: In function 'gmx_trjconv': ../../../src/tools/gmx_trjconv.c:726:16: warning: unused variable 'xdr' [-Wunused-variable] int xdr=0; ^ ../../../src/tools/gmx_trjconv.c:725:42: warning: unused variable 'command' [-Wunused-variable] char top_title[256],title[256],command[256],filemode[5]; ^ ../../../src/tools/gmx_trjconv.c:715:21: warning: variable 'bFitXY' set but not used [-Wunused-but-set-variable] bool bFit,bFitXY,bPFit,bReset; ^ ../../../src/tools/gmx_trjconv.c:707:25: warning: unused variable 'gn_rms' [-Wunused-variable] char *gn_fit,*gn_rms; ^ ../../../src/tools/gmx_trjconv.c:706:26: warning: unused variable 'ind_rms' [-Wunused-variable] atom_id *ind_fit,*ind_rms; ^ ../../../src/tools/gmx_trjconv.c:705:21: warning: unused variable 'irms' [-Wunused-variable] int ifit,irms,my_clust=-1; ^ ../../../src/tools/gmx_trjconv.c:695:55: warning: unused variable 'nre' [-Wunused-variable] int m,i,d,frame,outframe,natoms,nout,ncent,nre,newstep=0,model_nr; ^ ../../../src/tools/gmx_trjconv.c:694:23: warning: unused variable 'lambda' [-Wunused-variable] real xtcpr, lambda,*w_rls=NULL; ^ ../../../src/tools/gmx_trjconv.c:694:16: warning: unused variable 'xtcpr' [-Wunused-variable] real xtcpr, lambda,*w_rls=NULL; ^ ../../../src/tools/gmx_trjconv.c:693:49: warning: unused variable 'dx' [-Wunused-variable] rvec *xp=NULL,x_shift,hbox,box_center,dx; ^ ../../../src/tools/gmx_trjconv.c:693:38: warning: unused variable 'box_center' [-Wunused-variable] rvec *xp=NULL,x_shift,hbox,box_center,dx; ^ In file included from ../../../src/tools/gmx_trjconv.c:47:0: ../../../src/tools/gmx_trjconv.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjconv.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_trjconv.c:53:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjconv.c:57: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjconv.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_trjcat.c: In function 'scan_trj_files': ../../../src/tools/gmx_trjcat.c:78:8: warning: unused variable 't' [-Wunused-variable] real t; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_xpm2ps.lo ../../../src/tools/gmx_xpm2ps.c ../../../src/tools/gmx_trjcat.c: In function 'gmx_trjcat': ../../../src/tools/gmx_trjcat.c:392:58: warning: unused variable 'last_ok_step' [-Wunused-variable] int earliersteps,nfile_in,nfile_out,*cont_type,last_ok_step; ^ ../../../src/tools/gmx_trjcat.c:388:34: warning: unused variable 'in_file' [-Wunused-variable] char **fnms,**fnms_out,*in_file,*out_file; ^ ../../../src/tools/gmx_trjcat.c:385:19: warning: unused variable 'v' [-Wunused-variable] rvec *x,*v; ^ ../../../src/tools/gmx_trjcat.c:385:16: warning: unused variable 'x' [-Wunused-variable] rvec *x,*v; ^ ../../../src/tools/gmx_trjcat.c:384:53: warning: unused variable 'trjout' [-Wunused-variable] int status,ftpin,i,frame,frame_out,step=0,trjout=0; ^ ../../../src/tools/gmx_trjcat.c:384:22: warning: unused variable 'ftpin' [-Wunused-variable] int status,ftpin,i,frame,frame_out,step=0,trjout=0; ^ In file included from ../../../src/tools/gmx_trjcat.c:46:0: ../../../src/tools/gmx_trjcat.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjcat.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_trjcat.c:52:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjcat.c:56: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjcat.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjorder.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjorder.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjorder.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_trjorder.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_editconf.lo ../../../src/tools/gmx_editconf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_xpm2ps.c -fPIC -DPIC -o .libs/gmx_xpm2ps.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_editconf.c -fPIC -DPIC -o .libs/gmx_editconf.o ../../../src/tools/gmx_editconf.c: In function 'calc_geom': ../../../src/tools/gmx_editconf.c:103:12: warning: unused variable 'grpnames' [-Wunused-variable] char *grpnames; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genbox.lo ../../../src/tools/gmx_genbox.c ../../../src/tools/gmx_editconf.c: In function 'set_pdb_conf_bfac': ../../../src/tools/gmx_editconf.c:195:9: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genion.lo ../../../src/tools/gmx_genion.c ../../../src/tools/gmx_editconf.c: In function 'gmx_editconf': ../../../src/tools/gmx_editconf.c:518:35: warning: unused variable 'zcent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:29: warning: unused variable 'ycent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:23: warning: unused variable 'xcent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:20: warning: unused variable 'zs' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:17: warning: unused variable 'ys' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:14: warning: unused variable 'xs' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:516:38: warning: unused variable 'bCubic' [-Wunused-variable] bool bIndex,bSetSize,bSetAng,bCubic,bDist,bSetCenter; ^ ../../../src/tools/gmx_editconf.c:512:30: warning: unused variable 'tindex' [-Wunused-variable] atom_id *index,*sindex,*tindex; ^ ../../../src/tools/gmx_editconf.c:511:26: warning: unused variable 'tsize' [-Wunused-variable] int isize,ssize,tsize; ^ ../../../src/tools/gmx_editconf.c:456:33: warning: unused variable 'to_diam' [-Wunused-variable] static real dist=0.0,rbox=0.0,to_diam=0.0; ^ ../../../src/tools/gmx_editconf.c:456:24: warning: unused variable 'rbox' [-Wunused-variable] static real dist=0.0,rbox=0.0,to_diam=0.0; ^ In file included from ../../../src/tools/gmx_editconf.c:43:0: ../../../src/tools/gmx_editconf.c: At top level: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/tools/gmx_editconf.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_editconf.c:49: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_editconf.c:53: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_editconf.c:53:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_editconf.c:79:14: warning: 'pdbtp' defined but not used [-Wunused-variable] static char *pdbtp[epdbNR]={"ATOM ","HETATM"}; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'xpm_mat': ../../../src/tools/gmx_xpm2ps.c:559:14: warning: unused variable 'k' [-Wunused-variable] int i,j,k,x,y,col; ^ ../../../src/tools/gmx_xpm2ps.c:559:12: warning: unused variable 'j' [-Wunused-variable] int i,j,k,x,y,col; ^ ../../../src/tools/gmx_xpm2ps.c:558:10: warning: unused variable 'buf' [-Wunused-variable] char buf[100]; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'tick_spacing': ../../../src/tools/gmx_xpm2ps.c:599:18: warning: unused variable 'bFive' [-Wunused-variable] bool bTryAgain,bFive; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'ps_mat': ../../../src/tools/gmx_xpm2ps.c:644:12: warning: unused variable 'j' [-Wunused-variable] int i,j,x,y,col,leg=0; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'write_combined_matrix': ../../../src/tools/gmx_xpm2ps.c:919:14: warning: unused variable 'map' [-Wunused-variable] t_mapping *map=NULL; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'gmx_xpm2ps': ../../../src/tools/gmx_xpm2ps.c:1127:56: warning: unused variable 'bAdd' [-Wunused-variable] static bool bFrame=TRUE,bZeroLine=FALSE,bYonce=FALSE,bAdd=FALSE; ^ In file included from ../../../src/tools/gmx_xpm2ps.c:42:0: ../../../src/tools/gmx_xpm2ps.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_xpm2ps.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genbox.c -fPIC -DPIC -o .libs/gmx_genbox.o ../../../src/tools/gmx_genbox.c: In function 'gmx_genbox': ../../../src/tools/gmx_genbox.c:665:11: warning: unused variable 'pbc' [-Wunused-variable] t_pbc pbc; ^ In file included from ../../../src/tools/gmx_genbox.c:47:0: ../../../src/tools/gmx_genbox.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_genbox.c:55: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genbox.c:55:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genbox.c:57: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genbox.c:61:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genion.c -fPIC -DPIC -o .libs/gmx_genion.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genconf.lo ../../../src/tools/gmx_genconf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genpr.lo ../../../src/tools/gmx_genpr.c ../../../src/tools/gmx_genion.c: In function 'insert_ion': ../../../src/tools/gmx_genion.c:72:8: warning: unused variable 'xei' [-Wunused-variable] rvec xei,dx; ^ ../../../src/tools/gmx_genion.c:70:29: warning: unused variable 'm' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ ../../../src/tools/gmx_genion.c:70:23: warning: unused variable 'wlast' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ ../../../src/tools/gmx_genion.c:70:16: warning: unused variable 'owater' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ In file included from ../../../src/tools/gmx_genion.c:41:0: ../../../src/tools/gmx_genion.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genion.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genion.c:48:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/tools/gmx_genion.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genion.c:54:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_eneconv.lo ../../../src/tools/gmx_eneconv.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_vanhove.lo ../../../src/tools/gmx_vanhove.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genconf.c -fPIC -DPIC -o .libs/gmx_genconf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_eneconv.c -fPIC -DPIC -o .libs/gmx_eneconv.o In file included from ../../../src/tools/gmx_genconf.c:40:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genconf.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genconf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genconf.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_genconf.c:93:13: warning: 'move_x' defined but not used [-Wunused-function] static void move_x(int natoms,rvec x[],matrix box) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genpr.c -fPIC -DPIC -o .libs/gmx_genpr.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_vanhove.c -fPIC -DPIC -o .libs/gmx_vanhove.o ../../../src/tools/gmx_eneconv.c: In function 'gmx_eneconv': ../../../src/tools/gmx_eneconv.c:427:14: warning: unused variable 'ok' [-Wunused-variable] bool ok; ^ ../../../src/tools/gmx_eneconv.c:426:35: warning: unused variable 'chptr' [-Wunused-variable] char inputstring[STRLEN],*chptr; ^ ../../../src/tools/gmx_eneconv.c:426:14: warning: unused variable 'inputstring' [-Wunused-variable] char inputstring[STRLEN],*chptr; ^ ../../../src/tools/gmx_eneconv.c:425:42: warning: unused variable 't1' [-Wunused-variable] real *readtime,*settime,timestep,t1,tadjust; ^ ../../../src/tools/gmx_eneconv.c:421:42: warning: unused variable 'j' [-Wunused-variable] int nre,nremax,this_nre,nfile,i,j,kkk,nset,*set=NULL; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_eneconv.c:45: ../../../src/tools/gmx_eneconv.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_eneconv.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_eneconv.c:101:13: warning: 'same_time' defined but not used [-Wunused-function] static bool same_time(real t1,real t2) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_vanhove.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_vanhove.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_vanhove.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_vanhove.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genpr.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genpr.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_genpr.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genpr.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wheel.lo ../../../src/tools/gmx_wheel.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o addconf.lo ../../../src/tools/addconf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcpot.lo ../../../src/tools/calcpot.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_wheel.c -fPIC -DPIC -o .libs/gmx_wheel.o /bin/sh ../../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o edittop.lo ../../../src/tools/edittop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/addconf.c -fPIC -DPIC -o .libs/addconf.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/calcpot.c -fPIC -DPIC -o .libs/calcpot.o ../../../src/tools/addconf.c: In function 'do_nsgrid': ../../../src/tools/addconf.c:205:14: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ ../../../src/tools/addconf.c: In function 'add_conf': ../../../src/tools/addconf.c:328:23: warning: unused variable 'xpp' [-Wunused-variable] rvec dx,xi,xj,xpp,*x_all,*v_all; ^ ../../../src/tools/addconf.c:326:34: warning: unused variable 'dz1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:30: warning: unused variable 'dz0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:26: warning: unused variable 'dy1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:22: warning: unused variable 'dy0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:18: warning: unused variable 'dx1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:14: warning: unused variable 'dx0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:325:44: warning: unused variable 'maxincell' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:37: warning: unused variable 'ncells' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:35: warning: unused variable 'k' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:33: warning: unused variable 'd' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:19: warning: unused variable 'resnr' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:324:47: warning: unused variable 'iprot' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:324:21: warning: unused variable 'm' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:324:18: warning: unused variable 'jj' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:322:47: warning: unused variable 'ib2' [-Wunused-variable] real max_vdw,*r_prot,*r_all,n2,r2,ib1,ib2; ^ ../../../src/tools/addconf.c:322:43: warning: unused variable 'ib1' [-Wunused-variable] real max_vdw,*r_prot,*r_all,n2,r2,ib1,ib2; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/addconf.c:42: ../../../src/tools/addconf.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/addconf.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/addconf.c:46:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/addconf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/addconf.c:70:13: warning: 'set_margin' defined but not used [-Wunused-function] static void set_margin(t_atoms *atoms, rvec *x, real *r) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_dssp.o ../../../src/tools/do_dssp.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_wheel.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_wheel.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_wheel.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_wheel.c:55: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o editconf.o ../../../src/tools/editconf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eneconv.o ../../../src/tools/eneconv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genbox.o ../../../src/tools/genbox.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/edittop.c -fPIC -DPIC -o .libs/edittop.o x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genconf.o ../../../src/tools/genconf.c ../../../src/tools/calcpot.c: In function 'c_tabpot': ../../../src/tools/calcpot.c:79:8: warning: unused variable 'qqO' [-Wunused-variable] real qqO,qj; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genrestr.o ../../../src/tools/genrestr.c ../../../src/tools/calcpot.c:78:43: warning: unused variable 'rinv2O' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:24: warning: unused variable 'fsO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:20: warning: unused variable 'vcO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:16: warning: unused variable 'tzO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:12: warning: unused variable 'tyO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:8: warning: unused variable 'txO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:76:28: warning: unused variable 'fzO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:24: warning: unused variable 'fyO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:20: warning: unused variable 'fxO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:16: warning: unused variable 'fzJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:12: warning: unused variable 'fyJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:8: warning: unused variable 'fxJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:75:38: warning: unused variable 'ggid' [-Wunused-variable] int ii,k,n,jnr,ii3,nj0,nj1,is3,j3,ggid; ^ ../../../src/tools/calcpot.c:71:50: warning: unused variable 'FF' [-Wunused-variable] real r1,r1t,fijC,eps,eps2,Y,F,Fp,Geps,Heps2,VV,FF; ^ ../../../src/tools/calcpot.c:71:15: warning: unused variable 'fijC' [-Wunused-variable] real r1,r1t,fijC,eps,eps2,Y,F,Fp,Geps,Heps2,VV,FF; ^ ../../../src/tools/calcpot.c:70:14: warning: unused variable 'two' [-Wunused-variable] const real two = 2.000000; ^ ../../../src/tools/calcpot.c: In function 'calc_pot': ../../../src/tools/calcpot.c:176:15: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ ../../../src/tools/calcpot.c: In function 'init_calcpot': ../../../src/tools/calcpot.c:238:12: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/calcpot.c:40: ../../../src/tools/calcpot.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/calcpot.c:40:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/calcpot.c:46:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmtraj.o ../../../src/tools/g_nmtraj.c ../../../src/tools/do_dssp.c: In function 'main': ../../../src/tools/do_dssp.c:347:16: warning: unused variable 'j' [-Wunused-variable] int i,j,natoms,nframe=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/do_dssp.c:47: ../../../src/tools/do_dssp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/do_dssp.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/do_dssp.c:49:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o make_ndx.o ../../../src/tools/make_ndx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mk_angndx.o ../../../src/tools/mk_angndx.c ../../../src/tools/edittop.c: In function 'delete_from_block': ../../../src/tools/edittop.c:104:17: warning: unused variable 'k' [-Wunused-variable] int i,i1,j1,j,k; ^ ../../../src/tools/edittop.c:104:12: warning: unused variable 'j1' [-Wunused-variable] int i,i1,j1,j,k; ^ ../../../src/tools/edittop.c: In function 'delete_atom': ../../../src/tools/edittop.c:161:7: warning: unused variable 'k' [-Wunused-variable] int k; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/make_ndx.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/make_ndx.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/make_ndx.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/make_ndx.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjcat.o ../../../src/tools/trjcat.c In file included from ../../../src/tools/mk_angndx.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/mk_angndx.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjconv.o ../../../src/tools/trjconv.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjorder.o ../../../src/tools/trjorder.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wheel.o ../../../src/tools/wheel.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xpm2ps.o ../../../src/tools/xpm2ps.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genion.o ../../../src/tools/genion.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o anadock.o ../../../src/tools/anadock.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o make_edi.o ../../../src/tools/make_edi.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_analyze.o ../../../src/tools/g_analyze.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_anaeig.o ../../../src/tools/g_anaeig.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_angle.o ../../../src/tools/g_angle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_bond.o ../../../src/tools/g_bond.c ../../../src/tools/make_edi.c: In function 'main': ../../../src/tools/make_edi.c:640:10: warning: variable 'bTop' set but not used [-Wunused-but-set-variable] bool bTop, bFit1; ^ In file included from ../../../src/tools/make_edi.c:43:0: ../../../src/tools/make_edi.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/make_edi.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/make_edi.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/make_edi.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/make_edi.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_bundle.o ../../../src/tools/g_bundle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_chi.o ../../../src/tools/g_chi.c ../../../src/tools/anadock.c: In function 'rmsd_dist': ../../../src/tools/anadock.c:197:13: warning: variable 'dist' set but not used [-Wunused-but-set-variable] real rmsd,dist; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_cluster.o ../../../src/tools/g_cluster.c In file included from ../../../src/tools/anadock.c:41:0: ../../../src/tools/anadock.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/anadock.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/anadock.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/anadock.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_confrms.o ../../../src/tools/g_confrms.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_covar.o ../../../src/tools/g_covar.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_current.o ../../../src/tools/g_current.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_density.o ../../../src/tools/g_density.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_densmap.o ../../../src/tools/g_densmap.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dih.o ../../../src/tools/g_dih.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dielectric.o ../../../src/tools/g_dielectric.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_helixorient.o ../../../src/tools/g_helixorient.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_principal.o ../../../src/tools/g_principal.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dipoles.o ../../../src/tools/g_dipoles.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_disre.o ../../../src/tools/g_disre.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dist.o ../../../src/tools/g_dist.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dyndom.o ../../../src/tools/g_dyndom.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_enemat.o ../../../src/tools/g_enemat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_energy.o ../../../src/tools/g_energy.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_lie.o ../../../src/tools/g_lie.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_filter.o ../../../src/tools/g_filter.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_gyrate.o ../../../src/tools/g_gyrate.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_h2order.o ../../../src/tools/g_h2order.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_hbond.o ../../../src/tools/g_hbond.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_helix.o ../../../src/tools/g_helix.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_mindist.o ../../../src/tools/g_mindist.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_msd.o ../../../src/tools/g_msd.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_morph.o ../../../src/tools/g_morph.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmeig.o ../../../src/tools/g_nmeig.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmens.o ../../../src/tools/g_nmens.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_order.o ../../../src/tools/g_order.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_polystat.o ../../../src/tools/g_polystat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_potential.o ../../../src/tools/g_potential.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rama.o ../../../src/tools/g_rama.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rdf.o ../../../src/tools/g_rdf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rms.o ../../../src/tools/g_rms.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rmsdist.o ../../../src/tools/g_rmsdist.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rmsf.o ../../../src/tools/g_rmsf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rotacf.o ../../../src/tools/g_rotacf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_saltbr.o ../../../src/tools/g_saltbr.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sas.o ../../../src/tools/g_sas.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sgangle.o ../../../src/tools/g_sgangle.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sham.o ../../../src/tools/g_sham.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sorient.o ../../../src/tools/g_sorient.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_spol.o ../../../src/tools/g_spol.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sdf.o ../../../src/tools/g_sdf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_spatial.o ../../../src/tools/g_spatial.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_tcaf.o ../../../src/tools/g_tcaf.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_traj.o ../../../src/tools/g_traj.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_vanhove.o ../../../src/tools/g_vanhove.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_velacc.o ../../../src/tools/g_velacc.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_clustsize.o ../../../src/tools/g_clustsize.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_mdmat.o ../../../src/tools/g_mdmat.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_wham.o ../../../src/tools/g_wham.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_kinetics.o ../../../src/tools/g_kinetics.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sigeps.o ../../../src/tools/sigeps.c /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o libgmxana_d.la -rpath /usr/lib64 autocorr.lo expfit.lo polynomials.lo levenmar.lo anadih.lo pp2shift.lo dlist.lo eigio.lo lsq.lo cmat.lo eigensolver.lo nsc.lo hxprops.lo fitahx.lo gmx_analyze.lo gmx_anaeig.lo gmx_angle.lo gmx_bond.lo gmx_bundle.lo gmx_chi.lo gmx_cluster.lo gmx_confrms.lo gmx_covar.lo gmx_current.lo gmx_density.lo gmx_densmap.lo gmx_dih.lo gmx_dielectric.lo gmx_kinetics.lo gmx_spatial.lo gmx_dipoles.lo gmx_disre.lo gmx_dist.lo gmx_dyndom.lo gmx_enemat.lo gmx_energy.lo gmx_lie.lo gmx_filter.lo gmx_gyrate.lo gmx_h2order.lo gmx_hbond.lo gmx_helix.lo gmx_mindist.lo gmx_msd.lo gmx_morph.lo gmx_nmeig.lo gmx_nmens.lo gmx_order.lo gmx_principal.lo gmx_polystat.lo gmx_potential.lo gmx_rama.lo gmx_rdf.lo gmx_rms.lo gmx_rmsdist.lo gmx_rmsf.lo gmx_rotacf.lo gmx_saltbr.lo gmx_sas.lo gmx_sdf.lo gmx_sgangle.lo gmx_sorient.lo gmx_spol.lo gmx_tcaf.lo gmx_traj.lo gmx_velacc.lo gmx_helixorient.lo gmx_clustsize.lo gmx_mdmat.lo gmx_wham.lo correl.lo gmx_sham.lo gmx_nmtraj.lo gmx_trjconv.lo gmx_trjcat.lo gmx_trjorder.lo gmx_xpm2ps.lo gmx_editconf.lo gmx_genbox.lo gmx_genion.lo gmx_genconf.lo gmx_genpr.lo gmx_eneconv.lo gmx_vanhove.lo gmx_wheel.lo addconf.lo calcpot.lo edittop.lo ../gmxlib/libgmx_d.la ../mdlib/libmd_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte ../../../src/tools/sigeps.c: In function 'main': ../../../src/tools/sigeps.c:106:42: warning: unused variable 'pp' [-Wunused-variable] real qq,x,oldx,minimum,mval,dp[2],pp[2]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/sigeps.c:43: ../../../src/tools/sigeps.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/sigeps.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/sigeps.c:47:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/sigeps.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/sigeps.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -shared .libs/autocorr.o .libs/expfit.o .libs/polynomials.o .libs/levenmar.o .libs/anadih.o .libs/pp2shift.o .libs/dlist.o .libs/eigio.o .libs/lsq.o .libs/cmat.o .libs/eigensolver.o .libs/nsc.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_analyze.o .libs/gmx_anaeig.o .libs/gmx_angle.o .libs/gmx_bond.o .libs/gmx_bundle.o .libs/gmx_chi.o .libs/gmx_cluster.o .libs/gmx_confrms.o .libs/gmx_covar.o .libs/gmx_current.o .libs/gmx_density.o .libs/gmx_densmap.o .libs/gmx_dih.o .libs/gmx_dielectric.o .libs/gmx_kinetics.o .libs/gmx_spatial.o .libs/gmx_dipoles.o .libs/gmx_disre.o .libs/gmx_dist.o .libs/gmx_dyndom.o .libs/gmx_enemat.o .libs/gmx_energy.o .libs/gmx_lie.o .libs/gmx_filter.o .libs/gmx_gyrate.o .libs/gmx_h2order.o .libs/gmx_hbond.o .libs/gmx_helix.o .libs/gmx_mindist.o .libs/gmx_msd.o .libs/gmx_morph.o .libs/gmx_nmeig.o .libs/gmx_nmens.o .libs/gmx_order.o .libs/gmx_principal.o .libs/gmx_polystat.o .libs/gmx_potential.o .libs/gmx_rama.o .libs/gmx_rdf.o .libs/gmx_rms.o .libs/gmx_rmsdist.o .libs/gmx_rmsf.o .libs/gmx_rotacf.o .libs/gmx_saltbr.o .libs/gmx_sas.o .libs/gmx_sdf.o .libs/gmx_sgangle.o .libs/gmx_sorient.o .libs/gmx_spol.o .libs/gmx_tcaf.o .libs/gmx_traj.o .libs/gmx_velacc.o .libs/gmx_helixorient.o .libs/gmx_clustsize.o .libs/gmx_mdmat.o .libs/gmx_wham.o .libs/correl.o .libs/gmx_sham.o .libs/gmx_nmtraj.o .libs/gmx_trjconv.o .libs/gmx_trjcat.o .libs/gmx_trjorder.o .libs/gmx_xpm2ps.o .libs/gmx_editconf.o .libs/gmx_genbox.o .libs/gmx_genion.o .libs/gmx_genconf.o .libs/gmx_genpr.o .libs/gmx_eneconv.o .libs/gmx_vanhove.o .libs/gmx_wheel.o .libs/addconf.o .libs/calcpot.o .libs/edittop.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/lib64/openmpi/lib ../gmxlib/.libs/libgmx_d.so ../mdlib/.libs/libmd_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-Rpath:/usr/lib64/openmpi/lib -Wl,-soname -Wl,libgmxana_d.so.5 -o .libs/libgmxana_d.so.5.0.0 (cd .libs && rm -f libgmxana_d.so.5 && ln -s libgmxana_d.so.5.0.0 libgmxana_d.so.5) (cd .libs && rm -f libgmxana_d.so && ln -s libgmxana_d.so.5.0.0 libgmxana_d.so) creating libgmxana_d.la (cd .libs && rm -f libgmxana_d.la && ln -s ../libgmxana_d.la libgmxana_d.la) /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o do_dssp do_dssp.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o editconf editconf.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_editconf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o eneconv eneconv.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_eneconv.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genbox genbox.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/addconf.o .libs/gmx_genbox.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genconf genconf.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_genconf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genrestr genrestr.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_genpr.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o make_ndx make_ndx.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmtraj g_nmtraj.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/eigio.o .libs/gmx_nmtraj.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genconf genconf.o .libs/gmx_genconf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/make_ndx make_ndx.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/editconf editconf.o .libs/gmx_editconf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/eneconv eneconv.o .libs/gmx_eneconv.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmtraj g_nmtraj.o .libs/eigio.o .libs/gmx_nmtraj.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genrestr genrestr.o .libs/gmx_genpr.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/do_dssp do_dssp.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genbox genbox.o .libs/addconf.o .libs/gmx_genbox.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_nmtraj creating eneconv creating genconf creating make_ndx /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o mk_angndx mk_angndx.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjcat trjcat.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_trjcat.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjconv trjconv.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_trjconv.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjorder trjorder.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_trjorder.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating editconf creating genbox creating genrestr /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o wheel wheel.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_wheel.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating do_dssp /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o xpm2ps xpm2ps.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_xpm2ps.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genion genion.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/calcpot.o .libs/gmx_genion.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o anadock anadock.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/lsq.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjconv trjconv.o .libs/gmx_trjconv.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating trjconv DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjorder trjorder.o .libs/gmx_trjorder.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o make_edi make_edi.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/eigio.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/xpm2ps xpm2ps.o .libs/gmx_xpm2ps.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjcat trjcat.o .libs/gmx_trjcat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/mk_angndx mk_angndx.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating trjorder DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/wheel wheel.o .libs/gmx_wheel.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_analyze g_analyze.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o .libs/gmx_analyze.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genion genion.o .libs/calcpot.o .libs/gmx_genion.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating mk_angndx creating xpm2ps /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_anaeig g_anaeig.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/eigio.o .libs/gmx_anaeig.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating trjcat DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/anadock anadock.o .libs/lsq.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_angle g_angle.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_angle.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_bond g_bond.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/lsq.o .libs/gmx_bond.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating wheel creating anadock /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_bundle g_bundle.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_bundle.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_chi g_chi.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/pp2shift.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_chi.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating genion /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_cluster g_cluster.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/eigensolver.o .libs/cmat.o .libs/gmx_cluster.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/make_edi make_edi.o .libs/eigio.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_analyze g_analyze.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o .libs/gmx_analyze.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating make_edi /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_confrms g_confrms.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_confrms.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_analyze DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_angle g_angle.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_angle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_bond g_bond.o .libs/lsq.o .libs/gmx_bond.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_covar g_covar.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_covar.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_anaeig g_anaeig.o .libs/eigio.o .libs/gmx_anaeig.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_angle creating g_bond /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_current g_current.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_current.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_density g_density.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_density.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_chi g_chi.o .libs/pp2shift.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_chi.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_anaeig /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_densmap g_densmap.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_densmap.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_cluster g_cluster.o .libs/eigensolver.o .libs/cmat.o .libs/gmx_cluster.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_bundle g_bundle.o .libs/gmx_bundle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_chi creating g_cluster /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dih g_dih.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_dih.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dielectric g_dielectric.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dielectric.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_bundle /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_helixorient g_helixorient.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_helixorient.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_confrms g_confrms.o .libs/gmx_confrms.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_covar g_covar.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_covar.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_confrms /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_principal g_principal.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_principal.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_covar /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dipoles g_dipoles.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/lsq.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dipoles.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_density g_density.o .libs/gmx_density.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_current g_current.o .libs/gmx_current.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dielectric g_dielectric.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dielectric.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_densmap g_densmap.o .libs/gmx_densmap.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dih g_dih.o .libs/gmx_dih.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_densmap creating g_density /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_disre g_disre.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_disre.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_dih /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dist g_dist.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_dist.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_current /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dyndom g_dyndom.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_dyndom.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_dielectric /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_enemat g_enemat.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_enemat.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_energy g_energy.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_energy.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_helixorient g_helixorient.o .libs/gmx_helixorient.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_helixorient /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_lie g_lie.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_lie.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dipoles g_dipoles.o .libs/lsq.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dipoles.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_principal g_principal.o .libs/gmx_principal.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_dipoles creating g_principal /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_filter g_filter.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_filter.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_gyrate g_gyrate.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_gyrate.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dyndom g_dyndom.o .libs/gmx_dyndom.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_disre g_disre.o .libs/gmx_disre.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_energy g_energy.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_energy.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dist g_dist.o .libs/gmx_dist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_dyndom /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_h2order g_h2order.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_h2order.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_enemat g_enemat.o .libs/gmx_enemat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_energy creating g_disre /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_hbond g_hbond.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_enemat /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_helix g_helix.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/hxprops.o .libs/fitahx.o .libs/gmx_helix.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_dist DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_lie g_lie.o .libs/gmx_lie.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_mindist g_mindist.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_mindist.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_msd g_msd.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/lsq.o .libs/gmx_msd.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_lie /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_morph g_morph.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_morph.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_filter g_filter.o .libs/gmx_filter.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_gyrate g_gyrate.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_gyrate.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_filter /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmeig g_nmeig.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmeig.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_gyrate /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmens g_nmens.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmens.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_h2order g_h2order.o .libs/gmx_h2order.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_mindist g_mindist.o .libs/gmx_mindist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_h2order DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_helix g_helix.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_helix.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_order g_order.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_order.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_hbond g_hbond.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_msd g_msd.o .libs/lsq.o .libs/gmx_msd.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_helix creating g_mindist DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_morph g_morph.o .libs/gmx_morph.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_polystat g_polystat.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_polystat.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_potential g_potential.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_potential.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_hbond creating g_msd /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rama g_rama.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_rama.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_morph /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rdf g_rdf.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rdf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rms g_rms.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/cmat.o .libs/gmx_rms.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmeig g_nmeig.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmeig.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_nmeig /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rmsdist g_rmsdist.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_rmsdist.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmens g_nmens.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmens.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_nmens DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_order g_order.o .libs/gmx_order.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rmsf g_rmsf.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/eigensolver.o .libs/gmx_rmsf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_order /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rotacf g_rotacf.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rotacf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_polystat g_polystat.o .libs/gmx_polystat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_potential g_potential.o .libs/gmx_potential.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_polystat /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_saltbr g_saltbr.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_saltbr.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rms g_rms.o .libs/cmat.o .libs/gmx_rms.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_potential DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rdf g_rdf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rdf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sas g_sas.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/nsc.o .libs/gmx_sas.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rama g_rama.o .libs/gmx_rama.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rms /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sgangle g_sgangle.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_sgangle.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_rama /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sham g_sham.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_sham.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_rdf /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sorient g_sorient.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_sorient.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rmsdist g_rmsdist.o .libs/gmx_rmsdist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rmsdist /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_spol g_spol.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_spol.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rmsf g_rmsf.o .libs/eigensolver.o .libs/gmx_rmsf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rotacf g_rotacf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rotacf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rotacf creating g_rmsf /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sdf g_sdf.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_sdf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_spatial g_spatial.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_spatial.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_saltbr g_saltbr.o .libs/gmx_saltbr.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_saltbr /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_tcaf g_tcaf.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_tcaf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sas g_sas.o .libs/nsc.o .libs/gmx_sas.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sgangle g_sgangle.o .libs/gmx_sgangle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_sas DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sham g_sham.o .libs/gmx_sham.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_sgangle /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_traj g_traj.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_traj.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sorient g_sorient.o .libs/gmx_sorient.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_vanhove g_vanhove.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_vanhove.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_sham /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_velacc g_velacc.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_velacc.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_sorient /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_clustsize g_clustsize.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_clustsize.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_spol g_spol.o .libs/gmx_spol.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_spol /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_mdmat g_mdmat.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_mdmat.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sdf g_sdf.o .libs/gmx_sdf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_spatial g_spatial.o .libs/gmx_spatial.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_sdf /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_wham g_wham.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_wham.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte creating g_spatial /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_kinetics g_kinetics.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la .libs/gmx_kinetics.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_tcaf g_tcaf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_tcaf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_traj g_traj.o .libs/gmx_traj.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_tcaf /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o sigeps sigeps.o libgmxana_d.la ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_clustsize g_clustsize.o .libs/gmx_clustsize.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_traj creating g_clustsize DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_vanhove g_vanhove.o .libs/gmx_vanhove.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_velacc g_velacc.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_velacc.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_vanhove creating g_velacc DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_mdmat g_mdmat.o .libs/gmx_mdmat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_mdmat DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_kinetics g_kinetics.o .libs/gmx_kinetics.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_wham g_wham.o .libs/gmx_wham.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_wham creating g_kinetics DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/sigeps sigeps.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_d.so ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating sigeps make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/tools' Making all in ngmx make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/ngmx' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ngmx.o ../../../src/ngmx/ngmx.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xutil.o ../../../src/ngmx/xutil.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xmb.o ../../../src/ngmx/xmb.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o x11.o ../../../src/ngmx/x11.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlghi.o ../../../src/ngmx/xdlghi.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fgrid.o ../../../src/ngmx/fgrid.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlgitem.o ../../../src/ngmx/xdlgitem.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o popup.o ../../../src/ngmx/popup.c ../../../src/ngmx/ngmx.c: In function 'dump_xw': ../../../src/ngmx/ngmx.c:68:8: warning: variable 'rc' set but not used [-Wunused-but-set-variable] int rc; ^ ../../../src/ngmx/ngmx.c: In function 'init_gmx': ../../../src/ngmx/ngmx.c:354:35: warning: unused variable 'nre' [-Wunused-variable] int step,natom,nre,natom_trx; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/ngmx.c:49: ../../../src/ngmx/ngmx.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/ngmx/ngmx.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/ngmx/ngmx.c:65:13: warning: 'dump_xw' defined but not used [-Wunused-function] static void dump_xw(char *dispname,Window w,char *fn) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pulldown.o ../../../src/ngmx/pulldown.c ../../../src/ngmx/x11.c:132:13: warning: 'TestEvent' defined but not used [-Wunused-function] static Bool TestEvent(Display *disp,XEvent *event,char *arg) ^ ../../../src/ngmx/x11.c:265:13: warning: 'Xrm' defined but not used [-Wunused-function] static void Xrm(int *argc, char *argv[]) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlg.o ../../../src/ngmx/xdlg.c ../../../src/ngmx/fgrid.c: In function 'GetBuf': ../../../src/ngmx/fgrid.c:101:7: warning: variable 'rc' set but not used [-Wunused-but-set-variable] int rc; ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o manager.o ../../../src/ngmx/manager.c ../../../src/ngmx/fgrid.c: In function 'FGridFromFile': ../../../src/ngmx/fgrid.c:346:8: warning: unused variable 'newinfile' [-Wunused-variable] char newinfile[STRLEN]; ^ ../../../src/ngmx/fgrid.c:345:9: warning: unused variable 'gmxlib' [-Wunused-variable] char *gmxlib; ^ ../../../src/ngmx/manager.c: In function 'set_file': ../../../src/ngmx/manager.c:182:18: warning: unused variable 'idum' [-Wunused-variable] int i,idum; ^ ../../../src/ngmx/manager.c: In function 'step_man': ../../../src/ngmx/manager.c:312:15: warning: unused variable 'dum' [-Wunused-variable] int dum; ^ ../../../src/ngmx/manager.c:311:15: warning: unused variable 'rdum' [-Wunused-variable] real rdum; ^ In file included from ../../../src/ngmx/manager.c:48:0: ../../../src/ngmx/manager.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/ngmx/manager.c:55:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/ngmx/manager.c:56: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/ngmx/manager.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o buttons.o ../../../src/ngmx/buttons.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nmol.o ../../../src/ngmx/nmol.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nleg.o ../../../src/ngmx/nleg.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dialogs.o ../../../src/ngmx/dialogs.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o logo.o ../../../src/ngmx/logo.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o filter.o ../../../src/ngmx/filter.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o molps.o ../../../src/ngmx/molps.c ../../../src/ngmx/dialogs.c:240:13: warning: 'Extract' defined but not used [-Wunused-function] static void Extract(t_dlg *dlg,int ID,char *buf) ^ ../../../src/ngmx/dialogs.c:373:13: warning: 'in_set' defined but not used [-Wunused-function] static bool in_set(int i,int n,int set[]) ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xrama.o ../../../src/ngmx/xrama.c ../../../src/ngmx/nmol.c: In function 'draw_box': ../../../src/ngmx/nmol.c:422:23: warning: unused variable 'tv2' [-Wunused-variable] iv2 vec2[NCUCEDGE],tv2; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/ngmx/nmol.c:51: ../../../src/ngmx/nmol.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/ngmx/nmol.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/ngmx/logo.c:45:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o highway.o ../../../src/ngmx/highway.c ../../../src/ngmx/xrama.c: In function 'main': ../../../src/ngmx/xrama.c:319:15: warning: variable 'ramatop' set but not used [-Wunused-but-set-variable] t_topology *ramatop; ^ In file included from ../../../src/ngmx/xrama.c:44:0: ../../../src/ngmx/xrama.c: At top level: In file included from ../../../src/ngmx/highway.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/highway.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/xrama.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/ngmx/molps.c: In function 'ps_draw_mol': ../../../src/ngmx/molps.c:204:15: warning: unused variable 'ntime' [-Wunused-variable] static int ntime=0; ^ ../../../src/ngmx/molps.c:203:15: warning: unused variable 'tstr' [-Wunused-variable] static char tstr[2][20]; ^ /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o xrama xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o highway highway.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_d.la ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath mkdir .libs DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/xrama xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/highway highway.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd_d.so ../gmxlib/.libs/libgmx_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath creating highway creating xrama creating ngmx make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/ngmx' Making all in contrib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/contrib' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/contrib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' Making all in admin make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/admin' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/admin' Making all in scripts make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/scripts' cat ../../scripts/GMXRC.in | sed 's,@bindir\@,/usr/bin,' > GMXRC cat ../../scripts/GMXRC.csh.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.csh cat ../../scripts/GMXRC.bash.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.bash cat ../../scripts/GMXRC.zsh.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.zsh make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/scripts' Making all in share make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' Making all in top make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/top' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/top' Making all in tutor make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' Making all in nmr1 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr1' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr1' Making all in nmr2 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr2' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr2' Making all in speptide make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/speptide' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/speptide' Making all in water make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/water' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/water' Making all in gmxdemo make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/gmxdemo' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/gmxdemo' Making all in methanol make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/methanol' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/methanol' Making all in mixed make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/mixed' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/mixed' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' Making all in template make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/template' cat ../../../share/template/Template.mak | \ sed 's,@LDFLAGS\@,-L/usr/lib64 -lgslcblas ,' | \ sed 's,@LIBS\@,-lmd_d -lgmx_d -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ,' | \ sed 's,@CFLAGS\@,-g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -I/usr/include -I/usr/include/gromacs -DGMX_DOUBLE,' | \ sed 's,@CC\@,x86_64-alt-linux-gcc,' | \ sed 's,@host\@,x86_64-alt-linux-gnu,' >Makefile.x86_64-alt-linux-gnu_double sed: -e expression #1, char 36: unknown option to `s' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/template' Making all in html make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' Making all in . make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' Making all in images make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/images' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/images' Making all in online make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/online' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/online' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' Making all in man make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' Making all in man1 make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man/man1' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man/man1' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' make[1]: Nothing to be done for `all-am'. make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' make: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' + popd ~/RPM/BUILD/gromacs-4.0.7 + mkdir mpi-single + pushd mpi-single ~/RPM/BUILD/gromacs-4.0.7/mpi-single ~/RPM/BUILD/gromacs-4.0.7 + buildThis float enable _mpi + ln -s ../configure . + CFLAGS='-pipe -Wall -g -O2' + export CFLAGS + CXXFLAGS='-pipe -Wall -g -O2' + export CXXFLAGS + FFLAGS='-pipe -Wall -g -O2' + export FFLAGS + '[' -n '' ']' ++ printf %s '-pipe -Wall -g -O2' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS= + export ASFLAGS + export lt_cv_prog_cc_static_works=no + lt_cv_prog_cc_static_works=no + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + sort -u + ./configure --build=x86_64-alt-linux --host=x86_64-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --without-included-gettext --disable-rpath --enable-static=no --enable-shared --enable-float --enable-mpi --enable-prefetch-forces --enable-fortran --with-gnu-ld --with-fft=fftw3 --with-x --with-gsl --enable-mpi --program-suffix=_mpi --with-external-blas=-lopenblas configure: WARNING: unrecognized options: --without-included-gettext, --disable-rpath, --enable-prefetch-forces checking build system type... x86_64-alt-linux-gnu checking host system type... x86_64-alt-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '646' is supported by ustar format... yes checking whether GID '646' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking for x86_64-alt-linux-cc... no checking for x86_64-alt-linux-icc... no checking for x86_64-alt-linux-xlc... no checking for x86_64-alt-linux-gcc... x86_64-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-alt-linux-gcc accepts -g... yes checking for x86_64-alt-linux-gcc option to accept ISO C89... none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of x86_64-alt-linux-gcc... none checking for x86_64-alt-linux-f77... no checking for x86_64-alt-linux-ifort... no checking for x86_64-alt-linux-xlf... no checking for x86_64-alt-linux-xlf77... no checking for x86_64-alt-linux-cf77... no checking for x86_64-alt-linux-fl32... no checking for x86_64-alt-linux-g77... no checking for x86_64-alt-linux-fort77... no checking for x86_64-alt-linux-f90... no checking for x86_64-alt-linux-xlf90... no checking for x86_64-alt-linux-pgf77... no checking for x86_64-alt-linux-cf77... no checking for x86_64-alt-linux-fort... no checking for x86_64-alt-linux-fort77... no checking for x86_64-alt-linux-pgf90... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking dependency style of x86_64-alt-linux-gcc... none checking for mpxlc... no checking for mpicc... mpicc checking whether the MPI cc command works... yes checking for catamount... no checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking how to run the C preprocessor... mpicc -E checking whether mpicc accepts -O3... yes checking whether mpicc accepts -funroll-all-loops... yes ****************************************** * Using CFLAGS from environment variable * ****************************************** ****************************************** * Using FFLAGS from environment variable * ****************************************** checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking size of int... 4 checking size of long int... 8 checking size of long long int... 8 checking size of off_t... 8 checking that size_t can hold pointers... yes checking floating-point format... IEEE754 (little-endian byte and word order) checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for a sed that does not truncate output... /bin/sed checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for /usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking how to recognise dependent libraries... (cached) pass_all checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking for x86_64-alt-linux-g++... x86_64-alt-linux-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-alt-linux-g++ accepts -g... yes checking dependency style of x86_64-alt-linux-g++... none checking how to run the C++ preprocessor... x86_64-alt-linux-g++ -E checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for objdir... .libs checking for x86_64-alt-linux-ar... no checking for ar... ar checking for x86_64-alt-linux-ranlib... no checking for ranlib... ranlib checking for x86_64-alt-linux-strip... no checking for strip... strip checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC checking if mpicc PIC flag -fPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by x86_64-alt-linux-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-alt-linux-g++ option to produce PIC... -fPIC checking if x86_64-alt-linux-g++ PIC flag -fPIC works... yes checking if x86_64-alt-linux-g++ static flag -static works... no checking if x86_64-alt-linux-g++ supports -c -o file.o... yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... no checking if f77 supports -c -o file.o... yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for sqrt in -lm... yes checking for fftw3.h... yes checking for main in -lfftw3f... yes checking rpc/rpc.h usability... yes checking rpc/rpc.h presence... yes checking for rpc/rpc.h... yes checking for rpc/xdr.h... yes checking for xdr_float in -lnsl... yes checking for working memcmp... yes checking return type of signal handlers... void checking for off_t... yes checking for vprintf... yes checking for _doprnt... no checking if malloc debugging is wanted... no checking for strcasecmp... yes checking for strdup... yes checking for bool... no checking size of int... (cached) 4 checking size of long int... (cached) 8 checking size of long long int... (cached) 8 checking size of off_t... (cached) 8 checking size of void*... 8 checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking gsl/gsl_version.h usability... yes checking gsl/gsl_version.h presence... yes checking for gsl/gsl_version.h... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking libxml/parser.h usability... no checking libxml/parser.h presence... no checking for libxml/parser.h... no checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for inline... inline checking whether your compiler can handle assembly files (*.s)... yes checking whether as fully supports X86_64 SSE instructions... yes checking whether byte ordering is bigendian... (cached) no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/gmxlib/Makefile config.status: creating src/gmxlib/gmx_blas/Makefile config.status: creating src/gmxlib/gmx_lapack/Makefile config.status: creating src/gmxlib/nonbonded/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_3dnow/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse2/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ppc_altivec/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_single/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_double/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_bluegene/Makefile config.status: creating include/Makefile config.status: creating include/types/Makefile config.status: creating src/mdlib/Makefile config.status: creating src/kernel/Makefile config.status: creating src/tools/Makefile config.status: creating src/ngmx/Makefile config.status: creating src/contrib/Makefile config.status: creating scripts/Makefile config.status: creating admin/Makefile config.status: creating share/Makefile config.status: creating share/tutor/Makefile config.status: creating share/tutor/gmxdemo/Makefile config.status: creating share/tutor/nmr1/Makefile config.status: creating share/tutor/nmr2/Makefile config.status: creating share/tutor/water/Makefile config.status: creating share/tutor/mixed/Makefile config.status: creating share/tutor/methanol/Makefile config.status: creating share/tutor/speptide/Makefile config.status: creating share/template/Makefile config.status: creating share/top/Makefile config.status: creating share/html/Makefile config.status: creating share/html/images/Makefile config.status: creating share/html/online/Makefile config.status: creating man/Makefile config.status: creating man/man1/Makefile config.status: creating src/config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --without-included-gettext, --disable-rpath, --enable-prefetch-forces + sed -i 's|^hardcode_libdir_flag_spec=.*|hardcode_libdir_flag_spec=""|g' libtool + sed -i 's|^runpath_var=LD_RUN_PATH|runpath_var=DIE_RPATH_DIE|g' libtool + '[' -n 8 ']' + make -j8 make: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' Making all in include make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' Making all in . make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' Making all in types make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include/types' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include/types' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' Making all in src make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' make all-recursive make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' Making all in gmxlib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' Making all in nonbonded make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' Making all in nb_kernel_x86_64_sse make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel010_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel010_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel030_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel030_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel100_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel100_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel101_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel101_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel102_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel102_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel103_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel103_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel104_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel104_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel110_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel110_x86_64_sse.s mkdir .libs mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel010_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel010_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel101_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel101_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel103_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel103_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel111_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel111_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel112_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel112_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel104_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel104_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel030_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel030_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel110_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel110_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel102_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel102_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel100_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel100_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel113_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel113_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel114_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel114_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel130_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel130_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel131_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel131_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel132_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel132_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel133_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel133_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel112_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel112_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel111_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel111_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel130_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel130_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel113_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel113_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel134_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel134_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel133_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel133_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel114_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel114_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel200_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel200_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel131_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel131_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel132_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel132_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel201_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel201_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel202_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel202_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel203_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel203_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel204_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel204_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel210_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel210_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel211_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel211_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel134_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel134_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel200_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel200_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel204_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel204_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel210_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel210_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel203_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel203_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel201_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel201_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel212_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel212_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel202_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel202_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel213_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel213_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel214_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel214_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel230_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel230_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel231_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel231_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel232_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel232_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel211_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel211_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel233_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel233_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel234_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel234_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel214_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel214_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel230_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel230_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel213_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel213_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel212_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel212_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel300_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel300_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel232_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel232_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel231_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel231_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel301_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel301_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel302_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel302_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel303_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel303_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel233_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel233_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel304_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel304_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel234_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel234_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel310_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel310_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel311_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel311_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel312_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel312_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel301_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel301_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel300_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel300_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel313_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel313_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel314_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel314_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel311_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel311_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel310_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel310_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel303_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel303_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel304_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel304_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel302_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel302_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel330_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel330_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel312_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel312_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel331_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel331_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel332_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel332_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel333_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel333_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel313_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel313_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel334_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel334_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel400_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel410_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel410_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel330_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel330_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel314_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel314_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel430_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel430_x86_64_sse.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel332_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel332_x86_64_sse.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_x86_64_sse_test_asm.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel_x86_64_sse_test_asm.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel331_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel331_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel333_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel333_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel334_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel334_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel410_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel410_x86_64_sse.o /bin/sh ../../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_x86_64_sse.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel_x86_64_sse.c mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel400_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel430_x86_64_sse.s -fPIC -DPIC -o .libs/nb_kernel430_x86_64_sse.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel_x86_64_sse_test_asm.s -fPIC -DPIC -o .libs/nb_kernel_x86_64_sse_test_asm.o mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel_x86_64_sse.c -fPIC -DPIC -o .libs/nb_kernel_x86_64_sse.o /bin/sh ../../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnb_kernel_x86_64_sse.la nb_kernel010_x86_64_sse.lo nb_kernel030_x86_64_sse.lo nb_kernel100_x86_64_sse.lo nb_kernel101_x86_64_sse.lo nb_kernel102_x86_64_sse.lo nb_kernel103_x86_64_sse.lo nb_kernel104_x86_64_sse.lo nb_kernel110_x86_64_sse.lo nb_kernel111_x86_64_sse.lo nb_kernel112_x86_64_sse.lo nb_kernel113_x86_64_sse.lo nb_kernel114_x86_64_sse.lo nb_kernel130_x86_64_sse.lo nb_kernel131_x86_64_sse.lo nb_kernel132_x86_64_sse.lo nb_kernel133_x86_64_sse.lo nb_kernel134_x86_64_sse.lo nb_kernel200_x86_64_sse.lo nb_kernel201_x86_64_sse.lo nb_kernel202_x86_64_sse.lo nb_kernel203_x86_64_sse.lo nb_kernel204_x86_64_sse.lo nb_kernel210_x86_64_sse.lo nb_kernel211_x86_64_sse.lo nb_kernel212_x86_64_sse.lo nb_kernel213_x86_64_sse.lo nb_kernel214_x86_64_sse.lo nb_kernel230_x86_64_sse.lo nb_kernel231_x86_64_sse.lo nb_kernel232_x86_64_sse.lo nb_kernel233_x86_64_sse.lo nb_kernel234_x86_64_sse.lo nb_kernel300_x86_64_sse.lo nb_kernel301_x86_64_sse.lo nb_kernel302_x86_64_sse.lo nb_kernel303_x86_64_sse.lo nb_kernel304_x86_64_sse.lo nb_kernel310_x86_64_sse.lo nb_kernel311_x86_64_sse.lo nb_kernel312_x86_64_sse.lo nb_kernel313_x86_64_sse.lo nb_kernel314_x86_64_sse.lo nb_kernel330_x86_64_sse.lo nb_kernel331_x86_64_sse.lo nb_kernel332_x86_64_sse.lo nb_kernel333_x86_64_sse.lo nb_kernel334_x86_64_sse.lo nb_kernel400_x86_64_sse.lo nb_kernel410_x86_64_sse.lo nb_kernel430_x86_64_sse.lo nb_kernel_x86_64_sse_test_asm.lo nb_kernel_x86_64_sse.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libnb_kernel_x86_64_sse.a .libs/nb_kernel010_x86_64_sse.o .libs/nb_kernel030_x86_64_sse.o .libs/nb_kernel100_x86_64_sse.o .libs/nb_kernel101_x86_64_sse.o .libs/nb_kernel102_x86_64_sse.o .libs/nb_kernel103_x86_64_sse.o .libs/nb_kernel104_x86_64_sse.o .libs/nb_kernel110_x86_64_sse.o .libs/nb_kernel111_x86_64_sse.o .libs/nb_kernel112_x86_64_sse.o .libs/nb_kernel113_x86_64_sse.o .libs/nb_kernel114_x86_64_sse.o .libs/nb_kernel130_x86_64_sse.o .libs/nb_kernel131_x86_64_sse.o .libs/nb_kernel132_x86_64_sse.o .libs/nb_kernel133_x86_64_sse.o .libs/nb_kernel134_x86_64_sse.o .libs/nb_kernel200_x86_64_sse.o .libs/nb_kernel201_x86_64_sse.o .libs/nb_kernel202_x86_64_sse.o .libs/nb_kernel203_x86_64_sse.o .libs/nb_kernel204_x86_64_sse.o .libs/nb_kernel210_x86_64_sse.o .libs/nb_kernel211_x86_64_sse.o .libs/nb_kernel212_x86_64_sse.o .libs/nb_kernel213_x86_64_sse.o .libs/nb_kernel214_x86_64_sse.o .libs/nb_kernel230_x86_64_sse.o .libs/nb_kernel231_x86_64_sse.o .libs/nb_kernel232_x86_64_sse.o .libs/nb_kernel233_x86_64_sse.o .libs/nb_kernel234_x86_64_sse.o .libs/nb_kernel300_x86_64_sse.o .libs/nb_kernel301_x86_64_sse.o .libs/nb_kernel302_x86_64_sse.o .libs/nb_kernel303_x86_64_sse.o .libs/nb_kernel304_x86_64_sse.o .libs/nb_kernel310_x86_64_sse.o .libs/nb_kernel311_x86_64_sse.o .libs/nb_kernel312_x86_64_sse.o .libs/nb_kernel313_x86_64_sse.o .libs/nb_kernel314_x86_64_sse.o .libs/nb_kernel330_x86_64_sse.o .libs/nb_kernel331_x86_64_sse.o .libs/nb_kernel332_x86_64_sse.o .libs/nb_kernel333_x86_64_sse.o .libs/nb_kernel334_x86_64_sse.o .libs/nb_kernel400_x86_64_sse.o .libs/nb_kernel410_x86_64_sse.o .libs/nb_kernel430_x86_64_sse.o .libs/nb_kernel_x86_64_sse_test_asm.o .libs/nb_kernel_x86_64_sse.o ranlib .libs/libnb_kernel_x86_64_sse.a creating libnb_kernel_x86_64_sse.la (cd .libs && rm -f libnb_kernel_x86_64_sse.la && ln -s ../libnb_kernel_x86_64_sse.la libnb_kernel_x86_64_sse.la) make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' Making all in nb_kernel make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_metacode.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_metacode.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_common.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_common.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_declarations.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_declarations.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_outerloop.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_outerloop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_innerloop.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_innerloop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_interactions.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_interactions.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -o mknb mknb.o mknb_metacode.o mknb_common.o mknb_declarations.o mknb_outerloop.o mknb_innerloop.o mknb_interactions.o rm -f kernel-stamp ./mknb -software_invsqrt -fortran >>> Gromacs nonbonded kernel generator (-h for help) >>> Generating single precision functions in Fortran77. >>> Using Gromacs software version of 1/sqrt(x). 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`/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' /bin/sh ../../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel.lo ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel.c /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel010_f.lo nb_kernel010_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel020_f.lo nb_kernel020_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel030_f.lo nb_kernel030_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel100_f.lo nb_kernel100_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel101_f.lo nb_kernel101_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel102_f.lo nb_kernel102_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel103_f.lo nb_kernel103_f.f mkdir .libs f77 -pipe -Wall -g -O2 -c nb_kernel103_f.f -fPIC -o .libs/nb_kernel103_f.o f77 -pipe -Wall -g -O2 -c nb_kernel101_f.f -fPIC -o .libs/nb_kernel101_f.o f77 -pipe -Wall -g -O2 -c nb_kernel100_f.f -fPIC -o .libs/nb_kernel100_f.o f77 -pipe -Wall -g -O2 -c nb_kernel030_f.f -fPIC -o .libs/nb_kernel030_f.o f77 -pipe -Wall -g -O2 -c nb_kernel020_f.f -fPIC -o .libs/nb_kernel020_f.o nb_kernel103_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:278:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:265:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:274:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:261:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:258:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:276:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:275:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:273:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:264:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:279:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:277:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:268:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:271:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:267:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:269:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:272:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:270:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:282:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel.c -fPIC -DPIC -o .libs/nb_kernel.o nb_kernel101_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:144:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel030_f.f:320:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel101_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:278:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:265:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:274:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:261:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:258:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:276:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:275:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:273:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:264:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:279:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:277:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:268:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:271:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:267:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:269:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:272:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:270:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:282:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:218:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:234:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:221:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:230:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:219:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:217:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:214:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:232:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:231:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:202:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:229:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:220:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:189:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:198:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:235:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:233:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:222:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:238:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:196:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:185:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:182:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:200:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:199:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:197:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:188:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:203:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:201:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:192:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:195:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:191:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:193:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:196:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:194:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:206:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:212:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:199:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:208:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:197:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:195:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:192:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:210:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:209:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:207:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:198:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:213:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:211:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:205:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:200:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:206:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:216:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel010_f.f -fPIC -o .libs/nb_kernel010_f.o f77 -pipe -Wall -g -O2 -c nb_kernel102_f.f -fPIC -o .libs/nb_kernel102_f.o nb_kernel010_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:169:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:185:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:172:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:181:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:170:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:168:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:165:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:183:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:182:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:180:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:171:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:186:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:184:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:178:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:173:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:179:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:189:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:444:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:431:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:440:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:427:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:424:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:442:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:441:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:439:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:430:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:445:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:443:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:434:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:437:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:433:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:435:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:438:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:436:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:448:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel104_f.lo nb_kernel104_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel110_f.lo nb_kernel110_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel111_f.lo nb_kernel111_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel112_f.lo nb_kernel112_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel113_f.lo nb_kernel113_f.f f77 -pipe -Wall -g -O2 -c nb_kernel104_f.f -fPIC -o .libs/nb_kernel104_f.o f77 -pipe -Wall -g -O2 -c nb_kernel110_f.f -fPIC -o .libs/nb_kernel110_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel114_f.lo nb_kernel114_f.f nb_kernel110_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:218:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:205:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:214:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:201:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:198:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:216:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:215:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:213:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:204:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:219:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:217:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:211:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:212:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:222:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel120_f.lo nb_kernel120_f.f nb_kernel104_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:444:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:431:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:440:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:427:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:424:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:442:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:441:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:439:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:430:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:445:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:443:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:434:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:437:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:433:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:435:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:438:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:436:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:448:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel111_f.f -fPIC -o .libs/nb_kernel111_f.o f77 -pipe -Wall -g -O2 -c nb_kernel112_f.f -fPIC -o .libs/nb_kernel112_f.o f77 -pipe -Wall -g -O2 -c nb_kernel113_f.f -fPIC -o .libs/nb_kernel113_f.o nb_kernel111_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:294:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:281:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:290:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:277:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:274:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:292:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:291:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:289:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:280:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:295:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel114_f.f -fPIC -o .libs/nb_kernel114_f.o nb_kernel111_f.f:293:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:287:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:288:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:298:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel121_f.lo nb_kernel121_f.f nb_kernel112_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:458:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:445:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:454:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:441:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:438:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:456:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:455:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:453:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:444:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:459:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:457:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:451:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:452:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:462:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:320:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:307:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:316:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:303:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:300:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:318:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:317:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:315:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:306:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:321:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:319:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:313:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:314:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:324:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:488:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:475:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:484:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:471:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:468:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:486:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:485:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:483:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:474:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:489:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:487:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:481:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:482:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:492:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel120_f.f -fPIC -o .libs/nb_kernel120_f.o nb_kernel120_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:220:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:207:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:216:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:203:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:200:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:218:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:217:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:215:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:206:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:221:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:219:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:213:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:214:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:224:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel121_f.f -fPIC -o .libs/nb_kernel121_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel122_f.lo nb_kernel122_f.f nb_kernel121_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:296:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:283:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:292:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:279:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:276:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:294:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:293:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:291:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:282:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:297:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:295:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:289:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:290:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:300:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel123_f.lo nb_kernel123_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel124_f.lo nb_kernel124_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel130_f.lo nb_kernel130_f.f f77 -pipe -Wall -g -O2 -c nb_kernel124_f.f -fPIC -o .libs/nb_kernel124_f.o f77 -pipe -Wall -g -O2 -c nb_kernel123_f.f -fPIC -o .libs/nb_kernel123_f.o f77 -pipe -Wall -g -O2 -c nb_kernel122_f.f -fPIC -o .libs/nb_kernel122_f.o nb_kernel124_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:497:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:484:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:493:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:480:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:477:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:495:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:494:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:492:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:483:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:498:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:496:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:490:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:491:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:501:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:460:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:447:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:456:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:443:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:440:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:458:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:457:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:455:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:446:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:461:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:459:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:453:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:454:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:464:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:329:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:316:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:325:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:312:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:309:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:327:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:326:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:324:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:315:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:330:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:328:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:322:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:323:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:333:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel131_f.lo nb_kernel131_f.f f77 -pipe -Wall -g -O2 -c nb_kernel130_f.f -fPIC -o .libs/nb_kernel130_f.o nb_kernel130_f.f:153:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel130_f.f:338:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel130_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:245:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:232:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:241:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:228:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:225:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:243:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:242:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:240:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:231:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:246:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:244:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:249:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel132_f.lo nb_kernel132_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel133_f.lo nb_kernel133_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel134_f.lo nb_kernel134_f.f f77 -pipe -Wall -g -O2 -c nb_kernel131_f.f -fPIC -o .libs/nb_kernel131_f.o f77 -pipe -Wall -g -O2 -c nb_kernel132_f.f -fPIC -o .libs/nb_kernel132_f.o nb_kernel131_f.f:196:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel131_f.f:451:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel131_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:321:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:308:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:317:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:304:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:301:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:319:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:318:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:316:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:307:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:322:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:320:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:325:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel200_f.lo nb_kernel200_f.f f77 -pipe -Wall -g -O2 -c nb_kernel133_f.f -fPIC -o .libs/nb_kernel133_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel201_f.lo nb_kernel201_f.f nb_kernel132_f.f:275:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel132_f.f:694:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel132_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:485:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:472:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:481:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:468:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:465:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:483:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:482:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:480:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:471:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:486:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:484:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:489:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:210:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel133_f.f:494:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel133_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:352:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:339:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:348:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:335:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:332:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:350:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:349:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:347:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:338:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:353:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:351:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:356:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel202_f.lo nb_kernel202_f.f f77 -pipe -Wall -g -O2 -c nb_kernel134_f.f -fPIC -o .libs/nb_kernel134_f.o f77 -pipe -Wall -g -O2 -c nb_kernel200_f.f -fPIC -o .libs/nb_kernel200_f.o nb_kernel134_f.f:294:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel134_f.f:746:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel134_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:520:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:507:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:516:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:503:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:500:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:518:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:517:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:515:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:506:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:521:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:519:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:524:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:204:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:200:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:187:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:184:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:202:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:201:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:199:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:205:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:203:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:194:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:197:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:193:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:195:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:198:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:196:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:208:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel201_f.f -fPIC -o .libs/nb_kernel201_f.o nb_kernel201_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:282:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:278:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:265:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:262:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:280:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:279:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:277:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:283:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:281:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:272:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:275:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:271:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:273:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:276:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:274:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:286:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel203_f.lo nb_kernel203_f.f f77 -pipe -Wall -g -O2 -c nb_kernel202_f.f -fPIC -o .libs/nb_kernel202_f.o nb_kernel202_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:454:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:450:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:437:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:434:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:452:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:451:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:449:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:455:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:453:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:444:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:447:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:443:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:445:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:448:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:446:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:458:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel204_f.lo nb_kernel204_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel210_f.lo nb_kernel210_f.f f77 -pipe -Wall -g -O2 -c nb_kernel204_f.f -fPIC -o .libs/nb_kernel204_f.o f77 -pipe -Wall -g -O2 -c nb_kernel203_f.f -fPIC -o .libs/nb_kernel203_f.o nb_kernel203_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:282:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:278:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:265:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:262:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:280:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:279:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:277:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:283:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:281:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:272:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:275:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:271:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:273:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:276:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:274:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:286:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:454:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:450:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:437:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:434:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:452:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:451:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:449:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:455:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:453:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:444:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:447:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:443:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:445:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:448:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:446:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:458:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel210_f.f -fPIC -o .libs/nb_kernel210_f.o nb_kernel210_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:221:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:217:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:204:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:201:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:219:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:218:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:216:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:222:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:220:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:214:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:215:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:225:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel211_f.lo nb_kernel211_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel212_f.lo nb_kernel212_f.f f77 -pipe -Wall -g -O2 -c nb_kernel211_f.f -fPIC -o .libs/nb_kernel211_f.o f77 -pipe -Wall -g -O2 -c nb_kernel212_f.f -fPIC -o .libs/nb_kernel212_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel213_f.lo nb_kernel213_f.f nb_kernel211_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:299:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:295:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:282:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:279:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:297:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:296:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:294:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:300:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:298:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:292:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:293:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:303:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:469:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:465:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:452:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:449:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:467:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:466:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:464:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:470:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:468:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:462:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:463:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:473:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel213_f.f -fPIC -o .libs/nb_kernel213_f.o nb_kernel213_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel214_f.lo nb_kernel214_f.f nb_kernel213_f.f:324:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:320:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:307:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:304:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:322:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:321:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:319:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:325:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:323:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:317:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:318:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:328:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel220_f.lo nb_kernel220_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel221_f.lo nb_kernel221_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel222_f.lo nb_kernel222_f.f f77 -pipe -Wall -g -O2 -c nb_kernel214_f.f -fPIC -o .libs/nb_kernel214_f.o f77 -pipe -Wall -g -O2 -c nb_kernel220_f.f -fPIC -o .libs/nb_kernel220_f.o nb_kernel214_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:498:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:494:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:481:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:478:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:496:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:495:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:493:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:499:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:497:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:491:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:492:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:502:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:223:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:219:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:206:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:203:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:221:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:220:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:218:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:224:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:222:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:216:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:217:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:227:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel221_f.f -fPIC -o .libs/nb_kernel221_f.o nb_kernel221_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:301:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:297:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:284:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:281:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:299:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:298:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:296:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:302:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:300:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:294:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:295:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:305:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel222_f.f -fPIC -o .libs/nb_kernel222_f.o nb_kernel222_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:471:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:467:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:454:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:451:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:469:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:468:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:466:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:472:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:470:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:464:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:465:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:475:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel223_f.lo nb_kernel223_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel224_f.lo nb_kernel224_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel230_f.lo nb_kernel230_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel231_f.lo nb_kernel231_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel232_f.lo nb_kernel232_f.f f77 -pipe -Wall -g -O2 -c nb_kernel223_f.f -fPIC -o .libs/nb_kernel223_f.o f77 -pipe -Wall -g -O2 -c nb_kernel224_f.f -fPIC -o .libs/nb_kernel224_f.o nb_kernel223_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:333:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:329:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:316:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:313:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:331:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:330:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:328:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:334:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:332:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:326:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:327:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:337:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:507:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:503:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:490:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:487:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:505:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:504:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:502:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:508:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:506:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:500:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:501:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:511:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel231_f.f -fPIC -o .libs/nb_kernel231_f.o f77 -pipe -Wall -g -O2 -c nb_kernel230_f.f -fPIC -o .libs/nb_kernel230_f.o f77 -pipe -Wall -g -O2 -c nb_kernel232_f.f -fPIC -o .libs/nb_kernel232_f.o nb_kernel230_f.f:155:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel230_f.f:342:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel230_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:247:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:243:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:230:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:227:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:245:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:244:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:242:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:248:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:246:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:251:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:198:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel231_f.f:457:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel231_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:325:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:321:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:308:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:305:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:323:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:322:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:320:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:326:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:324:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:329:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel233_f.lo nb_kernel233_f.f nb_kernel232_f.f:277:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel232_f.f:706:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel232_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:495:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:491:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:478:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:475:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:493:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:492:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:490:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:496:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:494:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:499:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel234_f.lo nb_kernel234_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel300_f.lo nb_kernel300_f.f f77 -pipe -Wall -g -O2 -c nb_kernel233_f.f -fPIC -o .libs/nb_kernel233_f.o nb_kernel233_f.f:211:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel233_f.f:499:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel233_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:356:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:352:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:339:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:336:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:354:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:353:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:351:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:357:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:355:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:360:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel234_f.f -fPIC -o .libs/nb_kernel234_f.o nb_kernel234_f.f:295:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel234_f.f:757:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel234_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:530:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:526:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:513:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:510:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:528:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:527:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:525:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:531:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:529:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:534:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel301_f.lo nb_kernel301_f.f f77 -pipe -Wall -g -O2 -c nb_kernel300_f.f -fPIC -o .libs/nb_kernel300_f.o nb_kernel300_f.f:139:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel300_f.f:300:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel300_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:219:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:206:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:215:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:202:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:199:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:217:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:216:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:214:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:205:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:220:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:218:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:209:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:208:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:210:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:211:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:223:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel302_f.lo nb_kernel302_f.f f77 -pipe -Wall -g -O2 -c nb_kernel301_f.f -fPIC -o .libs/nb_kernel301_f.o nb_kernel301_f.f:182:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel303_f.lo nb_kernel303_f.f nb_kernel301_f.f:209:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:235:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:439:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:454:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:468:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:321:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:308:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:317:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:304:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:301:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:319:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:318:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:316:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:307:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:322:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:320:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:311:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:310:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:312:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:313:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:325:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel302_f.f -fPIC -o .libs/nb_kernel302_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel304_f.lo nb_kernel304_f.f nb_kernel302_f.f:263:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:290:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:317:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:344:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:371:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:398:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:425:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:452:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:479:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:764:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:779:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:794:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:809:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:824:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:839:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:854:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:869:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:884:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:565:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:552:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:561:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:548:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:545:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:563:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:562:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:560:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:551:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:566:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:564:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:555:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:554:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:556:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:557:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:569:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel303_f.f -fPIC -o .libs/nb_kernel303_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel310_f.lo nb_kernel310_f.f f77 -pipe -Wall -g -O2 -c nb_kernel304_f.f -fPIC -o .libs/nb_kernel304_f.o nb_kernel303_f.f:182:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:208:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:235:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:439:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:453:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:468:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:321:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:308:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:317:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:304:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:301:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:319:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:318:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:316:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:307:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:322:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:320:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:311:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:310:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:312:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:313:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:325:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:263:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:290:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:317:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:344:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:371:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:398:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:425:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:452:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:479:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:764:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:779:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:794:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:809:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:824:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:839:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:854:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:869:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:884:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:565:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:552:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:561:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:548:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:545:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:563:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:562:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:560:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:551:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:566:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:564:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:555:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:554:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:556:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:557:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:569:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel311_f.lo nb_kernel311_f.f f77 -pipe -Wall -g -O2 -c nb_kernel310_f.f -fPIC -o .libs/nb_kernel310_f.o nb_kernel310_f.f:152:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel310_f.f:332:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel310_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:238:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:225:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:234:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:221:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:218:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:236:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:235:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:233:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:224:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:239:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:237:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:242:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel311_f.f -fPIC -o .libs/nb_kernel311_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel312_f.lo nb_kernel312_f.f nb_kernel311_f.f:195:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:227:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:253:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:471:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:490:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:504:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:340:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:327:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:336:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:323:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:320:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:338:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:337:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:335:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:326:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:341:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:339:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:344:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel313_f.lo nb_kernel313_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel314_f.lo nb_kernel314_f.f f77 -pipe -Wall -g -O2 -c nb_kernel312_f.f -fPIC -o .libs/nb_kernel312_f.o f77 -pipe -Wall -g -O2 -c nb_kernel313_f.f -fPIC -o .libs/nb_kernel313_f.o nb_kernel312_f.f:274:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:306:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:333:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:360:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:387:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:414:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:441:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:468:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:495:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:792:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:811:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:826:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:841:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:856:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:871:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:886:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:901:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:916:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:582:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:569:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:578:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:565:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:562:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:580:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:579:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:577:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:568:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:583:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:581:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:586:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel320_f.lo nb_kernel320_f.f f77 -pipe -Wall -g -O2 -c nb_kernel314_f.f -fPIC -o .libs/nb_kernel314_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel321_f.lo nb_kernel321_f.f nb_kernel313_f.f:221:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:247:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:274:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:508:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:522:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:537:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:364:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:351:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:360:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:347:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:344:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:362:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:361:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:359:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:350:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:365:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:363:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:368:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:304:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:331:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:358:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:385:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:412:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:439:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:466:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:493:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:520:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:837:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:852:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:867:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:882:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:897:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:912:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:927:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:942:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:957:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel322_f.lo nb_kernel322_f.f nb_kernel314_f.f:610:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:597:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:606:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:593:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:590:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:608:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:607:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:605:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:596:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:611:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:609:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:614:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel320_f.f -fPIC -o .libs/nb_kernel320_f.o nb_kernel320_f.f:153:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel320_f.f:335:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel320_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:240:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:227:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:236:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:223:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:220:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:238:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:237:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:235:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:226:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:241:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:239:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:244:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel321_f.f -fPIC -o .libs/nb_kernel321_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel323_f.lo nb_kernel323_f.f nb_kernel321_f.f:196:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:229:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:255:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:474:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:494:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:508:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:342:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:329:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:338:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:325:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:322:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:340:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:339:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:337:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:328:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:343:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:341:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:346:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel322_f.f -fPIC -o .libs/nb_kernel322_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel324_f.lo nb_kernel324_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel330_f.lo nb_kernel330_f.f nb_kernel322_f.f:275:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel331_f.lo nb_kernel331_f.f nb_kernel322_f.f:308:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:335:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:362:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:389:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:416:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:443:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:470:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:497:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] f77 -pipe -Wall -g -O2 -c nb_kernel323_f.f -fPIC -o .libs/nb_kernel323_f.o nb_kernel322_f.f:795:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:815:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:830:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:845:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:860:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:875:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:890:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:905:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:920:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:584:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:571:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:580:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:567:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:564:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:582:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:581:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:579:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:570:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:585:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:583:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:588:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:230:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:256:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:283:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:526:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:540:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:555:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:373:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:360:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:369:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:356:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:353:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:371:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:370:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:368:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:359:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:374:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:372:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:377:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel324_f.f -fPIC -o .libs/nb_kernel324_f.o nb_kernel324_f.f:313:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:340:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:367:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:394:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:421:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:448:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:475:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:502:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:529:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:855:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] f77 -pipe -Wall -g -O2 -c nb_kernel330_f.f -fPIC -o .libs/nb_kernel330_f.o nb_kernel324_f.f:870:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:885:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:900:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:915:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:930:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:945:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:960:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:975:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:619:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:606:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:615:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:602:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:599:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:617:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:616:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:614:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:605:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:620:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:618:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:623:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:150:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel330_f.f:343:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel330_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:252:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:239:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:248:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:235:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:232:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:250:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:249:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:247:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:238:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:253:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:251:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:256:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel331_f.f -fPIC -o .libs/nb_kernel331_f.o nb_kernel331_f.f:193:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:241:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:267:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:482:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:514:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:528:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:354:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:341:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:350:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:337:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:334:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:352:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:351:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:349:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:340:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:355:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:353:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:358:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel332_f.lo nb_kernel332_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel333_f.lo nb_kernel333_f.f f77 -pipe -Wall -g -O2 -c nb_kernel333_f.f -fPIC -o .libs/nb_kernel333_f.o f77 -pipe -Wall -g -O2 -c nb_kernel332_f.f -fPIC -o .libs/nb_kernel332_f.o nb_kernel333_f.f:210:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:249:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:275:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:302:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:534:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:559:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:573:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:588:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:392:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:379:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:388:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:375:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:372:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:390:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:389:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:387:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:378:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:393:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:391:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:396:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:272:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:320:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:347:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:374:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:401:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:428:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:455:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:482:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:509:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:803:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:835:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:850:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:865:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:880:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:895:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:910:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:925:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:940:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:596:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:583:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:592:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:579:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:576:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:594:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:593:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:591:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:582:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:597:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:595:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:600:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel334_f.lo nb_kernel334_f.f f77 -pipe -Wall -g -O2 -c nb_kernel334_f.f -fPIC -o .libs/nb_kernel334_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel400_f.lo nb_kernel400_f.f nb_kernel334_f.f:294:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:332:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:359:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:386:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:413:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:440:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:467:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:494:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:521:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:548:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:864:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:888:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:903:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:918:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:933:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:948:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:963:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:978:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:993:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1008:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:638:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:625:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:634:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:621:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:618:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:636:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:635:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:633:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:624:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:639:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:637:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:642:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel410_f.lo nb_kernel410_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel420_f.lo nb_kernel420_f.f f77 -pipe -Wall -g -O2 -c nb_kernel410_f.f -fPIC -o .libs/nb_kernel410_f.o nb_kernel410_f.f:160:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel410_f.f:349:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel410_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:250:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:237:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:246:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:233:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:230:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:236:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:251:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:249:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:243:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:244:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:254:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel400_f.f -fPIC -o .libs/nb_kernel400_f.o f77 -pipe -Wall -g -O2 -c nb_kernel420_f.f -fPIC -o .libs/nb_kernel420_f.o nb_kernel400_f.f:147:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel400_f.f:317:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel400_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:231:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:218:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:227:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:214:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:211:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:217:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:232:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:230:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:221:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:224:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:220:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:222:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:225:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:223:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:235:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:161:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel420_f.f:352:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel420_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:252:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:239:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:248:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:235:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:232:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:238:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:253:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:251:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:245:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:246:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:256:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel430_f.lo nb_kernel430_f.f /bin/sh ../../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_f77sync.lo ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel_f77sync.c f77 -pipe -Wall -g -O2 -c nb_kernel430_f.f -fPIC -o .libs/nb_kernel430_f.o nb_kernel430_f.f:158:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:177:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:365:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:379:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:269:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:256:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:265:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:252:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:249:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:255:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:270:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:268:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:273:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel_f77sync.c -fPIC -DPIC -o .libs/nb_kernel_f77sync.o /bin/sh ../../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnb_kernel.la nb_kernel.lo nb_kernel010_f.lo nb_kernel020_f.lo nb_kernel030_f.lo nb_kernel100_f.lo nb_kernel101_f.lo nb_kernel102_f.lo nb_kernel103_f.lo nb_kernel104_f.lo nb_kernel110_f.lo nb_kernel111_f.lo nb_kernel112_f.lo nb_kernel113_f.lo nb_kernel114_f.lo nb_kernel120_f.lo nb_kernel121_f.lo nb_kernel122_f.lo nb_kernel123_f.lo nb_kernel124_f.lo nb_kernel130_f.lo nb_kernel131_f.lo nb_kernel132_f.lo nb_kernel133_f.lo nb_kernel134_f.lo nb_kernel200_f.lo nb_kernel201_f.lo nb_kernel202_f.lo nb_kernel203_f.lo nb_kernel204_f.lo nb_kernel210_f.lo nb_kernel211_f.lo nb_kernel212_f.lo nb_kernel213_f.lo nb_kernel214_f.lo nb_kernel220_f.lo nb_kernel221_f.lo nb_kernel222_f.lo nb_kernel223_f.lo nb_kernel224_f.lo nb_kernel230_f.lo nb_kernel231_f.lo nb_kernel232_f.lo nb_kernel233_f.lo nb_kernel234_f.lo nb_kernel300_f.lo nb_kernel301_f.lo nb_kernel302_f.lo nb_kernel303_f.lo nb_kernel304_f.lo nb_kernel310_f.lo nb_kernel311_f.lo nb_kernel312_f.lo nb_kernel313_f.lo nb_kernel314_f.lo nb_kernel320_f.lo nb_kernel321_f.lo nb_kernel322_f.lo nb_kernel323_f.lo nb_kernel324_f.lo nb_kernel330_f.lo nb_kernel331_f.lo nb_kernel332_f.lo nb_kernel333_f.lo nb_kernel334_f.lo nb_kernel400_f.lo nb_kernel410_f.lo nb_kernel420_f.lo nb_kernel430_f.lo nb_kernel_f77sync.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libnb_kernel.a .libs/nb_kernel.o .libs/nb_kernel010_f.o .libs/nb_kernel020_f.o .libs/nb_kernel030_f.o .libs/nb_kernel100_f.o .libs/nb_kernel101_f.o .libs/nb_kernel102_f.o .libs/nb_kernel103_f.o .libs/nb_kernel104_f.o .libs/nb_kernel110_f.o .libs/nb_kernel111_f.o .libs/nb_kernel112_f.o .libs/nb_kernel113_f.o .libs/nb_kernel114_f.o .libs/nb_kernel120_f.o .libs/nb_kernel121_f.o .libs/nb_kernel122_f.o .libs/nb_kernel123_f.o .libs/nb_kernel124_f.o .libs/nb_kernel130_f.o .libs/nb_kernel131_f.o .libs/nb_kernel132_f.o .libs/nb_kernel133_f.o .libs/nb_kernel134_f.o .libs/nb_kernel200_f.o .libs/nb_kernel201_f.o .libs/nb_kernel202_f.o .libs/nb_kernel203_f.o .libs/nb_kernel204_f.o .libs/nb_kernel210_f.o .libs/nb_kernel211_f.o .libs/nb_kernel212_f.o .libs/nb_kernel213_f.o .libs/nb_kernel214_f.o .libs/nb_kernel220_f.o .libs/nb_kernel221_f.o .libs/nb_kernel222_f.o .libs/nb_kernel223_f.o .libs/nb_kernel224_f.o .libs/nb_kernel230_f.o .libs/nb_kernel231_f.o .libs/nb_kernel232_f.o .libs/nb_kernel233_f.o .libs/nb_kernel234_f.o .libs/nb_kernel300_f.o .libs/nb_kernel301_f.o .libs/nb_kernel302_f.o .libs/nb_kernel303_f.o .libs/nb_kernel304_f.o .libs/nb_kernel310_f.o .libs/nb_kernel311_f.o .libs/nb_kernel312_f.o .libs/nb_kernel313_f.o .libs/nb_kernel314_f.o .libs/nb_kernel320_f.o .libs/nb_kernel321_f.o .libs/nb_kernel322_f.o .libs/nb_kernel323_f.o .libs/nb_kernel324_f.o .libs/nb_kernel330_f.o .libs/nb_kernel331_f.o .libs/nb_kernel332_f.o .libs/nb_kernel333_f.o .libs/nb_kernel334_f.o .libs/nb_kernel400_f.o .libs/nb_kernel410_f.o .libs/nb_kernel420_f.o .libs/nb_kernel430_f.o .libs/nb_kernel_f77sync.o ranlib .libs/libnb_kernel.a creating libnb_kernel.la (cd .libs && rm -f libnb_kernel.la && ln -s ../libnb_kernel.la libnb_kernel.la) make[6]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nonbonded.lo ../../../../src/gmxlib/nonbonded/nonbonded.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_free_energy.lo ../../../../src/gmxlib/nonbonded/nb_free_energy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_generic.lo ../../../../src/gmxlib/nonbonded/nb_generic.c mkdir .libs mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nonbonded.c -fPIC -DPIC -o .libs/nonbonded.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nb_free_energy.c -fPIC -DPIC -o .libs/nb_free_energy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nb_generic.c -fPIC -DPIC -o .libs/nb_generic.o ../../../../src/gmxlib/nonbonded/nonbonded.c: In function 'do_nonbonded': ../../../../src/gmxlib/nonbonded/nonbonded.c:283:18: warning: unused variable 'fp' [-Wunused-variable] FILE * fp; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:281:18: warning: unused variable 'bWater' [-Wunused-variable] bool bWater; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:279:43: warning: unused variable 'sz' [-Wunused-variable] int n,n0,n1,i,i0,i1,nrnb_ind,sz; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c: In function 'do_listed_vdw_q': ../../../../src/gmxlib/nonbonded/nonbonded.c:547:15: warning: unused variable 'tmplist' [-Wunused-variable] t_nblist tmplist; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:538:25: warning: unused variable 'i2' [-Wunused-variable] int i0=0,i1=1,i2=2; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nonbonded.c:50: ../../../../src/gmxlib/nonbonded/nonbonded.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nonbonded.c:50:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../../src/gmxlib/nonbonded/nonbonded.c:53:0: ../../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c: In function 'gmx_nb_generic_kernel': ../../../../src/gmxlib/nonbonded/nb_generic.c:82:16: warning: unused variable 'shift' [-Wunused-variable] int * shift; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c:62:25: warning: unused variable 'gbtabscale' [-Wunused-variable] real facel,gbtabscale; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c:61:19: warning: unused variable 'nri' [-Wunused-variable] int nri,ntype,table_nelements,icoul,ivdw; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nb_generic.c:43: ../../../../src/gmxlib/nonbonded/nb_generic.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nb_generic.c:43:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c: In function 'gmx_nb_free_energy_kernel': ../../../../src/gmxlib/nonbonded/nb_free_energy.c:100:25: warning: unused variable 'H' [-Wunused-variable] real Y,F,G,H,Fp,Geps,Heps2,eps,eps2,VV,FF; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:100:23: warning: unused variable 'G' [-Wunused-variable] real Y,F,G,H,Fp,Geps,Heps2,eps,eps2,VV,FF; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:89:19: warning: unused variable 'rinvsix' [-Wunused-variable] real rinvsix; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:86:27: warning: unused variable 'vcoul' [-Wunused-variable] real qqA,qqB,vcoul,vctot,krsq; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nb_free_energy.c:42: ../../../../src/gmxlib/nonbonded/nb_free_energy.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nb_free_energy.c:42:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnonbonded.la nonbonded.lo nb_free_energy.lo nb_generic.lo nb_kernel_x86_64_sse/libnb_kernel_x86_64_sse.la nb_kernel/libnb_kernel.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath rm -fr .libs/libnonbonded.lax mkdir .libs/libnonbonded.lax rm -fr .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a mkdir .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a (cd .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a && ar x /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/.libs/libnb_kernel_x86_64_sse.a) rm -fr .libs/libnonbonded.lax/libnb_kernel.a mkdir .libs/libnonbonded.lax/libnb_kernel.a (cd .libs/libnonbonded.lax/libnb_kernel.a && ar x /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel/.libs/libnb_kernel.a) ar cru .libs/libnonbonded.a .libs/nonbonded.o .libs/nb_free_energy.o .libs/nb_generic.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel_x86_64_sse_test_asm.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel430_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel410_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel400_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel334_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel333_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel332_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel331_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel330_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel314_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel313_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel312_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel311_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel310_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel304_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel303_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel302_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel301_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel300_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel234_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel233_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel232_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel231_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel230_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel214_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel213_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel212_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel211_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel210_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel204_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel203_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel202_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel201_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel200_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel134_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel133_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel132_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel131_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel130_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel114_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel113_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel112_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel111_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel110_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel104_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel103_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel102_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel101_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel100_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel030_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse.a/nb_kernel010_x86_64_sse.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel_f77sync.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel430_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel420_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel410_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel400_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel334_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel333_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel332_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel331_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel330_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel324_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel323_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel322_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel321_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel320_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel314_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel313_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel312_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel311_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel310_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel304_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel303_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel302_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel301_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel300_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel234_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel233_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel232_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel231_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel230_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel224_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel223_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel222_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel221_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel220_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel214_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel213_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel212_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel211_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel210_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel204_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel203_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel202_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel201_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel200_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel134_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel133_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel132_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel131_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel130_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel124_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel123_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel122_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel121_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel120_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel114_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel113_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel112_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel111_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel110_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel104_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel103_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel102_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel101_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel100_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel030_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel020_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel010_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel.o ranlib .libs/libnonbonded.a rm -fr .libs/libnonbonded.lax creating libnonbonded.la (cd .libs && rm -f libnonbonded.la && ln -s ../libnonbonded.la libnonbonded.la) make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' Making all in gmx_blas make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_blas' /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dasum.lo ../../../../src/gmxlib/gmx_blas/dasum.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dcopy.lo ../../../../src/gmxlib/gmx_blas/dcopy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgemm.lo ../../../../src/gmxlib/gmx_blas/dgemm.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dger.lo ../../../../src/gmxlib/gmx_blas/dger.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o drot.lo ../../../../src/gmxlib/gmx_blas/drot.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dswap.lo ../../../../src/gmxlib/gmx_blas/dswap.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyr2.lo ../../../../src/gmxlib/gmx_blas/dsyr2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrmm.lo ../../../../src/gmxlib/gmx_blas/dtrmm.c mkdir .libs mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/drot.c -fPIC -DPIC -o .libs/drot.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dasum.c -fPIC -DPIC -o .libs/dasum.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dger.c -fPIC -DPIC -o .libs/dger.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dgemm.c -fPIC -DPIC -o .libs/dgemm.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsyr2.c -fPIC -DPIC -o .libs/dsyr2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrmm.c -fPIC -DPIC -o .libs/dtrmm.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dswap.c -fPIC -DPIC -o .libs/dswap.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dcopy.c -fPIC -DPIC -o .libs/dcopy.o ../../../../src/gmxlib/gmx_blas/dtrmm.c: In function 'dtrmm_': ../../../../src/gmxlib/gmx_blas/dtrmm.c:32:9: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ ../../../../src/gmxlib/gmx_blas/dtrmm.c:29:20: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, k, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrsm.lo ../../../../src/gmxlib/gmx_blas/dtrsm.c ../../../../src/gmxlib/gmx_blas/dgemm.c: In function 'dgemm_': ../../../../src/gmxlib/gmx_blas/dgemm.c:27:19: warning: variable 'nrowb' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/dgemm.c:27:13: warning: variable 'ncola' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/dgemm.c:27:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o daxpy.lo ../../../../src/gmxlib/gmx_blas/daxpy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ddot.lo ../../../../src/gmxlib/gmx_blas/ddot.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgemv.lo ../../../../src/gmxlib/gmx_blas/dgemv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dnrm2.lo ../../../../src/gmxlib/gmx_blas/dnrm2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ddot.c -fPIC -DPIC -o .libs/ddot.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrsm.c -fPIC -DPIC -o .libs/dtrsm.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/daxpy.c -fPIC -DPIC -o .libs/daxpy.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dscal.lo ../../../../src/gmxlib/gmx_blas/dscal.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsymv.lo ../../../../src/gmxlib/gmx_blas/dsymv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyr2k.lo ../../../../src/gmxlib/gmx_blas/dsyr2k.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrmv.lo ../../../../src/gmxlib/gmx_blas/dtrmv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o idamax.lo ../../../../src/gmxlib/gmx_blas/idamax.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dgemv.c -fPIC -DPIC -o .libs/dgemv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsymv.c -fPIC -DPIC -o .libs/dsymv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dnrm2.c -fPIC -DPIC -o .libs/dnrm2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sasum.lo ../../../../src/gmxlib/gmx_blas/sasum.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dscal.c -fPIC -DPIC -o .libs/dscal.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o scopy.lo ../../../../src/gmxlib/gmx_blas/scopy.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsyr2k.c -fPIC -DPIC -o .libs/dsyr2k.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrmv.c -fPIC -DPIC -o .libs/dtrmv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/idamax.c -fPIC -DPIC -o .libs/idamax.o ../../../../src/gmxlib/gmx_blas/dtrmv.c: In function 'dtrmv_': ../../../../src/gmxlib/gmx_blas/dtrmv.c:18:29: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, ix, jx, kx, info; ^ ../../../../src/gmxlib/gmx_blas/dsyr2k.c: In function 'dsyr2k_': ../../../../src/gmxlib/gmx_blas/dsyr2k.c:23:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgemm.lo ../../../../src/gmxlib/gmx_blas/sgemm.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sger.lo ../../../../src/gmxlib/gmx_blas/sger.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o srot.lo ../../../../src/gmxlib/gmx_blas/srot.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sswap.lo ../../../../src/gmxlib/gmx_blas/sswap.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/scopy.c -fPIC -DPIC -o .libs/scopy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sasum.c -fPIC -DPIC -o .libs/sasum.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyr2.lo ../../../../src/gmxlib/gmx_blas/ssyr2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strmm.lo ../../../../src/gmxlib/gmx_blas/strmm.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sgemm.c -fPIC -DPIC -o .libs/sgemm.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sswap.c -fPIC -DPIC -o .libs/sswap.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/srot.c -fPIC -DPIC -o .libs/srot.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sger.c -fPIC -DPIC -o .libs/sger.o ../../../../src/gmxlib/gmx_blas/sgemm.c: In function 'sgemm_': ../../../../src/gmxlib/gmx_blas/sgemm.c:26:19: warning: variable 'nrowb' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/sgemm.c:26:13: warning: variable 'ncola' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/sgemm.c:26:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strsm.lo ../../../../src/gmxlib/gmx_blas/strsm.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o saxpy.lo ../../../../src/gmxlib/gmx_blas/saxpy.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssyr2.c -fPIC -DPIC -o .libs/ssyr2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sdot.lo ../../../../src/gmxlib/gmx_blas/sdot.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgemv.lo ../../../../src/gmxlib/gmx_blas/sgemv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o snrm2.lo ../../../../src/gmxlib/gmx_blas/snrm2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/saxpy.c -fPIC -DPIC -o .libs/saxpy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strsm.c -fPIC -DPIC -o .libs/strsm.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strmm.c -fPIC -DPIC -o .libs/strmm.o ../../../../src/gmxlib/gmx_blas/strmm.c: In function 'strmm_': ../../../../src/gmxlib/gmx_blas/strmm.c:31:9: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ ../../../../src/gmxlib/gmx_blas/strmm.c:28:20: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, k, info; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sdot.c -fPIC -DPIC -o .libs/sdot.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sscal.lo ../../../../src/gmxlib/gmx_blas/sscal.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssymv.lo ../../../../src/gmxlib/gmx_blas/ssymv.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/snrm2.c -fPIC -DPIC -o .libs/snrm2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sgemv.c -fPIC -DPIC -o .libs/sgemv.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyr2k.lo ../../../../src/gmxlib/gmx_blas/ssyr2k.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strmv.lo ../../../../src/gmxlib/gmx_blas/strmv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o isamax.lo ../../../../src/gmxlib/gmx_blas/isamax.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssymv.c -fPIC -DPIC -o .libs/ssymv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssyr2k.c -fPIC -DPIC -o .libs/ssyr2k.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sscal.c -fPIC -DPIC -o .libs/sscal.o ../../../../src/gmxlib/gmx_blas/ssyr2k.c: In function 'ssyr2k_': ../../../../src/gmxlib/gmx_blas/ssyr2k.c:22:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strmv.c -fPIC -DPIC -o .libs/strmv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/isamax.c -fPIC -DPIC -o .libs/isamax.o ../../../../src/gmxlib/gmx_blas/strmv.c: In function 'strmv_': ../../../../src/gmxlib/gmx_blas/strmv.c:18:29: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, ix, jx, kx, info; ^ /bin/sh ../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libblas.la dasum.lo dcopy.lo dgemm.lo dger.lo drot.lo dswap.lo dsyr2.lo dtrmm.lo dtrsm.lo daxpy.lo ddot.lo dgemv.lo dnrm2.lo dscal.lo dsymv.lo dsyr2k.lo dtrmv.lo idamax.lo sasum.lo scopy.lo sgemm.lo sger.lo srot.lo sswap.lo ssyr2.lo strmm.lo strsm.lo saxpy.lo sdot.lo sgemv.lo snrm2.lo sscal.lo ssymv.lo ssyr2k.lo strmv.lo isamax.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libblas.a .libs/dasum.o .libs/dcopy.o .libs/dgemm.o .libs/dger.o .libs/drot.o .libs/dswap.o .libs/dsyr2.o .libs/dtrmm.o .libs/dtrsm.o .libs/daxpy.o .libs/ddot.o .libs/dgemv.o .libs/dnrm2.o .libs/dscal.o .libs/dsymv.o .libs/dsyr2k.o .libs/dtrmv.o .libs/idamax.o .libs/sasum.o .libs/scopy.o .libs/sgemm.o .libs/sger.o .libs/srot.o .libs/sswap.o .libs/ssyr2.o .libs/strmm.o .libs/strsm.o .libs/saxpy.o .libs/sdot.o .libs/sgemv.o .libs/snrm2.o .libs/sscal.o .libs/ssymv.o .libs/ssyr2k.o .libs/strmv.o .libs/isamax.o ranlib .libs/libblas.a creating libblas.la (cd .libs && rm -f libblas.la && ln -s ../libblas.la libblas.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_blas' Making all in gmx_lapack make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_lapack' /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dbdsdc.lo ../../../../src/gmxlib/gmx_lapack/dbdsdc.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetf2.lo ../../../../src/gmxlib/gmx_lapack/dgetf2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlamrg.lo ../../../../src/gmxlib/gmx_lapack/dlamrg.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarnv.lo ../../../../src/gmxlib/gmx_lapack/dlarnv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd0.lo ../../../../src/gmxlib/gmx_lapack/dlasd0.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasda.lo ../../../../src/gmxlib/gmx_lapack/dlasda.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq6.lo ../../../../src/gmxlib/gmx_lapack/dlasq6.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgl2.lo ../../../../src/gmxlib/gmx_lapack/dorgl2.c mkdir .libs mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlamrg.c -fPIC -DPIC -o .libs/dlamrg.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd0.c -fPIC -DPIC -o .libs/dlasd0.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetf2.c -fPIC -DPIC -o .libs/dgetf2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq6.c -fPIC -DPIC -o .libs/dlasq6.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgl2.c -fPIC -DPIC -o .libs/dorgl2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasda.c -fPIC -DPIC -o .libs/dlasda.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarnv.c -fPIC -DPIC -o .libs/dlarnv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dbdsdc.c -fPIC -DPIC -o .libs/dbdsdc.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormqr.lo ../../../../src/gmxlib/gmx_lapack/dormqr.c ../../../../src/gmxlib/gmx_lapack/dgetf2.c: In function 'dgetf2_': ../../../../src/gmxlib/gmx_lapack/dgetf2.c:17:10: warning: variable 'one' set but not used [-Wunused-but-set-variable] double one,minusone; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dbdsqr.lo ../../../../src/gmxlib/gmx_lapack/dbdsqr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetrf.lo ../../../../src/gmxlib/gmx_lapack/dgetrf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlange.lo ../../../../src/gmxlib/gmx_lapack/dlange.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormqr.c -fPIC -DPIC -o .libs/dormqr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd1.lo ../../../../src/gmxlib/gmx_lapack/dlasd1.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dbdsqr.c -fPIC -DPIC -o .libs/dbdsqr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrtri.lo ../../../../src/gmxlib/gmx_lapack/dtrtri.c ../../../../src/gmxlib/gmx_lapack/dbdsqr.c: In function 'dbdsqr_': ../../../../src/gmxlib/gmx_lapack/dbdsqr.c:61:12: warning: unused variable 'ftmp' [-Wunused-variable] double ftmp; ^ ../../../../src/gmxlib/gmx_lapack/dbdsqr.c:59:12: warning: variable 'sminlo' set but not used [-Wunused-but-set-variable] double sminlo, tolmul; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasdq.lo ../../../../src/gmxlib/gmx_lapack/dlasdq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasr.lo ../../../../src/gmxlib/gmx_lapack/dlasr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetrf.c -fPIC -DPIC -o .libs/dgetrf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorglq.lo ../../../../src/gmxlib/gmx_lapack/dorglq.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlange.c -fPIC -DPIC -o .libs/dlange.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd1.c -fPIC -DPIC -o .libs/dlasd1.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasdq.c -fPIC -DPIC -o .libs/dlasdq.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dtrtri.c -fPIC -DPIC -o .libs/dtrtri.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasr.c -fPIC -DPIC -o .libs/dlasr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormtr.lo ../../../../src/gmxlib/gmx_lapack/dormtr.c ../../../../src/gmxlib/gmx_lapack/dlasr.c: In function 'dlasr_': ../../../../src/gmxlib/gmx_lapack/dlasr.c:21:17: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, info; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorglq.c -fPIC -DPIC -o .libs/dorglq.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgebd2.lo ../../../../src/gmxlib/gmx_lapack/dgebd2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlabrd.lo ../../../../src/gmxlib/gmx_lapack/dlabrd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormtr.c -fPIC -DPIC -o .libs/dormtr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlanst.lo ../../../../src/gmxlib/gmx_lapack/dlanst.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd2.lo ../../../../src/gmxlib/gmx_lapack/dlasd2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasdt.lo ../../../../src/gmxlib/gmx_lapack/dlasdt.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasrt.lo ../../../../src/gmxlib/gmx_lapack/dlasrt.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlanst.c -fPIC -DPIC -o .libs/dlanst.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgqr.lo ../../../../src/gmxlib/gmx_lapack/dorgqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgebd2.c -fPIC -DPIC -o .libs/dgebd2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlabrd.c -fPIC -DPIC -o .libs/dlabrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd2.c -fPIC -DPIC -o .libs/dlasd2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasdt.c -fPIC -DPIC -o .libs/dlasdt.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasrt.c -fPIC -DPIC -o .libs/dlasrt.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dstebz.lo ../../../../src/gmxlib/gmx_lapack/dstebz.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgebrd.lo ../../../../src/gmxlib/gmx_lapack/dgebrd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgqr.c -fPIC -DPIC -o .libs/dorgqr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsytrd.lo ../../../../src/gmxlib/gmx_lapack/dsytrd.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlacpy.lo ../../../../src/gmxlib/gmx_lapack/dlacpy.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dstebz.c -fPIC -DPIC -o .libs/dstebz.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlapy2.lo ../../../../src/gmxlib/gmx_lapack/dlapy2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgebrd.c -fPIC -DPIC -o .libs/dgebrd.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd3.lo ../../../../src/gmxlib/gmx_lapack/dlasd3.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsytrd.c -fPIC -DPIC -o .libs/dsytrd.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaset.lo ../../../../src/gmxlib/gmx_lapack/dlaset.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlacpy.c -fPIC -DPIC -o .libs/dlacpy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlapy2.c -fPIC -DPIC -o .libs/dlapy2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlassq.lo ../../../../src/gmxlib/gmx_lapack/dlassq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorm2l.lo ../../../../src/gmxlib/gmx_lapack/dorm2l.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd3.c -fPIC -DPIC -o .libs/dlasd3.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaset.c -fPIC -DPIC -o .libs/dlaset.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetrs.lo ../../../../src/gmxlib/gmx_lapack/dgetrs.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dstegr.lo ../../../../src/gmxlib/gmx_lapack/dstegr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgelq2.lo ../../../../src/gmxlib/gmx_lapack/dgelq2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlae2.lo ../../../../src/gmxlib/gmx_lapack/dlae2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorm2l.c -fPIC -DPIC -o .libs/dorm2l.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlassq.c -fPIC -DPIC -o .libs/dlassq.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd4.lo ../../../../src/gmxlib/gmx_lapack/dlasd4.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetrs.c -fPIC -DPIC -o .libs/dgetrs.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq1.lo ../../../../src/gmxlib/gmx_lapack/dlasq1.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrti2.lo ../../../../src/gmxlib/gmx_lapack/dtrti2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dstegr.c -fPIC -DPIC -o .libs/dstegr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlae2.c -fPIC -DPIC -o .libs/dlae2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetri.lo ../../../../src/gmxlib/gmx_lapack/dgetri.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgelq2.c -fPIC -DPIC -o .libs/dgelq2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasv2.lo ../../../../src/gmxlib/gmx_lapack/dlasv2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd4.c -fPIC -DPIC -o .libs/dlasd4.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorm2r.lo ../../../../src/gmxlib/gmx_lapack/dorm2r.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dtrti2.c -fPIC -DPIC -o .libs/dtrti2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dstein.lo ../../../../src/gmxlib/gmx_lapack/dstein.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq1.c -fPIC -DPIC -o .libs/dlasq1.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetri.c -fPIC -DPIC -o .libs/dgetri.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgelqf.lo ../../../../src/gmxlib/gmx_lapack/dgelqf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaebz.lo ../../../../src/gmxlib/gmx_lapack/dlaebz.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasv2.c -fPIC -DPIC -o .libs/dlasv2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorm2r.c -fPIC -DPIC -o .libs/dorm2r.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dstein.c -fPIC -DPIC -o .libs/dstein.o ../../../../src/gmxlib/gmx_lapack/dorm2r.c: In function 'dorm2r_': ../../../../src/gmxlib/gmx_lapack/dorm2r.c:19:42: warning: variable 'nq' set but not used [-Wunused-but-set-variable] int i__, i1, i2, i3, ic, jc, mi, ni, nq; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarf.lo ../../../../src/gmxlib/gmx_lapack/dlarf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlartg.lo ../../../../src/gmxlib/gmx_lapack/dlartg.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgelqf.c -fPIC -DPIC -o .libs/dgelqf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd5.lo ../../../../src/gmxlib/gmx_lapack/dlasd5.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaebz.c -fPIC -DPIC -o .libs/dlaebz.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq2.lo ../../../../src/gmxlib/gmx_lapack/dlasq2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarf.c -fPIC -DPIC -o .libs/dlarf.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlartg.c -fPIC -DPIC -o .libs/dlartg.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd5.c -fPIC -DPIC -o .libs/dlasd5.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaswp.lo ../../../../src/gmxlib/gmx_lapack/dlaswp.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormbr.lo ../../../../src/gmxlib/gmx_lapack/dormbr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq2.c -fPIC -DPIC -o .libs/dlasq2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsterf.lo ../../../../src/gmxlib/gmx_lapack/dsterf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgeqr2.lo ../../../../src/gmxlib/gmx_lapack/dgeqr2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormbr.c -fPIC -DPIC -o .libs/dormbr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsterf.c -fPIC -DPIC -o .libs/dsterf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaed6.lo ../../../../src/gmxlib/gmx_lapack/dlaed6.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgeqr2.c -fPIC -DPIC -o .libs/dgeqr2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarfb.lo ../../../../src/gmxlib/gmx_lapack/dlarfb.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaswp.c -fPIC -DPIC -o .libs/dlaswp.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaruv.lo ../../../../src/gmxlib/gmx_lapack/dlaruv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd6.lo ../../../../src/gmxlib/gmx_lapack/dlasd6.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq3.lo ../../../../src/gmxlib/gmx_lapack/dlasq3.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlatrd.lo ../../../../src/gmxlib/gmx_lapack/dlatrd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarfb.c -fPIC -DPIC -o .libs/dlarfb.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaed6.c -fPIC -DPIC -o .libs/dlaed6.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaruv.c -fPIC -DPIC -o .libs/dlaruv.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorml2.lo ../../../../src/gmxlib/gmx_lapack/dorml2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq3.c -fPIC -DPIC -o .libs/dlasq3.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlatrd.c -fPIC -DPIC -o .libs/dlatrd.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dstevr.lo ../../../../src/gmxlib/gmx_lapack/dstevr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd6.c -fPIC -DPIC -o .libs/dlasd6.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgeqrf.lo ../../../../src/gmxlib/gmx_lapack/dgeqrf.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorml2.c -fPIC -DPIC -o .libs/dorml2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlagtf.lo ../../../../src/gmxlib/gmx_lapack/dlagtf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarfg.lo ../../../../src/gmxlib/gmx_lapack/dlarfg.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlas2.lo ../../../../src/gmxlib/gmx_lapack/dlas2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dstevr.c -fPIC -DPIC -o .libs/dstevr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd7.lo ../../../../src/gmxlib/gmx_lapack/dlasd7.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgeqrf.c -fPIC -DPIC -o .libs/dgeqrf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq4.lo ../../../../src/gmxlib/gmx_lapack/dlasq4.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlagtf.c -fPIC -DPIC -o .libs/dlagtf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorg2r.lo ../../../../src/gmxlib/gmx_lapack/dorg2r.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlas2.c -fPIC -DPIC -o .libs/dlas2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarfg.c -fPIC -DPIC -o .libs/dlarfg.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormlq.lo ../../../../src/gmxlib/gmx_lapack/dormlq.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd7.c -fPIC -DPIC -o .libs/dlasd7.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsytd2.lo ../../../../src/gmxlib/gmx_lapack/dsytd2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq4.c -fPIC -DPIC -o .libs/dlasq4.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgesdd.lo ../../../../src/gmxlib/gmx_lapack/dgesdd.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlagts.lo ../../../../src/gmxlib/gmx_lapack/dlagts.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarft.lo ../../../../src/gmxlib/gmx_lapack/dlarft.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorg2r.c -fPIC -DPIC -o .libs/dorg2r.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlascl.lo ../../../../src/gmxlib/gmx_lapack/dlascl.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormlq.c -fPIC -DPIC -o .libs/dormlq.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsytd2.c -fPIC -DPIC -o .libs/dsytd2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarft.c -fPIC -DPIC -o .libs/dlarft.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgesdd.c -fPIC -DPIC -o .libs/dgesdd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlagts.c -fPIC -DPIC -o .libs/dlagts.o ../../../../src/gmxlib/gmx_lapack/dgesdd.c: In function 'dgesdd_': ../../../../src/gmxlib/gmx_lapack/dgesdd.c:40:9: warning: variable 'wntqas' set but not used [-Wunused-but-set-variable] int wntqas, lquery; ^ ../../../../src/gmxlib/gmx_lapack/dgesdd.c:38:9: warning: variable 'minwrk' set but not used [-Wunused-but-set-variable] int minwrk, ldwrku, maxwrk, ldwkvt; ^ ../../../../src/gmxlib/gmx_lapack/dgesdd.c:35:16: warning: variable 'wntqo' set but not used [-Wunused-but-set-variable] int wntqn, wntqo, wntqs; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd8.lo ../../../../src/gmxlib/gmx_lapack/dlasd8.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlascl.c -fPIC -DPIC -o .libs/dlascl.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq5.lo ../../../../src/gmxlib/gmx_lapack/dlasq5.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgbr.lo ../../../../src/gmxlib/gmx_lapack/dorgbr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormql.lo ../../../../src/gmxlib/gmx_lapack/dormql.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd8.c -fPIC -DPIC -o .libs/dlasd8.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaev2.lo ../../../../src/gmxlib/gmx_lapack/dlaev2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq5.c -fPIC -DPIC -o .libs/dlasq5.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsteqr.lo ../../../../src/gmxlib/gmx_lapack/dsteqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgbr.c -fPIC -DPIC -o .libs/dorgbr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyevr.lo ../../../../src/gmxlib/gmx_lapack/dsyevr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasrt2.lo ../../../../src/gmxlib/gmx_lapack/dlasrt2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormql.c -fPIC -DPIC -o .libs/dormql.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlansy.lo ../../../../src/gmxlib/gmx_lapack/dlansy.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaev2.c -fPIC -DPIC -o .libs/dlaev2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlar1vx.lo ../../../../src/gmxlib/gmx_lapack/dlar1vx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsteqr.c -fPIC -DPIC -o .libs/dsteqr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrbx.lo ../../../../src/gmxlib/gmx_lapack/dlarrbx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsyevr.c -fPIC -DPIC -o .libs/dsyevr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasrt2.c -fPIC -DPIC -o .libs/dlasrt2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlansy.c -fPIC -DPIC -o .libs/dlansy.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrex.lo ../../../../src/gmxlib/gmx_lapack/dlarrex.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrfx.lo ../../../../src/gmxlib/gmx_lapack/dlarrfx.c ../../../../src/gmxlib/gmx_lapack/dsyevr.c: In function 'dsyevr_': ../../../../src/gmxlib/gmx_lapack/dsyevr.c:36:12: warning: variable 'abstll' set but not used [-Wunused-but-set-variable] double abstll, bignum; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:33:17: warning: variable 'ieeeok' set but not used [-Wunused-but-set-variable] int iscale, ieeeok, indibl, indifl; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:21:22: warning: variable 'vuu' set but not used [-Wunused-but-set-variable] double eps, vll, vuu, tmp1; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:21:17: warning: variable 'vll' set but not used [-Wunused-but-set-variable] double eps, vll, vuu, tmp1; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrvx.lo ../../../../src/gmxlib/gmx_lapack/dlarrvx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlar1vx.c -fPIC -DPIC -o .libs/dlar1vx.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrbx.c -fPIC -DPIC -o .libs/dlarrbx.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrex.c -fPIC -DPIC -o .libs/dlarrex.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrfx.c -fPIC -DPIC -o .libs/dlarrfx.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sbdsdc.lo ../../../../src/gmxlib/gmx_lapack/sbdsdc.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrvx.c -fPIC -DPIC -o .libs/dlarrvx.o ../../../../src/gmxlib/gmx_lapack/dlarrbx.c: In function 'dlarrbx_': ../../../../src/gmxlib/gmx_lapack/dlarrbx.c:36:33: warning: variable 'error' set but not used [-Wunused-but-set-variable] double right, width, dplus, error; ^ ../../../../src/gmxlib/gmx_lapack/dlarrbx.c:34:12: warning: variable 'eps' set but not used [-Wunused-but-set-variable] double eps, tmp, left; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sbdsdc.c -fPIC -DPIC -o .libs/sbdsdc.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetf2.lo ../../../../src/gmxlib/gmx_lapack/sgetf2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slamrg.lo ../../../../src/gmxlib/gmx_lapack/slamrg.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarnv.lo ../../../../src/gmxlib/gmx_lapack/slarnv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd0.lo ../../../../src/gmxlib/gmx_lapack/slasd0.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetf2.c -fPIC -DPIC -o .libs/sgetf2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarnv.c -fPIC -DPIC -o .libs/slarnv.o ../../../../src/gmxlib/gmx_lapack/sgetf2.c: In function 'sgetf2_': ../../../../src/gmxlib/gmx_lapack/sgetf2.c:17:9: warning: variable 'one' set but not used [-Wunused-but-set-variable] float one,minusone; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasda.lo ../../../../src/gmxlib/gmx_lapack/slasda.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slamrg.c -fPIC -DPIC -o .libs/slamrg.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq6.lo ../../../../src/gmxlib/gmx_lapack/slasq6.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgl2.lo ../../../../src/gmxlib/gmx_lapack/sorgl2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormqr.lo ../../../../src/gmxlib/gmx_lapack/sormqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd0.c -fPIC -DPIC -o .libs/slasd0.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sbdsqr.lo ../../../../src/gmxlib/gmx_lapack/sbdsqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq6.c -fPIC -DPIC -o .libs/slasq6.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetrf.lo ../../../../src/gmxlib/gmx_lapack/sgetrf.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasda.c -fPIC -DPIC -o .libs/slasda.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormqr.c -fPIC -DPIC -o .libs/sormqr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgl2.c -fPIC -DPIC -o .libs/sorgl2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slange.lo ../../../../src/gmxlib/gmx_lapack/slange.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd1.lo ../../../../src/gmxlib/gmx_lapack/slasd1.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssytrd.lo ../../../../src/gmxlib/gmx_lapack/ssytrd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sbdsqr.c -fPIC -DPIC -o .libs/sbdsqr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetrf.c -fPIC -DPIC -o .libs/sgetrf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasdq.lo ../../../../src/gmxlib/gmx_lapack/slasdq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasr.lo ../../../../src/gmxlib/gmx_lapack/slasr.c ../../../../src/gmxlib/gmx_lapack/sbdsqr.c: In function 'sbdsqr_': ../../../../src/gmxlib/gmx_lapack/sbdsqr.c:61:11: warning: unused variable 'ftmp' [-Wunused-variable] float ftmp; ^ ../../../../src/gmxlib/gmx_lapack/sbdsqr.c:59:11: warning: variable 'sminlo' set but not used [-Wunused-but-set-variable] float sminlo, tolmul; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorglq.lo ../../../../src/gmxlib/gmx_lapack/sorglq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormtr.lo ../../../../src/gmxlib/gmx_lapack/sormtr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd1.c -fPIC -DPIC -o .libs/slasd1.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slange.c -fPIC -DPIC -o .libs/slange.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssytrd.c -fPIC -DPIC -o .libs/ssytrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasdq.c -fPIC -DPIC -o .libs/slasdq.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasr.c -fPIC -DPIC -o .libs/slasr.o ../../../../src/gmxlib/gmx_lapack/slasr.c: In function 'slasr_': ../../../../src/gmxlib/gmx_lapack/slasr.c:21:17: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, info; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormtr.c -fPIC -DPIC -o .libs/sormtr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorglq.c -fPIC -DPIC -o .libs/sorglq.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgebd2.lo ../../../../src/gmxlib/gmx_lapack/sgebd2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slabrd.lo ../../../../src/gmxlib/gmx_lapack/slabrd.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slanst.lo ../../../../src/gmxlib/gmx_lapack/slanst.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd2.lo ../../../../src/gmxlib/gmx_lapack/slasd2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasdt.lo ../../../../src/gmxlib/gmx_lapack/slasdt.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasrt.lo ../../../../src/gmxlib/gmx_lapack/slasrt.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgebd2.c -fPIC -DPIC -o .libs/sgebd2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slabrd.c -fPIC -DPIC -o .libs/slabrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slanst.c -fPIC -DPIC -o .libs/slanst.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgqr.lo ../../../../src/gmxlib/gmx_lapack/sorgqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasdt.c -fPIC -DPIC -o .libs/slasdt.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd2.c -fPIC -DPIC -o .libs/slasd2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstebz.lo ../../../../src/gmxlib/gmx_lapack/sstebz.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasrt.c -fPIC -DPIC -o .libs/slasrt.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgebrd.lo ../../../../src/gmxlib/gmx_lapack/sgebrd.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetrs.lo ../../../../src/gmxlib/gmx_lapack/sgetrs.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgqr.c -fPIC -DPIC -o .libs/sorgqr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slacpy.lo ../../../../src/gmxlib/gmx_lapack/slacpy.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstebz.c -fPIC -DPIC -o .libs/sstebz.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slapy2.lo ../../../../src/gmxlib/gmx_lapack/slapy2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd3.lo ../../../../src/gmxlib/gmx_lapack/slasd3.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetrs.c -fPIC -DPIC -o .libs/sgetrs.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgebrd.c -fPIC -DPIC -o .libs/sgebrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slacpy.c -fPIC -DPIC -o .libs/slacpy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slapy2.c -fPIC -DPIC -o .libs/slapy2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd3.c -fPIC -DPIC -o .libs/slasd3.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaset.lo ../../../../src/gmxlib/gmx_lapack/slaset.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slassq.lo ../../../../src/gmxlib/gmx_lapack/slassq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorm2l.lo ../../../../src/gmxlib/gmx_lapack/sorm2l.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetri.lo ../../../../src/gmxlib/gmx_lapack/sgetri.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstegr.lo ../../../../src/gmxlib/gmx_lapack/sstegr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaset.c -fPIC -DPIC -o .libs/slaset.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgelq2.lo ../../../../src/gmxlib/gmx_lapack/sgelq2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorm2l.c -fPIC -DPIC -o .libs/sorm2l.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slae2.lo ../../../../src/gmxlib/gmx_lapack/slae2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd4.lo ../../../../src/gmxlib/gmx_lapack/slasd4.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slassq.c -fPIC -DPIC -o .libs/slassq.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetri.c -fPIC -DPIC -o .libs/sgetri.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstegr.c -fPIC -DPIC -o .libs/sstegr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq1.lo ../../../../src/gmxlib/gmx_lapack/slasq1.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgelq2.c -fPIC -DPIC -o .libs/sgelq2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strti2.lo ../../../../src/gmxlib/gmx_lapack/strti2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strtri.lo ../../../../src/gmxlib/gmx_lapack/strtri.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasv2.lo ../../../../src/gmxlib/gmx_lapack/slasv2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slae2.c -fPIC -DPIC -o .libs/slae2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd4.c -fPIC -DPIC -o .libs/slasd4.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq1.c -fPIC -DPIC -o .libs/slasq1.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/strti2.c -fPIC -DPIC -o .libs/strti2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorm2r.lo ../../../../src/gmxlib/gmx_lapack/sorm2r.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstein.lo ../../../../src/gmxlib/gmx_lapack/sstein.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/strtri.c -fPIC -DPIC -o .libs/strtri.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgelqf.lo ../../../../src/gmxlib/gmx_lapack/sgelqf.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasv2.c -fPIC -DPIC -o .libs/slasv2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaebz.lo ../../../../src/gmxlib/gmx_lapack/slaebz.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarf.lo ../../../../src/gmxlib/gmx_lapack/slarf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slartg.lo ../../../../src/gmxlib/gmx_lapack/slartg.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorm2r.c -fPIC -DPIC -o .libs/sorm2r.o ../../../../src/gmxlib/gmx_lapack/sorm2r.c: In function 'sorm2r_': ../../../../src/gmxlib/gmx_lapack/sorm2r.c:19:42: warning: variable 'nq' set but not used [-Wunused-but-set-variable] int i__, i1, i2, i3, ic, jc, mi, ni, nq; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstein.c -fPIC -DPIC -o .libs/sstein.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd5.lo ../../../../src/gmxlib/gmx_lapack/slasd5.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgelqf.c -fPIC -DPIC -o .libs/sgelqf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq2.lo ../../../../src/gmxlib/gmx_lapack/slasq2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaebz.c -fPIC -DPIC -o .libs/slaebz.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarf.c -fPIC -DPIC -o .libs/slarf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaswp.lo ../../../../src/gmxlib/gmx_lapack/slaswp.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slartg.c -fPIC -DPIC -o .libs/slartg.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq2.c -fPIC -DPIC -o .libs/slasq2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd5.c -fPIC -DPIC -o .libs/slasd5.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormbr.lo ../../../../src/gmxlib/gmx_lapack/sormbr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssterf.lo ../../../../src/gmxlib/gmx_lapack/ssterf.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaswp.c -fPIC -DPIC -o .libs/slaswp.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormbr.c -fPIC -DPIC -o .libs/sormbr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgeqr2.lo ../../../../src/gmxlib/gmx_lapack/sgeqr2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaed6.lo ../../../../src/gmxlib/gmx_lapack/slaed6.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarfb.lo ../../../../src/gmxlib/gmx_lapack/slarfb.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaruv.lo ../../../../src/gmxlib/gmx_lapack/slaruv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd6.lo ../../../../src/gmxlib/gmx_lapack/slasd6.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgeqr2.c -fPIC -DPIC -o .libs/sgeqr2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssterf.c -fPIC -DPIC -o .libs/ssterf.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaed6.c -fPIC -DPIC -o .libs/slaed6.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq3.lo ../../../../src/gmxlib/gmx_lapack/slasq3.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarfb.c -fPIC -DPIC -o .libs/slarfb.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slatrd.lo ../../../../src/gmxlib/gmx_lapack/slatrd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaruv.c -fPIC -DPIC -o .libs/slaruv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd6.c -fPIC -DPIC -o .libs/slasd6.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorml2.lo ../../../../src/gmxlib/gmx_lapack/sorml2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstevr.lo ../../../../src/gmxlib/gmx_lapack/sstevr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq3.c -fPIC -DPIC -o .libs/slasq3.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slatrd.c -fPIC -DPIC -o .libs/slatrd.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgeqrf.lo ../../../../src/gmxlib/gmx_lapack/sgeqrf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slagtf.lo ../../../../src/gmxlib/gmx_lapack/slagtf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarfg.lo ../../../../src/gmxlib/gmx_lapack/slarfg.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorml2.c -fPIC -DPIC -o .libs/sorml2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slas2.lo ../../../../src/gmxlib/gmx_lapack/slas2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstevr.c -fPIC -DPIC -o .libs/sstevr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slagtf.c -fPIC -DPIC -o .libs/slagtf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd7.lo ../../../../src/gmxlib/gmx_lapack/slasd7.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq4.lo ../../../../src/gmxlib/gmx_lapack/slasq4.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgeqrf.c -fPIC -DPIC -o .libs/sgeqrf.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarfg.c -fPIC -DPIC -o .libs/slarfg.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorg2r.lo ../../../../src/gmxlib/gmx_lapack/sorg2r.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slas2.c -fPIC -DPIC -o .libs/slas2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormlq.lo ../../../../src/gmxlib/gmx_lapack/sormlq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssytd2.lo ../../../../src/gmxlib/gmx_lapack/ssytd2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq4.c -fPIC -DPIC -o .libs/slasq4.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgesdd.lo ../../../../src/gmxlib/gmx_lapack/sgesdd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd7.c -fPIC -DPIC -o .libs/slasd7.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slagts.lo ../../../../src/gmxlib/gmx_lapack/slagts.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorg2r.c -fPIC -DPIC -o .libs/sorg2r.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormlq.c -fPIC -DPIC -o .libs/sormlq.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarft.lo ../../../../src/gmxlib/gmx_lapack/slarft.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssytd2.c -fPIC -DPIC -o .libs/ssytd2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slascl.lo ../../../../src/gmxlib/gmx_lapack/slascl.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgesdd.c -fPIC -DPIC -o .libs/sgesdd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slagts.c -fPIC -DPIC -o .libs/slagts.o ../../../../src/gmxlib/gmx_lapack/sgesdd.c: In function 'sgesdd_': ../../../../src/gmxlib/gmx_lapack/sgesdd.c:40:9: warning: variable 'wntqas' set but not used [-Wunused-but-set-variable] int wntqas, lquery; ^ ../../../../src/gmxlib/gmx_lapack/sgesdd.c:38:9: warning: variable 'minwrk' set but not used [-Wunused-but-set-variable] int minwrk, ldwrku, maxwrk, ldwkvt; ^ ../../../../src/gmxlib/gmx_lapack/sgesdd.c:35:16: warning: variable 'wntqo' set but not used [-Wunused-but-set-variable] int wntqn, wntqo, wntqs; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd8.lo ../../../../src/gmxlib/gmx_lapack/slasd8.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq5.lo ../../../../src/gmxlib/gmx_lapack/slasq5.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarft.c -fPIC -DPIC -o .libs/slarft.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slascl.c -fPIC -DPIC -o .libs/slascl.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgbr.lo ../../../../src/gmxlib/gmx_lapack/sorgbr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormql.lo ../../../../src/gmxlib/gmx_lapack/sormql.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaev2.lo ../../../../src/gmxlib/gmx_lapack/slaev2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd8.c -fPIC -DPIC -o .libs/slasd8.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssteqr.lo ../../../../src/gmxlib/gmx_lapack/ssteqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq5.c -fPIC -DPIC -o .libs/slasq5.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgbr.c -fPIC -DPIC -o .libs/sorgbr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormql.c -fPIC -DPIC -o .libs/sormql.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyevr.lo ../../../../src/gmxlib/gmx_lapack/ssyevr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasrt2.lo ../../../../src/gmxlib/gmx_lapack/slasrt2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaev2.c -fPIC -DPIC -o .libs/slaev2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slansy.lo ../../../../src/gmxlib/gmx_lapack/slansy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slar1vx.lo ../../../../src/gmxlib/gmx_lapack/slar1vx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssteqr.c -fPIC -DPIC -o .libs/ssteqr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrbx.lo ../../../../src/gmxlib/gmx_lapack/slarrbx.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrex.lo ../../../../src/gmxlib/gmx_lapack/slarrex.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrfx.lo ../../../../src/gmxlib/gmx_lapack/slarrfx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssyevr.c -fPIC -DPIC -o .libs/ssyevr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slansy.c -fPIC -DPIC -o .libs/slansy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasrt2.c -fPIC -DPIC -o .libs/slasrt2.o ../../../../src/gmxlib/gmx_lapack/ssyevr.c: In function 'ssyevr_': ../../../../src/gmxlib/gmx_lapack/ssyevr.c:36:11: warning: variable 'abstll' set but not used [-Wunused-but-set-variable] float abstll, bignum; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:33:17: warning: variable 'ieeeok' set but not used [-Wunused-but-set-variable] int iscale, ieeeok, indibl, indifl; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:21:21: warning: variable 'vuu' set but not used [-Wunused-but-set-variable] float eps, vll, vuu, tmp1; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:21:16: warning: variable 'vll' set but not used [-Wunused-but-set-variable] float eps, vll, vuu, tmp1; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slar1vx.c -fPIC -DPIC -o .libs/slar1vx.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrvx.lo ../../../../src/gmxlib/gmx_lapack/slarrvx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrex.c -fPIC -DPIC -o .libs/slarrex.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrbx.c -fPIC -DPIC -o .libs/slarrbx.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrfx.c -fPIC -DPIC -o .libs/slarrfx.o ../../../../src/gmxlib/gmx_lapack/slarrbx.c: In function 'slarrbx_': ../../../../src/gmxlib/gmx_lapack/slarrbx.c:36:32: warning: variable 'error' set but not used [-Wunused-but-set-variable] float right, width, dplus, error; ^ ../../../../src/gmxlib/gmx_lapack/slarrbx.c:34:11: warning: variable 'eps' set but not used [-Wunused-but-set-variable] float eps, tmp, left; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrvx.c -fPIC -DPIC -o .libs/slarrvx.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ilasrt2.lo ../../../../src/gmxlib/gmx_lapack/ilasrt2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ilasrt2.c -fPIC -DPIC -o .libs/ilasrt2.o /bin/sh ../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o liblapack.la dbdsdc.lo dgetf2.lo dlamrg.lo dlarnv.lo dlasd0.lo dlasda.lo dlasq6.lo dorgl2.lo dormqr.lo dbdsqr.lo dgetrf.lo dlange.lo dlasd1.lo dtrtri.lo dlasdq.lo dlasr.lo dorglq.lo dormtr.lo dgebd2.lo dlabrd.lo dlanst.lo dlasd2.lo dlasdt.lo dlasrt.lo dorgqr.lo dstebz.lo dgebrd.lo dsytrd.lo dlacpy.lo dlapy2.lo dlasd3.lo dlaset.lo dlassq.lo dorm2l.lo dgetrs.lo dstegr.lo dgelq2.lo dlae2.lo dlasd4.lo dlasq1.lo dtrti2.lo dgetri.lo dlasv2.lo dorm2r.lo dstein.lo dgelqf.lo dlaebz.lo dlarf.lo dlartg.lo dlasd5.lo dlasq2.lo dlaswp.lo dormbr.lo dsterf.lo dgeqr2.lo dlaed6.lo dlarfb.lo dlaruv.lo dlasd6.lo dlasq3.lo dlatrd.lo dorml2.lo dstevr.lo dgeqrf.lo dlagtf.lo dlarfg.lo dlas2.lo dlasd7.lo dlasq4.lo dorg2r.lo dormlq.lo dsytd2.lo dgesdd.lo dlagts.lo dlarft.lo dlascl.lo dlasd8.lo dlasq5.lo dorgbr.lo dormql.lo dlaev2.lo dsteqr.lo dsyevr.lo dlasrt2.lo dlansy.lo dlar1vx.lo dlarrbx.lo dlarrex.lo dlarrfx.lo dlarrvx.lo sbdsdc.lo sgetf2.lo slamrg.lo slarnv.lo slasd0.lo slasda.lo slasq6.lo sorgl2.lo sormqr.lo sbdsqr.lo sgetrf.lo slange.lo slasd1.lo ssytrd.lo slasdq.lo slasr.lo sorglq.lo sormtr.lo sgebd2.lo slabrd.lo slanst.lo slasd2.lo slasdt.lo slasrt.lo sorgqr.lo sstebz.lo sgebrd.lo sgetrs.lo slacpy.lo slapy2.lo slasd3.lo slaset.lo slassq.lo sorm2l.lo sgetri.lo sstegr.lo sgelq2.lo slae2.lo slasd4.lo slasq1.lo strti2.lo strtri.lo slasv2.lo sorm2r.lo sstein.lo sgelqf.lo slaebz.lo slarf.lo slartg.lo slasd5.lo slasq2.lo slaswp.lo sormbr.lo ssterf.lo sgeqr2.lo slaed6.lo slarfb.lo slaruv.lo slasd6.lo slasq3.lo slatrd.lo sorml2.lo sstevr.lo sgeqrf.lo slagtf.lo slarfg.lo slas2.lo slasd7.lo slasq4.lo sorg2r.lo sormlq.lo ssytd2.lo sgesdd.lo slagts.lo slarft.lo slascl.lo slasd8.lo slasq5.lo sorgbr.lo sormql.lo slaev2.lo ssteqr.lo ssyevr.lo slasrt2.lo slansy.lo slar1vx.lo slarrbx.lo slarrex.lo slarrfx.lo slarrvx.lo ilasrt2.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/liblapack.a .libs/dbdsdc.o .libs/dgetf2.o .libs/dlamrg.o .libs/dlarnv.o .libs/dlasd0.o .libs/dlasda.o .libs/dlasq6.o .libs/dorgl2.o .libs/dormqr.o .libs/dbdsqr.o .libs/dgetrf.o .libs/dlange.o .libs/dlasd1.o .libs/dtrtri.o .libs/dlasdq.o .libs/dlasr.o .libs/dorglq.o .libs/dormtr.o .libs/dgebd2.o .libs/dlabrd.o .libs/dlanst.o .libs/dlasd2.o .libs/dlasdt.o .libs/dlasrt.o .libs/dorgqr.o .libs/dstebz.o .libs/dgebrd.o .libs/dsytrd.o .libs/dlacpy.o .libs/dlapy2.o .libs/dlasd3.o .libs/dlaset.o .libs/dlassq.o .libs/dorm2l.o .libs/dgetrs.o .libs/dstegr.o .libs/dgelq2.o .libs/dlae2.o .libs/dlasd4.o .libs/dlasq1.o .libs/dtrti2.o .libs/dgetri.o .libs/dlasv2.o .libs/dorm2r.o .libs/dstein.o .libs/dgelqf.o .libs/dlaebz.o .libs/dlarf.o .libs/dlartg.o .libs/dlasd5.o .libs/dlasq2.o .libs/dlaswp.o .libs/dormbr.o .libs/dsterf.o .libs/dgeqr2.o .libs/dlaed6.o .libs/dlarfb.o .libs/dlaruv.o .libs/dlasd6.o .libs/dlasq3.o .libs/dlatrd.o .libs/dorml2.o .libs/dstevr.o .libs/dgeqrf.o .libs/dlagtf.o .libs/dlarfg.o .libs/dlas2.o .libs/dlasd7.o .libs/dlasq4.o .libs/dorg2r.o .libs/dormlq.o .libs/dsytd2.o .libs/dgesdd.o .libs/dlagts.o .libs/dlarft.o .libs/dlascl.o .libs/dlasd8.o .libs/dlasq5.o .libs/dorgbr.o .libs/dormql.o .libs/dlaev2.o .libs/dsteqr.o .libs/dsyevr.o .libs/dlasrt2.o .libs/dlansy.o .libs/dlar1vx.o .libs/dlarrbx.o .libs/dlarrex.o .libs/dlarrfx.o .libs/dlarrvx.o .libs/sbdsdc.o .libs/sgetf2.o .libs/slamrg.o .libs/slarnv.o .libs/slasd0.o .libs/slasda.o .libs/slasq6.o .libs/sorgl2.o .libs/sormqr.o .libs/sbdsqr.o .libs/sgetrf.o .libs/slange.o .libs/slasd1.o .libs/ssytrd.o .libs/slasdq.o .libs/slasr.o .libs/sorglq.o .libs/sormtr.o .libs/sgebd2.o .libs/slabrd.o .libs/slanst.o .libs/slasd2.o .libs/slasdt.o .libs/slasrt.o .libs/sorgqr.o .libs/sstebz.o .libs/sgebrd.o .libs/sgetrs.o .libs/slacpy.o .libs/slapy2.o .libs/slasd3.o .libs/slaset.o .libs/slassq.o .libs/sorm2l.o .libs/sgetri.o .libs/sstegr.o .libs/sgelq2.o .libs/slae2.o .libs/slasd4.o .libs/slasq1.o .libs/strti2.o .libs/strtri.o .libs/slasv2.o .libs/sorm2r.o .libs/sstein.o .libs/sgelqf.o .libs/slaebz.o .libs/slarf.o .libs/slartg.o .libs/slasd5.o .libs/slasq2.o .libs/slaswp.o .libs/sormbr.o .libs/ssterf.o .libs/sgeqr2.o .libs/slaed6.o .libs/slarfb.o .libs/slaruv.o .libs/slasd6.o .libs/slasq3.o .libs/slatrd.o .libs/sorml2.o .libs/sstevr.o .libs/sgeqrf.o .libs/slagtf.o .libs/slarfg.o .libs/slas2.o .libs/slasd7.o .libs/slasq4.o .libs/sorg2r.o .libs/sormlq.o .libs/ssytd2.o .libs/sgesdd.o .libs/slagts.o .libs/slarft.o .libs/slascl.o .libs/slasd8.o .libs/slasq5.o .libs/sorgbr.o .libs/sormql.o .libs/slaev2.o .libs/ssteqr.o .libs/ssyevr.o .libs/slasrt2.o .libs/slansy.o .libs/slar1vx.o .libs/slarrbx.o .libs/slarrex.o .libs/slarrfx.o .libs/slarrvx.o .libs/ilasrt2.o ranlib .libs/liblapack.a creating liblapack.la (cd .libs && rm -f liblapack.la && ln -s ../liblapack.la liblapack.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_lapack' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o 3dview.lo ../../../src/gmxlib/3dview.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o atomprop.lo ../../../src/gmxlib/atomprop.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o bondfree.lo ../../../src/gmxlib/bondfree.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcgrid.lo ../../../src/gmxlib/calcgrid.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calch.lo ../../../src/gmxlib/calch.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o checkpoint.lo ../../../src/gmxlib/checkpoint.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o confio.lo ../../../src/gmxlib/confio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o copyrite.lo ../../../src/gmxlib/copyrite.c mkdir .libs mkdir .libs mkdir: cannot create directory '.libs': File exists mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/bondfree.c -fPIC -DPIC -o .libs/bondfree.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/confio.c -fPIC -DPIC -o .libs/confio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/atomprop.c -fPIC -DPIC -o .libs/atomprop.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/calcgrid.c -fPIC -DPIC -o .libs/calcgrid.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/calch.c -fPIC -DPIC -o .libs/calch.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/3dview.c -fPIC -DPIC -o .libs/3dview.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/copyrite.c -fPIC -DPIC -o .libs/copyrite.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/checkpoint.c -fPIC -DPIC -o .libs/checkpoint.o ../../../src/gmxlib/calch.c: In function 'gen_waterhydrogen': ../../../src/gmxlib/calch.c:81:14: warning: unused variable 'kkk' [-Wunused-variable] rvec kkk; ^ In file included from ../../../src/gmxlib/calch.c:42:0: ../../../src/gmxlib/calch.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/calch.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/3dview.c: In function 'reset_view': ../../../src/gmxlib/3dview.c:282:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/3dview.c:47: ../../../src/gmxlib/3dview.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/3dview.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/confio.c: In function 'read_espresso_conf': ../../../src/gmxlib/confio.c:448:21: warning: unused variable 'npar' [-Wunused-variable] int natoms,level,npar,r,nprop,p,i,m; ^ ../../../src/gmxlib/confio.c:448:8: warning: unused variable 'natoms' [-Wunused-variable] int natoms,level,npar,r,nprop,p,i,m; ^ ../../../src/gmxlib/confio.c: In function 'read_stx_conf': ../../../src/gmxlib/confio.c:1298:14: warning: unused variable 'd' [-Wunused-variable] real d,r1,r2; ^ ../../../src/gmxlib/confio.c:1293:14: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/confio.c:49: ../../../src/gmxlib/confio.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/confio.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/confio.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/gmxlib/confio.c:57:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/confio.c:59: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/confio.c:864:13: warning: 'get_conf' defined but not used [-Wunused-function] static void get_conf(FILE *in, char *title, int *natoms, ^ ../../../src/gmxlib/bondfree.c: In function 'FENE_bonds': ../../../src/gmxlib/bondfree.c:220:9: warning: unused variable 'dr' [-Wunused-variable] real dr,dr2,bm2,omdr2obm2,fbond,vbond,fij,vtot; ^ ../../../src/gmxlib/bondfree.c: In function 'do_1_thole': ../../../src/gmxlib/bondfree.c:534:20: warning: unused variable 'r12n' [-Wunused-variable] real r12sq,r12_1,r12n,r12bar,v0,v1,fscal,ebar,fff; ^ ../../../src/gmxlib/bondfree.c: In function 'posres': ../../../src/gmxlib/bondfree.c:1136:19: warning: unused variable 'fc' [-Wunused-variable] real v,vtot,fm,*fc; ^ ../../../src/gmxlib/bondfree.c:1134:22: warning: unused variable 'ki' [-Wunused-variable] int i,ai,m,d,type,ki,npbcdim=0; ^ ../../../src/gmxlib/bondfree.c: In function 'cross_bond_angle': ../../../src/gmxlib/bondfree.c:1687:32: warning: variable 't3' set but not used [-Wunused-but-set-variable] int i,ai,aj,ak,type,m,t1,t2,t3; ^ ../../../src/gmxlib/bondfree.c: In function 'bonded_tab': ../../../src/gmxlib/bondfree.c:1762:10: warning: unused variable 'f' [-Wunused-variable] real v,f,dvdl; ^ ../../../src/gmxlib/bondfree.c:1762:8: warning: unused variable 'v' [-Wunused-variable] real v,f,dvdl; ^ ../../../src/gmxlib/bondfree.c: In function 'tab_angles': ../../../src/gmxlib/bondfree.c:1887:12: warning: unused variable 'snt' [-Wunused-variable] real snt,st,sth; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/bondfree.c:42: ../../../src/gmxlib/bondfree.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/bondfree.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/bondfree.c:56:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/gmxlib/calcgrid.c: In function 'calc_grid': ../../../src/gmxlib/calcgrid.c:89:8: warning: unused variable 'tmp' [-Wunused-variable] real tmp[3]; ^ ../../../src/gmxlib/calcgrid.c:86:10: warning: unused variable 'j' [-Wunused-variable] int i,j,nmin[DIM]; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o disre.lo ../../../src/gmxlib/disre.c In file included from ../../../src/gmxlib/atomprop.c:45:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/atomprop.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/copyrite.c: In function 'cool_quote': ../../../src/gmxlib/copyrite.c:181:9: warning: unused variable 's' [-Wunused-variable] char *s,*ptr; ^ ../../../src/gmxlib/copyrite.c: In function 'please_cite': ../../../src/gmxlib/copyrite.c:469:8: warning: unused variable 'j' [-Wunused-variable] int j,index; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/copyrite.c:53: ../../../src/gmxlib/copyrite.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_fit.lo ../../../src/gmxlib/do_fit.c ../../../src/gmxlib/checkpoint.c: In function 'do_cpte_ints': ../../../src/gmxlib/checkpoint.c:305:16: warning: unused variable 'i' [-Wunused-variable] int nf,dt,i; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpte_doubles': ../../../src/gmxlib/checkpoint.c:371:16: warning: unused variable 'i' [-Wunused-variable] int nf,dt,i; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpt_header': ../../../src/gmxlib/checkpoint.c:534:10: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/checkpoint.c: In function 'write_checkpoint': ../../../src/gmxlib/checkpoint.c:837:30: warning: unused variable 'i' [-Wunused-variable] int flags_eks,flags_enh,i; ^ ../../../src/gmxlib/checkpoint.c:833:29: warning: unused variable 'flag_64bit' [-Wunused-variable] int nppnodes,npmenodes,flag_64bit; ^ ../../../src/gmxlib/checkpoint.c: In function 'read_checkpoint': ../../../src/gmxlib/checkpoint.c:1254:40: warning: left-hand operand of comma expression has no effect [-Wunused-value] if (outputfiles[i].filename,outputfiles[i].offset < 0) ^ ../../../src/gmxlib/checkpoint.c:1036:7: warning: unused variable 'filename' [-Wunused-variable] char filename[STRLEN]; ^ ../../../src/gmxlib/checkpoint.c:1033:15: warning: unused variable 'j' [-Wunused-variable] int fp,i,j; ^ ../../../src/gmxlib/checkpoint.c: In function 'list_checkpoint': ../../../src/gmxlib/checkpoint.c:1421:12: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/checkpoint.c:1421:10: warning: unused variable 'i' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/checkpoint.c:1420:10: warning: unused variable 'indent' [-Wunused-variable] int indent; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/checkpoint.c:32: ../../../src/gmxlib/checkpoint.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/checkpoint.c:34: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/checkpoint.c:34:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o enxio.lo ../../../src/gmxlib/enxio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/disre.c -fPIC -DPIC -o .libs/disre.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ewald_util.lo ../../../src/gmxlib/ewald_util.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/do_fit.c -fPIC -DPIC -o .libs/do_fit.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/enxio.c -fPIC -DPIC -o .libs/enxio.o ../../../src/gmxlib/disre.c: In function 'init_disres': /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fatal.lo ../../../src/gmxlib/gmx_fatal.c ../../../src/gmxlib/disre.c:62:19: warning: variable 'ip' set but not used [-Wunused-but-set-variable] t_iparams *ip; ^ ../../../src/gmxlib/disre.c:61:26: warning: unused variable 'i' [-Wunused-variable] int fa,nmol,i,npair,np; ^ ../../../src/gmxlib/disre.c: In function 'calc_disres_R_6': ../../../src/gmxlib/disre.c:217:23: warning: unused variable 'dt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:217:20: warning: unused variable 'jt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:217:17: warning: unused variable 'it' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:212:37: warning: unused variable 'm' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:34: warning: unused variable 'kj' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:31: warning: unused variable 'ki' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:24: warning: unused variable 'i' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c: In function 'ta_disres': ../../../src/gmxlib/disre.c:338:20: warning: unused variable 'jt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:338:17: warning: unused variable 'it' [-Wunused-variable] ivec it,jt,dt; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/disre.c:47: ../../../src/gmxlib/disre.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/disre.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/disre.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ewald_util.c -fPIC -DPIC -o .libs/ewald_util.o ../../../src/gmxlib/do_fit.c: In function 'calc_fit_R': ../../../src/gmxlib/do_fit.c:103:18: warning: unused variable 'm' [-Wunused-variable] int c,r,n,j,m,i,irot,s; ^ ../../../src/gmxlib/do_fit.c: In function 'do_fit_ndim': ../../../src/gmxlib/do_fit.c:214:10: warning: unused variable 'i' [-Wunused-variable] int i,j,m,r,c; ^ In file included from ../../../src/gmxlib/do_fit.c:40:0: ../../../src/gmxlib/do_fit.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/do_fit.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/ewald_util.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/ewald_util.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_fatal.c -fPIC -DPIC -o .libs/gmx_fatal.o ../../../src/gmxlib/enxio.c: In function 'empty_file': ../../../src/gmxlib/enxio.c:220:8: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret; ^ ../../../src/gmxlib/enxio.c: In function 'get_enx_state': ../../../src/gmxlib/enxio.c:443:16: warning: unused variable 'pcouplmu_nm' [-Wunused-variable] static char *pcouplmu_nm[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/enxio.c:46: ../../../src/gmxlib/enxio.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/enxio.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ffscanf.lo ../../../src/gmxlib/ffscanf.c In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/gmx_fatal.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/gmx_fatal.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/gmx_fatal.c:115:13: warning: 'bputi' defined but not used [-Wunused-function] static void bputi(char *msg,int *len,int val,int radix,int fld,bool bNeg) ^ ../../../src/gmxlib/gmx_fatal.c:226:13: warning: 'fatal_error' defined but not used [-Wunused-function] static void fatal_error(int f_errno,const char *fmt,...) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o filenm.lo ../../../src/gmxlib/filenm.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o futil.lo ../../../src/gmxlib/futil.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ffscanf.c -fPIC -DPIC -o .libs/ffscanf.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gbutil.lo ../../../src/gmxlib/gbutil.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/futil.c -fPIC -DPIC -o .libs/futil.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/filenm.c -fPIC -DPIC -o .libs/filenm.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxfio.lo ../../../src/gmxlib/gmxfio.c ../../../src/gmxlib/futil.c: In function 'ffopen': ../../../src/gmxlib/futil.c:287:18: warning: unused variable 'bf' [-Wunused-variable] char buf[256],*bf,*bufsize=0,*ptr; ^ ../../../src/gmxlib/futil.c: In function 'get_libdir': ../../../src/gmxlib/futil.c:397:22: warning: variable 'pdum' set but not used [-Wunused-but-set-variable] char *dir,*ptr,*s,*pdum; ^ ../../../src/gmxlib/futil.c:395:8: warning: unused variable 'test_file' [-Wunused-variable] char test_file[MAX_PATHBUF]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/futil.c:53: ../../../src/gmxlib/futil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gbutil.c -fPIC -DPIC -o .libs/gbutil.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ifunc.lo ../../../src/gmxlib/ifunc.c ../../../src/gmxlib/filenm.c: In function 'add_suffix_to_output_names': ../../../src/gmxlib/filenm.c:811:12: warning: unused variable 'pos' [-Wunused-variable] int i,j,pos; ^ In file included from ../../../include/wman.h:44:0, from ../../../src/gmxlib/filenm.c:48: ../../../src/gmxlib/filenm.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o index.lo ../../../src/gmxlib/index.c In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/gbutil.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/gbutil.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/gbutil.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o cinvsqrtdata.lo ../../../src/gmxlib/cinvsqrtdata.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmxfio.c -fPIC -DPIC -o .libs/gmxfio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ifunc.c -fPIC -DPIC -o .libs/ifunc.o ../../../src/gmxlib/gmxfio.c: In function 'gmx_fio_fopen': ../../../src/gmxlib/gmxfio.c:803:8: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/gmxlib/gmxfio.c: In function 'gmx_fio_get_output_file_positions': ../../../src/gmxlib/gmxfio.c:885:27: warning: unused variable 'pos' [-Wunused-variable] long pos; ^ ../../../src/gmxlib/gmxfio.c:884:34: warning: unused variable 'pos_lo' [-Wunused-variable] int pos_hi,pos_lo; ^ ../../../src/gmxlib/gmxfio.c:884:27: warning: unused variable 'pos_hi' [-Wunused-variable] int pos_hi,pos_lo; ^ ../../../src/gmxlib/gmxfio.c:883:36: warning: unused variable 'rc' [-Wunused-variable] int i,nfiles,rc,nalloc; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/index.c -fPIC -DPIC -o .libs/index.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o invblock.lo ../../../src/gmxlib/invblock.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o macros.lo ../../../src/gmxlib/macros.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o orires.lo ../../../src/gmxlib/orires.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/cinvsqrtdata.c -fPIC -DPIC -o .libs/cinvsqrtdata.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sparsematrix.lo ../../../src/gmxlib/sparsematrix.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o main.lo ../../../src/gmxlib/main.c ../../../src/gmxlib/index.c: In function 'analyse_prot': ../../../src/gmxlib/index.c:298:15: warning: unused variable 'nnpres' [-Wunused-variable] int nra,nnpres,npres; ^ ../../../src/gmxlib/index.c: In function 'init_index': ../../../src/gmxlib/index.c:532:19: warning: variable 'nread' set but not used [-Wunused-but-set-variable] int i,j,ng,nread; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/index.c:48: ../../../src/gmxlib/index.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/index.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/invblock.c -fPIC -DPIC -o .libs/invblock.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/sparsematrix.c -fPIC -DPIC -o .libs/sparsematrix.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/orires.c -fPIC -DPIC -o .libs/orires.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o maths.lo ../../../src/gmxlib/maths.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/macros.c -fPIC -DPIC -o .libs/macros.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o matio.lo ../../../src/gmxlib/matio.c ../../../src/gmxlib/orires.c: In function 'init_orires': ../../../src/gmxlib/orires.c:59:26: warning: unused variable 'nr' [-Wunused-variable] int i,j,d,ex,nmol,nr,*nr_ex; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/orires.c:43: ../../../src/gmxlib/orires.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/orires.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/orires.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/main.c -fPIC -DPIC -o .libs/main.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mshift.lo ../../../src/gmxlib/mshift.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/maths.c -fPIC -DPIC -o .libs/maths.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mtop_util.lo ../../../src/gmxlib/mtop_util.c ../../../src/gmxlib/main.c: In function 'par_fn': ../../../src/gmxlib/main.c:68:7: warning: unused variable 'n' [-Wunused-variable] int n; ^ ../../../src/gmxlib/main.c: In function 'gmx_log_open': ../../../src/gmxlib/main.c:124:12: warning: unused variable 'testlen' [-Wunused-variable] int len,testlen,pid; ^ ../../../src/gmxlib/main.c: In function 'init_par': ../../../src/gmxlib/main.c:309:13: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/gmxlib/main.c:52: ../../../src/gmxlib/main.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/gmxlib/main.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/gmxlib/main.c:52: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/maths.c:43:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/matio.c -fPIC -DPIC -o .libs/matio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mshift.c -fPIC -DPIC -o .libs/mshift.o ../../../src/gmxlib/mshift.c: In function 'compact_graph': ../../../src/gmxlib/mshift.c:243:12: warning: unused variable 'e' [-Wunused-variable] atom_id *e; ^ ../../../src/gmxlib/mshift.c:242:9: warning: unused variable 'j' [-Wunused-variable] int i,j,n,max_nedge; ^ ../../../src/gmxlib/mshift.c: In function 'mk_graph_ilist': ../../../src/gmxlib/mshift.c:307:13: warning: variable 'nbtot' set but not used [-Wunused-but-set-variable] int i,nbtot; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/mshift.c:44: ../../../src/gmxlib/mshift.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/mshift.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/mshift.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mtxio.lo ../../../src/gmxlib/mtxio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mtop_util.c -fPIC -DPIC -o .libs/mtop_util.o ../../../src/gmxlib/matio.c: In function 'write_xpm_map_split': ../../../src/gmxlib/matio.c:636:16: warning: unused variable 'fac' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:14: warning: unused variable 'b' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:12: warning: unused variable 'g' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:10: warning: unused variable 'r' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:635:10: warning: unused variable 'i' [-Wunused-variable] int i,ntot; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/matio.c:48: ../../../src/gmxlib/matio.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/matio.c:50:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mvdata.lo ../../../src/gmxlib/mvdata.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o names.lo ../../../src/gmxlib/names.c ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_atomnr_to_molblock_ind': ../../../src/gmxlib/mtop_util.c:105:14: warning: unused variable 'atoms' [-Wunused-variable] t_atoms *atoms; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_atominfo_global': ../../../src/gmxlib/mtop_util.c:132:21: warning: unused variable 'molb' [-Wunused-variable] gmx_molblock_t *molb; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_ilistloop_all_next': ../../../src/gmxlib/mtop_util.c:384:21: warning: unused variable 'molb' [-Wunused-variable] gmx_molblock_t *molb; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_global_cgs': ../../../src/gmxlib/mtop_util.c:438:14: warning: unused variable 'atoms' [-Wunused-variable] t_atoms *atoms; ^ ../../../src/gmxlib/mtop_util.c: In function 'gen_local_top': ../../../src/gmxlib/mtop_util.c:669:31: warning: unused variable 'mt' [-Wunused-variable] int mb,srcnr,destnr,ftype,mt,natoms,nposre_old; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mtxio.c -fPIC -DPIC -o .libs/mtxio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mvdata.c -fPIC -DPIC -o .libs/mvdata.o ../../../src/gmxlib/mvdata.c: In function 'bc_atoms': ../../../src/gmxlib/mvdata.c:147:7: warning: unused variable 'dummy' [-Wunused-variable] int dummy; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_groups': ../../../src/gmxlib/mvdata.c:162:7: warning: unused variable 'dummy' [-Wunused-variable] int dummy; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_ffparams': ../../../src/gmxlib/mvdata.c:290:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_molblock': ../../../src/gmxlib/mvdata.c:427:8: warning: unused variable 'bAlloc' [-Wunused-variable] bool bAlloc=TRUE; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/mvdata.c:50: ../../../src/gmxlib/mvdata.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/mvdata.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/mvdata.c:275:13: warning: 'bc_idef' defined but not used [-Wunused-function] static void bc_idef(const t_commrec *cr,t_idef *idef) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/names.c -fPIC -DPIC -o .libs/names.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o network.lo ../../../src/gmxlib/network.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrama.lo ../../../src/gmxlib/nrama.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/network.c -fPIC -DPIC -o .libs/network.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrjac.lo ../../../src/gmxlib/nrjac.c ../../../src/gmxlib/mtxio.c: In function 'gmx_mtxio_write': ../../../src/gmxlib/mtxio.c:90:13: warning: variable 'xd' set but not used [-Wunused-but-set-variable] XDR * xd; ^ ../../../src/gmxlib/mtxio.c: In function 'gmx_mtxio_read': ../../../src/gmxlib/mtxio.c:164:13: warning: variable 'xd' set but not used [-Wunused-but-set-variable] XDR * xd; ^ In file included from ../../../src/gmxlib/mtxio.c:48:0: ../../../src/gmxlib/mtxio.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrama.c -fPIC -DPIC -o .libs/nrama.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrjac.c -fPIC -DPIC -o .libs/nrjac.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/nrjac.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrnb.lo ../../../src/gmxlib/nrnb.c ../../../src/gmxlib/network.c: In function 'gmx_setup': ../../../src/gmxlib/network.c:75:12: warning: unused variable 'flag' [-Wunused-variable] int i,flag; ^ ../../../src/gmxlib/network.c:75:10: warning: unused variable 'i' [-Wunused-variable] int i,flag; ^ ../../../src/gmxlib/network.c:73:10: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ In file included from ../../../src/gmxlib/network.c:45:0: ../../../src/gmxlib/network.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/network.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pargs.lo ../../../src/gmxlib/pargs.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrnb.c -fPIC -DPIC -o .libs/nrnb.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pbc.lo ../../../src/gmxlib/pbc.c ../../../src/gmxlib/nrama.c: In function 'get_dih2': ../../../src/gmxlib/nrama.c:179:11: warning: unused variable 'found' [-Wunused-variable] int found,**ff,thisff[NPP]; ^ ../../../src/gmxlib/nrama.c: In function 'init_rama': ../../../src/gmxlib/nrama.c:307:10: warning: unused variable 'ePBC' [-Wunused-variable] int ePBC; ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/nrama.h:45, from ../../../src/gmxlib/nrama.c:49: ../../../src/gmxlib/nrama.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/nrama.c:176:13: warning: 'get_dih2' defined but not used [-Wunused-function] static void get_dih2(t_xrama *xr,t_functype functype[], ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdbio.lo ../../../src/gmxlib/pdbio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pargs.c -fPIC -DPIC -o .libs/pargs.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o princ.lo ../../../src/gmxlib/princ.c In file included from ../../../src/gmxlib/nrnb.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pbc.c -fPIC -DPIC -o .libs/pbc.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rando.lo ../../../src/gmxlib/rando.c ../../../src/gmxlib/pargs.c: In function 'print_pargs': ../../../src/gmxlib/pargs.c:306:26: warning: unused variable 'tmp' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ ../../../src/gmxlib/pargs.c:306:16: warning: unused variable 'buf2' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ ../../../src/gmxlib/pargs.c:306:8: warning: unused variable 'buf' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pargs.c:51: ../../../src/gmxlib/pargs.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pargs.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o random.lo ../../../src/gmxlib/random.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_random.lo ../../../src/gmxlib/gmx_random.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pdbio.c -fPIC -DPIC -o .libs/pdbio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/princ.c -fPIC -DPIC -o .libs/princ.o ../../../src/gmxlib/pbc.c: In function 'low_set_pbc': ../../../src/gmxlib/pbc.c:272:8: warning: unused variable 'bXY' [-Wunused-variable] bool bXY,bUse; ^ ../../../src/gmxlib/pbc.c: In function 'put_atom_in_box': ../../../src/gmxlib/pbc.c:1300:7: warning: unused variable 'i' [-Wunused-variable] int i,m,d; ^ ../../../src/gmxlib/pbc.c: In function 'put_atoms_in_box': ../../../src/gmxlib/pbc.c:1314:11: warning: unused variable 'd' [-Wunused-variable] int i,m,d; ^ ../../../src/gmxlib/pbc.c:1314:9: warning: unused variable 'm' [-Wunused-variable] int i,m,d; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pbc.c:43: ../../../src/gmxlib/pbc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pbc.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rando.c -fPIC -DPIC -o .libs/rando.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/princ.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/princ.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/princ.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/princ.c:48:13: warning: 'm_op' defined but not used [-Wunused-function] static void m_op(matrix mat,rvec x) ^ ../../../src/gmxlib/princ.c:249:13: warning: 'dump_shit' defined but not used [-Wunused-function] static void dump_shit(FILE *out,matrix trans,rvec prcomp,real totmass) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/random.c -fPIC -DPIC -o .libs/random.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pdbio.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pdbio.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/pdbio.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_random.c -fPIC -DPIC -o .libs/gmx_random.o ../../../src/gmxlib/random.c: In function 'maxwell_speed': ../../../src/gmxlib/random.c:94:11: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/random.c:93:12: warning: unused variable 'dummy' [-Wunused-variable] atom_id *dummy; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/random.c:45: ../../../src/gmxlib/random.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/random.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rbin.lo ../../../src/gmxlib/rbin.c ../../../src/gmxlib/gmx_random.c: In function 'gmx_rng_make_seed': ../../../src/gmxlib/gmx_random.c:146:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret; ^ ../../../src/gmxlib/gmx_random.c: In function 'gmx_rng_update': ../../../src/gmxlib/gmx_random.c:168:7: warning: variable 'mti' set but not used [-Wunused-but-set-variable] int mti,k; ^ ../../../src/gmxlib/gmx_random.c:167:16: warning: unused variable 'lastx' [-Wunused-variable] unsigned int lastx,x1,x2,y,*mt; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readinp.lo ../../../src/gmxlib/readinp.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o replace.lo ../../../src/gmxlib/replace.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rbin.c -fPIC -DPIC -o .libs/rbin.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rmpbc.lo ../../../src/gmxlib/rmpbc.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shift_util.lo ../../../src/gmxlib/shift_util.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sortwater.lo ../../../src/gmxlib/sortwater.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/replace.c -fPIC -DPIC -o .libs/replace.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/readinp.c -fPIC -DPIC -o .libs/readinp.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o smalloc.lo ../../../src/gmxlib/smalloc.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rmpbc.c -fPIC -DPIC -o .libs/rmpbc.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o statutil.lo ../../../src/gmxlib/statutil.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/shift_util.c -fPIC -DPIC -o .libs/shift_util.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/sortwater.c -fPIC -DPIC -o .libs/sortwater.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/smalloc.c -fPIC -DPIC -o .libs/smalloc.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/rmpbc.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/rmpbc.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/rmpbc.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/readinp.c:46:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strdb.lo ../../../src/gmxlib/strdb.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/statutil.c -fPIC -DPIC -o .libs/statutil.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o string2.lo ../../../src/gmxlib/string2.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o symtab.lo ../../../src/gmxlib/symtab.c ../../../src/gmxlib/shift_util.c: In function 'shift_LRcorrection': ../../../src/gmxlib/shift_util.c:257:10: warning: unused variable 'shift' [-Wunused-variable] ivec shift; ^ ../../../src/gmxlib/shift_util.c:253:42: warning: unused variable 'qtot' [-Wunused-variable] real qi,dr,dr2,dr_1,dr_3,fscal,Vexcl,qtot=0; ^ ../../../src/gmxlib/shift_util.c:252:10: warning: unused variable 'isp' [-Wunused-variable] double isp=0.564189583547756; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/shift_util.c:43: ../../../src/gmxlib/shift_util.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/shift_util.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/shift_util.c:370:13: warning: 'rgbset' defined but not used [-Wunused-function] static real rgbset(real col) ^ ../../../src/gmxlib/statutil.c: In function 'check_times2': ../../../src/gmxlib/statutil.c:152:8: warning: variable 'margin' set but not used [-Wunused-but-set-variable] real margin; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/strdb.c -fPIC -DPIC -o .libs/strdb.o ../../../src/gmxlib/statutil.c: In function 'parse_common_args': mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/string2.c -fPIC -DPIC -o .libs/string2.o ../../../src/gmxlib/statutil.c:528:14: warning: unused variable 'newdesc' [-Wunused-variable] char *ptr,*newdesc; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/sortwater.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/sortwater.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/statutil.c:528:9: warning: unused variable 'ptr' [-Wunused-variable] char *ptr,*newdesc; ^ ../../../src/gmxlib/statutil.c:491:11: warning: unused variable 'npri_pa' [-Wunused-variable] t_pargs npri_pa = { "-npri", FALSE, etINT, {&npri}, ^ ../../../src/gmxlib/statutil.c:485:27: warning: unused variable 'mantp' [-Wunused-variable] static int nicelevel=0,mantp=0,npri=0,debug_level=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/statutil.c:47: ../../../src/gmxlib/statutil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/statutil.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/statutil.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/statutil.c:73:14: warning: 'timelabel' defined but not used [-Wunused-variable] static char *timelabel = NULL; ^ ../../../src/gmxlib/statutil.c:361:13: warning: 'pdesc' defined but not used [-Wunused-function] static void pdesc(char *desc) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/symtab.c -fPIC -DPIC -o .libs/symtab.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topsort.lo ../../../src/gmxlib/topsort.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpxio.lo ../../../src/gmxlib/tpxio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trnio.lo ../../../src/gmxlib/trnio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trxio.lo ../../../src/gmxlib/trxio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o txtdump.lo ../../../src/gmxlib/txtdump.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o typedefs.lo ../../../src/gmxlib/typedefs.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/topsort.c -fPIC -DPIC -o .libs/topsort.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/tpxio.c -fPIC -DPIC -o .libs/tpxio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/trnio.c -fPIC -DPIC -o .libs/trnio.o ../../../src/gmxlib/topsort.c: In function 'gmx_sort_ilist_fe': ../../../src/gmxlib/topsort.c:142:10: warning: unused variable 'bPert' [-Wunused-variable] bool bPert; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/txtdump.c -fPIC -DPIC -o .libs/txtdump.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/trxio.c -fPIC -DPIC -o .libs/trxio.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o viewit.lo ../../../src/gmxlib/viewit.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/typedefs.c -fPIC -DPIC -o .libs/typedefs.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wgms.lo ../../../src/gmxlib/wgms.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wman.lo ../../../src/gmxlib/wman.c ../../../src/gmxlib/typedefs.c: In function 'init_block': ../../../src/gmxlib/typedefs.c:64:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_blocka': ../../../src/gmxlib/typedefs.c:74:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_atom': ../../../src/gmxlib/typedefs.c:87:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_top': ../../../src/gmxlib/typedefs.c:135:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'done_top': ../../../src/gmxlib/typedefs.c:284:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_state': ../../../src/gmxlib/typedefs.c:386:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/typedefs.c:43: ../../../src/gmxlib/typedefs.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/typedefs.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/tpxio.c: In function 'do_ilist': ../../../src/gmxlib/tpxio.c:987:10: warning: unused variable 'k' [-Wunused-variable] int i,k,idum; ^ ../../../src/gmxlib/tpxio.c: In function 'do_ffparams': ../../../src/gmxlib/tpxio.c:1008:15: warning: unused variable 'j' [-Wunused-variable] int idum,i,j,k; ^ ../../../src/gmxlib/tpxio.c: In function 'do_ilists': ../../../src/gmxlib/tpxio.c:1061:8: warning: unused variable 'bDum' [-Wunused-variable] bool bDum=TRUE,bClear; ^ ../../../src/gmxlib/tpxio.c:1060:13: warning: unused variable 'renum' [-Wunused-variable] int i,j,k,renum[F_NRE]; ^ ../../../src/gmxlib/tpxio.c:1060:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k,renum[F_NRE]; ^ ../../../src/gmxlib/tpxio.c: In function 'do_groups': ../../../src/gmxlib/tpxio.c:1276:10: warning: unused variable 'n' [-Wunused-variable] int g,n,i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_moltype': ../../../src/gmxlib/tpxio.c:1393:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_molblock': ../../../src/gmxlib/tpxio.c:1420:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_mtop': ../../../src/gmxlib/tpxio.c:1547:14: warning: unused variable 'i' [-Wunused-variable] int mt,mb,i; ^ ../../../src/gmxlib/tpxio.c: In function 'read_tpx_top': ../../../src/gmxlib/tpxio.c:2005:15: warning: unused variable 'ltop' [-Wunused-variable] t_topology *ltop; ^ ../../../src/gmxlib/tpxio.c: In function 'read_tps_conf': ../../../src/gmxlib/tpxio.c:2035:17: warning: unused variable 'topconv' [-Wunused-variable] t_topology *topconv; ^ In file included from ../../../src/gmxlib/tpxio.c:60:0: ../../../src/gmxlib/tpxio.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/tpxio.c:61: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/tpxio.c:61:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/txtdump.c: In function 'pr_qm_opts': ../../../src/gmxlib/txtdump.c:339:11: warning: unused variable 'j' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c:339:9: warning: unused variable 'm' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c:339:7: warning: unused variable 'i' [-Wunused-variable] int i,m,j; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/viewit.c -fPIC -DPIC -o .libs/viewit.o ../../../src/gmxlib/txtdump.c: In function 'pr_ffparams': ../../../src/gmxlib/txtdump.c:906:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_block_title': ../../../src/gmxlib/txtdump.c:950:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_blocka_title': ../../../src/gmxlib/txtdump.c:963:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_block': ../../../src/gmxlib/txtdump.c:1016:9: warning: unused variable 'j' [-Wunused-variable] int i,j,ok,size,start,end; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_atom': ../../../src/gmxlib/txtdump.c:1120:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_groups': ../../../src/gmxlib/txtdump.c:1151:9: warning: unused variable 'grpnr' [-Wunused-variable] int grpnr[egcNR]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/txtdump.c:51: ../../../src/gmxlib/txtdump.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/txtdump.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/txtdump.c:976:13: warning: 'low_pr_block' defined but not used [-Wunused-function] static void low_pr_block(FILE *fp,int indent,const char *title,t_block *block, bool bShowNumbers) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o writeps.lo ../../../src/gmxlib/writeps.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/wman.c -fPIC -DPIC -o .libs/wman.o In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/viewit.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/wgms.c -fPIC -DPIC -o .libs/wgms.o In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/trxio.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/trxio.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/trxio.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/trxio.c:53:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/wgms.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdrd.lo ../../../src/gmxlib/xdrd.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xtcio.lo ../../../src/gmxlib/xtcio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/writeps.c -fPIC -DPIC -o .libs/writeps.o In file included from ../../../src/gmxlib/writeps.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xtcio.c -fPIC -DPIC -o .libs/xtcio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xdrd.c -fPIC -DPIC -o .libs/xdrd.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xvgr.lo ../../../src/gmxlib/xvgr.c ../../../src/gmxlib/wman.c: In function 'mydate': ../../../src/gmxlib/wman.c:168:15: warning: unused variable 'num' [-Wunused-variable] const char *num[] = { "01", "02", "03", "04", "05", "06","07", "08", "09" }; ^ ../../../src/gmxlib/wman.c: In function 'print_tty_formatted': ../../../src/gmxlib/wman.c:510:16: warning: unused variable 'j' [-Wunused-variable] int buflen,i,j; ^ ../../../src/gmxlib/wman.c: In function 'write_wikiman': ../../../src/gmxlib/wman.c:631:14: warning: unused variable 'tmp2' [-Wunused-variable] char *tmp,*tmp2; ^ ../../../src/gmxlib/wman.c:630:17: warning: unused variable 'link' [-Wunused-variable] char buf[256],link[10]; ^ ../../../src/gmxlib/wman.c: In function 'write_htmlman': ../../../src/gmxlib/wman.c:682:8: warning: unused variable 'link' [-Wunused-variable] char link[10],tmp[255]; ^ ../../../src/gmxlib/wman.c: In function 'write_py': ../../../src/gmxlib/wman.c:925:8: warning: unused variable 'bHidden' [-Wunused-variable] bool bHidden; ^ In file included from ../../../src/gmxlib/wman.c:48:0: ../../../src/gmxlib/wman.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o libxdrf.lo ../../../src/gmxlib/libxdrf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xvgr.c -fPIC -DPIC -o .libs/xvgr.o ../../../src/gmxlib/xvgr.c: In function 'use_xmgr': ../../../src/gmxlib/xvgr.c:56:8: warning: unused variable 'bXMGR' [-Wunused-variable] bool bXMGR; ^ ../../../src/gmxlib/xvgr.c: In function 'read_xvg_time': ../../../src/gmxlib/xvgr.c:402:14: warning: unused variable 'tend' [-Wunused-variable] double dbl,tend=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/xvgr.c:45: ../../../src/gmxlib/xvgr.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/xvgr.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/xvgr.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/xvgr.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/libxdrf.c -fPIC -DPIC -o .libs/libxdrf.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/xtcio.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/xtcio.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_arpack.lo ../../../src/gmxlib/gmx_arpack.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dihres.lo ../../../src/gmxlib/dihres.c In file included from ../../../include/xdrf.h:41:0, from ../../../src/gmxlib/libxdrf.c:46: ../../../src/gmxlib/libxdrf.c:145:10: warning: return type defaults to 'int' [-Wimplicit-int] F77_FUNC(xdrfshort,XDRFSHORT)(int *xdrid, short *sp, int *ret) ^ ../../src/config.h:28:29: note: in definition of macro 'F77_FUNC' #define F77_FUNC(name,NAME) name ## _ ^ ../../../src/gmxlib/libxdrf.c: In function 'xdr3dfcoord': ../../../src/gmxlib/libxdrf.c:705:9: warning: unused variable 'rc' [-Wunused-variable] int rc; ^ ../../../src/gmxlib/libxdrf.c: In function 'xtc_get_next_frame_start': ../../../src/gmxlib/libxdrf.c:1374:9: warning: unused variable 'inp' [-Wunused-variable] int inp; ^ ../../../src/gmxlib/libxdrf.c: In function 'xdr_xtc_seek_time': ../../../src/gmxlib/libxdrf.c:1522:9: warning: unused variable 'res' [-Wunused-variable] int res; ^ ../../../src/gmxlib/libxdrf.c: In function 'xtc_get_last_frame_number': ../../../src/gmxlib/libxdrf.c:1691:9: warning: unused variable 'res' [-Wunused-variable] int res; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/libxdrf.c:45: ../../../src/gmxlib/libxdrf.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/libxdrf.c: In function 'xdrfshort_': ../../../src/gmxlib/libxdrf.c:149:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/dihres.c -fPIC -DPIC -o .libs/dihres.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tcontrol.lo ../../../src/gmxlib/tcontrol.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_arpack.c -fPIC -DPIC -o .libs/gmx_arpack.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o splitter.lo ../../../src/gmxlib/splitter.c ../../../src/gmxlib/dihres.c: In function 'ta_dihres': ../../../src/gmxlib/dihres.c:77:30: warning: unused variable 'dp2' [-Wunused-variable] real phi0,phi,ddphi,ddp,dp,dp2,dphi,kfac,cos_phi,sign,d2r,fc; ^ ../../../src/gmxlib/dihres.c:76:29: warning: unused variable 'typep' [-Wunused-variable] int ai,aj,ak,al,i,k,type,typep,label,power,t1,t2,t3; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/dihres.c:46: ../../../src/gmxlib/dihres.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/dihres.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/dihres.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/tcontrol.c -fPIC -DPIC -o .libs/tcontrol.o In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/tcontrol.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/tcontrol.c:61:22: warning: 'timeconvert' defined but not used [-Wunused-variable] static t_timeconvert timeconvert[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_cyclecounter.lo ../../../src/gmxlib/gmx_cyclecounter.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/splitter.c -fPIC -DPIC -o .libs/splitter.o ../../../src/gmxlib/splitter.c: In function 'split_force2': ../../../src/gmxlib/splitter.c:112:17: warning: variable 'type' set but not used [-Wunused-but-set-variable] int i,j,k,type,nodeid,nratoms,tnr; ^ ../../../src/gmxlib/splitter.c:112:13: warning: unused variable 'j' [-Wunused-variable] int i,j,k,type,nodeid,nratoms,tnr; ^ ../../../src/gmxlib/splitter.c: In function 'mk_border': ../../../src/gmxlib/splitter.c:244:14: warning: unused variable 'j' [-Wunused-variable] int i,j,is,ic,ns,nc,nbor; ^ ../../../src/gmxlib/splitter.c: In function 'split_blocks': ../../../src/gmxlib/splitter.c:316:11: warning: unused variable 'bSHK' [-Wunused-variable] bool bSHK; ^ ../../../src/gmxlib/splitter.c:312:19: warning: unused variable 'last_shk' [-Wunused-variable] int nodeid,last_shk,nbor; ^ ../../../src/gmxlib/splitter.c:311:17: warning: unused variable 'ai' [-Wunused-variable] int i,ii,ai,b0,b1; ^ ../../../src/gmxlib/splitter.c:311:14: warning: unused variable 'ii' [-Wunused-variable] int i,ii,ai,b0,b1; ^ ../../../src/gmxlib/splitter.c: In function 'merge_sid': ../../../src/gmxlib/splitter.c:556:8: warning: unused variable 'nChanged' [-Wunused-variable] int nChanged; ^ ../../../src/gmxlib/splitter.c: In function 'gen_sblocks': ../../../src/gmxlib/splitter.c:654:11: warning: unused variable 'isid' [-Wunused-variable] int isid,nsid; ^ ../../../src/gmxlib/splitter.c:652:27: warning: unused variable 'n' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:20: warning: unused variable 'istart' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:18: warning: unused variable 'k' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:16: warning: unused variable 'j' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c: In function 'split_top': ../../../src/gmxlib/splitter.c:755:21: warning: unused variable 'minidx' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:755:15: warning: unused variable 'ihome' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:755:7: warning: unused variable 'minhome' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:754:14: warning: unused variable 'ia' [-Wunused-variable] t_iatom *ia; ^ ../../../src/gmxlib/splitter.c:753:31: warning: unused variable 'nrd' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:27: warning: unused variable 'nra' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:13: warning: unused variable 'nvsite_constr' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:7: warning: unused variable 'ftype' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:748:59: warning: unused variable 'nodeid' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:52: warning: unused variable 'bstart' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:47: warning: unused variable 'send' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:40: warning: unused variable 'sstart' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:32: warning: unused variable 'maxatom' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:18: warning: unused variable 'i' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c: At top level: ../../../src/gmxlib/splitter.c:726:17: warning: 'block2blocka' defined but not used [-Wunused-function] static t_blocka block2blocka(t_block *block) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_cyclecounter.c -fPIC -DPIC -o .libs/gmx_cyclecounter.o /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libgmx_mpi.la -rpath /usr/lib64 3dview.lo atomprop.lo bondfree.lo calcgrid.lo calch.lo checkpoint.lo confio.lo copyrite.lo disre.lo do_fit.lo enxio.lo ewald_util.lo gmx_fatal.lo ffscanf.lo filenm.lo futil.lo gbutil.lo gmxfio.lo ifunc.lo index.lo cinvsqrtdata.lo invblock.lo macros.lo orires.lo sparsematrix.lo main.lo maths.lo matio.lo mshift.lo mtop_util.lo mtxio.lo mvdata.lo names.lo network.lo nrama.lo nrjac.lo nrnb.lo pargs.lo pbc.lo pdbio.lo princ.lo rando.lo random.lo gmx_random.lo rbin.lo readinp.lo replace.lo rmpbc.lo shift_util.lo sortwater.lo smalloc.lo statutil.lo strdb.lo string2.lo symtab.lo topsort.lo tpxio.lo trnio.lo trxio.lo txtdump.lo typedefs.lo viewit.lo wgms.lo wman.lo writeps.lo xdrd.lo xtcio.lo xvgr.lo libxdrf.lo gmx_arpack.lo dihres.lo tcontrol.lo splitter.lo gmx_cyclecounter.lo nonbonded/libnonbonded.la gmx_blas/libblas.la gmx_lapack/liblapack.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath mpicc -shared .libs/3dview.o .libs/atomprop.o .libs/bondfree.o .libs/calcgrid.o .libs/calch.o .libs/checkpoint.o .libs/confio.o .libs/copyrite.o .libs/disre.o .libs/do_fit.o .libs/enxio.o .libs/ewald_util.o .libs/gmx_fatal.o .libs/ffscanf.o .libs/filenm.o .libs/futil.o .libs/gbutil.o .libs/gmxfio.o .libs/ifunc.o .libs/index.o .libs/cinvsqrtdata.o .libs/invblock.o .libs/macros.o .libs/orires.o .libs/sparsematrix.o .libs/main.o .libs/maths.o .libs/matio.o .libs/mshift.o .libs/mtop_util.o .libs/mtxio.o .libs/mvdata.o .libs/names.o .libs/network.o .libs/nrama.o .libs/nrjac.o .libs/nrnb.o .libs/pargs.o .libs/pbc.o .libs/pdbio.o .libs/princ.o .libs/rando.o .libs/random.o .libs/gmx_random.o .libs/rbin.o .libs/readinp.o .libs/replace.o .libs/rmpbc.o .libs/shift_util.o .libs/sortwater.o .libs/smalloc.o .libs/statutil.o .libs/strdb.o .libs/string2.o .libs/symtab.o .libs/topsort.o .libs/tpxio.o .libs/trnio.o .libs/trxio.o .libs/txtdump.o .libs/typedefs.o .libs/viewit.o .libs/wgms.o .libs/wman.o .libs/writeps.o .libs/xdrd.o .libs/xtcio.o .libs/xvgr.o .libs/libxdrf.o .libs/gmx_arpack.o .libs/dihres.o .libs/tcontrol.o .libs/splitter.o .libs/gmx_cyclecounter.o -Wl,--whole-archive nonbonded/.libs/libnonbonded.a gmx_blas/.libs/libblas.a gmx_lapack/.libs/liblapack.a -Wl,--no-whole-archive -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lgslcblas -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libgmx_mpi.so.5 -o .libs/libgmx_mpi.so.5.0.0 (cd .libs && rm -f libgmx_mpi.so.5 && ln -s libgmx_mpi.so.5.0.0 libgmx_mpi.so.5) (cd .libs && rm -f libgmx_mpi.so && ln -s libgmx_mpi.so.5.0.0 libgmx_mpi.so) creating libgmx_mpi.la (cd .libs && rm -f libgmx_mpi.la && ln -s ../libgmx_mpi.la libgmx_mpi.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' Making all in mdlib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib' /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcmu.lo ../../../src/mdlib/calcmu.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcvir.lo ../../../src/mdlib/calcvir.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o constr.lo ../../../src/mdlib/constr.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o coupling.lo ../../../src/mdlib/coupling.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec.lo ../../../src/mdlib/domdec.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_con.lo ../../../src/mdlib/domdec_con.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_network.lo ../../../src/mdlib/domdec_network.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_setup.lo ../../../src/mdlib/domdec_setup.c mkdir .libs mkdir .libs mkdir: cannot create directory '.libs': File exists mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/calcmu.c -fPIC -DPIC -o .libs/calcmu.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_setup.c -fPIC -DPIC -o .libs/domdec_setup.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/calcvir.c -fPIC -DPIC -o .libs/calcvir.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/constr.c -fPIC -DPIC -o .libs/constr.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/coupling.c -fPIC -DPIC -o .libs/coupling.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_network.c -fPIC -DPIC -o .libs/domdec_network.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_con.c -fPIC -DPIC -o .libs/domdec_con.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec.c -fPIC -DPIC -o .libs/domdec.o ../../../src/mdlib/coupling.c: In function 'berendsen_pcoupl': ../../../src/mdlib/coupling.c:267:11: warning: unused variable 'ptr' [-Wunused-variable] char *ptr,buf[STRLEN]; ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/coupling.c:42: ../../../src/mdlib/coupling.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/update.h:49, from ../../../src/mdlib/coupling.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/update.h:49, from ../../../src/mdlib/coupling.c:42: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/calcvir.c:42:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/calcvir.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/calcvir.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/calcvir.c:47:13: warning: 'dprod1' defined but not used [-Wunused-function] static void dprod1(rvec vir,real x,rvec f) ^ ../../../src/mdlib/calcvir.c:160:13: warning: 'lo_fcv2' defined but not used [-Wunused-function] static void lo_fcv2(int i0,int i1, ^ ../../../src/mdlib/domdec_con.c: In function 'dd_make_local_vsites': ../../../src/mdlib/domdec_con.c:925:25: warning: unused variable 'gat' [-Wunused-variable] int ftype,nral,i,j,gat,a; ^ ../../../src/mdlib/domdec_con.c: In function 'init_domdec_vsites': ../../../src/mdlib/domdec_con.c:1047:31: warning: unused variable 'dc' [-Wunused-variable] gmx_domdec_constraints_t *dc; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_con.c:25: ../../../src/mdlib/domdec_con.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_con.c:25:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/constr.c: In function 'too_many_constraint_warnings': ../../../src/mdlib/constr.c:132:9: warning: unused variable 'abort' [-Wunused-variable] char *abort="- aborting to avoid logfile runaway.\n" ^ ../../../src/mdlib/constr.c: In function 'constrain': ../../../src/mdlib/constr.c:234:11: warning: unused variable 'ncons' [-Wunused-variable] int ncons,error; ^ ../../../src/mdlib/constr.c: In function 'init_constraints': ../../../src/mdlib/constr.c:772:37: warning: unused variable 'natoms' [-Wunused-variable] int ncon,nset,nmol,settle_type,i,natoms,mt,nflexcon; ^ ../../../src/mdlib/constr.c: In function 'inter_charge_group_constraints': ../../../src/mdlib/constr.c:903:8: warning: unused variable 'nat' [-Wunused-variable] int nat,*at2cg,cg,a,i; ^ In file included from ../../../src/mdlib/constr.c:42:0: ../../../src/mdlib/constr.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/constr.c:45: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/mdlib/constr.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/mdlib/constr.c:45: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/constr.c:53:0: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/mdlib/constr.c:110:12: warning: 'icomp' defined but not used [-Wunused-function] static int icomp(const void *p1, const void *p2) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_top.lo ../../../src/mdlib/domdec_top.c In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/calcmu.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/calcmu.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ebin.lo ../../../src/mdlib/ebin.c ../../../src/mdlib/domdec_setup.c: In function 'guess_npme': ../../../src/mdlib/domdec_setup.c:83:13: warning: unused variable 'try' [-Wunused-variable] t_inputrec try; ^ ../../../src/mdlib/domdec_setup.c:82:16: warning: unused variable 'nky' [-Wunused-variable] int npme,nkx,nky,ndiv,*div,*mdiv,ldiv; ^ ../../../src/mdlib/domdec_setup.c:82:12: warning: unused variable 'nkx' [-Wunused-variable] int npme,nkx,nky,ndiv,*div,*mdiv,ldiv; ^ ../../../src/mdlib/domdec_setup.c: In function 'assign_factors': ../../../src/mdlib/domdec_setup.c:329:13: warning: unused variable 'z' [-Wunused-variable] int x,y,z,i; ^ ../../../src/mdlib/domdec_setup.c: In function 'dd_choose_grid': ../../../src/mdlib/domdec_setup.c:493:19: warning: unused variable 'nky' [-Wunused-variable] int npme,nkx,nky; ^ ../../../src/mdlib/domdec_setup.c:493:15: warning: unused variable 'nkx' [-Wunused-variable] int npme,nkx,nky; ^ ../../../src/mdlib/domdec_setup.c:493:10: warning: unused variable 'npme' [-Wunused-variable] int npme,nkx,nky; ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/domdec_setup.c:29: ../../../src/mdlib/domdec_setup.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_setup.c:32: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_setup.c:32:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_top.c -fPIC -DPIC -o .libs/domdec_top.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o edsam.lo ../../../src/mdlib/edsam.c ../../../src/mdlib/domdec.c: In function 'dd_move_cellx': ../../../src/mdlib/domdec.c:785:41: warning: unused variable 'k' [-Wunused-variable] int d,d1,dim,dim1,pos,buf_size,i,j,k,p,npulse; ^ ../../../src/mdlib/domdec.c:785:19: warning: unused variable 'dim1' [-Wunused-variable] int d,d1,dim,dim1,pos,buf_size,i,j,k,p,npulse; ^ ../../../src/mdlib/domdec.c: In function 'dd_collect_vec': ../../../src/mdlib/domdec.c:1212:11: warning: unused variable 'buf' [-Wunused-variable] rvec *buf=NULL; ^ ../../../src/mdlib/domdec.c:1211:18: warning: unused variable 'nalloc' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:16: warning: unused variable 'a' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:14: warning: unused variable 'c' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:12: warning: unused variable 'i' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:10: warning: unused variable 'n' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1210:26: warning: unused variable 'ma' [-Wunused-variable] gmx_domdec_master_t *ma; ^ ../../../src/mdlib/domdec.c: In function 'dd_distribute_vec_scatterv': ../../../src/mdlib/domdec.c:1427:18: warning: unused variable 'nalloc' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c: In function 'gmx_ddcoord2pmeindex': ../../../src/mdlib/domdec.c:1805:28: warning: unused variable 'nc' [-Wunused-variable] ivec coords,coords_pme,nc; ^ ../../../src/mdlib/domdec.c:1805:17: warning: unused variable 'coords_pme' [-Wunused-variable] ivec coords,coords_pme,nc; ^ ../../../src/mdlib/domdec.c: In function 'make_dd_indices': ../../../src/mdlib/domdec.c:2107:11: warning: variable 'bLocalCG' set but not used [-Wunused-but-set-variable] char *bLocalCG; ^ ../../../src/mdlib/domdec.c: In function 'check_bLocalCG': ../../../src/mdlib/domdec.c:2162:9: warning: unused variable 'ncg' [-Wunused-variable] int ncg,i,ngl,nerr; ^ ../../../src/mdlib/domdec.c: In function 'dd_redistribute_cg': ../../../src/mdlib/domdec.c:3706:49: warning: unused variable 'cell_d' [-Wunused-variable] int c,i,cg,k,k0,k1,d,dim,dim2,dir,d2,d3,d4,cell_d; ^ ../../../src/mdlib/domdec.c:3706:46: warning: unused variable 'd4' [-Wunused-variable] int c,i,cg,k,k0,k1,d,dim,dim2,dir,d2,d3,d4,cell_d; ^ ../../../src/mdlib/domdec.c: In function 'get_load_distribution': ../../../src/mdlib/domdec.c:4326:16: warning: unused variable 'cid' [-Wunused-variable] int d,dim,cid,i,pos; ^ ../../../src/mdlib/domdec.c: In function 'setup_dd_grid': ../../../src/mdlib/domdec.c:4781:10: warning: unused variable 'bZYX' [-Wunused-variable] bool bZYX; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ewald.lo ../../../src/mdlib/ewald.c ../../../src/mdlib/domdec.c: In function 'check_dlb_support': ../../../src/mdlib/domdec.c:5598:9: warning: label 'edlbYES' defined but not used [-Wunused-label] edlbYES: ^ ../../../src/mdlib/domdec.c:5594:9: warning: label 'edlbAUTO' defined but not used [-Wunused-label] edlbAUTO: ^ ../../../src/mdlib/domdec.c:5592:9: warning: label 'edlbNO' defined but not used [-Wunused-label] edlbNO: ^ ../../../src/mdlib/domdec.c:5553:19: warning: unused variable 'dd' [-Wunused-variable] gmx_domdec_t *dd; ^ ../../../src/mdlib/domdec.c: In function 'init_domain_decomposition': ../../../src/mdlib/domdec.c:5652:14: warning: unused variable 'j' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c:5652:12: warning: unused variable 'i' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c:5652:10: warning: unused variable 'd' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c: In function 'turn_on_dlb': ../../../src/mdlib/domdec.c:6010:10: warning: unused variable 'buf' [-Wunused-variable] char buf[STRLEN]; ^ ../../../src/mdlib/domdec.c: In function 'dd_init_bondeds': ../../../src/mdlib/domdec.c:6086:10: warning: unused variable 'd' [-Wunused-variable] int d; ^ ../../../src/mdlib/domdec.c:6085:10: warning: unused variable 'bBondComm' [-Wunused-variable] bool bBondComm; ^ ../../../src/mdlib/domdec.c: In function 'setup_dd_communication': ../../../src/mdlib/domdec.c:6486:64: warning: unused variable 'inv_ncg' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:58: warning: unused variable 'r2inc' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:47: warning: unused variable 'r_1' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:43: warning: unused variable 'r_0' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:23: warning: unused variable 'r_scomm2' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:10: warning: unused variable 'r_mb' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/edsam.c -fPIC -DPIC -o .libs/edsam.o ../../../src/mdlib/domdec.c: In function 'dd_partition_system': ../../../src/mdlib/domdec.c:7481:12: warning: unused variable 'j' [-Wunused-variable] int i,j,n,cg0=0,ncg_home_old=-1; ^ ../../../src/mdlib/domdec_top.c: In function 'print_missing_interactions_mb': ../../../src/mdlib/domdec_top.c:113:56: warning: unused variable 'a_gl' [-Wunused-variable] int ftype,ftype_j,nral,i,j_mol,j,k,a0,a0_mol,mol,a,a_gl; ^ ../../../src/mdlib/domdec_top.c:113:38: warning: unused variable 'k' [-Wunused-variable] int ftype,ftype_j,nral,i,j_mol,j,k,a0,a0_mol,mol,a,a_gl; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec.c:31: ../../../src/mdlib/domdec.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec.c:31:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/domdec.c:41: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/domdec.c:44: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/domdec_top.c: In function 'global_atomnr_to_moltype_ind': ../../../src/mdlib/domdec_top.c:349:7: warning: unused variable 'molb' [-Wunused-variable] int molb; ^ ../../../src/mdlib/domdec_top.c: In function 'count_excls': ../../../src/mdlib/domdec_top.c:364:11: warning: unused variable 'n_inter' [-Wunused-variable] int n,n_inter,cg,at0,at1,at,excl,atj; ^ ../../../src/mdlib/domdec_top.c: In function 'dd_make_reverse_top': ../../../src/mdlib/domdec_top.c:611:19: warning: unused variable 'n_recursive_vsite' [-Wunused-variable] int mb,natoms,n_recursive_vsite,nexcl,nexcl_icg,a; ^ ../../../src/mdlib/domdec_top.c: In function 'add_vsite': ../../../src/mdlib/domdec_top.c:760:37: warning: unused variable 'iatoms_r' [-Wunused-variable] t_iatom tiatoms[1+MAXATOMLIST],*iatoms_r; ^ ../../../src/mdlib/domdec_top.c: In function 'dd_make_local_top': ../../../src/mdlib/domdec_top.c:1408:10: warning: unused variable 'bUniqueExcl' [-Wunused-variable] bool bUniqueExcl,bRCheckMB,bRCheck2B,bRCheckExcl; ^ ../../../src/mdlib/domdec_top.c: In function 'check_link': ../../../src/mdlib/domdec_top.c:1590:12: warning: unused variable 'aj' [-Wunused-variable] int k,aj; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ewald.c -fPIC -DPIC -o .libs/ewald.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ebin.c -fPIC -DPIC -o .libs/ebin.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_top.c:31: ../../../src/mdlib/domdec_top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_top.c:31:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/edsam.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/edsam.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/edsam.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/edsam.c:316:13: warning: 'dump_xcoll' defined but not used [-Wunused-function] static void dump_xcoll(t_edpar *edi, struct t_do_edsam *buf, t_commrec *cr, int step) ^ ../../../src/mdlib/edsam.c:387:13: warning: 'dump_edi' defined but not used [-Wunused-function] static void dump_edi(t_edpar *edpars, t_commrec *cr, int nr_edi) ^ ../../../src/mdlib/edsam.c:439:13: warning: 'dump_rotmat' defined but not used [-Wunused-function] static void dump_rotmat(FILE* out,matrix rotmat) ^ ../../../src/mdlib/edsam.c:448:13: warning: 'dump_rvec' defined but not used [-Wunused-function] static void dump_rvec(FILE *out, int dim, rvec *x) ^ ../../../src/mdlib/edsam.c:459:13: warning: 'dump_mat' defined but not used [-Wunused-function] static void dump_mat(FILE* out, int dim, double** mat) ^ ../../../src/mdlib/edsam.c:964:13: warning: 'get_flood_enx_names' defined but not used [-Wunused-function] static void get_flood_enx_names(t_edpar *edi, char** names, int *nnames) /* get header of energies */ ^ ../../../src/mdlib/edsam.c:983:13: warning: 'get_flood_energies' defined but not used [-Wunused-function] static void get_flood_energies(t_edpar *edi, real Vfl[],int nnames) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/ewald.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ewald.c:43:0: ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/ewald.c:44:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fftgrid.lo ../../../src/mdlib/fftgrid.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/fftgrid.c -fPIC -DPIC -o .libs/fftgrid.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o force.lo ../../../src/mdlib/force.c In file included from ../../../include/fftgrid.h:46:0, from ../../../src/mdlib/fftgrid.c:51: ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/ebin.c: In function 'add_ebin': ../../../src/mdlib/ebin.c:89:18: warning: unused variable 'sigma' [-Wunused-variable] double e,sum,sigma,invmm,diff; ^ ../../../src/mdlib/ebin.c:89:14: warning: unused variable 'sum' [-Wunused-variable] double e,sum,sigma,invmm,diff; ^ In file included from ../../../src/mdlib/ebin.c:50:0: ../../../src/mdlib/ebin.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ebin.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/force.c -fPIC -DPIC -o .libs/force.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ghat.lo ../../../src/mdlib/ghat.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o init.lo ../../../src/mdlib/init.c ../../../src/mdlib/force.c: In function 'check_solvent_cg': ../../../src/mdlib/force.c:162:23: warning: unused variable 'excl' [-Wunused-variable] const t_blocka * excl; ^ ../../../src/mdlib/force.c: In function 'check_solvent': ../../../src/mdlib/force.c:406:23: warning: variable 'mols' set but not used [-Wunused-but-set-variable] const t_block * mols; ^ ../../../src/mdlib/force.c: In function 'set_avcsixtwelve': ../../../src/mdlib/force.c:687:46: warning: unused variable 'n' [-Wunused-variable] int mb,nmol,nmolc,i,j,tpi,tpj,j1,j2,k,n,nexcl,q; ^ ../../../src/mdlib/force.c: In function 'init_forcerec': ../../../src/mdlib/force.c:1048:16: warning: variable 'nbl' set but not used [-Wunused-but-set-variable] t_nblists *nbl; ^ ../../../src/mdlib/force.c:1043:26: warning: unused variable 'ngrp' [-Wunused-variable] int i,j,m,natoms,ngrp,negp_pp,negptable,egi,egj; ^ ../../../src/mdlib/force.c:1043:15: warning: unused variable 'j' [-Wunused-variable] int i,j,m,natoms,ngrp,negp_pp,negptable,egi,egj; ^ ../../../src/mdlib/force.c: In function 'do_force_lowlevel': ../../../src/mdlib/force.c:1540:13: warning: unused variable 'bDoEpot' [-Wunused-variable] bool bDoEpot,bSepDVDL,bSB; ^ ../../../src/mdlib/force.c:1539:15: warning: unused variable 'nit' [-Wunused-variable] int i,nit,status; ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/force.c:62: ../../../src/mdlib/force.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/mdlib/force.c:64: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/mdlib/force.c:64: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/force.c:69:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ghat.c -fPIC -DPIC -o .libs/ghat.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/init.c -fPIC -DPIC -o .libs/init.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdatom.lo ../../../src/mdlib/mdatom.c In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/ghat.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ghat.c:44:0: ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/ghat.c:47: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/init.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/init.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/init.c:51: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/init.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdebin.lo ../../../src/mdlib/mdebin.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mdatom.c -fPIC -DPIC -o .libs/mdatom.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o minimize.lo ../../../src/mdlib/minimize.c ../../../src/mdlib/mdatom.c: In function 'init_mdatoms': ../../../src/mdlib/mdatom.c:56:12: warning: unused variable 'ilist' [-Wunused-variable] t_ilist *ilist; ^ ../../../src/mdlib/mdatom.c:51:17: warning: unused variable 'nmol' [-Wunused-variable] int mb,a,g,nmol; ^ ../../../src/mdlib/mdatom.c:51:15: warning: unused variable 'g' [-Wunused-variable] int mb,a,g,nmol; ^ ../../../src/mdlib/mdatom.c:51:10: warning: unused variable 'mb' [-Wunused-variable] int mb,a,g,nmol; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mdebin.c -fPIC -DPIC -o .libs/mdebin.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mvxvf.lo ../../../src/mdlib/mvxvf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/minimize.c -fPIC -DPIC -o .libs/minimize.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ns.lo ../../../src/mdlib/ns.c ../../../src/mdlib/mdebin.c: In function 'print_ebin': ../../../src/mdlib/mdebin.c:530:31: warning: unused variable 'nor' [-Wunused-variable] int i,j,n,ni,nj,ndr,nor; ^ ../../../src/mdlib/mdebin.c:530:27: warning: unused variable 'ndr' [-Wunused-variable] int i,j,n,ni,nj,ndr,nor; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/mdebin.c:48: ../../../src/mdlib/mdebin.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/mdebin.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mvxvf.c -fPIC -DPIC -o .libs/mvxvf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ns.c -fPIC -DPIC -o .libs/ns.o ../../../src/mdlib/minimize.c: In function 'get_f_norm_max': ../../../src/mdlib/minimize.c:153:14: warning: unused variable 'fmax2_0' [-Wunused-variable] real fmax2,fmax2_0,fam; ^ ../../../src/mdlib/minimize.c: In function 'evaluate_energy': ../../../src/mdlib/minimize.c:573:12: warning: unused variable 'state' [-Wunused-variable] t_state *state; ^ ../../../src/mdlib/minimize.c: In function 'do_cg': ../../../src/mdlib/minimize.c:813:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate=0; ^ ../../../src/mdlib/minimize.c:798:26: warning: unused variable 'sum' [-Wunused-variable] double gpa,gpb,gpc,tmp,sum[2],minstep; ^ ../../../src/mdlib/minimize.c:797:28: warning: unused variable 'sfm' [-Wunused-variable] rvec *f_global,*p,*sf,*sfm; ^ ../../../src/mdlib/minimize.c: In function 'do_lbfgs': ../../../src/mdlib/minimize.c:1329:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate; ^ ../../../src/mdlib/minimize.c:1320:20: warning: variable 'first' set but not used [-Wunused-but-set-variable] bool converged,first; ^ ../../../src/mdlib/minimize.c: In function 'do_steep': ../../../src/mdlib/minimize.c:1957:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate=0; ^ ../../../src/mdlib/minimize.c:1946:16: warning: unused variable 'dvdlambda' [-Wunused-variable] real ustep,dvdlambda,fnormn; ^ ../../../src/mdlib/minimize.c:1945:19: warning: unused variable 'constepsize' [-Wunused-variable] real stepsize,constepsize; ^ ../../../src/mdlib/minimize.c: In function 'do_nm': ../../../src/mdlib/minimize.c:2163:22: warning: unused variable 'fmax' [-Wunused-variable] real fnorm,fmax; ^ ../../../src/mdlib/minimize.c:2163:16: warning: unused variable 'fnorm' [-Wunused-variable] real fnorm,fmax; ^ ../../../src/mdlib/minimize.c:2151:16: warning: unused variable 'nfmax' [-Wunused-variable] int nfmax,count; ^ ../../../src/mdlib/minimize.c:2149:16: warning: unused variable 'bNS' [-Wunused-variable] bool bNS; ^ ../../../src/mdlib/minimize.c:2148:18: warning: variable 'lambda' set but not used [-Wunused-but-set-variable] real t,lambda,t0,lam0; ^ ../../../src/mdlib/minimize.c: In function 'do_tpi': ../../../src/mdlib/minimize.c:2419:18: warning: unused variable 'end' [-Wunused-variable] int i,start,end; ^ ../../../src/mdlib/minimize.c:2419:12: warning: unused variable 'start' [-Wunused-variable] int i,start,end; ^ ../../../src/mdlib/minimize.c:2404:15: warning: unused variable 'TPI' [-Wunused-variable] const char *TPI="Test Particle Insertion"; ^ In file included from ../../../src/mdlib/minimize.c:47:0: ../../../src/mdlib/minimize.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/update.h:49, from ../../../src/mdlib/minimize.c:59: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/update.h:49, from ../../../src/mdlib/minimize.c:59: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/minimize.c:63: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/minimize.c:83: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/minimize.c:493:13: warning: 'do_x_step' defined but not used [-Wunused-function] static void do_x_step(t_commrec *cr,int n,rvec *x1,real a,rvec *f,rvec *x2) ^ ../../../src/mdlib/minimize.c:515:13: warning: 'do_x_sub' defined but not used [-Wunused-function] static void do_x_sub(t_commrec *cr,int n,rvec *x1,rvec *x2,real a,rvec *f) ^ ../../../src/mdlib/ns.c: In function 'new_i_nblist': ../../../src/mdlib/ns.c:394:20: warning: unused variable 'nshift' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c:394:14: warning: unused variable 'k' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c:394:12: warning: unused variable 'i' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c: In function 'put_in_list': ../../../src/mdlib/ns.c:546:25: warning: unused variable 'rlj' [-Wunused-variable] real qi,qiB,qq,rlj; ^ ../../../src/mdlib/ns.c:546:22: warning: unused variable 'qq' [-Wunused-variable] real qi,qiB,qq,rlj; ^ ../../../src/mdlib/ns.c:541:23: warning: unused variable 'len' [-Wunused-variable] int i0,nicg,len; ^ ../../../src/mdlib/ns.c:539:39: warning: unused variable 'ind_ij' [-Wunused-variable] int i,j,jcg,igid,gid,nbl_ind,ind_ij; ^ ../../../src/mdlib/ns.c: In function 'ns_inner_tric': ../../../src/mdlib/ns.c:1283:15: warning: unused variable 'nsbuf' [-Wunused-variable] t_ns_buf *nsbuf; ^ ../../../src/mdlib/ns.c: In function 'ns_inner_rect': ../../../src/mdlib/ns.c:1314:15: warning: unused variable 'nsbuf' [-Wunused-variable] t_ns_buf *nsbuf; ^ ../../../src/mdlib/ns.c: In function 'ns_simple_core': ../../../src/mdlib/ns.c:1365:38: warning: unused variable 'nri' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c:1365:35: warning: unused variable 'i0' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c:1365:26: warning: unused variable 'jcg' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/mvxvf.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/mvxvf.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/ns.c: In function 'nsgrid_core': ../../../src/mdlib/ns.c:1674:58: warning: unused variable 'dcz' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1674:54: warning: unused variable 'dcy' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1674:50: warning: unused variable 'dcx' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1673:13: warning: unused variable 'xi' [-Wunused-variable] rvec xi,*cgcm,grid_offset; ^ ../../../src/mdlib/ns.c:1669:42: warning: unused variable 'nri' [-Wunused-variable] int cg0,cg1,icg=-1,cgsnr,i0,igid,nri,naaj,max_jcg; ^ ../../../src/mdlib/ns.c:1666:45: warning: variable 'grid_z' set but not used [-Wunused-but-set-variable] real gridx,gridy,gridz,grid_x,grid_y,grid_z; ^ ../../../src/mdlib/ns.c: In function 'init_ns': ../../../src/mdlib/ns.c:2177:11: warning: unused variable 'ptr' [-Wunused-variable] char *ptr; ^ ../../../src/mdlib/ns.c: In function 'search_neighbours': ../../../src/mdlib/ns.c:2280:23: warning: unused variable 'cg_end' [-Wunused-variable] int cg_start,cg_end,start,end; ^ ../../../src/mdlib/ns.c:2280:14: warning: unused variable 'cg_start' [-Wunused-variable] int cg_start,cg_end,start,end; ^ ../../../src/mdlib/ns.c:2279:15: warning: unused variable 'i_egp_flags' [-Wunused-variable] bool *i_egp_flags; ^ ../../../src/mdlib/ns.c:2278:15: warning: unused variable 'ptr' [-Wunused-variable] char *ptr; ^ ../../../src/mdlib/ns.c:2274:16: warning: unused variable 'j' [-Wunused-variable] int i,j,m,ngid; ^ ../../../src/mdlib/ns.c:2274:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,ngid; ^ In file included from ../../../src/mdlib/ns.c:50:0: ../../../src/mdlib/ns.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ns.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/ns.c:54:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nsgrid.lo ../../../src/mdlib/nsgrid.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o perf_est.lo ../../../src/mdlib/perf_est.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/nsgrid.c -fPIC -DPIC -o .libs/nsgrid.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/perf_est.c -fPIC -DPIC -o .libs/perf_est.o ../../../src/mdlib/perf_est.c: In function 'n_bonded_dx': ../../../src/mdlib/perf_est.c:62:2: warning: label 'F_CONNBONDS' defined but not used [-Wunused-label] F_CONNBONDS: ndxb = 0; break; ^ ../../../src/mdlib/perf_est.c:61:2: warning: label 'F_POSRES' defined but not used [-Wunused-label] F_POSRES: ndxb = 1; break; ^ ../../../src/mdlib/perf_est.c: In function 'pme_load_estimate': ../../../src/mdlib/perf_est.c:89:21: warning: unused variable 'fljtab' [-Wunused-variable] float fq,fqlj,flj,fljtab,fqljw,fqw,fqspread,ffft,fbond; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/perf_est.c:41: ../../../src/mdlib/perf_est.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/perf_est.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pme.lo ../../../src/mdlib/pme.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pme_pp.lo ../../../src/mdlib/pme_pp.c ../../../src/mdlib/nsgrid.c: In function 'init_grid': ../../../src/mdlib/nsgrid.c:181:10: warning: unused variable 'm' [-Wunused-variable] int d,m; ^ ../../../src/mdlib/nsgrid.c:181:8: warning: unused variable 'd' [-Wunused-variable] int d,m; ^ ../../../src/mdlib/nsgrid.c: In function 'grid_first': ../../../src/mdlib/nsgrid.c:278:10: warning: unused variable 'cx' [-Wunused-variable] ivec cx; ^ ../../../src/mdlib/nsgrid.c: In function 'fill_grid': ../../../src/mdlib/nsgrid.c:421:10: warning: variable 'nrx' set but not used [-Wunused-but-set-variable] int nrx,nry,nrz; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/nsgrid.c:47: ../../../src/mdlib/nsgrid.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/nsgrid.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pme_pp.c -fPIC -DPIC -o .libs/pme_pp.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pppm.lo ../../../src/mdlib/pppm.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pme.c -fPIC -DPIC -o .libs/pme.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pme_pp.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pme_pp.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/pme_pp.c:49: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pppm.c -fPIC -DPIC -o .libs/pppm.o ../../../src/mdlib/pme.c: In function 'init_atomcomm': ../../../src/mdlib/pme.c:1441:22: warning: unused variable 'pgc' [-Wunused-variable] pme_grid_comm_t *pgc; ^ ../../../src/mdlib/pme.c:1440:12: warning: unused variable 'nk' [-Wunused-variable] int nn,nk; ^ ../../../src/mdlib/pme.c:1440:9: warning: unused variable 'nn' [-Wunused-variable] int nn,nk; ^ ../../../src/mdlib/pme.c:1439:27: warning: unused variable 'i' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:25: warning: unused variable 'b' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:19: warning: unused variable 'maxlr' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:14: warning: unused variable 'rbnd' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:9: warning: unused variable 'lbnd' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c: In function 'gmx_pme_init': ../../../src/mdlib/pme.c:1541:25: warning: unused variable 'maxlr' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:20: warning: unused variable 'rbnd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:15: warning: unused variable 'lbnd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:11: warning: unused variable 'd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:9: warning: unused variable 'b' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pme.c:70: ../../../src/mdlib/pme.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pme.c:70:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/pme.c:71:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../src/mdlib/pme.c:81:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/pme.c:198:13: warning: 'pr_grid_dist' defined but not used [-Wunused-function] static void pr_grid_dist(FILE *fp,char *title,t_fftgrid *grid) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pppm.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pppm.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/pppm.c:51: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/pppm.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/pppm.c:616:12: warning: 'gmx_pppm_opt_do' defined but not used [-Wunused-function] static int gmx_pppm_opt_do(FILE *log, gmx_pme_t pme, ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o partdec.lo ../../../src/mdlib/partdec.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/partdec.c -fPIC -DPIC -o .libs/partdec.o ../../../src/mdlib/partdec.c: In function 'gmx_tx': ../../../src/mdlib/partdec.c:83:14: warning: unused variable 'status' [-Wunused-variable] MPI_Status status; ^ ../../../src/mdlib/partdec.c:82:18: warning: unused variable 'flag' [-Wunused-variable] int tag,flag; ^ ../../../src/mdlib/partdec.c: In function 'pr_idef_division': ../../../src/mdlib/partdec.c:343:15: warning: variable 'nr' set but not used [-Wunused-but-set-variable] int i,ftype,nr,nra,m0,m1; ^ ../../../src/mdlib/partdec.c: In function 'create_vsitelist': ../../../src/mdlib/partdec.c:477:7: warning: unused variable 'minidx' [-Wunused-variable] int minidx; ^ ../../../src/mdlib/partdec.c: In function 'setup_parallel_vsites': ../../../src/mdlib/partdec.c:511:15: warning: unused variable 'k' [-Wunused-variable] int i,inr,j,k,ftype; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pull.lo ../../../src/mdlib/pull.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pull.c -fPIC -DPIC -o .libs/pull.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pullutil.lo ../../../src/mdlib/pullutil.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rf_util.lo ../../../src/mdlib/rf_util.c ../../../src/mdlib/pull.c: In function 'apply_forces_grp': ../../../src/mdlib/pull.c:155:20: warning: variable 'end' set but not used [-Wunused-but-set-variable] int i,ii,m,start,end; ^ ../../../src/mdlib/pull.c: In function 'do_constraint': ../../../src/mdlib/pull.c:283:22: warning: unused variable 'mass' [-Wunused-variable] double lambda, rm, mass, invdt=0; ^ ../../../src/mdlib/pull.c:282:10: warning: unused variable 'd0' [-Wunused-variable] double d0,inpr; ^ ../../../src/mdlib/pull.c: In function 'init_pull_group_index': ../../../src/mdlib/pull.c:779:16: warning: variable 'ga2la' set but not used [-Wunused-but-set-variable] gmx_ga2la_t *ga2la=NULL; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/pull.c:46: ../../../src/mdlib/pull.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pull.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pull.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/pull.c:60: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pullutil.c -fPIC -DPIC -o .libs/pullutil.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/rf_util.c -fPIC -DPIC -o .libs/rf_util.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shakef.lo ../../../src/mdlib/shakef.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/shakef.c -fPIC -DPIC -o .libs/shakef.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sim_util.lo ../../../src/mdlib/sim_util.c ../../../src/mdlib/shakef.c: In function 'cshake': ../../../src/mdlib/shakef.c:79:19: warning: unused variable 'tjz' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:79:15: warning: unused variable 'tjy' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:79:11: warning: unused variable 'tjx' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:78:19: warning: unused variable 'tiz' [-Wunused-variable] real tix,tiy,tiz; ^ ../../../src/mdlib/shakef.c:78:15: warning: unused variable 'tiy' [-Wunused-variable] real tix,tiy,tiz; ^ ../../../src/mdlib/shakef.c:78:11: warning: unused variable 'tix' [-Wunused-variable] real tix,tiy,tiz; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/shakef.c:46: ../../../src/mdlib/shakef.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/shakef.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/shakef.c:51:13: warning: 'pv' defined but not used [-Wunused-function] static void pv(FILE *log,char *s,rvec x) ^ ../../../src/mdlib/pullutil.c: In function 'pull_set_pbcatom': ../../../src/mdlib/pullutil.c:85:9: warning: unused variable 'm' [-Wunused-variable] int a,m; ^ ../../../src/mdlib/pullutil.c: In function 'pull_calc_coms': ../../../src/mdlib/pullutil.c:278:9: warning: unused variable 'xx' [-Wunused-variable] rvec *xx[2],x_pbc={0,0,0},dx; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/pullutil.c:45: ../../../src/mdlib/pullutil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pullutil.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pullutil.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/sim_util.c -fPIC -DPIC -o .libs/sim_util.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shellfc.lo ../../../src/mdlib/shellfc.c ../../../src/mdlib/rf_util.c: In function 'RF_excl_correction': ../../../src/mdlib/rf_util.c:59:10: warning: unused variable 'top' [-Wunused-variable] int top,i,j,j1,j2,k,ki; ^ In file included from ../../../src/mdlib/rf_util.c:42:0: ../../../src/mdlib/rf_util.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/rf_util.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/rf_util.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/rf_util.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/shellfc.c -fPIC -DPIC -o .libs/shellfc.o ../../../src/mdlib/sim_util.c: In function 'calc_virial': ../../../src/mdlib/sim_util.c:250:10: warning: unused variable 'virtest' [-Wunused-variable] tensor virtest; ^ ../../../src/mdlib/sim_util.c:249:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/mdlib/sim_util.c: In function 'do_force': ../../../src/mdlib/sim_util.c:348:15: warning: unused variable 'box_size' [-Wunused-variable] static rvec box_size; ^ ../../../src/mdlib/sim_util.c: In function 'calc_enervirdiff': ../../../src/mdlib/sim_util.c:823:13: warning: variable 'r1' set but not used [-Wunused-but-set-variable] double r0,r1,r,rc3,rc9,ea,eb,ec,pa,pb,pc,pd; ^ ../../../src/mdlib/sim_util.c: In function 'finish_run': ../../../src/mdlib/sim_util.c:1134:14: warning: unused variable 'status' [-Wunused-variable] MPI_Status status; ^ ../../../src/mdlib/sim_util.c:1133:10: warning: unused variable 'nrnb_buf' [-Wunused-variable] double nrnb_buf[4]; ^ ../../../src/mdlib/sim_util.c:1132:10: warning: unused variable 'sender' [-Wunused-variable] int sender; ^ ../../../src/mdlib/sim_util.c: In function 'init_md': ../../../src/mdlib/sim_util.c:1222:13: warning: unused variable 'mod' [-Wunused-variable] real tmpt,mod; ^ ../../../src/mdlib/sim_util.c:1222:8: warning: unused variable 'tmpt' [-Wunused-variable] real tmpt,mod; ^ ../../../src/mdlib/sim_util.c:1221:12: warning: unused variable 'n' [-Wunused-variable] int i,j,n; ^ ../../../src/mdlib/sim_util.c:1221:10: warning: unused variable 'j' [-Wunused-variable] int i,j,n; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/sim_util.c:57: ../../../src/mdlib/sim_util.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/sim_util.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/sim_util.c:68: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../src/mdlib/sim_util.c:78:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/shellfc.c: In function 'predict_shells': ../../../src/mdlib/shellfc.c:115:18: warning: unused variable 'dt_3' [-Wunused-variable] real dt_1,dt_2,dt_3,fudge,tm,m1,m2,m3; ^ ../../../src/mdlib/shellfc.c:115:13: warning: unused variable 'dt_2' [-Wunused-variable] real dt_1,dt_2,dt_3,fudge,tm,m1,m2,m3; ^ ../../../src/mdlib/shellfc.c: In function 'init_shell_flexcon': ../../../src/mdlib/shellfc.c:197:32: warning: unused variable 'mt' [-Wunused-variable] int i,j,nmol,type,mb,mt,a_offset,cg,mol,ftype,nra; ^ ../../../src/mdlib/shellfc.c:197:19: warning: unused variable 'nmol' [-Wunused-variable] int i,j,nmol,type,mb,mt,a_offset,cg,mol,ftype,nra; ^ ../../../src/mdlib/shellfc.c: In function 'init_adir': ../../../src/mdlib/shellfc.c:694:12: warning: unused variable 'dx' [-Wunused-variable] rvec p,dx; ^ ../../../src/mdlib/shellfc.c:694:10: warning: unused variable 'p' [-Wunused-variable] rvec p,dx; ^ ../../../src/mdlib/shellfc.c:691:13: warning: unused variable 'scale' [-Wunused-variable] real dt,scale; ^ ../../../src/mdlib/shellfc.c:690:16: warning: unused variable 'gt' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c:690:13: warning: unused variable 'ga' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c:690:10: warning: unused variable 'gf' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c: In function 'relax_shell_flexcon': ../../../src/mdlib/shellfc.c:776:19: warning: unused variable 'g' [-Wunused-variable] int nflexcon,g,number_steps,d,Min=0,count=0; ^ ../../../src/mdlib/shellfc.c:772:10: warning: unused variable 'cbuf' [-Wunused-variable] char cbuf[56]; ^ ../../../src/mdlib/shellfc.c:771:19: warning: unused variable 'xiS' [-Wunused-variable] real ftol,xiH,xiS,dum=0; ^ ../../../src/mdlib/shellfc.c:771:15: warning: unused variable 'xiH' [-Wunused-variable] real ftol,xiH,xiS,dum=0; ^ ../../../src/mdlib/shellfc.c:769:10: warning: unused variable 'dx' [-Wunused-variable] rvec dx; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/shellfc.c:43: ../../../src/mdlib/shellfc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/shellfc.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/shellfc.c:45: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/shellfc.c:55:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o stat.lo ../../../src/mdlib/stat.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tables.lo ../../../src/mdlib/tables.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tgroup.lo ../../../src/mdlib/tgroup.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/stat.c -fPIC -DPIC -o .libs/stat.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/tables.c -fPIC -DPIC -o .libs/tables.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o update.lo ../../../src/mdlib/update.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/tgroup.c -fPIC -DPIC -o .libs/tgroup.o ../../../src/mdlib/tgroup.c: In function 'init_grptcstat': ../../../src/mdlib/tgroup.c:57:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/tgroup.c:48: ../../../src/mdlib/tgroup.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/tgroup.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/tgroup.c:51: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/tgroup.c:141:13: warning: 'accumulate_ekin' defined but not used [-Wunused-function] static void accumulate_ekin(t_commrec *cr,t_grpopts *opts, ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/update.c -fPIC -DPIC -o .libs/update.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/stat.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/stat.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/stat.c:53:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/stat.c:63: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/mdlib/tables.c: In function 'done_tabledata': ../../../src/mdlib/tables.c:470:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/mdlib/tables.c: In function 'make_tables': ../../../src/mdlib/tables.c:835:17: warning: unused variable 'j' [-Wunused-variable] int i,j,k,nx,nx0,tabsel[etiNR]; ^ ../../../src/mdlib/tables.c: In function 'make_bonded_table': ../../../src/mdlib/tables.c:950:10: warning: variable 'start' set but not used [-Wunused-but-set-variable] double start; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/tables.c:47: ../../../src/mdlib/tables.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/tables.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/tables.c:51:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/tables.c:155:13: warning: 'splint' defined but not used [-Wunused-function] static void splint(real xa[],real ya[],real y2a[], ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vcm.lo ../../../src/mdlib/vcm.c ../../../src/mdlib/update.c: In function 'update': ../../../src/mdlib/update.c:771:39: warning: unused variable 'g' [-Wunused-variable] int start,homenr,i,n,m,g; ^ ../../../src/mdlib/update.c:770:20: warning: variable 'dt_1' set but not used [-Wunused-but-set-variable] real dt_1; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/update.c:50: ../../../src/mdlib/update.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/update.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/update.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/update.c:62:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vsite.lo ../../../src/mdlib/vsite.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/vcm.c -fPIC -DPIC -o .libs/vcm.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wall.lo ../../../src/mdlib/wall.c ../../../src/mdlib/vcm.c: In function 'calc_vcm_grp': ../../../src/mdlib/vcm.c:122:28: warning: unused variable 'zz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:25: warning: unused variable 'yz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:22: warning: unused variable 'yy' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:19: warning: unused variable 'xz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:16: warning: unused variable 'xy' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:13: warning: unused variable 'xx' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c: In function 'do_stopcm_grp': ../../../src/mdlib/vcm.c:171:11: warning: unused variable 'tm_1' [-Wunused-variable] real tm,tm_1; ^ ../../../src/mdlib/vcm.c:171:8: warning: unused variable 'tm' [-Wunused-variable] real tm,tm_1; ^ ../../../src/mdlib/vcm.c:170:12: warning: unused variable 'm' [-Wunused-variable] int i,g,m; ^ ../../../src/mdlib/vcm.c: In function 'check_cm_grp': ../../../src/mdlib/vcm.c:250:14: warning: unused variable 'Tcm' [-Wunused-variable] tensor Icm,Tcm; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/vsite.c -fPIC -DPIC -o .libs/vsite.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/vcm.c:43: ../../../src/mdlib/vcm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/vcm.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/wall.c -fPIC -DPIC -o .libs/wall.o ../../../src/mdlib/vsite.c: In function 'constr_vsiten': ../../../src/mdlib/vsite.c:437:8: warning: unused variable 'xs' [-Wunused-variable] rvec xs,x1,dx; ^ ../../../src/mdlib/vsite.c: In function 'construct_vsites': ../../../src/mdlib/vsite.c:484:25: warning: unused variable 'rtmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:484:20: warning: unused variable 'vtmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:484:13: warning: unused variable 'reftmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:478:19: warning: unused variable 'ii' [-Wunused-variable] int i,inc,ii,nra,nr,tp,ftype; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite2': ../../../src/mdlib/vsite.c:655:11: warning: unused variable 'b' [-Wunused-variable] real b; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite3FD': ../../../src/mdlib/vsite.c:770:23: warning: unused variable 'd' [-Wunused-variable] int svi,sji,skj,d; ^ ../../../src/mdlib/vsite.c:767:14: warning: unused variable 'fz' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c:767:11: warning: unused variable 'fy' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c:767:8: warning: unused variable 'fx' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite_f': ../../../src/mdlib/vsite.c:1255:19: warning: unused variable 'm' [-Wunused-variable] int i,inc,m,nra,nr,tp,ftype; ^ ../../../src/mdlib/vsite.c: In function 'count_intercg_vsite': ../../../src/mdlib/vsite.c:1409:11: warning: unused variable 'mt' [-Wunused-variable] int mb,mt,ftype,nral,i,cg,a; ^ ../../../src/mdlib/vsite.c: In function 'get_vsite_pbc': ../../../src/mdlib/vsite.c:1448:38: warning: unused variable 'cg_c' [-Wunused-variable] int ftype,nral,i,j,vsi,vsite,cg_v,cg_c,a,nc3=0; ^ ../../../src/mdlib/vsite.c: In function 'init_vsite': ../../../src/mdlib/vsite.c:1559:13: warning: unused variable 'cg' [-Wunused-variable] int *a2cg,cg; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/vsite.c:46: ../../../src/mdlib/vsite.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/vsite.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/wall.c: In function 'do_walls': ../../../src/mdlib/wall.c:107:47: warning: unused variable 'Heps' [-Wunused-variable] real tabscale,*VFtab,rt,eps,eps2,Yt,Ft,Geps,Heps,Heps2,Fp,VV,FF; ^ ../../../src/mdlib/wall.c:103:50: warning: variable 'Fwall' set but not used [-Wunused-but-set-variable] real *nbfp,lamfac,fac_d[2],fac_r[2],Cd,Cr,Vtot,Fwall[2]; ^ In file included from ../../../src/mdlib/wall.c:45:0: ../../../src/mdlib/wall.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/wall.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/wall.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wnblist.lo ../../../src/mdlib/wnblist.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o csettle.lo ../../../src/mdlib/csettle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/wnblist.c -fPIC -DPIC -o .libs/wnblist.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o clincs.lo ../../../src/mdlib/clincs.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/csettle.c -fPIC -DPIC -o .libs/csettle.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/clincs.c -fPIC -DPIC -o .libs/clincs.o ../../../src/mdlib/wnblist.c: In function 'read_nblist': ../../../src/mdlib/wnblist.c:135:27: warning: unused variable 'icmp' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:135:22: warning: unused variable 'full' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:135:17: warning: unused variable 'nnbl' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:134:26: warning: unused variable 'b2' [-Wunused-variable] char buf[256],b1[32],b2[32],solv[256],il_code[256]; ^ ../../../src/mdlib/wnblist.c:134:19: warning: unused variable 'b1' [-Wunused-variable] char buf[256],b1[32],b2[32],solv[256],il_code[256]; ^ ../../../src/mdlib/wnblist.c:133:10: warning: unused variable 'bNL' [-Wunused-variable] bool bNL; ^ In file included from ../../../src/mdlib/wnblist.c:44:0: ../../../src/mdlib/wnblist.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/csettle.c: In function 'xshake': ../../../src/mdlib/csettle.c:183:39: warning: unused variable 'conv' [-Wunused-variable] int i,ll,ii,jj,l3,ix,iy,iz,jx,jy,jz,conv; ^ ../../../src/mdlib/csettle.c: In function 'csettle': ../../../src/mdlib/csettle.c:298:10: warning: unused variable 'shakeret' [-Wunused-variable] int i, shakeret, ow1, hw2, hw3; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/csettle.c:42: ../../../src/mdlib/csettle.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/csettle.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o qmmm.lo ../../../src/mdlib/qmmm.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/qmmm.c -fPIC -DPIC -o .libs/qmmm.o ../../../src/mdlib/qmmm.c: In function 'update_QMMMrec': ../../../src/mdlib/qmmm.c:725:6: warning: unused variable 'MMatoms' [-Wunused-variable] *MMatoms; ^ ../../../src/mdlib/qmmm.c:721:17: warning: variable 'QMMMlist_lr' set but not used [-Wunused-but-set-variable] QMMMlist_sr,QMMMlist_lr; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/qmmm.c:48: ../../../src/mdlib/qmmm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/qmmm.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/qmmm.c:49:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/qmmm.c:60:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/qmmm.c:131:12: warning: 'int_comp' defined but not used [-Wunused-function] static int int_comp(const void *a,const void *b){ ^ ../../../src/mdlib/clincs.c: In function 'do_lincsp': ../../../src/mdlib/clincs.c:189:54: warning: unused variable 'lam' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:49: warning: unused variable 'wfac' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:45: warning: unused variable 'len' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:40: warning: unused variable 'rlen' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c: In function 'set_lincs': ../../../src/mdlib/clincs.c:764:14: warning: variable 'bLocal' set but not used [-Wunused-but-set-variable] bool bLocal; ^ ../../../src/mdlib/clincs.c: In function 'constrain_lincs': ../../../src/mdlib/clincs.c:1084:25: warning: unused variable 'error' [-Wunused-variable] int i,warn,p_imax,error; ^ In file included from ../../../src/mdlib/clincs.c:45:0: ../../../src/mdlib/clincs.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/clincs.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/clincs.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/clincs.c:50: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/clincs.c:1034:13: warning: 'dump_conf' defined but not used [-Wunused-function] static void dump_conf(gmx_domdec_t *dd,struct gmx_lincsdata *li, ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fft.lo ../../../src/mdlib/gmx_fft.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_parallel_3dfft.lo ../../../src/mdlib/gmx_parallel_3dfft.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_fft.c -fPIC -DPIC -o .libs/gmx_fft.o In file included from ../../../src/mdlib/gmx_fft.c:30:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_parallel_3dfft.c -fPIC -DPIC -o .libs/gmx_parallel_3dfft.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wallcycle.lo ../../../src/mdlib/gmx_wallcycle.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o qm_gaussian.lo ../../../src/mdlib/qm_gaussian.c ../../../src/mdlib/gmx_parallel_3dfft.c: In function 'gmx_parallel_3dfft': ../../../src/mdlib/gmx_parallel_3dfft.c:283:22: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/mdlib/gmx_parallel_3dfft.c: In function 'gmx_parallel_3dfft_complex2real': ../../../src/mdlib/gmx_parallel_3dfft.c:484:18: warning: variable 'cdata' set but not used [-Wunused-but-set-variable] t_complex * cdata; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:483:18: warning: variable 'work' set but not used [-Wunused-but-set-variable] t_complex * work; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:480:24: warning: variable 'nzc' set but not used [-Wunused-but-set-variable] int nx,ny,nzc; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:480:21: warning: variable 'ny' set but not used [-Wunused-but-set-variable] int nx,ny,nzc; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:480:18: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int nx,ny,nzc; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:479:22: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:479:20: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:479:18: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ In file included from ../../../include/gmx_parallel_3dfft.h:30:0, from ../../../src/mdlib/gmx_parallel_3dfft.c:32: ../../../src/mdlib/gmx_parallel_3dfft.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fft_fftw3.lo ../../../src/mdlib/gmx_fft_fftw3.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_wallcycle.c -fPIC -DPIC -o .libs/gmx_wallcycle.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/qm_gaussian.c -fPIC -DPIC -o .libs/qm_gaussian.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_fft_fftw3.c -fPIC -DPIC -o .libs/gmx_fft_fftw3.o ../../../src/mdlib/qm_gaussian.c: In function 'init_gaussian': ../../../src/mdlib/qm_gaussian.c:73:6: warning: unused variable 'rffile' [-Wunused-variable] *rffile=NULL,*out=NULL; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/qm_gaussian.c:48: ../../../src/mdlib/qm_gaussian.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/qm_gaussian.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/qm_gaussian.c:49:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/qm_gaussian.c:60:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/mdlib/gmx_fft_fftw3.c:27: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libmd_mpi.la -rpath /usr/lib64 calcmu.lo calcvir.lo constr.lo coupling.lo domdec.lo domdec_con.lo domdec_network.lo domdec_setup.lo domdec_top.lo ebin.lo edsam.lo ewald.lo fftgrid.lo force.lo ghat.lo init.lo mdatom.lo mdebin.lo minimize.lo mvxvf.lo ns.lo nsgrid.lo perf_est.lo pme.lo pme_pp.lo pppm.lo partdec.lo pull.lo pullutil.lo rf_util.lo shakef.lo sim_util.lo shellfc.lo stat.lo tables.lo tgroup.lo update.lo vcm.lo vsite.lo wall.lo wnblist.lo csettle.lo clincs.lo qmmm.lo gmx_fft.lo gmx_parallel_3dfft.lo gmx_wallcycle.lo qm_gaussian.lo gmx_fft_fftw3.lo ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath mpicc -shared .libs/calcmu.o .libs/calcvir.o .libs/constr.o .libs/coupling.o .libs/domdec.o .libs/domdec_con.o .libs/domdec_network.o .libs/domdec_setup.o .libs/domdec_top.o .libs/ebin.o .libs/edsam.o .libs/ewald.o .libs/fftgrid.o .libs/force.o .libs/ghat.o .libs/init.o .libs/mdatom.o .libs/mdebin.o .libs/minimize.o .libs/mvxvf.o .libs/ns.o .libs/nsgrid.o .libs/perf_est.o .libs/pme.o .libs/pme_pp.o .libs/pppm.o .libs/partdec.o .libs/pull.o .libs/pullutil.o .libs/rf_util.o .libs/shakef.o .libs/sim_util.o .libs/shellfc.o .libs/stat.o .libs/tables.o .libs/tgroup.o .libs/update.o .libs/vcm.o .libs/vsite.o .libs/wall.o .libs/wnblist.o .libs/csettle.o .libs/clincs.o .libs/qmmm.o .libs/gmx_fft.o .libs/gmx_parallel_3dfft.o .libs/gmx_wallcycle.o .libs/qm_gaussian.o .libs/gmx_fft_fftw3.o -lgslcblas ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libmd_mpi.so.5 -o .libs/libmd_mpi.so.5.0.0 (cd .libs && rm -f libmd_mpi.so.5 && ln -s libmd_mpi.so.5.0.0 libmd_mpi.so.5) (cd .libs && rm -f libmd_mpi.so && ln -s libmd_mpi.so.5.0.0 libmd_mpi.so) creating libmd_mpi.la (cd .libs && rm -f libmd_mpi.la && ln -s ../libmd_mpi.la libmd_mpi.la) make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib' Making all in kernel make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/kernel' /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o add_par.lo ../../../src/kernel/add_par.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o compute_io.lo ../../../src/kernel/compute_io.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o convparm.lo ../../../src/kernel/convparm.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gen_ad.lo ../../../src/kernel/gen_ad.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gen_vsite.lo ../../../src/kernel/gen_vsite.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genhydro.lo ../../../src/kernel/genhydro.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxcpp.lo ../../../src/kernel/gmxcpp.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gpp_atomtype.lo ../../../src/kernel/gpp_atomtype.c mkdir .libs mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/compute_io.c -fPIC -DPIC -o .libs/compute_io.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/add_par.c -fPIC -DPIC -o .libs/add_par.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gen_vsite.c -fPIC -DPIC -o .libs/gen_vsite.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/convparm.c -fPIC -DPIC -o .libs/convparm.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/genhydro.c -fPIC -DPIC -o .libs/genhydro.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gmxcpp.c -fPIC -DPIC -o .libs/gmxcpp.o In file included from ../../../src/kernel/add_par.c:44:0: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/add_par.c:46: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/compute_io.c: In function 'compute_io': ../../../src/kernel/compute_io.c:49:53: warning: unused variable 'nfep' [-Wunused-variable] int nstx=0,nstv=0,nstf=0,nste=0,nstlog=0,nstxtc=0,nfep=0; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gen_ad.c -fPIC -DPIC -o .libs/gen_ad.o ../../../src/kernel/convparm.c: In function 'new_interaction_list': ../../../src/kernel/convparm.c:404:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/convparm.c: In function 'convert_params': ../../../src/kernel/convparm.c:414:12: warning: unused variable 'j' [-Wunused-variable] int i,j,maxtypes,mt; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/convparm.c:44: ../../../src/kernel/convparm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/convparm.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/convparm.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/convparm.c:48: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/convparm.c:48: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/convparm.c:402:13: warning: 'new_interaction_list' defined but not used [-Wunused-function] static void new_interaction_list(t_ilist *ilist) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gpp_atomtype.c -fPIC -DPIC -o .libs/gpp_atomtype.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gpp_bond_atomtype.lo ../../../src/kernel/gpp_bond_atomtype.c ../../../src/kernel/gen_vsite.c: In function 'read_vsite_database': ../../../src/kernel/gen_vsite.c:150:34: warning: unused variable 'prevdir' [-Wunused-variable] int i,j,n,k,nvsite,ntop,curdir,prevdir; ^ ../../../src/kernel/gen_vsite.c:150:9: warning: unused variable 'j' [-Wunused-variable] int i,j,n,k,nvsite,ntop,curdir,prevdir; ^ ../../../src/kernel/gen_vsite.c: In function 'add_vsites': ../../../src/kernel/gen_vsite.c:477:33: warning: unused variable 'bb' [-Wunused-variable] int i,j,ftype,other,moreheavy,bb; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_6ring': ../../../src/kernel/gen_vsite.c:560:32: warning: variable 'yCE2' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:27: warning: variable 'xCE2' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:22: warning: variable 'yCE1' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:17: warning: variable 'xCE1' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:13: warning: variable 'yCG' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c: In function 'calc_vsite3_param': ../../../src/kernel/gen_vsite.c:693:13: warning: variable 'b_ik' set but not used [-Wunused-but-set-variable] real b_ij,b_ik; ^ ../../../src/kernel/gen_vsite.c:693:8: warning: variable 'b_ij' set but not used [-Wunused-but-set-variable] real b_ij,b_ik; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_trp': ../../../src/kernel/gen_vsite.c:741:12: warning: unused variable 'c' [-Wunused-variable] real a,b,c[MAXFORCEPARAM]; ^ ../../../src/kernel/gen_vsite.c:740:14: warning: unused variable 'mtot' [-Wunused-variable] real mwtot,mtot,mM[NMASS],dCBM1,dCBM2,dM1M2; ^ ../../../src/kernel/gen_vsite.c:740:8: warning: unused variable 'mwtot' [-Wunused-variable] real mwtot,mtot,mM[NMASS],dCBM1,dCBM2,dM1M2; ^ ../../../src/kernel/gen_vsite.c:738:8: warning: unused variable 'xM' [-Wunused-variable] real xM[NMASS]; ^ ../../../src/kernel/gen_vsite.c:735:8: warning: variable 'a_CB_CG_CD1' set but not used [-Wunused-but-set-variable] real a_CB_CG_CD1,a_CD2_CG_CD1,a_CE2_CZ2_HZ2,a_CZ2_CH2_HH2; ^ ../../../src/kernel/gen_vsite.c:729:20: warning: unused variable 'dist' [-Wunused-variable] real lineA,lineB,dist; ^ ../../../src/kernel/gen_vsite.c:729:14: warning: variable 'lineB' set but not used [-Wunused-but-set-variable] real lineA,lineB,dist; ^ ../../../src/kernel/gen_vsite.c:728:32: warning: unused variable 'I' [-Wunused-variable] real xcom[NMASS],ycom[NMASS],I,alpha; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_tyr': ../../../src/kernel/gen_vsite.c:968:8: warning: unused variable 'vmass' [-Wunused-variable] real vmass,vdist,mM; ^ ../../../src/kernel/gmxcpp.c: In function 'cpp_close_file': ../../../src/kernel/gmxcpp.c:453:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/gen_vsite.c: In function 'do_vsites': ../../../src/kernel/gen_vsite.c:1332:29: warning: unused variable 'bb' [-Wunused-variable] int Hatoms[4],heavies[4],bb; ^ In file included from ../../../src/kernel/gen_vsite.h:41:0, from ../../../src/kernel/gen_vsite.c:44: ../../../src/kernel/gen_vsite.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/gen_vsite.h:43, from ../../../src/kernel/gen_vsite.c:44: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gen_vsite.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gen_vsite.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o h_db.lo ../../../src/kernel/h_db.c ../../../src/kernel/gen_ad.c: In function 'get_impropers': ../../../src/kernel/gen_ad.c:437:25: warning: unused variable 'r' [-Wunused-variable] int nidih,i,j,k,r,start,ninc,nalloc; ^ ../../../src/kernel/gen_ad.c:436:15: warning: unused variable 'hbidih' [-Wunused-variable] t_rbonded *hbidih; ^ ../../../src/kernel/gen_ad.c:434:14: warning: unused variable 'a0' [-Wunused-variable] char *a0; ^ ../../../src/kernel/gen_ad.c: In function 'clean_excls': ../../../src/kernel/gen_ad.c:576:26: warning: unused variable 'n' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e; ^ ../../../src/kernel/gen_ad.c:576:24: warning: unused variable 'm' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e; ^ ../../../src/kernel/gen_ad.c: In function 'generate_excls': ../../../src/kernel/gen_ad.c:618:28: warning: unused variable 'e' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:24: warning: unused variable 'm' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:21: warning: unused variable 'l1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:19: warning: unused variable 'l' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:16: warning: unused variable 'k1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:14: warning: unused variable 'k' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:11: warning: unused variable 'j1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hackblock.lo ../../../src/kernel/hackblock.c In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gen_ad.c:48: ../../../src/kernel/gen_ad.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gen_ad.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/gen_ad.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/gen_ad.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/gen_ad.c:51: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/gen_ad.c:57: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/gen_ad.c:114:13: warning: 'aeq' defined but not used [-Wunused-function] static bool aeq(t_param *p1, t_param *p2) ^ ../../../src/kernel/gen_ad.c:289:13: warning: 'ideq' defined but not used [-Wunused-function] static bool ideq(t_param *p1, t_param *p2) ^ ../../../src/kernel/gen_ad.c:327:13: warning: 'dump_param' defined but not used [-Wunused-function] static void dump_param(FILE *fp,char *title,int n,t_param ps[]) ^ In file included from ../../../src/kernel/topdirs.h:40:0, from ../../../src/kernel/gpp_atomtype.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gpp_bond_atomtype.c -fPIC -DPIC -o .libs/gpp_bond_atomtype.o In file included from ../../../src/kernel/genhydro.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/genhydro.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/genhydro.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/genhydro.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/genhydro.h:40:0, from ../../../src/kernel/genhydro.c:56: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/genhydro.h:41, from ../../../src/kernel/genhydro.c:56: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/hackblock.c -fPIC -DPIC -o .libs/hackblock.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/h_db.c -fPIC -DPIC -o .libs/h_db.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hizzie.lo ../../../src/kernel/hizzie.c ../../../src/kernel/h_db.c: In function 'dump_h_db': ../../../src/kernel/h_db.c:113:10: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/h_db.h:41, from ../../../src/kernel/h_db.c:47: ../../../src/kernel/h_db.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/h_db.h:41, from ../../../src/kernel/h_db.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/hackblock.c:42: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/hackblock.c:42: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/hackblock.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/hackblock.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdb2top.lo ../../../src/kernel/pdb2top.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pgutil.lo ../../../src/kernel/pgutil.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/hizzie.c -fPIC -DPIC -o .libs/hizzie.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/pdb2top.c -fPIC -DPIC -o .libs/pdb2top.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readir.lo ../../../src/kernel/readir.c ../../../src/kernel/hizzie.c: In function 'set_histp': ../../../src/kernel/hizzie.c:195:8: warning: unused variable 'd' [-Wunused-variable] real d; ^ ../../../src/kernel/hizzie.c:192:27: warning: unused variable 'his0' [-Wunused-variable] int i,j,nd,na,aj,hisnr,his0,type=-1; ^ ../../../src/kernel/hizzie.c:192:18: warning: unused variable 'aj' [-Wunused-variable] int i,j,nd,na,aj,hisnr,his0,type=-1; ^ ../../../src/kernel/hizzie.c:188:15: warning: unused variable 'bHaveH' [-Wunused-variable] bool *hbond,bHaveH=FALSE; ^ In file included from ../../../src/kernel/hizzie.c:44:0: ../../../src/kernel/hizzie.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/hizzie.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/hizzie.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/hizzie.c:48: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/pgutil.c -fPIC -DPIC -o .libs/pgutil.o ../../../src/kernel/pdb2top.c: In function 'missing_atoms': ../../../src/kernel/pdb2top.c:75:16: warning: unused variable 'bRet' [-Wunused-variable] bool bFound, bRet; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/pdb2top.c:43: ../../../src/kernel/pdb2top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/pdb2top.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/pdb2top.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/kernel/pdb2top.h:41:0, from ../../../src/kernel/pdb2top.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/pdb2top.c:50: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/pdb2top.c:57: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/pdb2top.c:57: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/readir.c -fPIC -DPIC -o .libs/readir.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readpull.lo ../../../src/kernel/readpull.c ../../../src/kernel/readir.c: In function 'do_index': ../../../src/kernel/readir.c:1427:38: warning: variable 'nbTS' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:32: warning: variable 'nbOPT' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:18: warning: variable 'nSAsteps' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:11: warning: variable 'nSAoff' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:5: warning: variable 'nSAon' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1426:61: warning: variable 'nCASelec' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:53: warning: variable 'nCASorb' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:48: warning: variable 'nbSH' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:40: warning: variable 'nQMmult' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:30: warning: variable 'nQMcharge' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1424:11: warning: unused variable 'SAtime' [-Wunused-variable] real SAtime; ^ ../../../src/kernel/readir.c: In function 'triple_check': ../../../src/kernel/readir.c:1872:17: warning: unused variable 'npct' [-Wunused-variable] int i,m,nmol,npct; ^ In file included from ../../../src/kernel/readir.c:53:0: ../../../src/kernel/readir.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/readir.c:54: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/readir.c:58: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/readir.c:58:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o resall.lo ../../../src/kernel/resall.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorting.lo ../../../src/kernel/sorting.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o specbond.lo ../../../src/kernel/specbond.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/readpull.c -fPIC -DPIC -o .libs/readpull.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/sorting.c -fPIC -DPIC -o .libs/sorting.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/resall.c -fPIC -DPIC -o .libs/resall.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/specbond.c -fPIC -DPIC -o .libs/specbond.o In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/resall.c:49: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/resall.c:49: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ter_db.lo ../../../src/kernel/ter_db.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tomorse.lo ../../../src/kernel/tomorse.c In file included from ../../../src/kernel/specbond.c:43:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/pdb2top.h:41:0, from ../../../src/kernel/specbond.h:40, from ../../../src/kernel/specbond.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/specbond.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/specbond.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/readpull.c: In function 'read_pullparams': ../../../src/kernel/readpull.c:102:22: warning: unused variable 'nchar' [-Wunused-variable] int ninp,nerror,i,nchar,ndim,nscan,m; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/ter_db.c -fPIC -DPIC -o .libs/ter_db.o In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/readpull.c:45: ../../../src/kernel/readpull.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/readpull.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/readpull.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/readpull.c:54: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readpull.c:54:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topdirs.lo ../../../src/kernel/topdirs.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topexcl.lo ../../../src/kernel/topexcl.c ../../../src/kernel/ter_db.c: In function 'print_ter_db': ../../../src/kernel/ter_db.c:105:20: warning: unused variable 'nname' [-Wunused-variable] char buf[STRLEN],nname[STRLEN]; ^ ../../../src/kernel/ter_db.c: In function 'filter_ter': ../../../src/kernel/ter_db.c:301:12: warning: unused variable 's2' [-Wunused-variable] char *s,*s2,*c; ^ ../../../src/kernel/ter_db.c:299:13: warning: unused variable 'len' [-Wunused-variable] int i,j,n,len,none_idx; ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/ter_db.c:45: ../../../src/kernel/ter_db.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/ter_db.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topio.lo ../../../src/kernel/topio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/tomorse.c -fPIC -DPIC -o .libs/tomorse.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topexcl.c -fPIC -DPIC -o .libs/topexcl.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topdirs.c -fPIC -DPIC -o .libs/topdirs.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topio.c -fPIC -DPIC -o .libs/topio.o In file included from ../../../include/gpp_nextnb.h:40:0, from ../../../src/kernel/topexcl.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/tomorse.c:46:0: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o toppush.lo ../../../src/kernel/toppush.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topshake.lo ../../../src/kernel/topshake.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o toputil.lo ../../../src/kernel/toputil.c ../../../src/kernel/topio.c: In function 'read_topol': ../../../src/kernel/topio.c:314:15: warning: unused variable 'block' [-Wunused-variable] t_topology *block=NULL; ^ In file included from ../../../src/kernel/vsite_parm.h:41:0, from ../../../src/kernel/topio.c:59: ../../../src/kernel/topio.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/topio.c:66: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/topio.c:66: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/toppush.c -fPIC -DPIC -o .libs/toppush.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpbcmp.lo ../../../src/kernel/tpbcmp.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vsite_parm.lo ../../../src/kernel/vsite_parm.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topshake.c -fPIC -DPIC -o .libs/topshake.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xlate.lo ../../../src/kernel/xlate.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/toputil.c -fPIC -DPIC -o .libs/toputil.o ../../../src/kernel/toppush.c: In function 'push_bt': ../../../src/kernel/toppush.c:573:37: warning: variable 'nrfpB' set but not used [-Wunused-but-set-variable] int i,ft,ftype,nn,nrfp,nrfpA,nrfpB; ^ ../../../src/kernel/toppush.c: In function 'push_dihedraltype': ../../../src/kernel/toppush.c:661:37: warning: variable 'nrfpB' set but not used [-Wunused-but-set-variable] int i,ft,ftype,nn,nrfp,nrfpA,nrfpB,nral; ^ ../../../src/kernel/toppush.c: In function 'push_nbt': ../../../src/kernel/toppush.c:778:17: warning: unused variable 'sig6' [-Wunused-variable] real cr[4],sig6; ^ ../../../src/kernel/toppush.c:776:23: warning: unused variable 'atnr' [-Wunused-variable] int i,f,n,ftype,atnr,nrfp; ^ ../../../src/kernel/toppush.c: In function 'push_atom_now': ../../../src/kernel/toppush.c:871:7: warning: unused variable 'j' [-Wunused-variable] int j,resnr_diff=-1; ^ ../../../src/kernel/toppush.c: In function 'push_bond': ../../../src/kernel/toppush.c:1234:18: warning: unused variable 'paramB' [-Wunused-variable] t_param param,paramB,*param_defA,*param_defB; ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.c:48: ../../../src/kernel/toppush.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/toppush.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/toppush.c:51:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/topshake.c: In function 'make_shake': ../../../src/kernel/topshake.c:98:19: warning: unused variable 'b' [-Wunused-variable] int nb,b,i,j,ftype,ftype_a; ^ ../../../src/kernel/topshake.c:98:16: warning: unused variable 'nb' [-Wunused-variable] int nb,b,i,j,ftype,ftype_a; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topshake.c:46: ../../../src/kernel/topshake.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/topshake.c:46: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/topshake.c:46:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/tpbcmp.c -fPIC -DPIC -o .libs/tpbcmp.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/vsite_parm.c -fPIC -DPIC -o .libs/vsite_parm.o In file included from ../../../src/kernel/topdirs.h:40:0, from ../../../src/kernel/toputil.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/toputil.c:135:13: warning: 'print_nbt' defined but not used [-Wunused-function] static void print_nbt (FILE *out,char *title,t_atomtype at, ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/xlate.c -fPIC -DPIC -o .libs/xlate.o ../../../src/kernel/tpbcmp.c: In function 'cmp_block': ../../../src/kernel/tpbcmp.c:242:11: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:242:9: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:242:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_blocka': ../../../src/kernel/tpbcmp.c:252:11: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:252:9: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:252:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_atom': ../../../src/kernel/tpbcmp.c:265:8: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ ../../../src/kernel/tpbcmp.c:264:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_top': ../../../src/kernel/tpbcmp.c:302:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/tpbcmp.c: In function 'comp_tpx': ../../../src/kernel/tpbcmp.c:567:15: warning: unused variable 'sh' [-Wunused-variable] t_tpxheader sh[2]; ^ ../../../src/kernel/tpbcmp.c: In function 'comp_enx': ../../../src/kernel/tpbcmp.c:723:38: warning: unused variable 'buf' [-Wunused-variable] char **enm1=NULL,**enm2=NULL,buf[256]; ^ ../../../src/kernel/tpbcmp.c:721:36: warning: unused variable 'block' [-Wunused-variable] int in1,in2,nre,nre1,nre2,block; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/tpbcmp.c:48: ../../../src/kernel/tpbcmp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/tpbcmp.c:77:13: warning: 'cmp_uc' defined but not used [-Wunused-function] static void cmp_uc(FILE *fp,char *s,int index,unsigned char i1,unsigned char i2) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o grompp.o ../../../src/kernel/grompp.c ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_bonds': ../../../src/kernel/vsite_parm.c:862:62: warning: unused variable 'vsitetype' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:862:30: warning: unused variable 'l' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:862:22: warning: unused variable 'parnr' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_angles': ../../../src/kernel/vsite_parm.c:1035:51: warning: unused variable 'vsitetype' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:1035:24: warning: unused variable 'l' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:1035:16: warning: unused variable 'parnr' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_dihs': ../../../src/kernel/vsite_parm.c:1130:28: warning: unused variable 'l' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ ../../../src/kernel/vsite_parm.c:1130:20: warning: unused variable 'parnr' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ ../../../src/kernel/vsite_parm.c:1130:12: warning: unused variable 'ftype' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ In file included from ../../../src/kernel/vsite_parm.h:41:0, from ../../../src/kernel/vsite_parm.c:43: ../../../src/kernel/vsite_parm.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/vsite_parm.c:45: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/vsite_parm.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/vsite_parm.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o glaasje.o ../../../src/kernel/glaasje.c ../../../src/kernel/grompp.c: In function 'new_status': ../../../src/kernel/grompp.c:300:3: warning: statement with no effect [-Wunused-value] mbs; ^ ../../../src/kernel/grompp.c: In function 'read_posres': ../../../src/kernel/grompp.c:478:10: warning: unused variable 'bFirst' [-Wunused-variable] bool bFirst = TRUE; ^ ../../../src/kernel/grompp.c: In function 'gen_posres': ../../../src/kernel/grompp.c:604:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/kernel/grompp.c:604:7: warning: unused variable 'i' [-Wunused-variable] int i,j; ^ ../../../src/kernel/grompp.c: In function 'main': ../../../src/kernel/grompp.c:769:16: warning: unused variable 'natoms' [-Wunused-variable] int natoms,nvsite,comb,mt; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/grompp.c:50: ../../../src/kernel/grompp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/grompp.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/grompp.c:50:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/grompp.c:54:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/grompp.c:60: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/grompp.c:60:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/add_par.h:41, from ../../../src/kernel/grompp.c:74: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/glaasje.c: In function 'do_glas': ../../../src/kernel/glaasje.c:55:40: warning: unused variable 'r3' [-Wunused-variable] real wd,wdd,zi,fz,dd,d10,d4,d9,d3,r9,r3,sign,cc6,cc12; ^ ../../../src/kernel/glaasje.c:55:37: warning: unused variable 'r9' [-Wunused-variable] real wd,wdd,zi,fz,dd,d10,d4,d9,d3,r9,r3,sign,cc6,cc12; ^ In file included from ../../../src/kernel/glaasje.c:44:0: ../../../src/kernel/glaasje.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gctio.o ../../../src/kernel/gctio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ionize.o ../../../src/kernel/ionize.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_gct.o ../../../src/kernel/do_gct.c In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/gctio.c:41: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/kernel/gctio.c:49:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/ionize.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/ionize.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/do_gct.c: In function 'init_coupling': ../../../src/kernel/do_gct.c:63:19: warning: unused variable 'atj' [-Wunused-variable] int ati,atj; ^ ../../../src/kernel/do_gct.c:63:15: warning: unused variable 'ati' [-Wunused-variable] int ati,atj; ^ ../../../src/kernel/do_gct.c:62:26: warning: unused variable 'j' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:20: warning: unused variable 'index' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:17: warning: unused variable 'nc' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:15: warning: unused variable 'i' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c: In function 'do_coupling': ../../../src/kernel/do_gct.c:489:15: warning: unused variable 'bTest' [-Wunused-variable] bool bTest,bPrint; ^ ../../../src/kernel/do_gct.c:487:59: warning: unused variable 'xi12' [-Wunused-variable] real Epol,Eintern,Virial,muabs,xiH=-1,xiS=-1,xi6,xi12; ^ ../../../src/kernel/do_gct.c:487:55: warning: unused variable 'xi6' [-Wunused-variable] real Epol,Eintern,Virial,muabs,xiH=-1,xiS=-1,xi6,xi12; ^ ../../../src/kernel/do_gct.c:486:32: warning: unused variable 'ffc' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:486:28: warning: unused variable 'ffb' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:486:24: warning: unused variable 'ffa' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:485:60: warning: unused variable 'rmsf' [-Wunused-variable] real deviation[eoObsNR],prdev[eoObsNR],epot0,dist,rmsf; ^ In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/do_gct.c:41: ../../../src/kernel/do_gct.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/kernel/do_gct.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/kernel/do_gct.c:48: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/do_gct.c:50:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/do_gct.c:457:13: warning: 'dump_fm' defined but not used [-Wunused-function] static void dump_fm(FILE *fp,int n,real f[],char *s) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o repl_ex.o ../../../src/kernel/repl_ex.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xutils.o ../../../src/kernel/xutils.c ../../../src/kernel/repl_ex.c: In function 'init_replica_exchange': ../../../src/kernel/repl_ex.c:111:8: warning: unused variable 'temp' [-Wunused-variable] real temp,pres; ^ ../../../src/kernel/repl_ex.c: In function 'replica_exchange': ../../../src/kernel/repl_ex.c:560:20: warning: unused variable 'shift' [-Wunused-variable] int exchange=-1,shift; ^ In file included from ../../../src/kernel/repl_ex.c:46:0: ../../../src/kernel/repl_ex.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/repl_ex.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/repl_ex.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/repl_ex.c:544:13: warning: 'write_debug_x' defined but not used [-Wunused-function] static void write_debug_x(t_state *state) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o md.o ../../../src/kernel/md.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdrun.o ../../../src/kernel/mdrun.c ../../../src/kernel/xutils.c: In function 'calc_mu_aver': ../../../src/kernel/xutils.c:65:19: warning: variable 'end' set but not used [-Wunused-but-set-variable] int i,start,end; ^ ../../../src/kernel/xutils.c: In function 'update_forcefield': ../../../src/kernel/xutils.c:335:10: warning: unused variable 'bDone' [-Wunused-variable] bool bDone; ^ In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/xutils.c:44: ../../../src/kernel/xutils.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/xutils.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/xutils.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genalg.o ../../../src/kernel/genalg.c ../../../src/kernel/md.c: In function 'mdrunner': ../../../src/kernel/md.c:140:15: warning: unused variable 'gro' [-Wunused-variable] char *gro; ^ ../../../src/kernel/md.c:139:45: warning: unused variable 'nalloc' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:139:16: warning: unused variable 'm' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:139:14: warning: unused variable 'i' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:128:20: warning: unused variable 'tmpr2' [-Wunused-variable] real tmpr1,tmpr2; ^ ../../../src/kernel/md.c:128:14: warning: unused variable 'tmpr1' [-Wunused-variable] real tmpr1,tmpr2; ^ ../../../src/kernel/md.c: In function 'do_md': ../../../src/kernel/md.c:533:16: warning: unused variable 'grpname' [-Wunused-variable] char *grpname; ^ ../../../src/kernel/md.c:525:15: warning: unused variable 'timestep' [-Wunused-variable] real timestep=0; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/md.c:45: ../../../src/kernel/md.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/md.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/md.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/kernel/md.c:69: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpbconv.o ../../../src/kernel/tpbconv.c ../../../src/kernel/genalg.c: In function 'update_ga': ../../../src/kernel/genalg.c:197:12: warning: unused variable 'j' [-Wunused-variable] int i, j, L, n; /* counting variables */ ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/genalg.c:75: ../../../src/kernel/genalg.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/genalg.c:75:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/mdrun.c: In function 'main': ../../../src/kernel/mdrun.c:387:20: warning: unused variable 'fptest' [-Wunused-variable] FILE *fplog,*fptest; ^ ../../../src/kernel/mdrun.c:386:12: warning: unused variable 'HaveCheckpoint' [-Wunused-variable] bool HaveCheckpoint; ^ ../../../src/kernel/mdrun.c:285:15: warning: unused variable 'bPPPME' [-Wunused-variable] static bool bPPPME = FALSE; ^ ../../../src/kernel/mdrun.c:284:15: warning: unused variable 'bCart' [-Wunused-variable] static bool bCart = FALSE; ^ In file included from ../../../src/kernel/mdrun.c:42:0: ../../../src/kernel/mdrun.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/mdrun.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/kernel/mdrun.c:49: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/kernel/mdrun.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/kernel/mdrun.c:49: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/tpbconv.c: In function 'main': ../../../src/kernel/tpbconv.c:365:7: warning: unused variable 'nerror' [-Wunused-variable] int nerror = 0; ^ ../../../src/kernel/tpbconv.c:325:17: warning: unused variable 'gopts' [-Wunused-variable] t_gromppopts *gopts; ^ ../../../src/kernel/tpbconv.c:324:21: warning: unused variable 'irnew' [-Wunused-variable] t_inputrec *ir,*irnew=NULL; ^ ../../../src/kernel/tpbconv.c:318:33: warning: unused variable 'nsteps_org' [-Wunused-variable] int i,frame,run_step,nsteps_org; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/tpbconv.c:52: ../../../src/kernel/tpbconv.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/tpbconv.c:52: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/tpbconv.c:52:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/tpbconv.c:54:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/tpbconv.c:56: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/tpbconv.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdb2gmx.o ../../../src/kernel/pdb2gmx.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o protonate.o ../../../src/kernel/protonate.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o luck.o ../../../src/kernel/luck.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxdump.o ../../../src/kernel/gmxdump.c ../../../src/kernel/gmxdump.c: In function 'list_tpx': ../../../src/kernel/gmxdump.c:146:16: warning: left-hand operand of comma expression has no effect [-Wunused-value] if (state,tpx.bF) { ^ ../../../src/kernel/gmxdump.c:99:20: warning: unused variable 'fp' [-Wunused-variable] int step,fp,indent,i,j,**gcount,atot; ^ ../../../src/kernel/gmxdump.c: In function 'list_ene': ../../../src/kernel/gmxdump.c:314:17: warning: unused variable 'ndr' [-Wunused-variable] int in,ndr; ^ In file included from ../../../src/kernel/luck.c:41:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/luck.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/gmxdump.c:46: ../../../src/kernel/gmxdump.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/gmxdump.c:47:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/kernel/gmxdump.c:65:13: warning: 'dump_top' defined but not used [-Wunused-function] static void dump_top(FILE *fp,t_topology *top,char *tpr) ^ In file included from ../../../src/kernel/pdb2gmx.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/pdb2gmx.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/pdb2gmx.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/pdb2gmx.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/pdb2gmx.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/pdb2gmx.c:55: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/pdb2gmx.c:149:20: warning: 'get_cystp' defined but not used [-Wunused-function] static const char *get_cystp(int resnr) ^ In file included from ../../../src/kernel/protonate.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/protonate.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/genhydro.h:40:0, from ../../../src/kernel/protonate.c:47: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/genhydro.h:41, from ../../../src/kernel/protonate.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/protonate.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/protonate.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxcheck.o ../../../src/kernel/gmxcheck.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o x2top.o ../../../src/kernel/x2top.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nm2type.o ../../../src/kernel/nm2type.c ../../../src/kernel/x2top.c: In function 'set_cgnr': ../../../src/kernel/x2top.c:178:15: warning: unused variable 'mt' [-Wunused-variable] double qt=0,mt=0; ^ ../../../src/kernel/x2top.c: In function 'set_force_const': ../../../src/kernel/x2top.c:255:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/x2top.c: In function 'main': ../../../src/kernel/x2top.c:419:15: warning: unused variable 'scale' [-Wunused-variable] static real scale = 1.1, kb = 4e5,kt = 400,kp = 5; ^ ../../../src/kernel/x2top.c:411:14: warning: unused variable 'cutoff' [-Wunused-variable] real cutoff,qtot,mtot; ^ ../../../src/kernel/x2top.c:408:24: warning: unused variable 'ndih' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:22: warning: unused variable 'm' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:20: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:18: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:16: warning: unused variable 'j' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:14: warning: unused variable 'i' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:407:14: warning: unused variable 'nres' [-Wunused-variable] int nres; /* number of molecules? */ ^ In file included from ../../../src/kernel/x2top.c:40:0: ../../../src/kernel/x2top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/x2top.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/x2top.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/x2top.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.h:41, from ../../../src/kernel/x2top.c:58: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/x2top.c:59: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/gen_ad.h:42, from ../../../src/kernel/x2top.c:60: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/x2top.c:80:13: warning: 'set_x_blen' defined but not used [-Wunused-function] static real set_x_blen(real scale) ^ ../../../src/kernel/x2top.c:117:12: warning: 'get_atype' defined but not used [-Wunused-function] static int get_atype(char *nm) ^ ../../../src/kernel/gmxcheck.c: In function 'tpx2system': ../../../src/kernel/gmxcheck.c:90:7: warning: unused variable 'i' [-Wunused-variable] int i,nmol,nvsite=0; ^ ../../../src/kernel/gmxcheck.c: In function 'tpx2methods': ../../../src/kernel/gmxcheck.c:140:15: warning: unused variable 'i' [-Wunused-variable] int i,step; ^ ../../../src/kernel/gmxcheck.c:136:15: warning: unused variable 'sh' [-Wunused-variable] t_tpxheader sh; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_bonds': ../../../src/kernel/gmxcheck.c:202:26: warning: variable 'devtot' set but not used [-Wunused-but-set-variable] real b0,blen,deviation,devtot; ^ ../../../src/kernel/gmxcheck.c:201:14: warning: unused variable 'i' [-Wunused-variable] int ftype,i,k,ai,aj,type; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_trj': ../../../src/kernel/gmxcheck.c:252:35: warning: unused variable 'bOK' [-Wunused-variable] bool bShowTimestep=TRUE,bOK,newline=FALSE; ^ ../../../src/kernel/gmxcheck.c:251:40: warning: unused variable 'prec' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:251:23: warning: unused variable 'tt' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:251:16: warning: unused variable 'rdum' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:250:16: warning: variable 'fpos' set but not used [-Wunused-but-set-variable] off_t fpos; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_ndx': ../../../src/kernel/gmxcheck.c:526:10: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_enx': ../../../src/kernel/gmxcheck.c:550:25: warning: unused variable 'ndr' [-Wunused-variable] int in,nre,fnr,ndr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/gmxcheck.c:47: ../../../src/kernel/gmxcheck.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/gmxcheck.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gmxcheck.c:57: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gmxcheck.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/nm2type.c: In function 'rd_nm2type': ../../../src/kernel/nm2type.c:72:20: warning: unused variable 'blen' [-Wunused-variable] double qq,mm,*blen; ^ ../../../src/kernel/nm2type.c: In function 'nm2type': ../../../src/kernel/nm2type.c:160:38: warning: unused variable 'quality' [-Wunused-variable] int *bbb,*n_mask,*m_mask,**match,**quality; ^ In file included from ../../../src/kernel/nm2type.c:42:0: ../../../src/kernel/nm2type.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/nm2type.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/nm2type.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/nm2type.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.h:41, from ../../../src/kernel/nm2type.c:58: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/nm2type.c:59: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libgmxpreprocess_mpi.la add_par.lo compute_io.lo convparm.lo gen_ad.lo gen_vsite.lo genhydro.lo gmxcpp.lo gpp_atomtype.lo gpp_bond_atomtype.lo h_db.lo hackblock.lo hizzie.lo pdb2top.lo pgutil.lo readir.lo readpull.lo resall.lo sorting.lo specbond.lo ter_db.lo tomorse.lo topdirs.lo topexcl.lo topio.lo toppush.lo topshake.lo toputil.lo tpbcmp.lo vsite_parm.lo xlate.lo -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libgmxpreprocess_mpi.a .libs/add_par.o .libs/compute_io.o .libs/convparm.o .libs/gen_ad.o .libs/gen_vsite.o .libs/genhydro.o .libs/gmxcpp.o .libs/gpp_atomtype.o .libs/gpp_bond_atomtype.o .libs/h_db.o .libs/hackblock.o .libs/hizzie.o .libs/pdb2top.o .libs/pgutil.o .libs/readir.o .libs/readpull.o .libs/resall.o .libs/sorting.o .libs/specbond.o .libs/ter_db.o .libs/tomorse.o .libs/topdirs.o .libs/topexcl.o .libs/topio.o .libs/toppush.o .libs/topshake.o .libs/toputil.o .libs/tpbcmp.o .libs/vsite_parm.o .libs/xlate.o ranlib .libs/libgmxpreprocess_mpi.a creating libgmxpreprocess_mpi.la (cd .libs && rm -f libgmxpreprocess_mpi.la && ln -s ../libgmxpreprocess_mpi.la libgmxpreprocess_mpi.la) /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o grompp grompp.o libgmxpreprocess_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o mdrun glaasje.o gctio.o ionize.o do_gct.o repl_ex.o xutils.o md.o mdrun.o genalg.o libgmxpreprocess_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o tpbconv tpbconv.o libgmxpreprocess_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o pdb2gmx pdb2gmx.o libgmxpreprocess_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o protonate protonate.o libgmxpreprocess_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o luck luck.o libgmxpreprocess_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o gmxdump gmxdump.o libgmxpreprocess_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o gmxcheck gmxcheck.o libgmxpreprocess_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/protonate protonate.o ./.libs/libgmxpreprocess_mpi.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/mdrun glaasje.o gctio.o ionize.o do_gct.o repl_ex.o xutils.o md.o mdrun.o genalg.o ./.libs/libgmxpreprocess_mpi.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/grompp grompp.o ./.libs/libgmxpreprocess_mpi.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/gmxcheck gmxcheck.o ./.libs/libgmxpreprocess_mpi.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/gmxdump gmxdump.o ./.libs/libgmxpreprocess_mpi.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/luck luck.o ./.libs/libgmxpreprocess_mpi.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating grompp DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/pdb2gmx pdb2gmx.o ./.libs/libgmxpreprocess_mpi.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/tpbconv tpbconv.o ./.libs/libgmxpreprocess_mpi.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating gmxcheck creating protonate /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o x2top x2top.o nm2type.o libgmxpreprocess_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath creating luck creating mdrun creating gmxdump creating tpbconv creating pdb2gmx DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/x2top x2top.o nm2type.o ./.libs/libgmxpreprocess_mpi.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating x2top make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/kernel' Making all in tools make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/tools' /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o autocorr.lo ../../../src/tools/autocorr.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o expfit.lo ../../../src/tools/expfit.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o polynomials.lo ../../../src/tools/polynomials.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o levenmar.lo ../../../src/tools/levenmar.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o anadih.lo ../../../src/tools/anadih.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pp2shift.lo ../../../src/tools/pp2shift.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlist.lo ../../../src/tools/dlist.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eigio.lo ../../../src/tools/eigio.c mkdir .libs mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/eigio.c -fPIC -DPIC -o .libs/eigio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/pp2shift.c -fPIC -DPIC -o .libs/pp2shift.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/dlist.c -fPIC -DPIC -o .libs/dlist.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/anadih.c -fPIC -DPIC -o .libs/anadih.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/polynomials.c -fPIC -DPIC -o .libs/polynomials.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/levenmar.c -fPIC -DPIC -o .libs/levenmar.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/expfit.c -fPIC -DPIC -o .libs/expfit.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/autocorr.c -fPIC -DPIC -o .libs/autocorr.o ../../../src/tools/levenmar.c:78:16: warning: 'dvector' defined but not used [-Wunused-function] static double *dvector(int nl, int nh) ^ ../../../src/tools/levenmar.c:106:17: warning: 'dmatrix' defined but not used [-Wunused-function] static double **dmatrix(int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:123:14: warning: 'imatrix1' defined but not used [-Wunused-function] static int **imatrix1(int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:141:15: warning: 'submatrix' defined but not used [-Wunused-function] static real **submatrix(real **a, int oldrl, int oldrh, int oldcl, ^ ../../../src/tools/levenmar.c:168:13: warning: 'free_dvector' defined but not used [-Wunused-function] static void free_dvector(int *v, int nl) ^ ../../../src/tools/levenmar.c:183:13: warning: 'free_dmatrix' defined but not used [-Wunused-function] static void free_dmatrix(double **m, int nrl, int nrh, int ncl) ^ ../../../src/tools/levenmar.c:191:13: warning: 'free_imatrix' defined but not used [-Wunused-function] static void free_imatrix(int **m, int nrl, int nrh, int ncl) ^ ../../../src/tools/levenmar.c:201:13: warning: 'free_submatrix' defined but not used [-Wunused-function] static void free_submatrix(real **b, int nrl) ^ ../../../src/tools/levenmar.c:208:15: warning: 'convert_matrix' defined but not used [-Wunused-function] static real **convert_matrix(real *a, int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:224:13: warning: 'free_convert_matrix' defined but not used [-Wunused-function] static void free_convert_matrix(real **b, int nrl) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/dlist.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/anadih.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/anadih.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/anadih.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/pp2shift.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/pp2shift.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/eigio.c:41: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/eigio.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/autocorr.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/autocorr.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/autocorr.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.h:40, from ../../../src/tools/autocorr.c:53: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/polynomials.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o lsq.lo ../../../src/tools/lsq.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o cmat.lo ../../../src/tools/cmat.c In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/expfit.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/expfit.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/expfit.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eigensolver.lo ../../../src/tools/eigensolver.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/lsq.c -fPIC -DPIC -o .libs/lsq.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nsc.lo ../../../src/tools/nsc.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/cmat.c -fPIC -DPIC -o .libs/cmat.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/eigensolver.c -fPIC -DPIC -o .libs/eigensolver.o ../../../src/tools/eigensolver.c: In function 'eigensolver': ../../../src/tools/eigensolver.c:65:16: warning: unused variable 'iu' [-Wunused-variable] int il,iu,m,iw0,info; ^ ../../../src/tools/eigensolver.c:65:13: warning: unused variable 'il' [-Wunused-variable] int il,iu,m,iw0,info; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hxprops.lo ../../../src/tools/hxprops.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fitahx.lo ../../../src/tools/fitahx.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/nsc.c -fPIC -DPIC -o .libs/nsc.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/lsq.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/lsq.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/lsq.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/nsc.c: In function 'nsc_dclm_pbc': ../../../src/tools/nsc.c:652:21: warning: unused variable 'm' [-Wunused-variable] int ix,iy,iz,m; ^ ../../../src/tools/nsc.c:551:16: warning: unused variable 'jat_xx' [-Wunused-variable] int iat_xx,jat_xx; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/nsc.c:48: ../../../src/tools/nsc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/nsc.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/hxprops.c -fPIC -DPIC -o .libs/hxprops.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/fitahx.c -fPIC -DPIC -o .libs/fitahx.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_analyze.lo ../../../src/tools/gmx_analyze.c ../../../src/tools/hxprops.c: In function 'ellipticity': ../../../src/tools/hxprops.c:85:14: warning: unused variable 'Xi' [-Wunused-variable] const real Xi=1.0; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/hxprops.c:46: ../../../src/tools/hxprops.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/hxprops.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_anaeig.lo ../../../src/tools/gmx_anaeig.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/fitahx.c:41: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/fitahx.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_analyze.c -fPIC -DPIC -o .libs/gmx_analyze.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_angle.lo ../../../src/tools/gmx_angle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_anaeig.c -fPIC -DPIC -o .libs/gmx_anaeig.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_bond.lo ../../../src/tools/gmx_bond.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_bundle.lo ../../../src/tools/gmx_bundle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_angle.c -fPIC -DPIC -o .libs/gmx_angle.o ../../../src/tools/gmx_anaeig.c: In function 'calc_entropy_schlitter': ../../../src/tools/gmx_anaeig.c:98:10: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ ../../../src/tools/gmx_anaeig.c:97:16: warning: unused variable 'm' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:97:14: warning: unused variable 'k' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:97:12: warning: unused variable 'j' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:96:11: warning: unused variable 'indx' [-Wunused-variable] int *indx; ^ ../../../src/tools/gmx_anaeig.c: In function 'compare': ../../../src/tools/gmx_anaeig.c:224:12: warning: unused variable 'nrow' [-Wunused-variable] int n,nrow; ^ ../../../src/tools/gmx_anaeig.c: In function 'rmsf': ../../../src/tools/gmx_anaeig.c:692:9: warning: unused variable 'nrow' [-Wunused-variable] int nrow,g,v,i; ^ ../../../src/tools/gmx_anaeig.c: In function 'gmx_anaeig': ../../../src/tools/gmx_anaeig.c:835:21: warning: unused variable 'step' [-Wunused-variable] int natoms,step; ^ ../../../src/tools/gmx_anaeig.c:834:42: warning: unused variable 'lambda' [-Wunused-variable] real xid,totmass,*sqrtm,*w_rls,t,lambda; ^ ../../../src/tools/gmx_anaeig.c:834:14: warning: unused variable 'xid' [-Wunused-variable] real xid,totmass,*sqrtm,*w_rls,t,lambda; ^ ../../../src/tools/gmx_anaeig.c:832:18: warning: unused variable 'xread' [-Wunused-variable] rvec *x,*xread,*xav1,*xav2,**eigvec1=NULL,**eigvec2=NULL; ^ ../../../src/tools/gmx_anaeig.c:832:15: warning: unused variable 'x' [-Wunused-variable] rvec *x,*xread,*xav1,*xav2,**eigvec1=NULL,**eigvec2=NULL; ^ ../../../src/tools/gmx_anaeig.c:825:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_anaeig.c:825:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_anaeig.c:824:15: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_anaeig.c:41: ../../../src/tools/gmx_anaeig.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_anaeig.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_anaeig.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_anaeig.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_anaeig.c:53:0: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_chi.lo ../../../src/tools/gmx_chi.c ../../../src/tools/gmx_angle.c: In function 'gmx_angle': ../../../src/tools/gmx_angle.c:147:14: warning: unused variable 'buf' [-Wunused-variable] char buf[80]; ^ ../../../src/tools/gmx_angle.c:143:38: warning: unused variable 'fraction' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:143:16: warning: unused variable 'aa' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:143:14: warning: unused variable 't' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:138:55: warning: unused variable 'angind' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:39: warning: unused variable 'nat2' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:32: warning: unused variable 'natoms' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:18: warning: unused variable 'total' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:135:21: warning: unused variable 'Jc' [-Wunused-variable] real maxang,Jc,S2,norm_fac,maxstat; ^ ../../../src/tools/gmx_angle.c:132:14: warning: unused variable 'status' [-Wunused-variable] int status,isize; ^ ../../../src/tools/gmx_angle.c:131:14: warning: unused variable 'tmp' [-Wunused-variable] real tmp,dt; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_angle.c:47: ../../../src/tools/gmx_angle.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_angle.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_angle.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_angle.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_bundle.c -fPIC -DPIC -o .libs/gmx_bundle.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_bond.c -fPIC -DPIC -o .libs/gmx_bond.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_cluster.lo ../../../src/tools/gmx_cluster.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_chi.c -fPIC -DPIC -o .libs/gmx_chi.o ../../../src/tools/gmx_bundle.c: In function 'dump_axes': ../../../src/tools/gmx_bundle.c:141:17: warning: unused variable 'end' [-Wunused-variable] int i,end; ^ ../../../src/tools/gmx_bundle.c: In function 'gmx_bundle': ../../../src/tools/gmx_bundle.c:210:16: warning: unused variable 'j' [-Wunused-variable] int i,j,gnx[MAX_ENDS]; ^ ../../../src/tools/gmx_bundle.c:208:14: warning: unused variable 'natoms' [-Wunused-variable] int natoms; ^ ../../../src/tools/gmx_bundle.c:198:15: warning: unused variable 'out' [-Wunused-variable] FILE *out,*flen,*fdist,*fz,*ftilt,*ftiltr,*ftiltl; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_bundle.c:42: ../../../src/tools/gmx_bundle.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_bundle.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_bundle.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_bundle.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_analyze.c: In function 'luzar_correl': ../../../src/tools/gmx_analyze.c:514:8: warning: unused variable 'weight' [-Wunused-variable] real weight,d2; ^ ../../../src/tools/gmx_analyze.c:512:14: warning: unused variable 'tol' [-Wunused-variable] const real tol = 1e-8; ^ ../../../src/tools/gmx_analyze.c: In function 'gmx_analyze': ../../../src/tools/gmx_analyze.c:744:63: warning: unused variable 'bLuzarError' [-Wunused-variable] static bool bIntegrate=FALSE,bRegression=FALSE,bLuzar=FALSE,bLuzarError=FALSE; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_analyze.c:41: ../../../src/tools/gmx_analyze.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_analyze.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_analyze.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_analyze.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_analyze.c:273:13: warning: 'anal_ee' defined but not used [-Wunused-function] static real anal_ee(real *parm,real T,real t) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_bond.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_bond.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_bond.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_bond.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_confrms.lo ../../../src/tools/gmx_confrms.c ../../../src/tools/gmx_chi.c: In function 'histogramming': ../../../src/tools/gmx_chi.c:418:23: warning: unused variable 'his_aa1' [-Wunused-variable] int ***his_aa,**his_aa1,*histmp; ^ ../../../src/tools/gmx_chi.c: In function 'print_transitions': ../../../src/tools/gmx_chi.c:834:8: warning: variable 'nh' set but not used [-Wunused-but-set-variable] int nh[edMax]; ^ ../../../src/tools/gmx_chi.c: In function 'gmx_chi': ../../../src/tools/gmx_chi.c:1098:16: warning: unused variable 'j' [-Wunused-variable] int i,j,**chi_lookup,*xity; ^ In file included from ../../../src/tools/gmx_chi.c:43:0: ../../../src/tools/gmx_chi.c: At top level: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/tools/gmx_chi.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_chi.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_chi.c:49:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_chi.c:59:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_cluster.c -fPIC -DPIC -o .libs/gmx_cluster.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_covar.lo ../../../src/tools/gmx_covar.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_confrms.c -fPIC -DPIC -o .libs/gmx_confrms.o ../../../src/tools/gmx_confrms.c: In function 'find_matching_names': ../../../src/tools/gmx_confrms.c:252:35: warning: unused variable 'atnm2' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:27: warning: unused variable 'atnm1' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:18: warning: unused variable 'resnm2' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:9: warning: unused variable 'resnm1' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:249:7: warning: unused variable 'r' [-Wunused-variable] int r,rnr1, rnr2, prnr1, prnr2; ^ ../../../src/tools/gmx_confrms.c:247:7: warning: unused variable 'i' [-Wunused-variable] int i, i1, i2, ii1, ii2, m1, m2; ^ ../../../src/tools/gmx_confrms.c: In function 'gmx_confrms': ../../../src/tools/gmx_confrms.c:407:17: warning: unused variable 'tmas2' [-Wunused-variable] real tmas1,tmas2; ^ ../../../src/tools/gmx_confrms.c:407:11: warning: unused variable 'tmas1' [-Wunused-variable] real tmas1,tmas2; ^ ../../../src/tools/gmx_confrms.c:404:13: warning: unused variable 'j' [-Wunused-variable] int i,j,m; ^ In file included from ../../../src/tools/gmx_confrms.c:46:0: ../../../src/tools/gmx_confrms.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_confrms.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_confrms.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_confrms.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_confrms.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_covar.c -fPIC -DPIC -o .libs/gmx_covar.o ../../../src/tools/gmx_cluster.c: In function 'mark_clusters': ../../../src/tools/gmx_cluster.c:638:11: warning: unused variable 'v' [-Wunused-variable] int i,j,v; ^ In file included from ../../../src/tools/gmx_cluster.c:45:0: ../../../src/tools/gmx_cluster.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_cluster.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_cluster.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_cluster.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_covar.c: In function 'gmx_covar': ../../../src/tools/gmx_covar.c:120:30: warning: unused variable 'count' [-Wunused-variable] int natoms,nat,ndim,count,nframes0,nframes,nlevels; ^ ../../../src/tools/gmx_covar.c:119:24: warning: unused variable 'step' [-Wunused-variable] int ntopatoms,step; ^ ../../../src/tools/gmx_covar.c:119:14: warning: unused variable 'ntopatoms' [-Wunused-variable] int ntopatoms,step; ^ ../../../src/tools/gmx_covar.c:109:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_covar.c:43: ../../../src/tools/gmx_covar.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_covar.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_covar.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_covar.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_current.lo ../../../src/tools/gmx_current.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_density.lo ../../../src/tools/gmx_density.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_densmap.lo ../../../src/tools/gmx_densmap.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dih.lo ../../../src/tools/gmx_dih.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_current.c -fPIC -DPIC -o .libs/gmx_current.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_densmap.c -fPIC -DPIC -o .libs/gmx_densmap.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_density.c -fPIC -DPIC -o .libs/gmx_density.o ../../../src/tools/gmx_density.c: In function 'calc_density': ../../../src/tools/gmx_density.c:261:9: warning: unused variable 'buf' [-Wunused-variable] char *buf; /* for tmp. keeping atomname */ ^ ../../../src/tools/gmx_density.c:254:9: warning: unused variable 'j' [-Wunused-variable] i,j,n, /* loop indices */ ^ ../../../src/tools/gmx_density.c:253:9: warning: unused variable 'slCount' [-Wunused-variable] **slCount, /* nr. of atoms in one slice for a group */ ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_density.c:48: ../../../src/tools/gmx_density.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_density.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_density.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_density.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_densmap.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_densmap.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_densmap.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_densmap.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_current.c: In function 'calc_mjdsp': ../../../src/tools/gmx_current.c:266:7: warning: unused variable 'rfr' [-Wunused-variable] real rfr; ^ ../../../src/tools/gmx_current.c:265:8: warning: unused variable 'rtmp' [-Wunused-variable] real rtmp; ^ ../../../src/tools/gmx_current.c: In function 'dielectric': ../../../src/tools/gmx_current.c:338:8: warning: variable 'rest' set but not used [-Wunused-but-set-variable] real rest=0.0; ^ ../../../src/tools/gmx_current.c:326:8: warning: unused variable 'qtmp' [-Wunused-variable] real qtmp; ^ ../../../src/tools/gmx_current.c:308:13: warning: unused variable 'dm_d' [-Wunused-variable] real dm_s,dm_d; ^ ../../../src/tools/gmx_current.c:308:8: warning: unused variable 'dm_s' [-Wunused-variable] real dm_s,dm_d; ^ ../../../src/tools/gmx_current.c:298:8: warning: unused variable 'rfr' [-Wunused-variable] real rfr=0.0; ^ ../../../src/tools/gmx_current.c:293:33: warning: variable 'itrust' set but not used [-Wunused-but-set-variable] int valloc,nalloc,nfr,nvfr,m,itrust=0; ^ ../../../src/tools/gmx_current.c:293:31: warning: unused variable 'm' [-Wunused-variable] int valloc,nalloc,nfr,nvfr,m,itrust=0; ^ ../../../src/tools/gmx_current.c:292:17: warning: unused variable 'f' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c:292:15: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c:292:13: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c: In function 'gmx_current': ../../../src/tools/gmx_current.c:720:15: warning: unused variable 'tfile' [-Wunused-variable] FILE *tfile=NULL; ^ ../../../src/tools/gmx_current.c:719:15: warning: unused variable 'outi' [-Wunused-variable] FILE *outi=NULL; ^ ../../../src/tools/gmx_current.c:716:14: warning: unused variable 'lambda' [-Wunused-variable] real lambda; ^ ../../../src/tools/gmx_current.c:715:13: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_current.c:714:14: warning: unused variable 'step' [-Wunused-variable] int step; ^ ../../../src/tools/gmx_current.c:713:21: warning: unused variable 'l' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:713:17: warning: unused variable 'k' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:713:15: warning: unused variable 'j' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:711:12: warning: unused variable 'natoms' [-Wunused-variable] int natoms; ^ ../../../src/tools/gmx_current.c:707:10: warning: variable 'bNEU' set but not used [-Wunused-but-set-variable] bool bNEU; ^ ../../../src/tools/gmx_current.c:706:13: warning: variable 'bTop' set but not used [-Wunused-but-set-variable] bool bTop; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_current.c:40: ../../../src/tools/gmx_current.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_current.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_current.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_current.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dih.c -fPIC -DPIC -o .libs/gmx_dih.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dielectric.lo ../../../src/tools/gmx_dielectric.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_kinetics.lo ../../../src/tools/gmx_kinetics.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_kinetics.c -fPIC -DPIC -o .libs/gmx_kinetics.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_spatial.lo ../../../src/tools/gmx_spatial.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dielectric.c -fPIC -DPIC -o .libs/gmx_dielectric.o In file included from ../../../src/tools/gmx_dih.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dih.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dih.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dih.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_dih.c:55:13: warning: 'dump_dih' defined but not used [-Wunused-function] static void dump_dih(int nframes,char *title,real time[],real dih[]) ^ ../../../src/tools/gmx_kinetics.c: In function 'epnm': ../../../src/tools/gmx_kinetics.c:96:16: warning: unused variable 'ii' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:96:13: warning: unused variable 'ni' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:96:10: warning: unused variable 'nn' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:95:31: warning: unused variable 'to' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c:95:23: warning: unused variable 'from' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c:95:15: warning: unused variable 'buf' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c: In function 'dump_remd_parameters': ../../../src/tools/gmx_kinetics.c:559:8: warning: unused variable 'rhs' [-Wunused-variable] real rhs,tauf,taub,fff,DG; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_kinetics.c:42: ../../../src/tools/gmx_kinetics.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_kinetics.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_kinetics.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_kinetics.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_kinetics.c:85:14: warning: 'itoa' defined but not used [-Wunused-function] static char *itoa(int i) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dipoles.lo ../../../src/tools/gmx_dipoles.c ../../../src/tools/gmx_dielectric.c: In function 'calc_nbegin': ../../../src/tools/gmx_dielectric.c:60:11: warning: unused variable 'dtt' [-Wunused-variable] real dt,dtt; ^ ../../../src/tools/gmx_dielectric.c:60:8: warning: unused variable 'dt' [-Wunused-variable] real dt,dtt; ^ In file included from ../../../src/tools/gmx_dielectric.c:44:0: ../../../src/tools/gmx_dielectric.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_spatial.c -fPIC -DPIC -o .libs/gmx_spatial.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_dielectric.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_dielectric.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dielectric.c:53:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dipoles.c -fPIC -DPIC -o .libs/gmx_dipoles.o ../../../src/tools/gmx_spatial.c: In function 'gmx_spatial': ../../../src/tools/gmx_spatial.c:131:21: warning: unused variable 'shx' [-Wunused-variable] rvec *xtop,*shx[26]; ^ ../../../src/tools/gmx_spatial.c:103:15: warning: unused variable 'bSHIFT' [-Wunused-variable] static bool bSHIFT=FALSE; ^ ../../../src/tools/gmx_spatial.c: At top level: ../../../src/tools/gmx_spatial.c:38:14: warning: 'SRCID_template_c' defined but not used [-Wunused-variable] static char *SRCID_template_c = "$Id$"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_spatial.c:40: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_spatial.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_spatial.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_spatial.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_dipoles.c: In function 'do_gkr': ../../../src/tools/gmx_dipoles.c:156:17: warning: unused variable 'r2' [-Wunused-variable] real qtot,q,r2,cosa,rr,phi; ^ ../../../src/tools/gmx_dipoles.c:155:30: warning: unused variable 'index' [-Wunused-variable] int gi,gj,j0,j1,i,j,k,n,index,grp0,grp1; ^ ../../../src/tools/gmx_dipoles.c: In function 'print_gkrbin': ../../../src/tools/gmx_dipoles.c:291:14: warning: unused variable 'n' [-Wunused-variable] int i,j,n,last; ^ ../../../src/tools/gmx_dipoles.c:291:12: warning: unused variable 'j' [-Wunused-variable] int i,j,n,last; ^ ../../../src/tools/gmx_dipoles.c: In function 'mol_quad': ../../../src/tools/gmx_dipoles.c:418:17: warning: unused variable 'rcom_n' [-Wunused-variable] real rcom_m,rcom_n; ^ ../../../src/tools/gmx_dipoles.c:418:10: warning: unused variable 'rcom_m' [-Wunused-variable] real rcom_m,rcom_n; ^ ../../../src/tools/gmx_dipoles.c: In function 'compute_avercos': ../../../src/tools/gmx_dipoles.c:580:19: warning: unused variable 'n5' [-Wunused-variable] double dc,dc1,d,n5,ddc1,ddc2,ddc3; ^ ../../../src/tools/gmx_dipoles.c:580:13: warning: unused variable 'dc1' [-Wunused-variable] double dc,dc1,d,n5,ddc1,ddc2,ddc3; ^ ../../../src/tools/gmx_dipoles.c: In function 'do_dip': ../../../src/tools/gmx_dipoles.c:872:8: warning: unused variable 'gi' [-Wunused-variable] int gi,ind0,ind1; ^ ../../../src/tools/gmx_dipoles.c:675:27: warning: unused variable 'Vol' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:23: warning: unused variable 'Msq' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:20: warning: unused variable 'Mz' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:17: warning: unused variable 'My' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:14: warning: unused variable 'Mx' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:668:32: warning: unused variable 'lambda' [-Wunused-variable] real rcut=0,t,t0,t1,dt,lambda,dd,rms_cos; ^ ../../../src/tools/gmx_dipoles.c:667:25: warning: unused variable 'buf' [-Wunused-variable] char **enm=NULL,buf[STRLEN]; ^ ../../../src/tools/gmx_dipoles.c:665:44: warning: unused variable 'step' [-Wunused-variable] int *dipole_bin,ndipbin,ibin,iVol,step,idim=-1; ^ ../../../src/tools/gmx_dipoles.c:664:32: warning: unused variable 'nmol' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c:664:18: warning: unused variable 'k' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c:664:16: warning: unused variable 'j' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c: In function 'gmx_dipoles': ../../../src/tools/gmx_dipoles.c:1271:16: warning: unused variable 'bCorr' [-Wunused-variable] bool bCorr,bQuad,bGkr,bMU,bSlab; ^ ../../../src/tools/gmx_dipoles.c:1227:31: warning: unused variable 'bMolCorr' [-Wunused-variable] static bool bAverCorr=FALSE,bMolCorr=FALSE,bPairs=TRUE,bPhi=FALSE; ^ ../../../src/tools/gmx_dipoles.c:1227:15: warning: variable 'bAverCorr' set but not used [-Wunused-but-set-variable] static bool bAverCorr=FALSE,bMolCorr=FALSE,bPairs=TRUE,bPhi=FALSE; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dipoles.c:43: ../../../src/tools/gmx_dipoles.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dipoles.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dipoles.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_dipoles.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_disre.lo ../../../src/tools/gmx_disre.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dist.lo ../../../src/tools/gmx_dist.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dyndom.lo ../../../src/tools/gmx_dyndom.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dist.c -fPIC -DPIC -o .libs/gmx_dist.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_disre.c -fPIC -DPIC -o .libs/gmx_disre.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dyndom.c -fPIC -DPIC -o .libs/gmx_dyndom.o ../../../src/tools/gmx_disre.c: In function 'check_viol': ../../../src/tools/gmx_disre.c:144:11: warning: variable 'ener' set but not used [-Wunused-but-set-variable] real ener,rt,mviol,tviol,viol,lam,dvdl,drt; ^ ../../../src/tools/gmx_disre.c: In function 'dump_disre_matrix': ../../../src/tools/gmx_disre.c:449:12: warning: unused variable 'iii' [-Wunused-variable] int iii,i,j,nra,nratoms,tp,ri,rj,index,nlabel,label; ^ In file included from ../../../src/tools/gmx_disre.c:44:0: ../../../src/tools/gmx_disre.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_disre.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_disre.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_disre.c:53: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_disre.c:54:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/tools/gmx_disre.c:57:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/tools/gmx_dyndom.c: In function 'rot_conf': ../../../src/tools/gmx_dyndom.c:60:14: warning: unused variable 'j' [-Wunused-variable] int i,j,ai; ^ ../../../src/tools/gmx_dyndom.c:58:43: warning: unused variable 'temp43' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:58:36: warning: unused variable 'temp21' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:58:30: warning: unused variable 'temp4' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:57:49: warning: unused variable 'Tx' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:57:42: warning: unused variable 'Tinvcm' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:57:38: warning: unused variable 'Tcm' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:55:18: warning: unused variable 'center' [-Wunused-variable] rvec arrow,center,xcm; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dyndom.c:41: ../../../src/tools/gmx_dyndom.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_dyndom.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dyndom.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dyndom.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_enemat.lo ../../../src/tools/gmx_enemat.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_energy.lo ../../../src/tools/gmx_energy.c ../../../src/tools/gmx_dist.c: In function 'gmx_dist': ../../../src/tools/gmx_dist.c:101:21: warning: unused variable 'fplt' [-Wunused-variable] FILE *fp=NULL,*fplt=NULL; ^ ../../../src/tools/gmx_dist.c:93:11: warning: unused variable 'aid' [-Wunused-variable] atom_id aid; ^ ../../../src/tools/gmx_dist.c:87:17: warning: unused variable 'v' [-Wunused-variable] rvec *x=NULL,*v=NULL,dx; ^ In file included from ../../../src/tools/gmx_dist.c:45:0: ../../../src/tools/gmx_dist.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dist.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dist.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dist.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_lie.lo ../../../src/tools/gmx_lie.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_energy.c -fPIC -DPIC -o .libs/gmx_energy.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_enemat.c -fPIC -DPIC -o .libs/gmx_enemat.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_filter.lo ../../../src/tools/gmx_filter.c ../../../src/tools/gmx_energy.c: In function 'select_by_name': ../../../src/tools/gmx_energy.c:139:8: warning: unused variable 'n' [-Wunused-variable] int n,k,kk,j,i,nmatch,nind,nss; ^ ../../../src/tools/gmx_energy.c: In function 'analyse_ener': ../../../src/tools/gmx_energy.c:529:16: warning: unused variable 'kkk' [-Wunused-variable] int i,j,m,k,kkk; ^ ../../../src/tools/gmx_energy.c:524:30: warning: unused variable 'diffav' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:22: warning: unused variable 'diffsum' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:14: warning: unused variable 'oldfrac' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:8: warning: unused variable 'sfrac' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c: In function 'fec': ../../../src/tools/gmx_energy.c:770:8: warning: unused variable 't' [-Wunused-variable] real t, aver, beta; ^ ../../../src/tools/gmx_energy.c:766:22: warning: unused variable 'step' [-Wunused-variable] int nre,timecheck,step,nenergy2,maxenergy; ^ ../../../src/tools/gmx_energy.c:766:8: warning: unused variable 'nre' [-Wunused-variable] int nre,timecheck,step,nenergy2,maxenergy; ^ ../../../src/tools/gmx_energy.c: In function 'gmx_energy': ../../../src/tools/gmx_energy.c:979:16: warning: unused variable 'nms' [-Wunused-variable] char **nms; ^ ../../../src/tools/gmx_energy.c:977:27: warning: unused variable 'enm2' [-Wunused-variable] char **enm=NULL,**enm2=NULL,**leg=NULL,**pairleg,**odtleg,**otenleg; ^ ../../../src/tools/gmx_energy.c:973:42: warning: unused variable 'bEDR' [-Wunused-variable] bool bFoundFirst,bFoundOld,bCont,bEDR,bVisco; ^ ../../../src/tools/gmx_energy.c:959:23: warning: unused variable 'ee' [-Wunused-variable] t_energy *oldee,**ee; ^ ../../../src/tools/gmx_energy.c:953:16: warning: unused variable 'drout' [-Wunused-variable] FILE **drout; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_energy.c:46: ../../../src/tools/gmx_energy.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_energy.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_energy.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_energy.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_energy.c:118:12: warning: 'strcount' defined but not used [-Wunused-function] static int strcount(char *s1,char *s2) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_enemat.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_enemat.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_enemat.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_enemat.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_filter.c -fPIC -DPIC -o .libs/gmx_filter.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_lie.c -fPIC -DPIC -o .libs/gmx_lie.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_gyrate.lo ../../../src/tools/gmx_gyrate.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_h2order.lo ../../../src/tools/gmx_h2order.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_lie.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_lie.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_lie.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_lie.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_hbond.lo ../../../src/tools/gmx_hbond.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_gyrate.c -fPIC -DPIC -o .libs/gmx_gyrate.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_filter.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_filter.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_filter.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_filter.c:53:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_h2order.c -fPIC -DPIC -o .libs/gmx_h2order.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_helix.lo ../../../src/tools/gmx_helix.c ../../../src/tools/gmx_gyrate.c: In function 'gmx_gyrate': ../../../src/tools/gmx_gyrate.c:190:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_gyrate.c:43: ../../../src/tools/gmx_gyrate.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_gyrate.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_gyrate.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_gyrate.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_mindist.lo ../../../src/tools/gmx_mindist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_hbond.c -fPIC -DPIC -o .libs/gmx_hbond.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_h2order.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_h2order.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_h2order.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_h2order.c:54: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_helix.c -fPIC -DPIC -o .libs/gmx_helix.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_msd.lo ../../../src/tools/gmx_msd.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_mindist.c -fPIC -DPIC -o .libs/gmx_mindist.o ../../../src/tools/gmx_mindist.c: In function 'periodic_mindist_plot': ../../../src/tools/gmx_mindist.c:114:10: warning: unused variable 'r' [-Wunused-variable] real r,rmin,rmax,rmint,tmint; ^ ../../../src/tools/gmx_mindist.c: In function 'dist_plot': ../../../src/tools/gmx_mindist.c:245:16: warning: unused variable 'frout' [-Wunused-variable] t_trxframe frout; ^ ../../../src/tools/gmx_mindist.c: In function 'gmx_mindist': ../../../src/tools/gmx_mindist.c:473:15: warning: unused variable 'j' [-Wunused-variable] int i,j,nres=0; ^ ../../../src/tools/gmx_mindist.c:472:14: warning: unused variable 'atm' [-Wunused-variable] FILE *atm; ^ ../../../src/tools/gmx_mindist.c:467:14: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_mindist.c:441:16: warning: unused variable 'bugs' [-Wunused-variable] static char *bugs[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_mindist.c:48: ../../../src/tools/gmx_mindist.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_mindist.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_mindist.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_mindist.c:53: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_morph.lo ../../../src/tools/gmx_morph.c ../../../src/tools/gmx_helix.c: In function 'gmx_helix': ../../../src/tools/gmx_helix.c:213:21: warning: unused variable 'nre' [-Wunused-variable] int natoms,nre,nres,step; ^ In file included from ../../../src/tools/gmx_helix.c:43:0: ../../../src/tools/gmx_helix.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_helix.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_helix.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_helix.c:62:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_hbond.c: In function 'mk_hbmap': ../../../src/tools/gmx_hbond.c:182:10: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/tools/gmx_hbond.c: In function 'add_frames': ../../../src/tools/gmx_hbond.c:194:14: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:12: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:10: warning: unused variable 'j' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:8: warning: unused variable 'i' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c: In function 'search_donors': ../../../src/tools/gmx_hbond.c:543:14: warning: unused variable 'stop' [-Wunused-variable] bool stop; ^ ../../../src/tools/gmx_hbond.c:539:22: warning: unused variable 'n' [-Wunused-variable] int i,j,nra,n; ^ ../../../src/tools/gmx_hbond.c:539:18: warning: unused variable 'nra' [-Wunused-variable] int i,j,nra,n; ^ ../../../src/tools/gmx_hbond.c: In function 'is_hbond': ../../../src/tools/gmx_hbond.c:900:19: warning: unused variable 'ihb' [-Wunused-variable] int h,hh,id,ja,ihb; ^ ../../../src/tools/gmx_hbond.c: In function 'merge_hb': ../../../src/tools/gmx_hbond.c:1021:44: warning: unused variable 'ogrp' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c:1021:40: warning: unused variable 'grp' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c:1021:32: warning: unused variable 'm' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c: In function 'do_nhb_dist': ../../../src/tools/gmx_hbond.c:1077:8: warning: unused variable 'nhb' [-Wunused-variable] h_id nhb; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_msd.c -fPIC -DPIC -o .libs/gmx_msd.o ../../../src/tools/gmx_hbond.c: In function 'smooth_tail': ../../../src/tools/gmx_hbond.c:1439:9: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/tools/gmx_hbond.c: In function 'analyse_corr': ../../../src/tools/gmx_hbond.c:1461:56: warning: unused variable 'dt' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:28: warning: unused variable 'dgp' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:25: warning: unused variable 'dg' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:14: warning: variable 'chi22' set but not used [-Wunused-but-set-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c: In function 'do_hbac': ../../../src/tools/gmx_hbond.c:1585:27: warning: variable 'ngh' set but not used [-Wunused-but-set-variable] int nh,nhbonds,nhydro,ngh; ^ ../../../src/tools/gmx_hbond.c:1577:18: warning: unused variable 'nd' [-Wunused-variable] int i,j,k,m,n,nd,ihb,idist,n2,nn; ^ ../../../src/tools/gmx_hbond.c:1577:16: warning: unused variable 'n' [-Wunused-variable] int i,j,k,m,n,nd,ihb,idist,n2,nn; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_morph.c -fPIC -DPIC -o .libs/gmx_morph.o ../../../src/tools/gmx_hbond.c: In function 'gmx_hbond': ../../../src/tools/gmx_hbond.c:2051:30: warning: unused variable 'bin' [-Wunused-variable] int grp,nabin,nrbin,bin,resdist,ihb; ^ ../../../src/tools/gmx_hbond.c:2049:43: warning: unused variable 'was' [-Wunused-variable] bool bSelected,bHBmap,bStop,bTwo,new,was,bBox,bTric; ^ ../../../src/tools/gmx_hbond.c:2049:39: warning: unused variable 'new' [-Wunused-variable] bool bSelected,bHBmap,bStop,bTwo,new,was,bBox,bTric; ^ ../../../src/tools/gmx_hbond.c:2045:34: warning: unused variable 'ja' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:31: warning: unused variable 'id' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:27: warning: unused variable 'end' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:21: warning: unused variable 'start' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:19: warning: unused variable 'l' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_hbond.c:42: ../../../src/tools/gmx_hbond.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_hbond.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_hbond.c:53: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_hbond.c:53:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.h:40, from ../../../src/tools/gmx_hbond.c:59: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/tools/gmx_hbond.c:372:13: warning: 'in_list' defined but not used [-Wunused-function] static bool in_list(atom_id selection,int isize,atom_id *index) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmeig.lo ../../../src/tools/gmx_nmeig.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmens.lo ../../../src/tools/gmx_nmens.c ../../../src/tools/gmx_msd.c: In function 'printmol': ../../../src/tools/gmx_msd.c:455:13: warning: unused variable 'r' [-Wunused-variable] real a,b,r,D,Dav,D2av,VarD,sqrtD,sqrtD_max,scale; ^ ../../../src/tools/gmx_msd.c:452:14: warning: unused variable 'out_pdb' [-Wunused-variable] FILE *out,out_pdb; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_msd.c:47: ../../../src/tools/gmx_msd.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_msd.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_msd.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_msd.c:144:13: warning: 'done_corr' defined but not used [-Wunused-function] static void done_corr(t_corr *this) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_morph.c:40: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_morph.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmeig.c -fPIC -DPIC -o .libs/gmx_nmeig.o ../../../src/tools/gmx_nmeig.c: In function 'nma_full_hessian': ../../../src/tools/gmx_nmeig.c:76:19: warning: unused variable 'rdum' [-Wunused-variable] real mass_fac,rdum; ^ ../../../src/tools/gmx_nmeig.c: In function 'gmx_nmeig': ../../../src/tools/gmx_nmeig.c:229:15: warning: unused variable 'index' [-Wunused-variable] atom_id *index; ^ ../../../src/tools/gmx_nmeig.c:227:24: warning: unused variable 'gnx' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:227:22: warning: unused variable 'd' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:227:20: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:226:15: warning: unused variable 'grpname' [-Wunused-variable] char *grpname,title[256]; ^ ../../../src/tools/gmx_nmeig.c:225:36: warning: unused variable 'count' [-Wunused-variable] int natoms,ndim,nrow,ncol,count; ^ ../../../src/tools/gmx_nmeig.c:224:19: warning: unused variable 'mass_fac' [-Wunused-variable] real rdum,mass_fac; ^ ../../../src/tools/gmx_nmeig.c:224:14: warning: unused variable 'rdum' [-Wunused-variable] real rdum,mass_fac; ^ ../../../src/tools/gmx_nmeig.c:217:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_nmeig.c:217:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmeig.c:43: ../../../src/tools/gmx_nmeig.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmeig.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmeig.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmeig.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_order.lo ../../../src/tools/gmx_order.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmens.c -fPIC -DPIC -o .libs/gmx_nmens.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_principal.lo ../../../src/tools/gmx_principal.c In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../src/tools/gmx_msd.c: In function 'corr_loop': ../../../include/vec.h:325:4: warning: '*((void *)&com+8)' may be used uninitialized in this function [-Wmaybe-uninitialized] z=a[ZZ]-b[ZZ]; ^ ../../../src/tools/gmx_msd.c:525:29: note: '*((void *)&com+8)' was declared here rvec *x[2],*xa[2],com; ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:324:4: warning: '*((void *)&com+4)' may be used uninitialized in this function [-Wmaybe-uninitialized] y=a[YY]-b[YY]; ^ ../../../src/tools/gmx_msd.c:525:29: note: '*((void *)&com+4)' was declared here rvec *x[2],*xa[2],com; ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:323:4: warning: 'com' may be used uninitialized in this function [-Wmaybe-uninitialized] x=a[XX]-b[XX]; ^ ../../../src/tools/gmx_msd.c:525:29: note: 'com' was declared here rvec *x[2],*xa[2],com; ^ ../../../src/tools/gmx_nmens.c: In function 'gmx_nmens': ../../../src/tools/gmx_nmens.c:105:14: warning: unused variable 'eigvalnr' [-Wunused-variable] int * eigvalnr; ^ ../../../src/tools/gmx_nmens.c:104:19: warning: unused variable 'invfr' [-Wunused-variable] real rfac,invfr,rhalf,jr; ^ ../../../src/tools/gmx_nmens.c:99:21: warning: unused variable 'neigval' [-Wunused-variable] int natoms,neigval; ^ ../../../src/tools/gmx_nmens.c:98:22: warning: unused variable 'totmass' [-Wunused-variable] real *eigval,totmass,*invsqrtm,t,disp; ^ ../../../src/tools/gmx_nmens.c:89:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_nmens.c:89:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmens.c:43: ../../../src/tools/gmx_nmens.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmens.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmens.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmens.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_nmens.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_order.c -fPIC -DPIC -o .libs/gmx_order.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_polystat.lo ../../../src/tools/gmx_polystat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_principal.c -fPIC -DPIC -o .libs/gmx_principal.o ../../../src/tools/gmx_principal.c: In function 'gmx_principal': ../../../src/tools/gmx_principal.c:97:20: warning: unused variable 'a3' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:97:17: warning: unused variable 'a2' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:97:14: warning: unused variable 'a1' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:95:28: warning: unused variable 'mol' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:24: warning: unused variable 'nam' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:18: warning: unused variable 'm' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:16: warning: unused variable 'j' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_principal.c:43: ../../../src/tools/gmx_principal.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_principal.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_principal.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_principal.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_order.c: In function 'find_nearest_neighbours': ../../../src/tools/gmx_order.c:86:12: warning: unused variable 'nnb' [-Wunused-variable] int **nnb; ^ ../../../src/tools/gmx_order.c:85:14: warning: unused variable 'mm' [-Wunused-variable] int m1,mm; ^ ../../../src/tools/gmx_order.c:85:11: warning: unused variable 'm1' [-Wunused-variable] int m1,mm; ^ ../../../src/tools/gmx_order.c:84:12: warning: unused variable 'd' [-Wunused-variable] t_dist *d; ^ ../../../src/tools/gmx_order.c:83:12: warning: unused variable 'dmat' [-Wunused-variable] t_mat *dmat; ^ ../../../src/tools/gmx_order.c:80:18: warning: unused variable 'dx2' [-Wunused-variable] rvec dx,dx1,dx2,rj,rk,urk,urj; ^ ../../../src/tools/gmx_order.c:80:14: warning: unused variable 'dx1' [-Wunused-variable] rvec dx,dx1,dx2,rj,rk,urk,urj; ^ ../../../src/tools/gmx_order.c:79:14: warning: unused variable 'i2' [-Wunused-variable] int i1,i2,i,ibin,j,k,l,n,*nn[4]; ^ ../../../src/tools/gmx_order.c:79:11: warning: unused variable 'i1' [-Wunused-variable] int i1,i2,i,ibin,j,k,l,n,*nn[4]; ^ ../../../src/tools/gmx_order.c:77:11: warning: unused variable 'fnsgdist' [-Wunused-variable] char fnsgdist[32]; ^ ../../../src/tools/gmx_order.c:76:12: warning: unused variable 'fpoutdist' [-Wunused-variable] FILE *fpoutdist; ^ ../../../src/tools/gmx_order.c: In function 'calc_tetra_order_parm': ../../../src/tools/gmx_order.c:228:14: warning: unused variable 'i' [-Wunused-variable] int i,*isize,ng,nframes; ^ ../../../src/tools/gmx_order.c:219:39: warning: unused variable 'subtitle' [-Wunused-variable] char title[STRLEN],fn[STRLEN],subtitle[STRLEN]; ^ ../../../src/tools/gmx_order.c:219:28: warning: unused variable 'fn' [-Wunused-variable] char title[STRLEN],fn[STRLEN],subtitle[STRLEN]; ^ ../../../src/tools/gmx_order.c: In function 'calc_order': ../../../src/tools/gmx_order.c:315:9: warning: unused variable 'dbangle' [-Wunused-variable] real dbangle = 0, /* angle between double bond and axis */ ^ ../../../src/tools/gmx_order.c:311:13: warning: unused variable 'l' [-Wunused-variable] i,j,m,k,l,teller = 0, ^ ../../../src/tools/gmx_order.c: In function 'gmx_order': ../../../src/tools/gmx_order.c:556:13: warning: unused variable 'i' [-Wunused-variable] i, ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_order.c:48: ../../../src/tools/gmx_order.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_order.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_order.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_order.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_potential.lo ../../../src/tools/gmx_potential.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rama.lo ../../../src/tools/gmx_rama.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_polystat.c -fPIC -DPIC -o .libs/gmx_polystat.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_potential.c -fPIC -DPIC -o .libs/gmx_potential.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rdf.lo ../../../src/tools/gmx_rdf.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_polystat.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_polystat.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_polystat.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_polystat.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rama.c -fPIC -DPIC -o .libs/gmx_rama.o ../../../src/tools/gmx_potential.c: In function 'calc_potential': ../../../src/tools/gmx_potential.c:108:9: warning: unused variable 'j' [-Wunused-variable] i,j,n, /* loop indices */ ^ ../../../src/tools/gmx_potential.c:107:9: warning: unused variable 'slCount' [-Wunused-variable] **slCount, /* nr. of atoms in one slice for a group */ ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_potential.c:50: ../../../src/tools/gmx_potential.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_potential.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_potential.c:53:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_potential.c:55: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rama.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rama.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rama.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rama.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rdf.c -fPIC -DPIC -o .libs/gmx_rdf.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rms.lo ../../../src/tools/gmx_rms.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rms.c -fPIC -DPIC -o .libs/gmx_rms.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rmsdist.lo ../../../src/tools/gmx_rmsdist.c In file included from ../../../src/tools/gmx_rms.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rms.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rms.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rms.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_rdf.c: In function 'do_rdf': ../../../src/tools/gmx_rdf.c:168:23: warning: unused variable 'index_cm' [-Wunused-variable] atom_id **index,*index_cm=NULL; ^ ../../../src/tools/gmx_rdf.c:167:21: warning: unused variable 'isize_cm' [-Wunused-variable] int *isize,isize_cm=0,nrdf=0,max_i,isize0,isize_g; ^ ../../../src/tools/gmx_rdf.c:164:40: warning: unused variable 'n' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:164:37: warning: unused variable 'j1' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:164:34: warning: unused variable 'j0' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:162:28: warning: unused variable 'outf2' [-Wunused-variable] char outf1[STRLEN],outf2[STRLEN]; ^ ../../../src/tools/gmx_rdf.c:162:14: warning: unused variable 'outf1' [-Wunused-variable] char outf1[STRLEN],outf2[STRLEN]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rdf.c:47: ../../../src/tools/gmx_rdf.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rdf.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rdf.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rdf.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/fftgrid.h:46:0, from ../../../src/tools/gmx_rdf.c:57: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rmsf.lo ../../../src/tools/gmx_rmsf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rmsdist.c -fPIC -DPIC -o .libs/gmx_rmsdist.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rotacf.lo ../../../src/tools/gmx_rotacf.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_saltbr.lo ../../../src/tools/gmx_saltbr.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sas.lo ../../../src/tools/gmx_sas.c ../../../src/tools/gmx_rmsdist.c: In function 'analyze_noe_equivalent': ../../../src/tools/gmx_rmsdist.c:249:11: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/tools/gmx_rmsdist.c: In function 'gmx_rmsdist': ../../../src/tools/gmx_rmsdist.c:534:36: warning: unused variable 'gj' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ ../../../src/tools/gmx_rmsdist.c:534:33: warning: unused variable 'gi' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ ../../../src/tools/gmx_rmsdist.c:534:24: warning: unused variable 'j' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ In file included from ../../../src/tools/gmx_rmsdist.c:47:0: ../../../src/tools/gmx_rmsdist.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rmsdist.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rmsdist.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rmsdist.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rmsf.c -fPIC -DPIC -o .libs/gmx_rmsf.o ../../../src/tools/gmx_rmsf.c: In function 'gmx_rmsf': ../../../src/tools/gmx_rmsf.c:211:16: warning: unused variable 'buf' [-Wunused-variable] char buf[256],*label; ^ ../../../src/tools/gmx_rmsf.c:210:33: warning: unused variable 'res0' [-Wunused-variable] int status,npdbatoms,res0; ^ ../../../src/tools/gmx_rmsf.c:206:16: warning: unused variable 'bCont' [-Wunused-variable] bool bCont; ^ ../../../src/tools/gmx_rmsf.c:202:16: warning: unused variable 'ir' [-Wunused-variable] t_inputrec ir; ^ ../../../src/tools/gmx_rmsf.c:201:16: warning: unused variable 'header' [-Wunused-variable] t_tpxheader header; ^ ../../../src/tools/gmx_rmsf.c:199:33: warning: unused variable 'w_rms' [-Wunused-variable] real t,lambda,*w_rls,*w_rms; ^ ../../../src/tools/gmx_rmsf.c:199:18: warning: unused variable 'lambda' [-Wunused-variable] real t,lambda,*w_rls,*w_rms; ^ ../../../src/tools/gmx_rmsf.c:198:40: warning: unused variable 'g' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:31: warning: unused variable 'natoms' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:21: warning: unused variable 'nre' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:16: warning: unused variable 'step' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:189:39: warning: unused variable 'bdevX' [-Wunused-variable] static bool bRes=FALSE,bAniso=FALSE,bdevX=FALSE,bFit=TRUE; ^ In file included from ../../../src/tools/gmx_rmsf.c:45:0: ../../../src/tools/gmx_rmsf.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rmsf.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rmsf.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rmsf.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rmsf.c:50:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_saltbr.c -fPIC -DPIC -o .libs/gmx_saltbr.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rotacf.c -fPIC -DPIC -o .libs/gmx_rotacf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sas.c -fPIC -DPIC -o .libs/gmx_sas.o ../../../src/tools/gmx_saltbr.c: In function 'gmx_saltbr': ../../../src/tools/gmx_saltbr.c:163:14: warning: unused variable 'label' [-Wunused-variable] char label[234]; ^ ../../../src/tools/gmx_saltbr.c:162:17: warning: unused variable 'dt' [-Wunused-variable] double t0,dt; ^ ../../../src/tools/gmx_saltbr.c:162:14: warning: unused variable 't0' [-Wunused-variable] double t0,dt; ^ ../../../src/tools/gmx_saltbr.c:156:50: warning: unused variable 'n3' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ ../../../src/tools/gmx_saltbr.c:156:47: warning: unused variable 'n2' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ ../../../src/tools/gmx_saltbr.c:156:44: warning: unused variable 'n1' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_saltbr.c:43: ../../../src/tools/gmx_saltbr.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_saltbr.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_saltbr.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_saltbr.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_sas.c: In function 'sas_plot': ../../../src/tools/gmx_sas.c:369:12: warning: unused variable 'mm' [-Wunused-variable] real mm; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sas.c:47: ../../../src/tools/gmx_sas.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sas.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sas.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sas.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_sas.c:55:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sdf.lo ../../../src/tools/gmx_sdf.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sgangle.lo ../../../src/tools/gmx_sgangle.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rotacf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_rotacf.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rotacf.c:54: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rotacf.c:54:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sdf.c -fPIC -DPIC -o .libs/gmx_sdf.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sorient.lo ../../../src/tools/gmx_sorient.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sgangle.c -fPIC -DPIC -o .libs/gmx_sgangle.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_spol.lo ../../../src/tools/gmx_spol.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sgangle.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sgangle.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sgangle.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sgangle.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sorient.c -fPIC -DPIC -o .libs/gmx_sorient.o ../../../src/tools/gmx_sdf.c: In function 'do_sdf': ../../../src/tools/gmx_sdf.c:101:25: warning: unused variable 'bRefDone' [-Wunused-variable] bool bTop=FALSE,bRefDone=FALSE,bInGroup=FALSE; ^ ../../../src/tools/gmx_sdf.c:97:17: warning: unused variable 'jx' [-Wunused-variable] atom_id ix,jx; ^ ../../../src/tools/gmx_sdf.c:97:14: warning: unused variable 'ix' [-Wunused-variable] atom_id ix,jx; ^ ../../../src/tools/gmx_sdf.c:92:17: warning: unused variable 'xcog' [-Wunused-variable] rvec *x,xcog,dx,*x_i1,xi,*x_refmol; ^ ../../../src/tools/gmx_sdf.c:89:23: warning: variable 'hbox' set but not used [-Wunused-but-set-variable] real t,boxmin,hbox,normfac; ^ ../../../src/tools/gmx_sdf.c:88:15: warning: unused variable 'index_ref' [-Wunused-variable] atom_id *index_ref=NULL; ^ ../../../src/tools/gmx_sdf.c:87:15: warning: unused variable 'index_cg' [-Wunused-variable] atom_id *index_cg=NULL; ^ ../../../src/tools/gmx_sdf.c:85:24: warning: unused variable 'refc' [-Wunused-variable] int nrefmol=0,refc=0; ^ ../../../src/tools/gmx_sdf.c:83:14: warning: unused variable 'isize_ref' [-Wunused-variable] int isize_ref=3; ^ ../../../src/tools/gmx_sdf.c:82:14: warning: unused variable 'isize_cg' [-Wunused-variable] int isize_cg=0; ^ ../../../src/tools/gmx_sdf.c:75:41: warning: unused variable 'dest' [-Wunused-variable] int ng,natoms,i,j,k,l,X,Y,Z,lc,dest; ^ ../../../src/tools/gmx_sdf.c:75:38: warning: unused variable 'lc' [-Wunused-variable] int ng,natoms,i,j,k,l,X,Y,Z,lc,dest; ^ ../../../src/tools/gmx_sdf.c: At top level: ../../../src/tools/gmx_sdf.c:20:14: warning: 'SRCID_template_c' defined but not used [-Wunused-variable] static char *SRCID_template_c = "$Id$"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sdf.c:28: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sdf.c:28:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sdf.c:31:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sdf.c:33: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/gmx_sorient.c: In function 'gmx_sorient': ../../../src/tools/gmx_sorient.c:114:72: warning: unused variable 'mtot' [-Wunused-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:114:67: warning: unused variable 'mass' [-Wunused-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:114:20: warning: variable 'two_pi' set but not used [-Wunused-but-set-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:108:13: warning: unused variable 'j' [-Wunused-variable] int i,j,p,sa0,sa1,sa2,n,ntot,nf,m,*hist1,*hist2,*histn,nbin1,nbin2,nrbin; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sorient.c:41: ../../../src/tools/gmx_sorient.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_sorient.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sorient.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sorient.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_tcaf.lo ../../../src/tools/gmx_tcaf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_spol.c -fPIC -DPIC -o .libs/gmx_spol.o ../../../src/tools/gmx_spol.c: In function 'gmx_spol': ../../../src/tools/gmx_spol.c:165:28: warning: unused variable 'bPBC' [-Wunused-variable] static bool bCom = FALSE,bPBC = FALSE; ^ ../../../src/tools/gmx_spol.c:131:13: warning: unused variable 'xtop' [-Wunused-variable] rvec *xtop,*x,xref,try,dx,dip,dir; ^ ../../../src/tools/gmx_spol.c:127:12: warning: unused variable 'title' [-Wunused-variable] char title[STRLEN]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_spol.c:41: ../../../src/tools/gmx_spol.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_spol.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_spol.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_spol.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_traj.lo ../../../src/tools/gmx_traj.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_tcaf.c -fPIC -DPIC -o .libs/gmx_tcaf.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_velacc.lo ../../../src/tools/gmx_velacc.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_helixorient.lo ../../../src/tools/gmx_helixorient.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_traj.c -fPIC -DPIC -o .libs/gmx_traj.o ../../../src/tools/gmx_tcaf.c: In function 'gmx_tcaf': ../../../src/tools/gmx_tcaf.c:274:16: warning: unused variable 'c1' [-Wunused-variable] real **c1,**tc; ^ ../../../src/tools/gmx_tcaf.c:265:14: warning: unused variable 'bTPS' [-Wunused-variable] bool bTPS,bTop; /* ,bCubic; */ ^ In file included from ../../../src/tools/gmx_tcaf.c:43:0: ../../../src/tools/gmx_tcaf.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_tcaf.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_tcaf.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_tcaf.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_velacc.c -fPIC -DPIC -o .libs/gmx_velacc.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_helixorient.c -fPIC -DPIC -o .libs/gmx_helixorient.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_clustsize.lo ../../../src/tools/gmx_clustsize.c ../../../src/tools/gmx_helixorient.c: In function 'gmx_helixorient': ../../../src/tools/gmx_helixorient.c:125:14: warning: unused variable 'rotangle' [-Wunused-variable] real tmp,rotangle; ^ ../../../src/tools/gmx_helixorient.c:107:10: warning: unused variable 'axes' [-Wunused-variable] rvec axes[3]; ^ ../../../src/tools/gmx_helixorient.c:106:10: warning: unused variable 'axes_t0' [-Wunused-variable] rvec axes_t0[3]; ^ ../../../src/tools/gmx_helixorient.c:93:27: warning: unused variable 'vproj' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:22: warning: unused variable 'vtmp' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:19: warning: unused variable 'p2' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:16: warning: unused variable 'p1' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:92:10: warning: unused variable 'averageaxis' [-Wunused-variable] rvec averageaxis; ^ ../../../src/tools/gmx_helixorient.c:86:9: warning: unused variable 'd' [-Wunused-variable] int d,i,j,teller=0; ^ ../../../src/tools/gmx_helixorient.c:80:18: warning: unused variable 'dx' [-Wunused-variable] rvec *x=NULL,dx; ^ In file included from ../../../src/tools/gmx_helixorient.c:45:0: ../../../src/tools/gmx_helixorient.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_helixorient.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_helixorient.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_helixorient.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_traj.c: In function 'write_pdb_bfac': ../../../src/tools/gmx_traj.c:337:11: warning: unused variable 'bOne' [-Wunused-variable] bool bOne; ^ ../../../src/tools/gmx_traj.c: In function 'gmx_traj': ../../../src/tools/gmx_traj.c:525:18: warning: unused variable 'n' [-Wunused-variable] int i,j,n; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_traj.c:42: ../../../src/tools/gmx_traj.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_traj.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_traj.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_traj.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_velacc.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_velacc.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_velacc.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_velacc.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_mdmat.lo ../../../src/tools/gmx_mdmat.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wham.lo ../../../src/tools/gmx_wham.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_clustsize.c -fPIC -DPIC -o .libs/gmx_clustsize.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_wham.c -fPIC -DPIC -o .libs/gmx_wham.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_mdmat.c -fPIC -DPIC -o .libs/gmx_mdmat.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o correl.lo ../../../src/tools/correl.c ../../../src/tools/gmx_mdmat.c: In function 'gmx_mdmat': ../../../src/tools/gmx_mdmat.c:193:14: warning: unused variable 'nr0' [-Wunused-variable] int nr0; ^ ../../../src/tools/gmx_mdmat.c:192:45: warning: unused variable 'it' [-Wunused-variable] int i,j,status,nres,natoms,nframes,it,trxnat; ^ ../../../src/tools/gmx_mdmat.c:165:15: warning: unused variable 'bAtom' [-Wunused-variable] static bool bAtom=FALSE; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_mdmat.c:44: ../../../src/tools/gmx_mdmat.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_mdmat.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_mdmat.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_mdmat.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sham.lo ../../../src/tools/gmx_sham.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/correl.c -fPIC -DPIC -o .libs/correl.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_wham.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_wham.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_wham.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_wham.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sham.c -fPIC -DPIC -o .libs/gmx_sham.o ../../../src/tools/gmx_clustsize.c: In function 'clust_size': ../../../src/tools/gmx_clustsize.c:94:50: warning: unused variable 'n_y' [-Wunused-variable] int i,j,k,ai,aj,ak,ci,cj,nframe,nclust,n_x,n_y,max_size=0; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmtraj.lo ../../../src/tools/gmx_nmtraj.c ../../../src/tools/gmx_clustsize.c:94:23: warning: unused variable 'ak' [-Wunused-variable] int i,j,k,ai,aj,ak,ci,cj,nframe,nclust,n_x,n_y,max_size=0; ^ ../../../src/tools/gmx_clustsize.c:89:40: warning: unused variable 'nsame' [-Wunused-variable] int version,generation,sss,ii,jj,nsame; ^ ../../../src/tools/gmx_clustsize.c: In function 'gmx_clustsize': ../../../src/tools/gmx_clustsize.c:396:18: warning: unused variable 'bRDF' [-Wunused-variable] bool bSQ,bRDF; ^ ../../../src/tools/gmx_clustsize.c:396:14: warning: unused variable 'bSQ' [-Wunused-variable] bool bSQ,bRDF; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_clustsize.c:47: ../../../src/tools/gmx_clustsize.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_clustsize.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_clustsize.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_clustsize.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/pme.h:46:0, from ../../../src/tools/gmx_clustsize.c:62: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/tools/correl.c: In function 'complex_mult': ../../../src/tools/correl.c:189:10: warning: unused variable 'no2' [-Wunused-variable] int i,no2,n_2,k; ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.c:43: ../../../src/tools/correl.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/tools/gmx_sham.c: In function 'do_sham': ../../../src/tools/gmx_sham.c:286:32: warning: unused variable 'd' [-Wunused-variable] int i,j,k,imin,len,index,d,*nbin,*bindex,bi; ^ ../../../src/tools/gmx_sham.c: In function 'gmx_sham': ../../../src/tools/gmx_sham.c:778:41: warning: unused variable 'db' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:36: warning: unused variable 'cum4' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:31: warning: unused variable 'cum3' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:26: warning: unused variable 'cum2' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:21: warning: unused variable 'cum1' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:17: warning: unused variable 'sig' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:13: warning: unused variable 'av' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:776:66: warning: unused variable 'error' [-Wunused-variable] real **val,**et_val,**dt_val,*t,*e_t,e_dt,d_dt,*d_t,dt,tot,error; ^ ../../../src/tools/gmx_sham.c:776:62: warning: unused variable 'tot' [-Wunused-variable] real **val,**et_val,**dt_val,*t,*e_t,e_dt,d_dt,*d_t,dt,tot,error; ^ ../../../src/tools/gmx_sham.c:775:51: warning: unused variable 'j' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:775:28: warning: unused variable 's' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:775:22: warning: unused variable 'nlast' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:774:13: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ ../../../src/tools/gmx_sham.c:728:35: warning: unused variable 'resol' [-Wunused-variable] static int nsets_in=1,nb_min=4,resol=10,nlevels=25; ^ ../../../src/tools/gmx_sham.c:728:26: warning: unused variable 'nb_min' [-Wunused-variable] static int nsets_in=1,nb_min=4,resol=10,nlevels=25; ^ ../../../src/tools/gmx_sham.c:723:15: warning: unused variable 'bShamEner' [-Wunused-variable] static bool bShamEner=TRUE,bSham=TRUE; ^ ../../../src/tools/gmx_sham.c:722:56: warning: unused variable 'bPower' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:41: warning: unused variable 'bEeFitAc' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:28: warning: unused variable 'bEENLC' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:15: warning: unused variable 'bEESEF' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:721:66: warning: unused variable 'bXYdy' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:721:50: warning: unused variable 'bAverCorr' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:721:38: warning: unused variable 'bSubAv' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:720:36: warning: unused variable 'filtlen' [-Wunused-variable] static real tb=-1,te=-1,frac=0.5,filtlen=0,binwidth=0.1; ^ ../../../src/tools/gmx_sham.c:720:27: warning: unused variable 'frac' [-Wunused-variable] static real tb=-1,te=-1,frac=0.5,filtlen=0,binwidth=0.1; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sham.c:41: ../../../src/tools/gmx_sham.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sham.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sham.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sham.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_sham.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmtraj.c -fPIC -DPIC -o .libs/gmx_nmtraj.o ../../../src/tools/gmx_nmtraj.c: In function 'gmx_nmtraj': ../../../src/tools/gmx_nmtraj.c:129:14: warning: variable 'dum' set but not used [-Wunused-but-set-variable] real dum; ^ ../../../src/tools/gmx_nmtraj.c:124:14: warning: unused variable 'found' [-Wunused-variable] bool found; ^ ../../../src/tools/gmx_nmtraj.c:123:25: warning: unused variable 'sum' [-Wunused-variable] real omega,Ekin,sum,m,vel; ^ ../../../src/tools/gmx_nmtraj.c:121:15: warning: unused variable 'out_eigval' [-Wunused-variable] real *out_eigval; ^ ../../../src/tools/gmx_nmtraj.c:115:14: warning: unused variable 'neigval' [-Wunused-variable] int neigval; ^ ../../../src/tools/gmx_nmtraj.c:113:14: warning: unused variable 'grpname' [-Wunused-variable] char * grpname; ^ ../../../src/tools/gmx_nmtraj.c:111:14: warning: unused variable 'indexfile' [-Wunused-variable] char * indexfile; ^ ../../../src/tools/gmx_nmtraj.c:109:30: warning: unused variable 'v' [-Wunused-variable] int i,j,k,kmode,d,s,v; ^ ../../../src/tools/gmx_nmtraj.c:109:28: warning: unused variable 's' [-Wunused-variable] int i,j,k,kmode,d,s,v; ^ ../../../src/tools/gmx_nmtraj.c:105:15: warning: unused variable 'eigvalnr' [-Wunused-variable] int *eigvalnr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmtraj.c:43: ../../../src/tools/gmx_nmtraj.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmtraj.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmtraj.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmtraj.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_nmtraj.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjconv.lo ../../../src/tools/gmx_trjconv.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjcat.lo ../../../src/tools/gmx_trjcat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjconv.c -fPIC -DPIC -o .libs/gmx_trjconv.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjorder.lo ../../../src/tools/gmx_trjorder.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_xpm2ps.lo ../../../src/tools/gmx_xpm2ps.c ../../../src/tools/gmx_trjconv.c: In function 'calc_pbc_cluster': ../../../src/tools/gmx_trjconv.c:89:34: warning: unused variable 'is' [-Wunused-variable] int m,i,j,j0,j1,jj,ai,iter,is; ^ ../../../src/tools/gmx_trjconv.c: In function 'put_molecule_com_in_box': ../../../src/tools/gmx_trjconv.c:252:29: warning: unused variable 'dx' [-Wunused-variable] rvec com,new_com,shift,dx,box_center; ^ ../../../src/tools/gmx_trjconv.c: In function 'put_residue_com_in_box': ../../../src/tools/gmx_trjconv.c:303:37: warning: variable 'res_nat' set but not used [-Wunused-but-set-variable] atom_id i, j, res_start, res_end, res_nat; ^ ../../../src/tools/gmx_trjconv.c: In function 'gmx_trjconv': ../../../src/tools/gmx_trjconv.c:726:16: warning: unused variable 'xdr' [-Wunused-variable] int xdr=0; ^ ../../../src/tools/gmx_trjconv.c:725:42: warning: unused variable 'command' [-Wunused-variable] char top_title[256],title[256],command[256],filemode[5]; ^ ../../../src/tools/gmx_trjconv.c:715:21: warning: variable 'bFitXY' set but not used [-Wunused-but-set-variable] bool bFit,bFitXY,bPFit,bReset; ^ ../../../src/tools/gmx_trjconv.c:707:25: warning: unused variable 'gn_rms' [-Wunused-variable] char *gn_fit,*gn_rms; ^ ../../../src/tools/gmx_trjconv.c:706:26: warning: unused variable 'ind_rms' [-Wunused-variable] atom_id *ind_fit,*ind_rms; ^ ../../../src/tools/gmx_trjconv.c:705:21: warning: unused variable 'irms' [-Wunused-variable] int ifit,irms,my_clust=-1; ^ ../../../src/tools/gmx_trjconv.c:695:55: warning: unused variable 'nre' [-Wunused-variable] int m,i,d,frame,outframe,natoms,nout,ncent,nre,newstep=0,model_nr; ^ ../../../src/tools/gmx_trjconv.c:694:23: warning: unused variable 'lambda' [-Wunused-variable] real xtcpr, lambda,*w_rls=NULL; ^ ../../../src/tools/gmx_trjconv.c:694:16: warning: unused variable 'xtcpr' [-Wunused-variable] real xtcpr, lambda,*w_rls=NULL; ^ ../../../src/tools/gmx_trjconv.c:693:49: warning: unused variable 'dx' [-Wunused-variable] rvec *xp=NULL,x_shift,hbox,box_center,dx; ^ ../../../src/tools/gmx_trjconv.c:693:38: warning: unused variable 'box_center' [-Wunused-variable] rvec *xp=NULL,x_shift,hbox,box_center,dx; ^ In file included from ../../../src/tools/gmx_trjconv.c:47:0: ../../../src/tools/gmx_trjconv.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjconv.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_trjconv.c:53:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjconv.c:57: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjconv.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjorder.c -fPIC -DPIC -o .libs/gmx_trjorder.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjcat.c -fPIC -DPIC -o .libs/gmx_trjcat.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_xpm2ps.c -fPIC -DPIC -o .libs/gmx_xpm2ps.o ../../../src/tools/gmx_trjcat.c: In function 'scan_trj_files': ../../../src/tools/gmx_trjcat.c:78:8: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_trjcat.c: In function 'gmx_trjcat': ../../../src/tools/gmx_trjcat.c:392:58: warning: unused variable 'last_ok_step' [-Wunused-variable] int earliersteps,nfile_in,nfile_out,*cont_type,last_ok_step; ^ ../../../src/tools/gmx_trjcat.c:388:34: warning: unused variable 'in_file' [-Wunused-variable] char **fnms,**fnms_out,*in_file,*out_file; ^ ../../../src/tools/gmx_trjcat.c:385:19: warning: unused variable 'v' [-Wunused-variable] rvec *x,*v; ^ ../../../src/tools/gmx_trjcat.c:385:16: warning: unused variable 'x' [-Wunused-variable] rvec *x,*v; ^ ../../../src/tools/gmx_trjcat.c:384:53: warning: unused variable 'trjout' [-Wunused-variable] int status,ftpin,i,frame,frame_out,step=0,trjout=0; ^ ../../../src/tools/gmx_trjcat.c:384:22: warning: unused variable 'ftpin' [-Wunused-variable] int status,ftpin,i,frame,frame_out,step=0,trjout=0; ^ In file included from ../../../src/tools/gmx_trjcat.c:46:0: ../../../src/tools/gmx_trjcat.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjcat.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_trjcat.c:52:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjcat.c:56: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjcat.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_editconf.lo ../../../src/tools/gmx_editconf.c ../../../src/tools/gmx_xpm2ps.c: In function 'xpm_mat': ../../../src/tools/gmx_xpm2ps.c:559:14: warning: unused variable 'k' [-Wunused-variable] int i,j,k,x,y,col; ^ ../../../src/tools/gmx_xpm2ps.c:559:12: warning: unused variable 'j' [-Wunused-variable] int i,j,k,x,y,col; ^ ../../../src/tools/gmx_xpm2ps.c:558:10: warning: unused variable 'buf' [-Wunused-variable] char buf[100]; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'tick_spacing': ../../../src/tools/gmx_xpm2ps.c:599:18: warning: unused variable 'bFive' [-Wunused-variable] bool bTryAgain,bFive; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'ps_mat': ../../../src/tools/gmx_xpm2ps.c:644:12: warning: unused variable 'j' [-Wunused-variable] int i,j,x,y,col,leg=0; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'write_combined_matrix': ../../../src/tools/gmx_xpm2ps.c:919:14: warning: unused variable 'map' [-Wunused-variable] t_mapping *map=NULL; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'gmx_xpm2ps': ../../../src/tools/gmx_xpm2ps.c:1127:56: warning: unused variable 'bAdd' [-Wunused-variable] static bool bFrame=TRUE,bZeroLine=FALSE,bYonce=FALSE,bAdd=FALSE; ^ In file included from ../../../src/tools/gmx_xpm2ps.c:42:0: ../../../src/tools/gmx_xpm2ps.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_xpm2ps.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjorder.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjorder.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjorder.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_trjorder.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genbox.lo ../../../src/tools/gmx_genbox.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_editconf.c -fPIC -DPIC -o .libs/gmx_editconf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genbox.c -fPIC -DPIC -o .libs/gmx_genbox.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genion.lo ../../../src/tools/gmx_genion.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genconf.lo ../../../src/tools/gmx_genconf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genion.c -fPIC -DPIC -o .libs/gmx_genion.o ../../../src/tools/gmx_editconf.c: In function 'calc_geom': ../../../src/tools/gmx_editconf.c:103:12: warning: unused variable 'grpnames' [-Wunused-variable] char *grpnames; ^ ../../../src/tools/gmx_editconf.c: In function 'set_pdb_conf_bfac': ../../../src/tools/gmx_editconf.c:195:9: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genpr.lo ../../../src/tools/gmx_genpr.c ../../../src/tools/gmx_editconf.c: In function 'gmx_editconf': ../../../src/tools/gmx_editconf.c:518:35: warning: unused variable 'zcent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:29: warning: unused variable 'ycent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:23: warning: unused variable 'xcent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:20: warning: unused variable 'zs' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:17: warning: unused variable 'ys' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:14: warning: unused variable 'xs' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:516:38: warning: unused variable 'bCubic' [-Wunused-variable] bool bIndex,bSetSize,bSetAng,bCubic,bDist,bSetCenter; ^ ../../../src/tools/gmx_editconf.c:512:30: warning: unused variable 'tindex' [-Wunused-variable] atom_id *index,*sindex,*tindex; ^ ../../../src/tools/gmx_editconf.c:511:26: warning: unused variable 'tsize' [-Wunused-variable] int isize,ssize,tsize; ^ ../../../src/tools/gmx_editconf.c:456:33: warning: unused variable 'to_diam' [-Wunused-variable] static real dist=0.0,rbox=0.0,to_diam=0.0; ^ ../../../src/tools/gmx_editconf.c:456:24: warning: unused variable 'rbox' [-Wunused-variable] static real dist=0.0,rbox=0.0,to_diam=0.0; ^ In file included from ../../../src/tools/gmx_editconf.c:43:0: ../../../src/tools/gmx_editconf.c: At top level: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/tools/gmx_editconf.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_editconf.c:49: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_editconf.c:53: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_editconf.c:53:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_editconf.c:79:14: warning: 'pdbtp' defined but not used [-Wunused-variable] static char *pdbtp[epdbNR]={"ATOM ","HETATM"}; ^ ../../../src/tools/gmx_genbox.c: In function 'gmx_genbox': ../../../src/tools/gmx_genbox.c:665:11: warning: unused variable 'pbc' [-Wunused-variable] t_pbc pbc; ^ In file included from ../../../src/tools/gmx_genbox.c:47:0: ../../../src/tools/gmx_genbox.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_genbox.c:55: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genbox.c:55:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genbox.c:57: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genbox.c:61:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_eneconv.lo ../../../src/tools/gmx_eneconv.c ../../../src/tools/gmx_genion.c: In function 'insert_ion': ../../../src/tools/gmx_genion.c:72:8: warning: unused variable 'xei' [-Wunused-variable] rvec xei,dx; ^ ../../../src/tools/gmx_genion.c:70:29: warning: unused variable 'm' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ ../../../src/tools/gmx_genion.c:70:23: warning: unused variable 'wlast' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ ../../../src/tools/gmx_genion.c:70:16: warning: unused variable 'owater' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genconf.c -fPIC -DPIC -o .libs/gmx_genconf.o In file included from ../../../src/tools/gmx_genion.c:41:0: ../../../src/tools/gmx_genion.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genion.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genion.c:48:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/tools/gmx_genion.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genion.c:54:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genpr.c -fPIC -DPIC -o .libs/gmx_genpr.o In file included from ../../../src/tools/gmx_genconf.c:40:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genconf.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genconf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genconf.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_genconf.c:93:13: warning: 'move_x' defined but not used [-Wunused-function] static void move_x(int natoms,rvec x[],matrix box) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_eneconv.c -fPIC -DPIC -o .libs/gmx_eneconv.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genpr.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genpr.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_genpr.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genpr.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_vanhove.lo ../../../src/tools/gmx_vanhove.c ../../../src/tools/gmx_eneconv.c: In function 'gmx_eneconv': ../../../src/tools/gmx_eneconv.c:427:14: warning: unused variable 'ok' [-Wunused-variable] bool ok; ^ ../../../src/tools/gmx_eneconv.c:426:35: warning: unused variable 'chptr' [-Wunused-variable] char inputstring[STRLEN],*chptr; ^ ../../../src/tools/gmx_eneconv.c:426:14: warning: unused variable 'inputstring' [-Wunused-variable] char inputstring[STRLEN],*chptr; ^ ../../../src/tools/gmx_eneconv.c:425:42: warning: unused variable 't1' [-Wunused-variable] real *readtime,*settime,timestep,t1,tadjust; ^ ../../../src/tools/gmx_eneconv.c:421:42: warning: unused variable 'j' [-Wunused-variable] int nre,nremax,this_nre,nfile,i,j,kkk,nset,*set=NULL; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_eneconv.c:45: ../../../src/tools/gmx_eneconv.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_eneconv.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_eneconv.c:101:13: warning: 'same_time' defined but not used [-Wunused-function] static bool same_time(real t1,real t2) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wheel.lo ../../../src/tools/gmx_wheel.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o addconf.lo ../../../src/tools/addconf.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcpot.lo ../../../src/tools/calcpot.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_vanhove.c -fPIC -DPIC -o .libs/gmx_vanhove.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o edittop.lo ../../../src/tools/edittop.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_dssp.o ../../../src/tools/do_dssp.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_vanhove.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_vanhove.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_vanhove.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_vanhove.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_wheel.c -fPIC -DPIC -o .libs/gmx_wheel.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/addconf.c -fPIC -DPIC -o .libs/addconf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/calcpot.c -fPIC -DPIC -o .libs/calcpot.o ../../../src/tools/do_dssp.c: In function 'main': ../../../src/tools/do_dssp.c:347:16: warning: unused variable 'j' [-Wunused-variable] int i,j,natoms,nframe=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/do_dssp.c:47: ../../../src/tools/do_dssp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/do_dssp.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/do_dssp.c:49:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/edittop.c -fPIC -DPIC -o .libs/edittop.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o editconf.o ../../../src/tools/editconf.c ../../../src/tools/addconf.c: In function 'do_nsgrid': ../../../src/tools/addconf.c:205:14: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ ../../../src/tools/addconf.c: In function 'add_conf': ../../../src/tools/addconf.c:328:23: warning: unused variable 'xpp' [-Wunused-variable] rvec dx,xi,xj,xpp,*x_all,*v_all; ^ ../../../src/tools/addconf.c:326:34: warning: unused variable 'dz1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:30: warning: unused variable 'dz0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:26: warning: unused variable 'dy1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:22: warning: unused variable 'dy0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:18: warning: unused variable 'dx1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:14: warning: unused variable 'dx0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:325:44: warning: unused variable 'maxincell' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:37: warning: unused variable 'ncells' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:35: warning: unused variable 'k' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:33: warning: unused variable 'd' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:19: warning: unused variable 'resnr' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:324:47: warning: unused variable 'iprot' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:324:21: warning: unused variable 'm' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:324:18: warning: unused variable 'jj' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:322:47: warning: unused variable 'ib2' [-Wunused-variable] real max_vdw,*r_prot,*r_all,n2,r2,ib1,ib2; ^ ../../../src/tools/addconf.c:322:43: warning: unused variable 'ib1' [-Wunused-variable] real max_vdw,*r_prot,*r_all,n2,r2,ib1,ib2; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/addconf.c:42: ../../../src/tools/addconf.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/addconf.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/addconf.c:46:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/addconf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/addconf.c:70:13: warning: 'set_margin' defined but not used [-Wunused-function] static void set_margin(t_atoms *atoms, rvec *x, real *r) ^ ../../../src/tools/calcpot.c: In function 'c_tabpot': ../../../src/tools/calcpot.c:79:8: warning: unused variable 'qqO' [-Wunused-variable] real qqO,qj; ^ ../../../src/tools/calcpot.c:78:43: warning: unused variable 'rinv2O' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:24: warning: unused variable 'fsO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:20: warning: unused variable 'vcO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:16: warning: unused variable 'tzO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:12: warning: unused variable 'tyO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:8: warning: unused variable 'txO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:76:28: warning: unused variable 'fzO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:24: warning: unused variable 'fyO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:20: warning: unused variable 'fxO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:16: warning: unused variable 'fzJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:12: warning: unused variable 'fyJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:8: warning: unused variable 'fxJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:75:38: warning: unused variable 'ggid' [-Wunused-variable] int ii,k,n,jnr,ii3,nj0,nj1,is3,j3,ggid; ^ ../../../src/tools/calcpot.c:71:50: warning: unused variable 'FF' [-Wunused-variable] real r1,r1t,fijC,eps,eps2,Y,F,Fp,Geps,Heps2,VV,FF; ^ ../../../src/tools/calcpot.c:71:15: warning: unused variable 'fijC' [-Wunused-variable] real r1,r1t,fijC,eps,eps2,Y,F,Fp,Geps,Heps2,VV,FF; ^ ../../../src/tools/calcpot.c:70:14: warning: unused variable 'two' [-Wunused-variable] const real two = 2.000000; ^ ../../../src/tools/calcpot.c: In function 'calc_pot': ../../../src/tools/calcpot.c:176:15: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_wheel.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_wheel.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_wheel.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_wheel.c:55: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/calcpot.c: In function 'init_calcpot': ../../../src/tools/calcpot.c:238:12: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/calcpot.c:40: ../../../src/tools/calcpot.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/calcpot.c:40:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/calcpot.c:46:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eneconv.o ../../../src/tools/eneconv.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genbox.o ../../../src/tools/genbox.c ../../../src/tools/edittop.c: In function 'delete_from_block': ../../../src/tools/edittop.c:104:17: warning: unused variable 'k' [-Wunused-variable] int i,i1,j1,j,k; ^ ../../../src/tools/edittop.c:104:12: warning: unused variable 'j1' [-Wunused-variable] int i,i1,j1,j,k; ^ ../../../src/tools/edittop.c: In function 'delete_atom': ../../../src/tools/edittop.c:161:7: warning: unused variable 'k' [-Wunused-variable] int k; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genconf.o ../../../src/tools/genconf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genrestr.o ../../../src/tools/genrestr.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmtraj.o ../../../src/tools/g_nmtraj.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o make_ndx.o ../../../src/tools/make_ndx.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mk_angndx.o ../../../src/tools/mk_angndx.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjcat.o ../../../src/tools/trjcat.c In file included from ../../../src/tools/mk_angndx.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/mk_angndx.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjconv.o ../../../src/tools/trjconv.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjorder.o ../../../src/tools/trjorder.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wheel.o ../../../src/tools/wheel.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xpm2ps.o ../../../src/tools/xpm2ps.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genion.o ../../../src/tools/genion.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o anadock.o ../../../src/tools/anadock.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o make_edi.o ../../../src/tools/make_edi.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_analyze.o ../../../src/tools/g_analyze.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/make_ndx.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/make_ndx.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/make_ndx.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/make_ndx.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_anaeig.o ../../../src/tools/g_anaeig.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_angle.o ../../../src/tools/g_angle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_bond.o ../../../src/tools/g_bond.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_bundle.o ../../../src/tools/g_bundle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_chi.o ../../../src/tools/g_chi.c ../../../src/tools/make_edi.c: In function 'main': ../../../src/tools/make_edi.c:640:10: warning: variable 'bTop' set but not used [-Wunused-but-set-variable] bool bTop, bFit1; ^ In file included from ../../../src/tools/make_edi.c:43:0: ../../../src/tools/make_edi.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/make_edi.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/make_edi.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/make_edi.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/make_edi.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_cluster.o ../../../src/tools/g_cluster.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_confrms.o ../../../src/tools/g_confrms.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_covar.o ../../../src/tools/g_covar.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_current.o ../../../src/tools/g_current.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_density.o ../../../src/tools/g_density.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_densmap.o ../../../src/tools/g_densmap.c ../../../src/tools/anadock.c: In function 'rmsd_dist': ../../../src/tools/anadock.c:197:13: warning: variable 'dist' set but not used [-Wunused-but-set-variable] real rmsd,dist; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dih.o ../../../src/tools/g_dih.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dielectric.o ../../../src/tools/g_dielectric.c In file included from ../../../src/tools/anadock.c:41:0: ../../../src/tools/anadock.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/anadock.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_helixorient.o ../../../src/tools/g_helixorient.c In file included from ../../../src/tools/anadock.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/anadock.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_principal.o ../../../src/tools/g_principal.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dipoles.o ../../../src/tools/g_dipoles.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_disre.o ../../../src/tools/g_disre.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dist.o ../../../src/tools/g_dist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dyndom.o ../../../src/tools/g_dyndom.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_enemat.o ../../../src/tools/g_enemat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_energy.o ../../../src/tools/g_energy.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_lie.o ../../../src/tools/g_lie.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_filter.o ../../../src/tools/g_filter.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_gyrate.o ../../../src/tools/g_gyrate.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_h2order.o ../../../src/tools/g_h2order.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_hbond.o ../../../src/tools/g_hbond.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_helix.o ../../../src/tools/g_helix.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_mindist.o ../../../src/tools/g_mindist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_msd.o ../../../src/tools/g_msd.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_morph.o ../../../src/tools/g_morph.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmeig.o ../../../src/tools/g_nmeig.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmens.o ../../../src/tools/g_nmens.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_order.o ../../../src/tools/g_order.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_polystat.o ../../../src/tools/g_polystat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_potential.o ../../../src/tools/g_potential.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rama.o ../../../src/tools/g_rama.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rdf.o ../../../src/tools/g_rdf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rms.o ../../../src/tools/g_rms.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rmsdist.o ../../../src/tools/g_rmsdist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rmsf.o ../../../src/tools/g_rmsf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rotacf.o ../../../src/tools/g_rotacf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_saltbr.o ../../../src/tools/g_saltbr.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sas.o ../../../src/tools/g_sas.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sgangle.o ../../../src/tools/g_sgangle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sham.o ../../../src/tools/g_sham.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sorient.o ../../../src/tools/g_sorient.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_spol.o ../../../src/tools/g_spol.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sdf.o ../../../src/tools/g_sdf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_spatial.o ../../../src/tools/g_spatial.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_tcaf.o ../../../src/tools/g_tcaf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_traj.o ../../../src/tools/g_traj.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_vanhove.o ../../../src/tools/g_vanhove.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_velacc.o ../../../src/tools/g_velacc.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_clustsize.o ../../../src/tools/g_clustsize.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_mdmat.o ../../../src/tools/g_mdmat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_wham.o ../../../src/tools/g_wham.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_kinetics.o ../../../src/tools/g_kinetics.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sigeps.o ../../../src/tools/sigeps.c /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o libgmxana_mpi.la -rpath /usr/lib64 autocorr.lo expfit.lo polynomials.lo levenmar.lo anadih.lo pp2shift.lo dlist.lo eigio.lo lsq.lo cmat.lo eigensolver.lo nsc.lo hxprops.lo fitahx.lo gmx_analyze.lo gmx_anaeig.lo gmx_angle.lo gmx_bond.lo gmx_bundle.lo gmx_chi.lo gmx_cluster.lo gmx_confrms.lo gmx_covar.lo gmx_current.lo gmx_density.lo gmx_densmap.lo gmx_dih.lo gmx_dielectric.lo gmx_kinetics.lo gmx_spatial.lo gmx_dipoles.lo gmx_disre.lo gmx_dist.lo gmx_dyndom.lo gmx_enemat.lo gmx_energy.lo gmx_lie.lo gmx_filter.lo gmx_gyrate.lo gmx_h2order.lo gmx_hbond.lo gmx_helix.lo gmx_mindist.lo gmx_msd.lo gmx_morph.lo gmx_nmeig.lo gmx_nmens.lo gmx_order.lo gmx_principal.lo gmx_polystat.lo gmx_potential.lo gmx_rama.lo gmx_rdf.lo gmx_rms.lo gmx_rmsdist.lo gmx_rmsf.lo gmx_rotacf.lo gmx_saltbr.lo gmx_sas.lo gmx_sdf.lo gmx_sgangle.lo gmx_sorient.lo gmx_spol.lo gmx_tcaf.lo gmx_traj.lo gmx_velacc.lo gmx_helixorient.lo gmx_clustsize.lo gmx_mdmat.lo gmx_wham.lo correl.lo gmx_sham.lo gmx_nmtraj.lo gmx_trjconv.lo gmx_trjcat.lo gmx_trjorder.lo gmx_xpm2ps.lo gmx_editconf.lo gmx_genbox.lo gmx_genion.lo gmx_genconf.lo gmx_genpr.lo gmx_eneconv.lo gmx_vanhove.lo gmx_wheel.lo addconf.lo calcpot.lo edittop.lo ../gmxlib/libgmx_mpi.la ../mdlib/libmd_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte ../../../src/tools/sigeps.c: In function 'main': ../../../src/tools/sigeps.c:106:42: warning: unused variable 'pp' [-Wunused-variable] real qq,x,oldx,minimum,mval,dp[2],pp[2]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/sigeps.c:43: ../../../src/tools/sigeps.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/sigeps.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/sigeps.c:47:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/sigeps.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/sigeps.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -shared .libs/autocorr.o .libs/expfit.o .libs/polynomials.o .libs/levenmar.o .libs/anadih.o .libs/pp2shift.o .libs/dlist.o .libs/eigio.o .libs/lsq.o .libs/cmat.o .libs/eigensolver.o .libs/nsc.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_analyze.o .libs/gmx_anaeig.o .libs/gmx_angle.o .libs/gmx_bond.o .libs/gmx_bundle.o .libs/gmx_chi.o .libs/gmx_cluster.o .libs/gmx_confrms.o .libs/gmx_covar.o .libs/gmx_current.o .libs/gmx_density.o .libs/gmx_densmap.o .libs/gmx_dih.o .libs/gmx_dielectric.o .libs/gmx_kinetics.o .libs/gmx_spatial.o .libs/gmx_dipoles.o .libs/gmx_disre.o .libs/gmx_dist.o .libs/gmx_dyndom.o .libs/gmx_enemat.o .libs/gmx_energy.o .libs/gmx_lie.o .libs/gmx_filter.o .libs/gmx_gyrate.o .libs/gmx_h2order.o .libs/gmx_hbond.o .libs/gmx_helix.o .libs/gmx_mindist.o .libs/gmx_msd.o .libs/gmx_morph.o .libs/gmx_nmeig.o .libs/gmx_nmens.o .libs/gmx_order.o .libs/gmx_principal.o .libs/gmx_polystat.o .libs/gmx_potential.o .libs/gmx_rama.o .libs/gmx_rdf.o .libs/gmx_rms.o .libs/gmx_rmsdist.o .libs/gmx_rmsf.o .libs/gmx_rotacf.o .libs/gmx_saltbr.o .libs/gmx_sas.o .libs/gmx_sdf.o .libs/gmx_sgangle.o .libs/gmx_sorient.o .libs/gmx_spol.o .libs/gmx_tcaf.o .libs/gmx_traj.o .libs/gmx_velacc.o .libs/gmx_helixorient.o .libs/gmx_clustsize.o .libs/gmx_mdmat.o .libs/gmx_wham.o .libs/correl.o .libs/gmx_sham.o .libs/gmx_nmtraj.o .libs/gmx_trjconv.o .libs/gmx_trjcat.o .libs/gmx_trjorder.o .libs/gmx_xpm2ps.o .libs/gmx_editconf.o .libs/gmx_genbox.o .libs/gmx_genion.o .libs/gmx_genconf.o .libs/gmx_genpr.o .libs/gmx_eneconv.o .libs/gmx_vanhove.o .libs/gmx_wheel.o .libs/addconf.o .libs/calcpot.o .libs/edittop.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/lib64/openmpi/lib ../gmxlib/.libs/libgmx_mpi.so ../mdlib/.libs/libmd_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-Rpath:/usr/lib64/openmpi/lib -Wl,-soname -Wl,libgmxana_mpi.so.5 -o .libs/libgmxana_mpi.so.5.0.0 (cd .libs && rm -f libgmxana_mpi.so.5 && ln -s libgmxana_mpi.so.5.0.0 libgmxana_mpi.so.5) (cd .libs && rm -f libgmxana_mpi.so && ln -s libgmxana_mpi.so.5.0.0 libgmxana_mpi.so) creating libgmxana_mpi.la (cd .libs && rm -f libgmxana_mpi.la && ln -s ../libgmxana_mpi.la libgmxana_mpi.la) /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o do_dssp do_dssp.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o editconf editconf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_editconf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o eneconv eneconv.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_eneconv.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genbox genbox.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/addconf.o .libs/gmx_genbox.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genconf genconf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_genconf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genrestr genrestr.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_genpr.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmtraj g_nmtraj.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/eigio.o .libs/gmx_nmtraj.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o make_ndx make_ndx.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/eneconv eneconv.o .libs/gmx_eneconv.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genbox genbox.o .libs/addconf.o .libs/gmx_genbox.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genrestr genrestr.o .libs/gmx_genpr.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/do_dssp do_dssp.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genconf genconf.o .libs/gmx_genconf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmtraj g_nmtraj.o .libs/eigio.o .libs/gmx_nmtraj.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/make_ndx make_ndx.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating genbox creating genrestr creating eneconv DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/editconf editconf.o .libs/gmx_editconf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o mk_angndx mk_angndx.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjcat trjcat.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_trjcat.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjconv trjconv.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_trjconv.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating do_dssp /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjorder trjorder.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_trjorder.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating editconf creating g_nmtraj creating genconf /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o wheel wheel.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_wheel.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o xpm2ps xpm2ps.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_xpm2ps.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating make_ndx /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genion genion.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/calcpot.o .libs/gmx_genion.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o anadock anadock.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/lsq.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjcat trjcat.o .libs/gmx_trjcat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjconv trjconv.o .libs/gmx_trjconv.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/mk_angndx mk_angndx.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjorder trjorder.o .libs/gmx_trjorder.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/xpm2ps xpm2ps.o .libs/gmx_xpm2ps.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating trjcat DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/anadock anadock.o .libs/lsq.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating mk_angndx /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o make_edi make_edi.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/eigio.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_analyze g_analyze.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o .libs/gmx_analyze.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/wheel wheel.o .libs/gmx_wheel.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating trjconv DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genion genion.o .libs/calcpot.o .libs/gmx_genion.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating anadock /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_anaeig g_anaeig.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/eigio.o .libs/gmx_anaeig.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_angle g_angle.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_angle.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating trjorder creating xpm2ps /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_bond g_bond.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/lsq.o .libs/gmx_bond.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating wheel /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_bundle g_bundle.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_bundle.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_chi g_chi.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/pp2shift.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_chi.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating genion /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_cluster g_cluster.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/eigensolver.o .libs/cmat.o .libs/gmx_cluster.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_analyze g_analyze.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o .libs/gmx_analyze.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/make_edi make_edi.o .libs/eigio.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_anaeig g_anaeig.o .libs/eigio.o .libs/gmx_anaeig.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_bond g_bond.o .libs/lsq.o .libs/gmx_bond.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating make_edi /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_confrms g_confrms.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_confrms.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_angle g_angle.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_angle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_analyze DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_bundle g_bundle.o .libs/gmx_bundle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_covar g_covar.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_covar.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_chi g_chi.o .libs/pp2shift.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_chi.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_anaeig DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_cluster g_cluster.o .libs/eigensolver.o .libs/cmat.o .libs/gmx_cluster.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_current g_current.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_current.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_angle creating g_bond /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_density g_density.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_density.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_bundle /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_densmap g_densmap.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_densmap.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dih g_dih.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_dih.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_chi /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dielectric g_dielectric.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dielectric.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_cluster /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_helixorient g_helixorient.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_helixorient.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dih g_dih.o .libs/gmx_dih.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_density g_density.o .libs/gmx_density.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_confrms g_confrms.o .libs/gmx_confrms.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_current g_current.o .libs/gmx_current.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_covar g_covar.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_covar.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_densmap g_densmap.o .libs/gmx_densmap.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dielectric g_dielectric.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dielectric.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_density creating g_dih creating g_covar /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_principal g_principal.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_principal.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_current DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_helixorient g_helixorient.o .libs/gmx_helixorient.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dipoles g_dipoles.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/lsq.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dipoles.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_confrms /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_disre g_disre.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_disre.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dist g_dist.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_dist.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_densmap /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dyndom g_dyndom.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_dyndom.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_dielectric /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_enemat g_enemat.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_enemat.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_energy g_energy.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_energy.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_helixorient /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_lie g_lie.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_lie.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_principal g_principal.o .libs/gmx_principal.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dipoles g_dipoles.o .libs/lsq.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dipoles.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dyndom g_dyndom.o .libs/gmx_dyndom.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_disre g_disre.o .libs/gmx_disre.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_principal DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_enemat g_enemat.o .libs/gmx_enemat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dist g_dist.o .libs/gmx_dist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_energy g_energy.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_energy.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_filter g_filter.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_filter.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_disre DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_lie g_lie.o .libs/gmx_lie.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_dipoles creating g_dyndom /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_gyrate g_gyrate.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_gyrate.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_h2order g_h2order.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_h2order.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_hbond g_hbond.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_enemat creating g_dist creating g_energy /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_helix g_helix.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/hxprops.o .libs/fitahx.o .libs/gmx_helix.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_lie /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_mindist g_mindist.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_mindist.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_msd g_msd.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/lsq.o .libs/gmx_msd.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_morph g_morph.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_morph.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_filter g_filter.o .libs/gmx_filter.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_gyrate g_gyrate.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_gyrate.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_filter creating g_gyrate /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmeig g_nmeig.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmeig.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmens g_nmens.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmens.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_h2order g_h2order.o .libs/gmx_h2order.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_hbond g_hbond.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_helix g_helix.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_helix.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_mindist g_mindist.o .libs/gmx_mindist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_morph g_morph.o .libs/gmx_morph.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_msd g_msd.o .libs/lsq.o .libs/gmx_msd.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_mindist creating g_morph /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_order g_order.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_order.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_polystat g_polystat.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_polystat.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_msd /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_potential g_potential.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_potential.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_h2order /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rama g_rama.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_rama.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_helix /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rdf g_rdf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rdf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_hbond /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rms g_rms.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/cmat.o .libs/gmx_rms.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmeig g_nmeig.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmeig.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmens g_nmens.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmens.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_nmeig DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_polystat g_polystat.o .libs/gmx_polystat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rmsdist g_rmsdist.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_rmsdist.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_order g_order.o .libs/gmx_order.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_nmens creating g_polystat /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rmsf g_rmsf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/eigensolver.o .libs/gmx_rmsf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_potential g_potential.o .libs/gmx_potential.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rotacf g_rotacf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rotacf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_order DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rama g_rama.o .libs/gmx_rama.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_saltbr g_saltbr.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_saltbr.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rdf g_rdf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rdf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_potential creating g_rama /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sas g_sas.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/nsc.o .libs/gmx_sas.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sgangle g_sgangle.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_sgangle.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_rdf DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rms g_rms.o .libs/cmat.o .libs/gmx_rms.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sham g_sham.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_sham.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_rms /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sorient g_sorient.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_sorient.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rmsdist g_rmsdist.o .libs/gmx_rmsdist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rotacf g_rotacf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rotacf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rmsf g_rmsf.o .libs/eigensolver.o .libs/gmx_rmsf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rmsdist /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_spol g_spol.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_spol.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_saltbr g_saltbr.o .libs/gmx_saltbr.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rmsf creating g_rotacf /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sdf g_sdf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_sdf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sas g_sas.o .libs/nsc.o .libs/gmx_sas.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_spatial g_spatial.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_spatial.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sgangle g_sgangle.o .libs/gmx_sgangle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sham g_sham.o .libs/gmx_sham.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_sgangle /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_tcaf g_tcaf.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_tcaf.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_saltbr /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_traj g_traj.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_traj.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sorient g_sorient.o .libs/gmx_sorient.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_sas creating g_sorient /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_vanhove g_vanhove.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_vanhove.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_velacc g_velacc.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_velacc.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_sham /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_clustsize g_clustsize.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_clustsize.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_spol g_spol.o .libs/gmx_spol.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sdf g_sdf.o .libs/gmx_sdf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_spol /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_mdmat g_mdmat.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_mdmat.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_spatial g_spatial.o .libs/gmx_spatial.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_tcaf g_tcaf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_tcaf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_sdf creating g_spatial /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_wham g_wham.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_wham.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_kinetics g_kinetics.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la .libs/gmx_kinetics.o -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_traj g_traj.o .libs/gmx_traj.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_tcaf /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o sigeps sigeps.o libgmxana_mpi.la ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte creating g_traj DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_vanhove g_vanhove.o .libs/gmx_vanhove.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_clustsize g_clustsize.o .libs/gmx_clustsize.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_velacc g_velacc.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_velacc.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_vanhove creating g_clustsize creating g_velacc DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_mdmat g_mdmat.o .libs/gmx_mdmat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_mdmat DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_wham g_wham.o .libs/gmx_wham.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_kinetics g_kinetics.o .libs/gmx_kinetics.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/sigeps sigeps.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi.so ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_wham creating sigeps creating g_kinetics make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/tools' Making all in ngmx make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/ngmx' mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ngmx.o ../../../src/ngmx/ngmx.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xutil.o ../../../src/ngmx/xutil.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xmb.o ../../../src/ngmx/xmb.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o x11.o ../../../src/ngmx/x11.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlghi.o ../../../src/ngmx/xdlghi.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fgrid.o ../../../src/ngmx/fgrid.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlgitem.o ../../../src/ngmx/xdlgitem.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o popup.o ../../../src/ngmx/popup.c ../../../src/ngmx/fgrid.c: In function 'GetBuf': ../../../src/ngmx/fgrid.c:101:7: warning: variable 'rc' set but not used [-Wunused-but-set-variable] int rc; ^ ../../../src/ngmx/fgrid.c: In function 'FGridFromFile': ../../../src/ngmx/fgrid.c:346:8: warning: unused variable 'newinfile' [-Wunused-variable] char newinfile[STRLEN]; ^ ../../../src/ngmx/fgrid.c:345:9: warning: unused variable 'gmxlib' [-Wunused-variable] char *gmxlib; ^ ../../../src/ngmx/x11.c:132:13: warning: 'TestEvent' defined but not used [-Wunused-function] static Bool TestEvent(Display *disp,XEvent *event,char *arg) ^ ../../../src/ngmx/x11.c:265:13: warning: 'Xrm' defined but not used [-Wunused-function] static void Xrm(int *argc, char *argv[]) ^ ../../../src/ngmx/ngmx.c: In function 'dump_xw': ../../../src/ngmx/ngmx.c:68:8: warning: variable 'rc' set but not used [-Wunused-but-set-variable] int rc; ^ ../../../src/ngmx/ngmx.c: In function 'init_gmx': ../../../src/ngmx/ngmx.c:354:35: warning: unused variable 'nre' [-Wunused-variable] int step,natom,nre,natom_trx; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/ngmx.c:49: ../../../src/ngmx/ngmx.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/ngmx/ngmx.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/ngmx/ngmx.c:65:13: warning: 'dump_xw' defined but not used [-Wunused-function] static void dump_xw(char *dispname,Window w,char *fn) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pulldown.o ../../../src/ngmx/pulldown.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlg.o ../../../src/ngmx/xdlg.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o manager.o ../../../src/ngmx/manager.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o buttons.o ../../../src/ngmx/buttons.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nmol.o ../../../src/ngmx/nmol.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nleg.o ../../../src/ngmx/nleg.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dialogs.o ../../../src/ngmx/dialogs.c ../../../src/ngmx/nmol.c: In function 'draw_box': ../../../src/ngmx/nmol.c:422:23: warning: unused variable 'tv2' [-Wunused-variable] iv2 vec2[NCUCEDGE],tv2; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/ngmx/nmol.c:51: ../../../src/ngmx/nmol.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/ngmx/nmol.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o logo.o ../../../src/ngmx/logo.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o filter.o ../../../src/ngmx/filter.c In file included from ../../../src/ngmx/logo.c:45:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o molps.o ../../../src/ngmx/molps.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xrama.o ../../../src/ngmx/xrama.c ../../../src/ngmx/molps.c: In function 'ps_draw_mol': ../../../src/ngmx/molps.c:204:15: warning: unused variable 'ntime' [-Wunused-variable] static int ntime=0; ^ ../../../src/ngmx/molps.c:203:15: warning: unused variable 'tstr' [-Wunused-variable] static char tstr[2][20]; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o highway.o ../../../src/ngmx/highway.c ../../../src/ngmx/manager.c: In function 'set_file': ../../../src/ngmx/manager.c:182:18: warning: unused variable 'idum' [-Wunused-variable] int i,idum; ^ ../../../src/ngmx/manager.c: In function 'step_man': ../../../src/ngmx/manager.c:312:15: warning: unused variable 'dum' [-Wunused-variable] int dum; ^ ../../../src/ngmx/manager.c:311:15: warning: unused variable 'rdum' [-Wunused-variable] real rdum; ^ In file included from ../../../src/ngmx/manager.c:48:0: ../../../src/ngmx/manager.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/ngmx/manager.c:55:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/ngmx/manager.c:56: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/ngmx/manager.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/ngmx/dialogs.c:240:13: warning: 'Extract' defined but not used [-Wunused-function] static void Extract(t_dlg *dlg,int ID,char *buf) ^ ../../../src/ngmx/dialogs.c:373:13: warning: 'in_set' defined but not used [-Wunused-function] static bool in_set(int i,int n,int set[]) ^ In file included from ../../../src/ngmx/highway.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/highway.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/ngmx/xrama.c: In function 'main': ../../../src/ngmx/xrama.c:319:15: warning: variable 'ramatop' set but not used [-Wunused-but-set-variable] t_topology *ramatop; ^ In file included from ../../../src/ngmx/xrama.c:44:0: ../../../src/ngmx/xrama.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/xrama.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o xrama xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o highway highway.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_mpi.la ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath mkdir .libs DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/highway highway.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/xrama xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd_mpi.so ../gmxlib/.libs/libgmx_mpi.so -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath creating ngmx creating highway creating xrama make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/ngmx' Making all in contrib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/contrib' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/contrib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' Making all in admin make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/admin' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/admin' Making all in scripts make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/scripts' cat ../../scripts/GMXRC.in | sed 's,@bindir\@,/usr/bin,' > GMXRC cat ../../scripts/GMXRC.csh.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.csh cat ../../scripts/GMXRC.bash.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.bash cat ../../scripts/GMXRC.zsh.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.zsh make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/scripts' Making all in share make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' Making all in top make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/top' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/top' Making all in tutor make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' Making all in nmr1 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr1' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr1' Making all in nmr2 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr2' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr2' Making all in speptide make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/speptide' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/speptide' Making all in water make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/water' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/water' Making all in gmxdemo make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/gmxdemo' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/gmxdemo' Making all in methanol make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/methanol' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/methanol' Making all in mixed make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/mixed' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/mixed' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' Making all in template make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/template' cat ../../../share/template/Template.mak | \ sed 's,@LDFLAGS\@,-L/usr/lib64 -lgslcblas ,' | \ sed 's,@LIBS\@,-lmd_mpi -lgmx_mpi -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ,' | \ sed 's,@CFLAGS\@,-g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -I/usr/include -I/usr/include/gromacs,' | \ sed 's,@CC\@,mpicc,' | \ sed 's,@host\@,x86_64-alt-linux-gnu,' >Makefile.x86_64-alt-linux-gnu sed: -e expression #1, char 36: unknown option to `s' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/template' Making all in html make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' Making all in . make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' Making all in images make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/images' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/images' Making all in online make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/online' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/online' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' Making all in man make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' Making all in man1 make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man/man1' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man/man1' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' make[1]: Nothing to be done for `all-am'. make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' make: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' + popd ~/RPM/BUILD/gromacs-4.0.7 + mkdir mpi-double + pushd mpi-double ~/RPM/BUILD/gromacs-4.0.7/mpi-double ~/RPM/BUILD/gromacs-4.0.7 + buildThis double enable _mpi_d + ln -s ../configure . + CFLAGS='-pipe -Wall -g -O2' + export CFLAGS + CXXFLAGS='-pipe -Wall -g -O2' + export CXXFLAGS + FFLAGS='-pipe -Wall -g -O2' + export FFLAGS + '[' -n '' ']' ++ printf %s '-pipe -Wall -g -O2' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS= + export ASFLAGS + export lt_cv_prog_cc_static_works=no + lt_cv_prog_cc_static_works=no + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + ./configure --build=x86_64-alt-linux --host=x86_64-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --without-included-gettext --disable-rpath --enable-static=no --enable-shared --enable-double --enable-mpi --enable-prefetch-forces --enable-fortran --with-gnu-ld --with-fft=fftw3 --with-x --with-gsl --enable-mpi --program-suffix=_mpi_d --with-external-blas=-lopenblas configure: WARNING: unrecognized options: --without-included-gettext, --disable-rpath, --enable-prefetch-forces checking build system type... x86_64-alt-linux-gnu checking host system type... x86_64-alt-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '646' is supported by ustar format... yes checking whether GID '646' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking for x86_64-alt-linux-cc... no checking for x86_64-alt-linux-icc... no checking for x86_64-alt-linux-xlc... no checking for x86_64-alt-linux-gcc... x86_64-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-alt-linux-gcc accepts -g... yes checking for x86_64-alt-linux-gcc option to accept ISO C89... none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of x86_64-alt-linux-gcc... none checking for x86_64-alt-linux-f77... no checking for x86_64-alt-linux-ifort... no checking for x86_64-alt-linux-xlf... no checking for x86_64-alt-linux-xlf77... no checking for x86_64-alt-linux-cf77... no checking for x86_64-alt-linux-fl32... no checking for x86_64-alt-linux-g77... no checking for x86_64-alt-linux-fort77... no checking for x86_64-alt-linux-f90... no checking for x86_64-alt-linux-xlf90... no checking for x86_64-alt-linux-pgf77... no checking for x86_64-alt-linux-cf77... no checking for x86_64-alt-linux-fort... no checking for x86_64-alt-linux-fort77... no checking for x86_64-alt-linux-pgf90... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking dependency style of x86_64-alt-linux-gcc... none checking for mpxlc... no checking for mpicc... mpicc checking whether the MPI cc command works... yes checking for catamount... no checking how to get verbose linking output from f77... -v checking for Fortran 77 libraries of f77... -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking how to run the C preprocessor... mpicc -E checking whether mpicc accepts -O3... yes checking whether mpicc accepts -funroll-all-loops... yes ****************************************** * Using CFLAGS from environment variable * ****************************************** ****************************************** * Using FFLAGS from environment variable * ****************************************** checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking size of int... 4 checking size of long int... 8 checking size of long long int... 8 checking size of off_t... 8 checking that size_t can hold pointers... yes checking floating-point format... IEEE754 (little-endian byte and word order) checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for a sed that does not truncate output... /bin/sed checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for /usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking how to recognise dependent libraries... (cached) pass_all checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking for x86_64-alt-linux-g++... x86_64-alt-linux-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-alt-linux-g++ accepts -g... yes checking dependency style of x86_64-alt-linux-g++... none checking how to run the C++ preprocessor... x86_64-alt-linux-g++ -E checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for objdir... .libs checking for x86_64-alt-linux-ar... no checking for ar... ar checking for x86_64-alt-linux-ranlib... no checking for ranlib... ranlib checking for x86_64-alt-linux-strip... no checking for strip... strip checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC checking if mpicc PIC flag -fPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by x86_64-alt-linux-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-alt-linux-g++ option to produce PIC... -fPIC checking if x86_64-alt-linux-g++ PIC flag -fPIC works... yes checking if x86_64-alt-linux-g++ static flag -static works... no checking if x86_64-alt-linux-g++ supports -c -o file.o... yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 static flag -static works... no checking if f77 supports -c -o file.o... yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: '/etc/ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for sqrt in -lm... yes checking for fftw3.h... yes checking for main in -lfftw3... yes checking rpc/rpc.h usability... yes checking rpc/rpc.h presence... yes checking for rpc/rpc.h... yes checking for rpc/xdr.h... yes checking for xdr_float in -lnsl... yes checking for working memcmp... yes checking return type of signal handlers... void checking for off_t... yes checking for vprintf... yes checking for _doprnt... no checking if malloc debugging is wanted... no checking for strcasecmp... yes checking for strdup... yes checking for bool... no checking size of int... (cached) 4 checking size of long int... (cached) 8 checking size of long long int... (cached) 8 checking size of off_t... (cached) 8 checking size of void*... 8 checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking gsl/gsl_version.h usability... yes checking gsl/gsl_version.h presence... yes checking for gsl/gsl_version.h... yes checking for main in -lgslcblas... yes checking for main in -lgsl... yes checking libxml/parser.h usability... no checking libxml/parser.h presence... no checking for libxml/parser.h... no checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for inline... inline checking whether your compiler can handle assembly files (*.s)... yes checking whether as fully supports X86_64 SSE2... yes checking whether byte ordering is bigendian... (cached) no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/gmxlib/Makefile config.status: creating src/gmxlib/gmx_blas/Makefile config.status: creating src/gmxlib/gmx_lapack/Makefile config.status: creating src/gmxlib/nonbonded/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_3dnow/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia32_sse2/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ppc_altivec/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_single/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_ia64_double/Makefile config.status: creating src/gmxlib/nonbonded/nb_kernel_bluegene/Makefile config.status: creating include/Makefile config.status: creating include/types/Makefile config.status: creating src/mdlib/Makefile config.status: creating src/kernel/Makefile config.status: creating src/tools/Makefile config.status: creating src/ngmx/Makefile config.status: creating src/contrib/Makefile config.status: creating scripts/Makefile config.status: creating admin/Makefile config.status: creating share/Makefile config.status: creating share/tutor/Makefile config.status: creating share/tutor/gmxdemo/Makefile config.status: creating share/tutor/nmr1/Makefile config.status: creating share/tutor/nmr2/Makefile config.status: creating share/tutor/water/Makefile config.status: creating share/tutor/mixed/Makefile config.status: creating share/tutor/methanol/Makefile config.status: creating share/tutor/speptide/Makefile config.status: creating share/template/Makefile config.status: creating share/top/Makefile config.status: creating share/html/Makefile config.status: creating share/html/images/Makefile config.status: creating share/html/online/Makefile config.status: creating man/Makefile config.status: creating man/man1/Makefile config.status: creating src/config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --without-included-gettext, --disable-rpath, --enable-prefetch-forces + sed -i 's|^hardcode_libdir_flag_spec=.*|hardcode_libdir_flag_spec=""|g' libtool + sed -i 's|^runpath_var=LD_RUN_PATH|runpath_var=DIE_RPATH_DIE|g' libtool + '[' -n 8 ']' + make -j8 make: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' Making all in include make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' Making all in . make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' Making all in types make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include/types' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include/types' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' Making all in src make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' make all-recursive make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' Making all in gmxlib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' Making all in nonbonded make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' Making all in nb_kernel_x86_64_sse2 make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel010_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel010_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel030_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel030_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel100_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel100_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel101_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel101_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel102_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel102_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel103_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel103_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel104_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel104_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel110_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel110_x86_64_sse2.s mkdir .libs mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel010_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel010_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel102_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel102_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel104_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel104_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel100_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel100_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel111_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel111_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel101_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel101_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel110_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel110_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel103_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel103_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel030_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel030_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel112_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel112_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel113_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel113_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel114_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel114_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel130_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel130_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel131_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel131_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel132_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel132_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel133_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel133_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel111_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel111_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel134_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel134_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel133_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel133_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel130_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel130_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel112_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel112_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel114_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel114_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel113_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel113_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel131_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel131_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel200_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel200_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel132_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel132_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel201_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel201_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel202_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel202_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel203_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel203_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel204_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel204_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel210_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel210_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel211_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel211_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel134_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel134_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel212_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel212_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel200_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel200_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel204_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel204_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel201_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel201_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel213_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel213_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel203_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel203_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel202_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel202_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel214_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel214_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel211_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel211_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel210_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel210_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel230_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel230_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel231_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel231_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel232_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel232_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel212_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel212_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel233_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel233_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel234_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel234_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel300_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel300_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel231_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel231_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel213_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel213_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel232_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel232_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel301_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel301_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel214_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel214_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel230_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel230_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel233_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel233_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel302_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel302_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel303_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel303_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel304_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel304_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel234_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel234_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel310_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel310_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel311_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel311_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel312_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel312_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel300_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel300_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel313_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel313_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel301_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel301_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel304_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel304_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel302_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel302_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel310_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel310_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel311_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel311_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel314_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel314_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel312_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel312_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel330_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel330_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel331_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel331_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel332_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel332_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel333_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel333_x86_64_sse2.s /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel334_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel334_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel303_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel303_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel400_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel400_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel334_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel334_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel313_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel313_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel314_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel314_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel410_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel410_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel330_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel330_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel332_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel332_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel331_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel331_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel430_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel430_x86_64_sse2.s mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel333_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel333_x86_64_sse2.o /bin/sh ../../../../libtool --mode=compile mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_x86_64_sse2_test.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel_x86_64_sse2_test.s /bin/sh ../../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2 -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_x86_64_sse2.lo ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel_x86_64_sse2.c mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel400_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel400_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel410_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel410_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel430_x86_64_sse2.s -fPIC -DPIC -o .libs/nb_kernel430_x86_64_sse2.o mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel_x86_64_sse2_test.s -fPIC -DPIC -o .libs/nb_kernel_x86_64_sse2_test.o mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2 -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel_x86_64_sse2.c -fPIC -DPIC -o .libs/nb_kernel_x86_64_sse2.o /bin/sh ../../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnb_kernel_x86_64_sse2.la nb_kernel010_x86_64_sse2.lo nb_kernel030_x86_64_sse2.lo nb_kernel100_x86_64_sse2.lo nb_kernel101_x86_64_sse2.lo nb_kernel102_x86_64_sse2.lo nb_kernel103_x86_64_sse2.lo nb_kernel104_x86_64_sse2.lo nb_kernel110_x86_64_sse2.lo nb_kernel111_x86_64_sse2.lo nb_kernel112_x86_64_sse2.lo nb_kernel113_x86_64_sse2.lo nb_kernel114_x86_64_sse2.lo nb_kernel130_x86_64_sse2.lo nb_kernel131_x86_64_sse2.lo nb_kernel132_x86_64_sse2.lo nb_kernel133_x86_64_sse2.lo nb_kernel134_x86_64_sse2.lo nb_kernel200_x86_64_sse2.lo nb_kernel201_x86_64_sse2.lo nb_kernel202_x86_64_sse2.lo nb_kernel203_x86_64_sse2.lo nb_kernel204_x86_64_sse2.lo nb_kernel210_x86_64_sse2.lo nb_kernel211_x86_64_sse2.lo nb_kernel212_x86_64_sse2.lo nb_kernel213_x86_64_sse2.lo nb_kernel214_x86_64_sse2.lo nb_kernel230_x86_64_sse2.lo nb_kernel231_x86_64_sse2.lo nb_kernel232_x86_64_sse2.lo nb_kernel233_x86_64_sse2.lo nb_kernel234_x86_64_sse2.lo nb_kernel300_x86_64_sse2.lo nb_kernel301_x86_64_sse2.lo nb_kernel302_x86_64_sse2.lo nb_kernel303_x86_64_sse2.lo nb_kernel304_x86_64_sse2.lo nb_kernel310_x86_64_sse2.lo nb_kernel311_x86_64_sse2.lo nb_kernel312_x86_64_sse2.lo nb_kernel313_x86_64_sse2.lo nb_kernel314_x86_64_sse2.lo nb_kernel330_x86_64_sse2.lo nb_kernel331_x86_64_sse2.lo nb_kernel332_x86_64_sse2.lo nb_kernel333_x86_64_sse2.lo nb_kernel334_x86_64_sse2.lo nb_kernel400_x86_64_sse2.lo nb_kernel410_x86_64_sse2.lo nb_kernel430_x86_64_sse2.lo nb_kernel_x86_64_sse2_test.lo nb_kernel_x86_64_sse2.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libnb_kernel_x86_64_sse2.a .libs/nb_kernel010_x86_64_sse2.o .libs/nb_kernel030_x86_64_sse2.o .libs/nb_kernel100_x86_64_sse2.o .libs/nb_kernel101_x86_64_sse2.o .libs/nb_kernel102_x86_64_sse2.o .libs/nb_kernel103_x86_64_sse2.o .libs/nb_kernel104_x86_64_sse2.o .libs/nb_kernel110_x86_64_sse2.o .libs/nb_kernel111_x86_64_sse2.o .libs/nb_kernel112_x86_64_sse2.o .libs/nb_kernel113_x86_64_sse2.o .libs/nb_kernel114_x86_64_sse2.o .libs/nb_kernel130_x86_64_sse2.o .libs/nb_kernel131_x86_64_sse2.o .libs/nb_kernel132_x86_64_sse2.o .libs/nb_kernel133_x86_64_sse2.o .libs/nb_kernel134_x86_64_sse2.o .libs/nb_kernel200_x86_64_sse2.o .libs/nb_kernel201_x86_64_sse2.o .libs/nb_kernel202_x86_64_sse2.o .libs/nb_kernel203_x86_64_sse2.o .libs/nb_kernel204_x86_64_sse2.o .libs/nb_kernel210_x86_64_sse2.o .libs/nb_kernel211_x86_64_sse2.o .libs/nb_kernel212_x86_64_sse2.o .libs/nb_kernel213_x86_64_sse2.o .libs/nb_kernel214_x86_64_sse2.o .libs/nb_kernel230_x86_64_sse2.o .libs/nb_kernel231_x86_64_sse2.o .libs/nb_kernel232_x86_64_sse2.o .libs/nb_kernel233_x86_64_sse2.o .libs/nb_kernel234_x86_64_sse2.o .libs/nb_kernel300_x86_64_sse2.o .libs/nb_kernel301_x86_64_sse2.o .libs/nb_kernel302_x86_64_sse2.o .libs/nb_kernel303_x86_64_sse2.o .libs/nb_kernel304_x86_64_sse2.o .libs/nb_kernel310_x86_64_sse2.o .libs/nb_kernel311_x86_64_sse2.o .libs/nb_kernel312_x86_64_sse2.o .libs/nb_kernel313_x86_64_sse2.o .libs/nb_kernel314_x86_64_sse2.o .libs/nb_kernel330_x86_64_sse2.o .libs/nb_kernel331_x86_64_sse2.o .libs/nb_kernel332_x86_64_sse2.o .libs/nb_kernel333_x86_64_sse2.o .libs/nb_kernel334_x86_64_sse2.o .libs/nb_kernel400_x86_64_sse2.o .libs/nb_kernel410_x86_64_sse2.o .libs/nb_kernel430_x86_64_sse2.o .libs/nb_kernel_x86_64_sse2_test.o .libs/nb_kernel_x86_64_sse2.o ranlib .libs/libnb_kernel_x86_64_sse2.a creating libnb_kernel_x86_64_sse2.la (cd .libs && rm -f libnb_kernel_x86_64_sse2.la && ln -s ../libnb_kernel_x86_64_sse2.la libnb_kernel_x86_64_sse2.la) make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' Making all in nb_kernel make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_metacode.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_metacode.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_common.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_common.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_declarations.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_declarations.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_outerloop.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_outerloop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_innerloop.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_innerloop.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -c -o mknb_interactions.o ../../../../../src/gmxlib/nonbonded/nb_kernel/mknb_interactions.c x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -o mknb mknb.o mknb_metacode.o mknb_common.o mknb_declarations.o mknb_outerloop.o mknb_innerloop.o mknb_interactions.o rm -f kernel-stamp ./mknb -double -software_invsqrt -fortran >>> Gromacs nonbonded kernel generator (-h for help) >>> Generating double precision functions in Fortran77. >>> Using Gromacs software version of 1/sqrt(x). Progress: 1% Progress: 2% Progress: 4% Progress: 5% Progress: 7% Progress: 8% Progress: 10% Progress: 11% Progress: 13% Progress: 14% Progress: 16% Progress: 17% Progress: 19% Progress: 20% Progress: 22% Progress: 23% Progress: 25% Progress: 26% Progress: 28% Progress: 29% Progress: 31% Progress: 32% Progress: 34% Progress: 35% Progress: 37% Progress: 38% Progress: 40% Progress: 41% Progress: 43% Progress: 44% Progress: 46% Progress: 47% Progress: 49% Progress: 50% Progress: 52% Progress: 53% Progress: 55% Progress: 56% Progress: 58% Progress: 59% Progress: 61% Progress: 62% Progress: 64% Progress: 65% Progress: 67% Progress: 68% Progress: 70% Progress: 71% Progress: 73% Progress: 74% Progress: 76% Progress: 77% Progress: 79% Progress: 80% Progress: 82% Progress: 83% Progress: 85% Progress: 86% Progress: 88% Progress: 89% Progress: 91% Progress: 92% Progress: 94% Progress: 95% Progress: 97% Progress: 98% Progress: 100% make all-am make[6]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' /bin/sh ../../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel.lo ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel.c /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel010_f.lo nb_kernel010_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel020_f.lo nb_kernel020_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel030_f.lo nb_kernel030_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel100_f.lo nb_kernel100_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel101_f.lo nb_kernel101_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel102_f.lo nb_kernel102_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel103_f.lo nb_kernel103_f.f mkdir .libs f77 -pipe -Wall -g -O2 -c nb_kernel100_f.f -fPIC -o .libs/nb_kernel100_f.o f77 -pipe -Wall -g -O2 -c nb_kernel010_f.f -fPIC -o .libs/nb_kernel010_f.o f77 -pipe -Wall -g -O2 -c nb_kernel020_f.f -fPIC -o .libs/nb_kernel020_f.o f77 -pipe -Wall -g -O2 -c nb_kernel030_f.f -fPIC -o .libs/nb_kernel030_f.o f77 -pipe -Wall -g -O2 -c nb_kernel101_f.f -fPIC -o .libs/nb_kernel101_f.o nb_kernel010_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:132:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel010_f.f:169:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:146:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel010_f.f:185:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:172:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:181:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:170:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:168:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:310:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel010_f.f:165:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:183:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:182:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:324:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel010_f.f:180:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:171:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:186:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:184:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:178:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:173:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:179:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel010_f.f:189:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:220:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:236:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:223:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:232:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:221:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:219:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:216:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:234:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:233:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:231:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:222:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:237:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:235:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:224:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel030_f.f:240:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel102_f.f -fPIC -o .libs/nb_kernel102_f.o nb_kernel020_f.f:129:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel100_f.f:125:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel100_f.f:272:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel100_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:204:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:191:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:200:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:187:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:184:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:202:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:201:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:199:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:190:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:205:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:203:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:194:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:197:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:193:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:195:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:198:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:196:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel100_f.f:208:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:287:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel020_f.f:36:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:37:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:40:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:198:38: & charge, 1 Warning: Unused dummy argument 'charge' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:214:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:201:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:210:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:199:37: & facel, 1 Warning: Unused dummy argument 'facel' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:197:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:194:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:212:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:211:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:209:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:200:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:215:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:213:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:207:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:202:34: & Vc, 1 Warning: Unused dummy argument 'vc' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:208:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel020_f.f:218:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel103_f.f -fPIC -o .libs/nb_kernel103_f.o nb_kernel101_f.f:153:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:193:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:202:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:211:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:220:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:229:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:238:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:247:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:162:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:256:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:265:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:171:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:374:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:592:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:601:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:610:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:383:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:619:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:628:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:637:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel101_f.f:392:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:646:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:655:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:664:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel102_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:284:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:271:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:280:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:267:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:264:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:282:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:281:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:279:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:270:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:285:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:283:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:274:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:277:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:273:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:275:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:278:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:276:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel101_f.f:288:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel.c -fPIC -DPIC -o .libs/nb_kernel.o nb_kernel102_f.f:462:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:449:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:458:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:445:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:442:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:460:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:459:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:457:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:448:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:463:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:461:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:452:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:455:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:451:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:453:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:456:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:454:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel102_f.f:466:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:153:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:162:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:171:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:374:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:383:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:392:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel103_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:284:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:271:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:280:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:267:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:264:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:282:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:281:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:279:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:270:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:285:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:283:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:274:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:277:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:273:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:275:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:278:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:276:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel103_f.f:288:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel104_f.lo nb_kernel104_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel110_f.lo nb_kernel110_f.f f77 -pipe -Wall -g -O2 -c nb_kernel104_f.f -fPIC -o .libs/nb_kernel104_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel111_f.lo nb_kernel111_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel112_f.lo nb_kernel112_f.f nb_kernel104_f.f:193:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:202:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:211:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:220:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:229:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:238:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:247:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:256:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:265:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:592:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:601:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:610:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:619:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:628:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:637:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:646:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:655:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:664:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel104_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:462:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:449:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:458:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:445:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:442:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:460:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:459:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:457:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:448:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:463:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:461:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:452:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:455:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:451:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:453:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:456:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:454:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel104_f.f:466:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel113_f.lo nb_kernel113_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel114_f.lo nb_kernel114_f.f f77 -pipe -Wall -g -O2 -c nb_kernel110_f.f -fPIC -o .libs/nb_kernel110_f.o nb_kernel110_f.f:133:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel110_f.f:297:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel110_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:220:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:207:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:216:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:203:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:200:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:218:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:217:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:215:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:206:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:221:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:219:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:213:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:214:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel110_f.f:224:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel120_f.lo nb_kernel120_f.f f77 -pipe -Wall -g -O2 -c nb_kernel112_f.f -fPIC -o .libs/nb_kernel112_f.o f77 -pipe -Wall -g -O2 -c nb_kernel111_f.f -fPIC -o .libs/nb_kernel111_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel121_f.lo nb_kernel121_f.f nb_kernel112_f.f:202:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:211:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:220:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:229:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:238:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:247:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:256:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:265:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:274:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:616:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:625:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:634:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:643:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:652:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:661:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:670:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:679:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:688:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel112_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:476:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:463:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:472:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:459:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:456:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:474:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:473:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:471:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:462:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:477:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:475:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:469:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:470:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel112_f.f:480:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel113_f.f -fPIC -o .libs/nb_kernel113_f.o nb_kernel113_f.f:174:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:183:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:192:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:435:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:444:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:453:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel113_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:326:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:313:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:322:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:309:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:306:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:324:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:323:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:321:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:312:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:327:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:325:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:319:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:320:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel113_f.f:330:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:161:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:170:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:179:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:399:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:408:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:417:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel111_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:300:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:287:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:296:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:283:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:280:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:298:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:297:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:295:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:286:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:301:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:299:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:293:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:294:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel111_f.f:304:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel114_f.f -fPIC -o .libs/nb_kernel114_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel122_f.lo nb_kernel122_f.f f77 -pipe -Wall -g -O2 -c nb_kernel120_f.f -fPIC -o .libs/nb_kernel120_f.o f77 -pipe -Wall -g -O2 -c nb_kernel121_f.f -fPIC -o .libs/nb_kernel121_f.o nb_kernel120_f.f:133:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:299:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:219:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:222:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:228:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:237:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:246:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:255:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:264:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:209:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:218:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:205:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:273:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:202:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:220:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:219:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:282:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:217:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:208:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:223:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:221:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:291:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:215:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel120_f.f:216:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:660:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel120_f.f:226:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:669:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:678:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:687:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:696:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:705:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:714:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:723:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:732:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel114_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:506:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:493:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:502:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:489:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:486:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:504:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:503:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:501:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:492:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:507:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:505:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:499:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:500:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel114_f.f:510:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel122_f.f -fPIC -o .libs/nb_kernel122_f.o nb_kernel121_f.f:161:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:170:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:179:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:401:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:203:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:212:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:221:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:230:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:239:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:248:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:257:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:266:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:275:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:619:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:410:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:419:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel121_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:302:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:289:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:298:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:285:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:282:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:300:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:299:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:297:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:288:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:303:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:628:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:637:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:646:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:655:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:664:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:673:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:682:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:691:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel122_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:301:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:295:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:296:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel121_f.f:306:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:478:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:465:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:474:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:461:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:458:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:476:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:475:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:473:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:464:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:479:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:477:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:471:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:472:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel122_f.f:482:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel123_f.lo nb_kernel123_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel124_f.lo nb_kernel124_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel130_f.lo nb_kernel130_f.f f77 -pipe -Wall -g -O2 -c nb_kernel124_f.f -fPIC -o .libs/nb_kernel124_f.o f77 -pipe -Wall -g -O2 -c nb_kernel130_f.f -fPIC -o .libs/nb_kernel130_f.o f77 -pipe -Wall -g -O2 -c nb_kernel123_f.f -fPIC -o .libs/nb_kernel123_f.o nb_kernel124_f.f:219:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:228:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:237:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:246:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:255:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:264:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:273:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:282:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:291:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:300:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:671:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:680:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:689:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:698:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:707:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:716:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:725:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:734:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:743:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:752:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel124_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:517:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:504:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:513:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:500:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:497:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:515:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:514:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:512:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:503:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:518:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:516:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:510:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:511:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel124_f.f:521:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:137:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel130_f.f:155:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel130_f.f:325:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel130_f.f:342:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel130_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:247:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:234:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:243:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:230:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:227:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:245:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:244:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:242:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:233:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:248:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:246:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel130_f.f:251:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:173:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:182:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:191:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:200:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:445:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:454:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:463:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:472:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel123_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:337:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:324:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:333:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:320:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:317:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:335:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:334:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:332:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:323:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:338:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:336:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:330:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:331:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel123_f.f:341:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel131_f.lo nb_kernel131_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel132_f.lo nb_kernel132_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel133_f.lo nb_kernel133_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel134_f.lo nb_kernel134_f.f f77 -pipe -Wall -g -O2 -c nb_kernel131_f.f -fPIC -o .libs/nb_kernel131_f.o nb_kernel131_f.f:165:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:174:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:183:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:202:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel131_f.f:427:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:436:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:445:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel131_f.f:463:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel131_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:327:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:314:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:323:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:310:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:307:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:325:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:324:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:322:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:313:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:328:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:326:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel131_f.f:331:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel200_f.lo nb_kernel200_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel201_f.lo nb_kernel201_f.f f77 -pipe -Wall -g -O2 -c nb_kernel132_f.f -fPIC -o .libs/nb_kernel132_f.o nb_kernel132_f.f:206:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:215:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:224:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:233:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:242:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:251:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:260:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:269:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:278:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:293:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel132_f.f:644:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:653:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:662:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:671:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:680:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:689:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:698:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:707:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:716:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel132_f.f:730:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel132_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel133_f.f -fPIC -o .libs/nb_kernel133_f.o nb_kernel132_f.f:503:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:490:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:499:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:486:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:483:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:501:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:500:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:498:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:489:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:504:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:502:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel132_f.f:507:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel134_f.f -fPIC -o .libs/nb_kernel134_f.o f77 -pipe -Wall -g -O2 -c nb_kernel200_f.f -fPIC -o .libs/nb_kernel200_f.o nb_kernel133_f.f:177:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:186:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:195:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:204:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:218:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel133_f.f:469:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:478:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:487:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:496:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel133_f.f:510:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel133_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:360:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:347:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:356:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:343:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:340:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:358:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:357:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:355:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:346:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:361:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:359:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel133_f.f:364:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:126:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel200_f.f:275:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel200_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:206:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:202:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:189:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:186:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:204:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:203:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:201:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:207:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:205:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:196:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:199:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:195:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:197:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:200:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:198:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel200_f.f:210:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel201_f.f -fPIC -o .libs/nb_kernel201_f.o nb_kernel134_f.f:222:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:231:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:240:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:249:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:258:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:267:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:276:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:285:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:294:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:303:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:314:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel134_f.f:694:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:703:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:712:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:721:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:730:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:739:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:748:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:757:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:766:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:775:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel134_f.f:786:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel134_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:540:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:527:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:536:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:523:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:520:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:538:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:537:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:535:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel202_f.lo nb_kernel202_f.f nb_kernel134_f.f:526:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:541:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:539:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel134_f.f:544:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:154:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:163:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:172:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:379:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:388:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:397:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel201_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:288:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:284:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:271:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:268:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:286:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:285:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:283:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:289:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:287:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:278:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:281:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:277:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:279:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:282:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:280:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel201_f.f:292:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel203_f.lo nb_kernel203_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel204_f.lo nb_kernel204_f.f f77 -pipe -Wall -g -O2 -c nb_kernel202_f.f -fPIC -o .libs/nb_kernel202_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel210_f.lo nb_kernel210_f.f f77 -pipe -Wall -g -O2 -c nb_kernel203_f.f -fPIC -o .libs/nb_kernel203_f.o nb_kernel203_f.f:154:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:163:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:172:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:379:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:388:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:397:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:194:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:203:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:212:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:221:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:230:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:239:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:248:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:257:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:266:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel203_f.f:288:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:284:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:271:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:268:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:286:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:285:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:283:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:289:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:287:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:278:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:281:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:277:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:279:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:282:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:280:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel203_f.f:292:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:603:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:612:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:621:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:630:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:639:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:648:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:657:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:666:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:675:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel202_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:472:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:468:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:455:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:452:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:470:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:469:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:467:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:473:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:471:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:462:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:465:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:461:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:463:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:466:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:464:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel202_f.f:476:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel204_f.f -fPIC -o .libs/nb_kernel204_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel211_f.lo nb_kernel211_f.f nb_kernel204_f.f:194:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:203:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:212:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:221:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:230:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:239:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:248:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:257:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:266:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:603:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:612:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:621:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:630:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:639:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:648:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:657:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:666:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:675:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel204_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:472:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel210_f.f -fPIC -o .libs/nb_kernel210_f.o nb_kernel204_f.f:468:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:455:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:452:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:470:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:469:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:467:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:473:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:471:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:462:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:465:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:461:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:463:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:466:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:464:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel204_f.f:476:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:134:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel210_f.f:301:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel210_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:223:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:219:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:206:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:203:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:221:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:220:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:218:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:224:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:222:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:216:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:217:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel210_f.f:227:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel212_f.lo nb_kernel212_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel213_f.lo nb_kernel213_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel214_f.lo nb_kernel214_f.f f77 -pipe -Wall -g -O2 -c nb_kernel212_f.f -fPIC -o .libs/nb_kernel212_f.o f77 -pipe -Wall -g -O2 -c nb_kernel211_f.f -fPIC -o .libs/nb_kernel211_f.o nb_kernel212_f.f:203:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:212:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:221:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:230:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:239:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:248:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:257:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:266:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:275:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:628:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:637:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:646:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:655:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:664:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:673:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:682:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:691:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:700:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel212_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:487:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:483:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:470:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:467:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:485:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:484:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:482:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:488:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:486:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:480:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:481:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel212_f.f:491:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:162:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:171:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:180:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:405:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:414:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:423:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel211_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:305:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:301:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:288:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:285:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:303:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:302:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:300:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:306:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:304:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:298:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:299:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel211_f.f:309:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel220_f.lo nb_kernel220_f.f f77 -pipe -Wall -g -O2 -c nb_kernel213_f.f -fPIC -o .libs/nb_kernel213_f.o nb_kernel213_f.f:175:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:184:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:193:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:440:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:449:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:458:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel213_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:330:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:326:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:313:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:310:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:328:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:327:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:325:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:331:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:329:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:323:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:324:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel213_f.f:334:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel214_f.f -fPIC -o .libs/nb_kernel214_f.o nb_kernel214_f.f:220:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:229:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:238:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:247:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:256:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:265:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:274:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:283:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:292:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:671:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:680:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:689:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:698:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:707:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:716:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:725:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:734:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:743:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel214_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:516:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:512:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:499:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:496:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:514:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:513:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:511:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:517:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:515:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:509:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:510:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel214_f.f:520:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel220_f.f -fPIC -o .libs/nb_kernel220_f.o nb_kernel220_f.f:134:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel220_f.f:303:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel220_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:225:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:221:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:208:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:205:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:223:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:222:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:220:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:226:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:224:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:218:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:219:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel220_f.f:229:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel221_f.lo nb_kernel221_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel222_f.lo nb_kernel222_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel223_f.lo nb_kernel223_f.f f77 -pipe -Wall -g -O2 -c nb_kernel221_f.f -fPIC -o .libs/nb_kernel221_f.o f77 -pipe -Wall -g -O2 -c nb_kernel222_f.f -fPIC -o .libs/nb_kernel222_f.o nb_kernel221_f.f:162:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel224_f.lo nb_kernel224_f.f nb_kernel221_f.f:171:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:180:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:407:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:416:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:425:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel221_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:307:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:303:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:290:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:287:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:305:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:304:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:302:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:308:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:306:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:300:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:301:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel221_f.f:311:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel230_f.lo nb_kernel230_f.f nb_kernel222_f.f:204:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:213:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:222:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:231:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:240:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:249:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:258:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:267:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:276:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:631:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:640:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:649:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:658:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:667:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:676:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:685:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:694:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:703:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel222_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:489:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:485:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:472:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:469:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:487:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:486:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:484:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:490:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:488:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:482:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:483:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel222_f.f:493:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel223_f.f -fPIC -o .libs/nb_kernel223_f.o nb_kernel223_f.f:174:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:183:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:192:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:201:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:450:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:459:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:468:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:477:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel223_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:341:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:337:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:324:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:321:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:339:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:338:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:336:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:342:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:340:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:334:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:335:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel223_f.f:345:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel231_f.lo nb_kernel231_f.f f77 -pipe -Wall -g -O2 -c nb_kernel230_f.f -fPIC -o .libs/nb_kernel230_f.o nb_kernel230_f.f:138:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel230_f.f:157:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel230_f.f:328:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel230_f.f:346:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel230_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:249:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:245:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:232:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:229:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:247:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:246:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:244:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:250:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel224_f.f -fPIC -o .libs/nb_kernel224_f.o nb_kernel230_f.f:248:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel230_f.f:253:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:220:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:229:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:238:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:247:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:256:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:265:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:274:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:283:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:292:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:301:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:682:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:691:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:700:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:709:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:718:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:727:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:736:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:745:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:754:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:763:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel224_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:527:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:523:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:510:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:507:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:525:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:524:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:522:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:528:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:526:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:520:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:521:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel224_f.f:531:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel232_f.lo nb_kernel232_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel233_f.lo nb_kernel233_f.f f77 -pipe -Wall -g -O2 -c nb_kernel231_f.f -fPIC -o .libs/nb_kernel231_f.o nb_kernel231_f.f:166:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:175:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:184:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:204:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel231_f.f:432:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:441:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:450:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel231_f.f:469:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel231_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:331:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:327:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:314:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:311:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:329:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:328:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:326:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:332:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:330:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel231_f.f:335:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel234_f.lo nb_kernel234_f.f f77 -pipe -Wall -g -O2 -c nb_kernel233_f.f -fPIC -o .libs/nb_kernel233_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel300_f.lo nb_kernel300_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel301_f.lo nb_kernel301_f.f nb_kernel233_f.f:178:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:187:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:196:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:205:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:219:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel233_f.f:474:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:483:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:492:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:501:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel233_f.f:515:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel233_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel232_f.f -fPIC -o .libs/nb_kernel232_f.o nb_kernel233_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:364:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:360:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:347:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:344:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:362:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:361:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:359:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:365:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:363:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel233_f.f:368:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:207:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:216:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:225:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:234:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:243:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:252:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:261:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:270:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:279:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:295:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel232_f.f:655:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:664:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:673:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:682:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:691:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:700:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:709:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:718:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:727:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel232_f.f:742:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel232_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:513:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:509:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:496:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:493:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:511:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:510:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:508:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:514:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:512:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel232_f.f:517:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel234_f.f -fPIC -o .libs/nb_kernel234_f.o f77 -pipe -Wall -g -O2 -c nb_kernel300_f.f -fPIC -o .libs/nb_kernel300_f.o f77 -pipe -Wall -g -O2 -c nb_kernel301_f.f -fPIC -o .libs/nb_kernel301_f.o nb_kernel234_f.f:223:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:232:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:241:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:250:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:259:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:268:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:277:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:286:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:295:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:304:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:315:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel234_f.f:705:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:714:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:723:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:732:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:741:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:750:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:759:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:768:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:777:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:786:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel234_f.f:797:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel234_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:550:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:546:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:533:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:530:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:548:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:547:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:545:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:551:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:549:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel234_f.f:554:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:157:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:166:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:175:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:188:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:215:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:241:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:420:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:429:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:438:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel301_f.f:451:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:466:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:480:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel301_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:327:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:314:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:323:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:310:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:307:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:325:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:324:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:322:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:313:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:328:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:326:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:317:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:316:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:318:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:319:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel301_f.f:331:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:129:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel300_f.f:141:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel300_f.f:292:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel300_f.f:304:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel300_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:221:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel302_f.lo nb_kernel302_f.f nb_kernel300_f.f:208:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:217:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:204:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:201:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:219:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:218:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:216:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:207:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:222:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:220:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:211:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:210:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:212:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:213:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel300_f.f:225:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel303_f.lo nb_kernel303_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel304_f.lo nb_kernel304_f.f f77 -pipe -Wall -g -O2 -c nb_kernel302_f.f -fPIC -o .libs/nb_kernel302_f.o nb_kernel302_f.f:197:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:206:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:215:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:224:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:233:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:242:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:251:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:260:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:269:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:281:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:308:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:335:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:362:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:389:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:416:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:443:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:470:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:497:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:716:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:725:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:734:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:743:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:752:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:761:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:770:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:779:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:788:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel302_f.f:800:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:815:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:830:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:845:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:860:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:875:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:890:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:905:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:920:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel302_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:583:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:570:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:579:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:566:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:563:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:581:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:580:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:578:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:569:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:584:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:582:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:573:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:572:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:574:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:575:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel302_f.f:587:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel303_f.f -fPIC -o .libs/nb_kernel303_f.o f77 -pipe -Wall -g -O2 -c nb_kernel304_f.f -fPIC -o .libs/nb_kernel304_f.o nb_kernel303_f.f:157:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel303_f.f:166:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel303_f.f:175:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel303_f.f:188:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:214:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:241:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:420:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel303_f.f:429:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel303_f.f:438:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel303_f.f:451:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:465:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:480:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel303_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:327:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:314:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:323:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:310:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:307:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:325:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:324:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:322:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:313:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:328:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:326:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:317:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:316:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:318:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:319:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel303_f.f:331:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel310_f.lo nb_kernel310_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel311_f.lo nb_kernel311_f.f nb_kernel304_f.f:197:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:206:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:215:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:224:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:233:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:242:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:251:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:260:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:269:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:281:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:308:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:335:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:362:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:389:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:416:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:443:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:470:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:497:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:716:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:725:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:734:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:743:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:752:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:761:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:770:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:779:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:788:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel304_f.f:800:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:815:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:830:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:845:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:860:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:875:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:890:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:905:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:920:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel304_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel310_f.f -fPIC -o .libs/nb_kernel310_f.o nb_kernel304_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:138:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel310_f.f:154:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel310_f.f:320:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel310_f.f:336:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel310_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:240:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:227:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:236:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:223:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:220:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:238:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:237:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:235:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:226:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:241:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:239:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel310_f.f:244:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:583:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:570:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:579:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:566:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:563:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:581:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:580:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:578:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:569:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:584:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:582:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:573:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:572:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:574:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:575:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel304_f.f:587:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel312_f.lo nb_kernel312_f.f f77 -pipe -Wall -g -O2 -c nb_kernel311_f.f -fPIC -o .libs/nb_kernel311_f.o nb_kernel311_f.f:166:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:175:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:184:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:201:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:233:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:259:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:448:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:457:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:466:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel311_f.f:483:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:502:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:516:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel311_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:346:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:333:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:342:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:329:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:326:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:344:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:343:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:341:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:332:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:347:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:345:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel311_f.f:350:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel313_f.lo nb_kernel313_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel314_f.lo nb_kernel314_f.f f77 -pipe -Wall -g -O2 -c nb_kernel312_f.f -fPIC -o .libs/nb_kernel312_f.o nb_kernel312_f.f:207:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:216:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:225:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:234:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:243:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:252:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:261:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:270:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:279:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:292:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:324:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:351:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:378:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:405:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:432:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:459:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:486:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:513:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:743:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:752:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:761:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:770:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:779:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:788:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:797:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:806:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:815:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel312_f.f:828:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:847:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:862:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:877:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:892:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:907:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:922:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:937:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:952:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel312_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:600:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:587:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:596:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:583:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:580:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:598:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:597:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:595:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:586:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:601:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:599:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel312_f.f:604:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel320_f.lo nb_kernel320_f.f f77 -pipe -Wall -g -O2 -c nb_kernel313_f.f -fPIC -o .libs/nb_kernel313_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel321_f.lo nb_kernel321_f.f f77 -pipe -Wall -g -O2 -c nb_kernel314_f.f -fPIC -o .libs/nb_kernel314_f.o nb_kernel313_f.f:179:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:188:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:197:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:227:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:253:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:280:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:482:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:491:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:500:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel313_f.f:520:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:534:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:549:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel313_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:370:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:357:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:366:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:353:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:350:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:368:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:367:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:365:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:356:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:371:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:369:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel313_f.f:374:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:224:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:233:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:242:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:251:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:260:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:269:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:278:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:287:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:296:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:322:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:349:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:376:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:403:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:430:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:457:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:484:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:511:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:538:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:785:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:794:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:803:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:812:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:821:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:830:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:839:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:848:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:857:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel314_f.f:873:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:888:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:903:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:918:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:933:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:948:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:963:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:978:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:993:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel314_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:628:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:615:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:624:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:611:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:608:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:626:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:625:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:623:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:614:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:629:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:627:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel314_f.f:632:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel320_f.f -fPIC -o .libs/nb_kernel320_f.o nb_kernel320_f.f:138:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel320_f.f:155:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel320_f.f:322:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel320_f.f:339:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel320_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:242:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:229:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:238:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:225:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:222:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:240:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:239:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:237:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:228:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:243:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:241:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel320_f.f:246:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel321_f.f -fPIC -o .libs/nb_kernel321_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel322_f.lo nb_kernel322_f.f nb_kernel321_f.f:166:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:175:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:184:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:202:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:235:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:261:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:450:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:459:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:468:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel321_f.f:486:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:506:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:520:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel321_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:348:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:335:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:344:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:331:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:328:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:346:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:345:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:343:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:334:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:349:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:347:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel321_f.f:352:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel323_f.lo nb_kernel323_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel324_f.lo nb_kernel324_f.f f77 -pipe -Wall -g -O2 -c nb_kernel322_f.f -fPIC -o .libs/nb_kernel322_f.o nb_kernel322_f.f:208:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:217:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:226:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:235:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:244:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:253:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:262:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:271:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:280:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:293:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:326:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:353:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:380:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:407:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:434:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:461:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:488:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:515:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:746:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:755:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:764:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:773:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:782:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:791:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:800:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:809:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:818:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel322_f.f:831:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:851:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:866:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:881:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:896:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:911:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:926:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:941:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:956:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel322_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:602:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:589:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:598:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:585:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:582:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:600:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:599:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:597:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:588:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:603:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:601:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel322_f.f:606:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel323_f.f -fPIC -o .libs/nb_kernel323_f.o f77 -pipe -Wall -g -O2 -c nb_kernel324_f.f -fPIC -o .libs/nb_kernel324_f.o nb_kernel323_f.f:178:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:187:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:196:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:205:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:238:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:264:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:291:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:492:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:501:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:510:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:519:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel323_f.f:542:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:556:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:571:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel323_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:381:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:368:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:377:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:364:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:361:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:379:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:378:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:376:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:367:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:382:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:380:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel323_f.f:385:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:224:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:233:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:242:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:251:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:260:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:269:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:278:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:287:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:296:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:305:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:333:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:360:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:387:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:414:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:441:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:468:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:495:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:522:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:549:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:796:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:805:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:814:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:823:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:832:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:841:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:850:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:859:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:868:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:877:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel324_f.f:895:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:910:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:925:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:940:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:955:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:970:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:985:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:1000:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:1015:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel324_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:639:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:626:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:635:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:622:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:619:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:637:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:636:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:634:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:625:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:640:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:638:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel324_f.f:643:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel330_f.lo nb_kernel330_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel331_f.lo nb_kernel331_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel332_f.lo nb_kernel332_f.f f77 -pipe -Wall -g -O2 -c nb_kernel330_f.f -fPIC -o .libs/nb_kernel330_f.o f77 -pipe -Wall -g -O2 -c nb_kernel331_f.f -fPIC -o .libs/nb_kernel331_f.o nb_kernel331_f.f:165:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:174:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:183:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:199:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:247:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:273:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:460:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:469:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:478:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel331_f.f:494:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:526:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:540:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel331_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:360:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:347:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:356:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:343:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:340:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:358:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:357:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:355:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:346:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:361:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:359:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel331_f.f:364:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:137:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel330_f.f:152:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel330_f.f:332:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel330_f.f:347:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel330_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:254:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:241:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:250:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:237:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:234:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:252:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:251:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:249:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:240:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:255:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:253:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel330_f.f:258:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel333_f.lo nb_kernel333_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel334_f.lo nb_kernel334_f.f f77 -pipe -Wall -g -O2 -c nb_kernel332_f.f -fPIC -o .libs/nb_kernel332_f.o f77 -pipe -Wall -g -O2 -c nb_kernel333_f.f -fPIC -o .libs/nb_kernel333_f.o /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel400_f.lo nb_kernel400_f.f nb_kernel333_f.f:177:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:186:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:195:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:204:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:218:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:257:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:283:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:310:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:509:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] f77 -pipe -Wall -g -O2 -c nb_kernel334_f.f -fPIC -o .libs/nb_kernel334_f.o nb_kernel333_f.f:518:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:527:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:536:29: fval = rsq41 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel333_f.f:550:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:575:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:589:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:604:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel333_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:400:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:387:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:396:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:383:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:380:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:398:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:397:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:395:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:386:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:401:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:399:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel333_f.f:404:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:206:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:215:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:224:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:233:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:242:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:251:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:260:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:269:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:278:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:290:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:338:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:365:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:392:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:419:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:446:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:473:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:500:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:527:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:755:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:222:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:231:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:240:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:249:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:258:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:267:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:276:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:285:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:294:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:303:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:314:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:352:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:379:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:406:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:433:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:460:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:487:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:514:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:541:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:568:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:812:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:821:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:830:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:839:29: fval = rsq24 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:848:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:857:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:866:29: fval = rsq34 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:875:29: fval = rsq42 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:884:29: fval = rsq43 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:893:29: fval = rsq44 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel334_f.f:904:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:928:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:943:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:958:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:973:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:988:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1003:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1018:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1033:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:1048:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel334_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:658:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:645:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:654:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:641:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:638:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:656:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:655:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:653:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:644:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:659:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:657:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel334_f.f:662:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:764:29: fval = rsq12 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:773:29: fval = rsq13 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:782:29: fval = rsq21 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:791:29: fval = rsq22 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:800:29: fval = rsq23 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:809:29: fval = rsq31 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:818:29: fval = rsq32 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:827:29: fval = rsq33 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel332_f.f:839:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:871:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:886:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:901:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:916:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:931:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:946:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:961:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:976:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel332_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:48:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:50:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:49:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:47:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:614:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:601:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:610:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:597:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:594:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:612:37: & GBtab, 1 Warning: Unused dummy argument 'gbtab' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:611:42: & gbtabscale, 1 Warning: Unused dummy argument 'gbtabscale' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:609:40: & invsqrta, 1 Warning: Unused dummy argument 'invsqrta' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:600:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:615:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:613:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel332_f.f:618:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel410_f.lo nb_kernel410_f.f /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel420_f.lo nb_kernel420_f.f f77 -pipe -Wall -g -O2 -c nb_kernel400_f.f -fPIC -o .libs/nb_kernel400_f.o nb_kernel400_f.f:133:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel400_f.f:149:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel400_f.f:306:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel400_f.f:321:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel400_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:42:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:41:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:43:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:44:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:233:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:220:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:229:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:216:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:213:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:219:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:234:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:232:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:223:37: & ntype, 1 Warning: Unused dummy argument 'ntype' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:226:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:222:36: & type, 1 Warning: Unused dummy argument 'type' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:224:40: & vdwparam, 1 Warning: Unused dummy argument 'vdwparam' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:227:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:225:36: & Vvdw, 1 Warning: Unused dummy argument 'vvdw' at (1) [-Wunused-dummy-argument] nb_kernel400_f.f:237:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] f77 -pipe -Wall -g -O2 -c nb_kernel420_f.f -fPIC -o .libs/nb_kernel420_f.o f77 -pipe -Wall -g -O2 -c nb_kernel410_f.f -fPIC -o .libs/nb_kernel410_f.o nb_kernel410_f.f:142:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel410_f.f:162:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel410_f.f:334:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel410_f.f:353:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel410_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:252:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:239:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:248:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:235:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:232:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:238:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:253:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:251:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:245:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:246:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel410_f.f:256:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:142:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel420_f.f:163:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel420_f.f:336:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel420_f.f:356:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel420_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:45:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:46:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:254:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:241:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:250:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:237:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:234:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:240:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:255:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:253:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:247:40: & tabscale, 1 Warning: Unused dummy argument 'tabscale' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:248:37: & VFtab, 1 Warning: Unused dummy argument 'vftab' at (1) [-Wunused-dummy-argument] nb_kernel420_f.f:258:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=F77 --mode=compile f77 -pipe -Wall -g -O2 -c -o nb_kernel430_f.lo nb_kernel430_f.f /bin/sh ../../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_kernel_f77sync.lo ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel_f77sync.c f77 -pipe -Wall -g -O2 -c nb_kernel430_f.f -fPIC -o .libs/nb_kernel430_f.o mpicc -DHAVE_CONFIG_H -I. -I../../../../../src/gmxlib/nonbonded/nb_kernel -I../../../../src -I../../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../../src/gmxlib/nonbonded/nb_kernel/nb_kernel_f77sync.c -fPIC -DPIC -o .libs/nb_kernel_f77sync.o nb_kernel430_f.f:141:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel430_f.f:160:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:179:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:351:29: fval = rsq11 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] nb_kernel430_f.f:369:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:383:29: n0 = rt 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] nb_kernel430_f.f:52:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:39:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:38:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:53:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:51:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:56:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:271:37: & count, 1 Warning: Unused dummy argument 'count' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:258:35: & crf, 1 Warning: Unused dummy argument 'crf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:267:36: & dvda, 1 Warning: Unused dummy argument 'dvda' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:254:39: & faction, 1 Warning: Unused dummy argument 'faction' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:251:38: & fshift, 1 Warning: Unused dummy argument 'fshift' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:257:35: & krf, 1 Warning: Unused dummy argument 'krf' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:272:35: & mtx, 1 Warning: Unused dummy argument 'mtx' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:270:40: & nthreads, 1 Warning: Unused dummy argument 'nthreads' at (1) [-Wunused-dummy-argument] nb_kernel430_f.f:275:36: & work) 1 Warning: Unused dummy argument 'work' at (1) [-Wunused-dummy-argument] /bin/sh ../../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnb_kernel.la nb_kernel.lo nb_kernel010_f.lo nb_kernel020_f.lo nb_kernel030_f.lo nb_kernel100_f.lo nb_kernel101_f.lo nb_kernel102_f.lo nb_kernel103_f.lo nb_kernel104_f.lo nb_kernel110_f.lo nb_kernel111_f.lo nb_kernel112_f.lo nb_kernel113_f.lo nb_kernel114_f.lo nb_kernel120_f.lo nb_kernel121_f.lo nb_kernel122_f.lo nb_kernel123_f.lo nb_kernel124_f.lo nb_kernel130_f.lo nb_kernel131_f.lo nb_kernel132_f.lo nb_kernel133_f.lo nb_kernel134_f.lo nb_kernel200_f.lo nb_kernel201_f.lo nb_kernel202_f.lo nb_kernel203_f.lo nb_kernel204_f.lo nb_kernel210_f.lo nb_kernel211_f.lo nb_kernel212_f.lo nb_kernel213_f.lo nb_kernel214_f.lo nb_kernel220_f.lo nb_kernel221_f.lo nb_kernel222_f.lo nb_kernel223_f.lo nb_kernel224_f.lo nb_kernel230_f.lo nb_kernel231_f.lo nb_kernel232_f.lo nb_kernel233_f.lo nb_kernel234_f.lo nb_kernel300_f.lo nb_kernel301_f.lo nb_kernel302_f.lo nb_kernel303_f.lo nb_kernel304_f.lo nb_kernel310_f.lo nb_kernel311_f.lo nb_kernel312_f.lo nb_kernel313_f.lo nb_kernel314_f.lo nb_kernel320_f.lo nb_kernel321_f.lo nb_kernel322_f.lo nb_kernel323_f.lo nb_kernel324_f.lo nb_kernel330_f.lo nb_kernel331_f.lo nb_kernel332_f.lo nb_kernel333_f.lo nb_kernel334_f.lo nb_kernel400_f.lo nb_kernel410_f.lo nb_kernel420_f.lo nb_kernel430_f.lo nb_kernel_f77sync.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libnb_kernel.a .libs/nb_kernel.o .libs/nb_kernel010_f.o .libs/nb_kernel020_f.o .libs/nb_kernel030_f.o .libs/nb_kernel100_f.o .libs/nb_kernel101_f.o .libs/nb_kernel102_f.o .libs/nb_kernel103_f.o .libs/nb_kernel104_f.o .libs/nb_kernel110_f.o .libs/nb_kernel111_f.o .libs/nb_kernel112_f.o .libs/nb_kernel113_f.o .libs/nb_kernel114_f.o .libs/nb_kernel120_f.o .libs/nb_kernel121_f.o .libs/nb_kernel122_f.o .libs/nb_kernel123_f.o .libs/nb_kernel124_f.o .libs/nb_kernel130_f.o .libs/nb_kernel131_f.o .libs/nb_kernel132_f.o .libs/nb_kernel133_f.o .libs/nb_kernel134_f.o .libs/nb_kernel200_f.o .libs/nb_kernel201_f.o .libs/nb_kernel202_f.o .libs/nb_kernel203_f.o .libs/nb_kernel204_f.o .libs/nb_kernel210_f.o .libs/nb_kernel211_f.o .libs/nb_kernel212_f.o .libs/nb_kernel213_f.o .libs/nb_kernel214_f.o .libs/nb_kernel220_f.o .libs/nb_kernel221_f.o .libs/nb_kernel222_f.o .libs/nb_kernel223_f.o .libs/nb_kernel224_f.o .libs/nb_kernel230_f.o .libs/nb_kernel231_f.o .libs/nb_kernel232_f.o .libs/nb_kernel233_f.o .libs/nb_kernel234_f.o .libs/nb_kernel300_f.o .libs/nb_kernel301_f.o .libs/nb_kernel302_f.o .libs/nb_kernel303_f.o .libs/nb_kernel304_f.o .libs/nb_kernel310_f.o .libs/nb_kernel311_f.o .libs/nb_kernel312_f.o .libs/nb_kernel313_f.o .libs/nb_kernel314_f.o .libs/nb_kernel320_f.o .libs/nb_kernel321_f.o .libs/nb_kernel322_f.o .libs/nb_kernel323_f.o .libs/nb_kernel324_f.o .libs/nb_kernel330_f.o .libs/nb_kernel331_f.o .libs/nb_kernel332_f.o .libs/nb_kernel333_f.o .libs/nb_kernel334_f.o .libs/nb_kernel400_f.o .libs/nb_kernel410_f.o .libs/nb_kernel420_f.o .libs/nb_kernel430_f.o .libs/nb_kernel_f77sync.o ranlib .libs/libnb_kernel.a creating libnb_kernel.la (cd .libs && rm -f libnb_kernel.la && ln -s ../libnb_kernel.la libnb_kernel.la) make[6]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nonbonded.lo ../../../../src/gmxlib/nonbonded/nonbonded.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_free_energy.lo ../../../../src/gmxlib/nonbonded/nb_free_energy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nb_generic.lo ../../../../src/gmxlib/nonbonded/nb_generic.c mkdir .libs mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nb_generic.c -fPIC -DPIC -o .libs/nb_generic.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nb_free_energy.c -fPIC -DPIC -o .libs/nb_free_energy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/nonbonded -I../../../src -I../../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/nonbonded/nonbonded.c -fPIC -DPIC -o .libs/nonbonded.o ../../../../src/gmxlib/nonbonded/nb_generic.c: In function 'gmx_nb_generic_kernel': ../../../../src/gmxlib/nonbonded/nb_generic.c:82:16: warning: unused variable 'shift' [-Wunused-variable] int * shift; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c:62:25: warning: unused variable 'gbtabscale' [-Wunused-variable] real facel,gbtabscale; ^ ../../../../src/gmxlib/nonbonded/nb_generic.c:61:19: warning: unused variable 'nri' [-Wunused-variable] int nri,ntype,table_nelements,icoul,ivdw; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nb_generic.c:43: ../../../../src/gmxlib/nonbonded/nb_generic.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nb_generic.c:43:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c: In function 'gmx_nb_free_energy_kernel': ../../../../src/gmxlib/nonbonded/nb_free_energy.c:100:25: warning: unused variable 'H' [-Wunused-variable] real Y,F,G,H,Fp,Geps,Heps2,eps,eps2,VV,FF; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:100:23: warning: unused variable 'G' [-Wunused-variable] real Y,F,G,H,Fp,Geps,Heps2,eps,eps2,VV,FF; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:89:19: warning: unused variable 'rinvsix' [-Wunused-variable] real rinvsix; ^ ../../../../src/gmxlib/nonbonded/nb_free_energy.c:86:27: warning: unused variable 'vcoul' [-Wunused-variable] real qqA,qqB,vcoul,vctot,krsq; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nb_free_energy.c:42: ../../../../src/gmxlib/nonbonded/nb_free_energy.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nb_free_energy.c:42:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../../src/gmxlib/nonbonded/nonbonded.c: In function 'do_nonbonded': ../../../../src/gmxlib/nonbonded/nonbonded.c:283:18: warning: unused variable 'fp' [-Wunused-variable] FILE * fp; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:281:18: warning: unused variable 'bWater' [-Wunused-variable] bool bWater; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:279:43: warning: unused variable 'sz' [-Wunused-variable] int n,n0,n1,i,i0,i1,nrnb_ind,sz; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c: In function 'do_listed_vdw_q': ../../../../src/gmxlib/nonbonded/nonbonded.c:547:15: warning: unused variable 'tmplist' [-Wunused-variable] t_nblist tmplist; ^ ../../../../src/gmxlib/nonbonded/nonbonded.c:538:25: warning: unused variable 'i2' [-Wunused-variable] int i0=0,i1=1,i2=2; ^ In file included from ../../../../include/vec.h:121:0, from ../../../../src/gmxlib/nonbonded/nonbonded.c:50: ../../../../src/gmxlib/nonbonded/nonbonded.c: At top level: ../../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../../src/gmxlib/nonbonded/nonbonded.c:50:0: ../../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../../src/gmxlib/nonbonded/nonbonded.c:53:0: ../../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ /bin/sh ../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libnonbonded.la nonbonded.lo nb_free_energy.lo nb_generic.lo nb_kernel_x86_64_sse2/libnb_kernel_x86_64_sse2.la nb_kernel/libnb_kernel.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath rm -fr .libs/libnonbonded.lax mkdir .libs/libnonbonded.lax rm -fr .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a mkdir .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a (cd .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a && ar x /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/.libs/libnb_kernel_x86_64_sse2.a) rm -fr .libs/libnonbonded.lax/libnb_kernel.a mkdir .libs/libnonbonded.lax/libnb_kernel.a (cd .libs/libnonbonded.lax/libnb_kernel.a && ar x /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel/.libs/libnb_kernel.a) ar cru .libs/libnonbonded.a .libs/nonbonded.o .libs/nb_free_energy.o .libs/nb_generic.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel_x86_64_sse2_test.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel430_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel410_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel400_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel334_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel333_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel332_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel331_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel330_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel314_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel313_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel312_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel311_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel310_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel304_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel303_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel302_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel301_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel300_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel234_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel233_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel232_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel231_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel230_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel214_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel213_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel212_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel211_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel210_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel204_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel203_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel202_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel201_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel200_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel134_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel133_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel132_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel131_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel130_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel114_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel113_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel112_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel111_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel110_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel104_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel103_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel102_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel101_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel100_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel030_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel_x86_64_sse2.a/nb_kernel010_x86_64_sse2.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel_f77sync.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel430_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel420_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel410_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel400_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel334_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel333_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel332_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel331_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel330_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel324_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel323_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel322_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel321_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel320_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel314_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel313_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel312_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel311_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel310_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel304_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel303_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel302_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel301_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel300_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel234_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel233_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel232_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel231_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel230_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel224_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel223_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel222_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel221_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel220_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel214_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel213_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel212_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel211_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel210_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel204_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel203_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel202_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel201_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel200_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel134_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel133_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel132_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel131_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel130_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel124_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel123_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel122_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel121_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel120_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel114_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel113_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel112_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel111_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel110_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel104_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel103_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel102_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel101_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel100_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel030_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel020_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel010_f.o .libs/libnonbonded.lax/libnb_kernel.a/nb_kernel.o ranlib .libs/libnonbonded.a rm -fr .libs/libnonbonded.lax creating libnonbonded.la (cd .libs && rm -f libnonbonded.la && ln -s ../libnonbonded.la libnonbonded.la) make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' Making all in gmx_blas make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_blas' /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dasum.lo ../../../../src/gmxlib/gmx_blas/dasum.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dcopy.lo ../../../../src/gmxlib/gmx_blas/dcopy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgemm.lo ../../../../src/gmxlib/gmx_blas/dgemm.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dger.lo ../../../../src/gmxlib/gmx_blas/dger.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o drot.lo ../../../../src/gmxlib/gmx_blas/drot.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dswap.lo ../../../../src/gmxlib/gmx_blas/dswap.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyr2.lo ../../../../src/gmxlib/gmx_blas/dsyr2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrmm.lo ../../../../src/gmxlib/gmx_blas/dtrmm.c mkdir .libs mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/drot.c -fPIC -DPIC -o .libs/drot.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dasum.c -fPIC -DPIC -o .libs/dasum.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dcopy.c -fPIC -DPIC -o .libs/dcopy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dger.c -fPIC -DPIC -o .libs/dger.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrmm.c -fPIC -DPIC -o .libs/dtrmm.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsyr2.c -fPIC -DPIC -o .libs/dsyr2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dswap.c -fPIC -DPIC -o .libs/dswap.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dgemm.c -fPIC -DPIC -o .libs/dgemm.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrsm.lo ../../../../src/gmxlib/gmx_blas/dtrsm.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o daxpy.lo ../../../../src/gmxlib/gmx_blas/daxpy.c ../../../../src/gmxlib/gmx_blas/dgemm.c: In function 'dgemm_': ../../../../src/gmxlib/gmx_blas/dgemm.c:27:19: warning: variable 'nrowb' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/dgemm.c:27:13: warning: variable 'ncola' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/dgemm.c:27:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ddot.lo ../../../../src/gmxlib/gmx_blas/ddot.c ../../../../src/gmxlib/gmx_blas/dtrmm.c: In function 'dtrmm_': ../../../../src/gmxlib/gmx_blas/dtrmm.c:32:9: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ ../../../../src/gmxlib/gmx_blas/dtrmm.c:29:20: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, k, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgemv.lo ../../../../src/gmxlib/gmx_blas/dgemv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dnrm2.lo ../../../../src/gmxlib/gmx_blas/dnrm2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ddot.c -fPIC -DPIC -o .libs/ddot.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dgemv.c -fPIC -DPIC -o .libs/dgemv.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dscal.lo ../../../../src/gmxlib/gmx_blas/dscal.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsymv.lo ../../../../src/gmxlib/gmx_blas/dsymv.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrsm.c -fPIC -DPIC -o .libs/dtrsm.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyr2k.lo ../../../../src/gmxlib/gmx_blas/dsyr2k.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/daxpy.c -fPIC -DPIC -o .libs/daxpy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dnrm2.c -fPIC -DPIC -o .libs/dnrm2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrmv.lo ../../../../src/gmxlib/gmx_blas/dtrmv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o idamax.lo ../../../../src/gmxlib/gmx_blas/idamax.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dscal.c -fPIC -DPIC -o .libs/dscal.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sasum.lo ../../../../src/gmxlib/gmx_blas/sasum.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsymv.c -fPIC -DPIC -o .libs/dsymv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dsyr2k.c -fPIC -DPIC -o .libs/dsyr2k.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o scopy.lo ../../../../src/gmxlib/gmx_blas/scopy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgemm.lo ../../../../src/gmxlib/gmx_blas/sgemm.c ../../../../src/gmxlib/gmx_blas/dsyr2k.c: In function 'dsyr2k_': ../../../../src/gmxlib/gmx_blas/dsyr2k.c:23:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/idamax.c -fPIC -DPIC -o .libs/idamax.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sasum.c -fPIC -DPIC -o .libs/sasum.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/dtrmv.c -fPIC -DPIC -o .libs/dtrmv.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sger.lo ../../../../src/gmxlib/gmx_blas/sger.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o srot.lo ../../../../src/gmxlib/gmx_blas/srot.c ../../../../src/gmxlib/gmx_blas/dtrmv.c: In function 'dtrmv_': ../../../../src/gmxlib/gmx_blas/dtrmv.c:18:29: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, ix, jx, kx, info; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/scopy.c -fPIC -DPIC -o .libs/scopy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sgemm.c -fPIC -DPIC -o .libs/sgemm.o ../../../../src/gmxlib/gmx_blas/sgemm.c: In function 'sgemm_': ../../../../src/gmxlib/gmx_blas/sgemm.c:26:19: warning: variable 'nrowb' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/sgemm.c:26:13: warning: variable 'ncola' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ ../../../../src/gmxlib/gmx_blas/sgemm.c:26:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa,ncola,nrowb; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sswap.lo ../../../../src/gmxlib/gmx_blas/sswap.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sger.c -fPIC -DPIC -o .libs/sger.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyr2.lo ../../../../src/gmxlib/gmx_blas/ssyr2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strmm.lo ../../../../src/gmxlib/gmx_blas/strmm.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/srot.c -fPIC -DPIC -o .libs/srot.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strsm.lo ../../../../src/gmxlib/gmx_blas/strsm.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o saxpy.lo ../../../../src/gmxlib/gmx_blas/saxpy.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sswap.c -fPIC -DPIC -o .libs/sswap.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sdot.lo ../../../../src/gmxlib/gmx_blas/sdot.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strmm.c -fPIC -DPIC -o .libs/strmm.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgemv.lo ../../../../src/gmxlib/gmx_blas/sgemv.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssyr2.c -fPIC -DPIC -o .libs/ssyr2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o snrm2.lo ../../../../src/gmxlib/gmx_blas/snrm2.c ../../../../src/gmxlib/gmx_blas/strmm.c: In function 'strmm_': ../../../../src/gmxlib/gmx_blas/strmm.c:31:9: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ ../../../../src/gmxlib/gmx_blas/strmm.c:28:20: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, k, info; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/saxpy.c -fPIC -DPIC -o .libs/saxpy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strsm.c -fPIC -DPIC -o .libs/strsm.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sdot.c -fPIC -DPIC -o .libs/sdot.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sscal.lo ../../../../src/gmxlib/gmx_blas/sscal.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/snrm2.c -fPIC -DPIC -o .libs/snrm2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sgemv.c -fPIC -DPIC -o .libs/sgemv.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssymv.lo ../../../../src/gmxlib/gmx_blas/ssymv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyr2k.lo ../../../../src/gmxlib/gmx_blas/ssyr2k.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strmv.lo ../../../../src/gmxlib/gmx_blas/strmv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o isamax.lo ../../../../src/gmxlib/gmx_blas/isamax.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/sscal.c -fPIC -DPIC -o .libs/sscal.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssymv.c -fPIC -DPIC -o .libs/ssymv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/ssyr2k.c -fPIC -DPIC -o .libs/ssyr2k.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/strmv.c -fPIC -DPIC -o .libs/strmv.o ../../../../src/gmxlib/gmx_blas/strmv.c: In function 'strmv_': ../../../../src/gmxlib/gmx_blas/strmv.c:18:29: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, ix, jx, kx, info; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_blas -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_blas/isamax.c -fPIC -DPIC -o .libs/isamax.o ../../../../src/gmxlib/gmx_blas/ssyr2k.c: In function 'ssyr2k_': ../../../../src/gmxlib/gmx_blas/ssyr2k.c:22:7: warning: variable 'nrowa' set but not used [-Wunused-but-set-variable] int nrowa; ^ /bin/sh ../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libblas.la dasum.lo dcopy.lo dgemm.lo dger.lo drot.lo dswap.lo dsyr2.lo dtrmm.lo dtrsm.lo daxpy.lo ddot.lo dgemv.lo dnrm2.lo dscal.lo dsymv.lo dsyr2k.lo dtrmv.lo idamax.lo sasum.lo scopy.lo sgemm.lo sger.lo srot.lo sswap.lo ssyr2.lo strmm.lo strsm.lo saxpy.lo sdot.lo sgemv.lo snrm2.lo sscal.lo ssymv.lo ssyr2k.lo strmv.lo isamax.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/libblas.a .libs/dasum.o .libs/dcopy.o .libs/dgemm.o .libs/dger.o .libs/drot.o .libs/dswap.o .libs/dsyr2.o .libs/dtrmm.o .libs/dtrsm.o .libs/daxpy.o .libs/ddot.o .libs/dgemv.o .libs/dnrm2.o .libs/dscal.o .libs/dsymv.o .libs/dsyr2k.o .libs/dtrmv.o .libs/idamax.o .libs/sasum.o .libs/scopy.o .libs/sgemm.o .libs/sger.o .libs/srot.o .libs/sswap.o .libs/ssyr2.o .libs/strmm.o .libs/strsm.o .libs/saxpy.o .libs/sdot.o .libs/sgemv.o .libs/snrm2.o .libs/sscal.o .libs/ssymv.o .libs/ssyr2k.o .libs/strmv.o .libs/isamax.o ranlib .libs/libblas.a creating libblas.la (cd .libs && rm -f libblas.la && ln -s ../libblas.la libblas.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_blas' Making all in gmx_lapack make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_lapack' /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dbdsdc.lo ../../../../src/gmxlib/gmx_lapack/dbdsdc.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetf2.lo ../../../../src/gmxlib/gmx_lapack/dgetf2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlamrg.lo ../../../../src/gmxlib/gmx_lapack/dlamrg.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarnv.lo ../../../../src/gmxlib/gmx_lapack/dlarnv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd0.lo ../../../../src/gmxlib/gmx_lapack/dlasd0.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasda.lo ../../../../src/gmxlib/gmx_lapack/dlasda.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq6.lo ../../../../src/gmxlib/gmx_lapack/dlasq6.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgl2.lo ../../../../src/gmxlib/gmx_lapack/dorgl2.c mkdir .libs mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetf2.c -fPIC -DPIC -o .libs/dgetf2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dbdsdc.c -fPIC -DPIC -o .libs/dbdsdc.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgl2.c -fPIC -DPIC -o .libs/dorgl2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlamrg.c -fPIC -DPIC -o .libs/dlamrg.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasda.c -fPIC -DPIC -o .libs/dlasda.o ../../../../src/gmxlib/gmx_lapack/dgetf2.c: In function 'dgetf2_': ../../../../src/gmxlib/gmx_lapack/dgetf2.c:17:10: warning: variable 'one' set but not used [-Wunused-but-set-variable] double one,minusone; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd0.c -fPIC -DPIC -o .libs/dlasd0.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormqr.lo ../../../../src/gmxlib/gmx_lapack/dormqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq6.c -fPIC -DPIC -o .libs/dlasq6.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarnv.c -fPIC -DPIC -o .libs/dlarnv.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dbdsqr.lo ../../../../src/gmxlib/gmx_lapack/dbdsqr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetrf.lo ../../../../src/gmxlib/gmx_lapack/dgetrf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlange.lo ../../../../src/gmxlib/gmx_lapack/dlange.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd1.lo ../../../../src/gmxlib/gmx_lapack/dlasd1.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrtri.lo ../../../../src/gmxlib/gmx_lapack/dtrtri.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormqr.c -fPIC -DPIC -o .libs/dormqr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dbdsqr.c -fPIC -DPIC -o .libs/dbdsqr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasdq.lo ../../../../src/gmxlib/gmx_lapack/dlasdq.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetrf.c -fPIC -DPIC -o .libs/dgetrf.o ../../../../src/gmxlib/gmx_lapack/dbdsqr.c: In function 'dbdsqr_': mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd1.c -fPIC -DPIC -o .libs/dlasd1.o ../../../../src/gmxlib/gmx_lapack/dbdsqr.c:61:12: warning: unused variable 'ftmp' [-Wunused-variable] double ftmp; ^ ../../../../src/gmxlib/gmx_lapack/dbdsqr.c:59:12: warning: variable 'sminlo' set but not used [-Wunused-but-set-variable] double sminlo, tolmul; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlange.c -fPIC -DPIC -o .libs/dlange.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasr.lo ../../../../src/gmxlib/gmx_lapack/dlasr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dtrtri.c -fPIC -DPIC -o .libs/dtrtri.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorglq.lo ../../../../src/gmxlib/gmx_lapack/dorglq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormtr.lo ../../../../src/gmxlib/gmx_lapack/dormtr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasdq.c -fPIC -DPIC -o .libs/dlasdq.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasr.c -fPIC -DPIC -o .libs/dlasr.o ../../../../src/gmxlib/gmx_lapack/dlasr.c: In function 'dlasr_': ../../../../src/gmxlib/gmx_lapack/dlasr.c:21:17: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgebd2.lo ../../../../src/gmxlib/gmx_lapack/dgebd2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlabrd.lo ../../../../src/gmxlib/gmx_lapack/dlabrd.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlanst.lo ../../../../src/gmxlib/gmx_lapack/dlanst.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorglq.c -fPIC -DPIC -o .libs/dorglq.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormtr.c -fPIC -DPIC -o .libs/dormtr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd2.lo ../../../../src/gmxlib/gmx_lapack/dlasd2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgebd2.c -fPIC -DPIC -o .libs/dgebd2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlabrd.c -fPIC -DPIC -o .libs/dlabrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlanst.c -fPIC -DPIC -o .libs/dlanst.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasdt.lo ../../../../src/gmxlib/gmx_lapack/dlasdt.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasrt.lo ../../../../src/gmxlib/gmx_lapack/dlasrt.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgqr.lo ../../../../src/gmxlib/gmx_lapack/dorgqr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dstebz.lo ../../../../src/gmxlib/gmx_lapack/dstebz.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgebrd.lo ../../../../src/gmxlib/gmx_lapack/dgebrd.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsytrd.lo ../../../../src/gmxlib/gmx_lapack/dsytrd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgqr.c -fPIC -DPIC -o .libs/dorgqr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd2.c -fPIC -DPIC -o .libs/dlasd2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasdt.c -fPIC -DPIC -o .libs/dlasdt.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgebrd.c -fPIC -DPIC -o .libs/dgebrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dstebz.c -fPIC -DPIC -o .libs/dstebz.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasrt.c -fPIC -DPIC -o .libs/dlasrt.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlacpy.lo ../../../../src/gmxlib/gmx_lapack/dlacpy.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsytrd.c -fPIC -DPIC -o .libs/dsytrd.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlapy2.lo ../../../../src/gmxlib/gmx_lapack/dlapy2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd3.lo ../../../../src/gmxlib/gmx_lapack/dlasd3.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaset.lo ../../../../src/gmxlib/gmx_lapack/dlaset.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c 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-I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorm2l.lo ../../../../src/gmxlib/gmx_lapack/dorm2l.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd3.c -fPIC -DPIC -o .libs/dlasd3.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlassq.c -fPIC -DPIC -o .libs/dlassq.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetrs.lo ../../../../src/gmxlib/gmx_lapack/dgetrs.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorm2l.c -fPIC -DPIC -o .libs/dorm2l.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dstegr.lo ../../../../src/gmxlib/gmx_lapack/dstegr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgelq2.lo ../../../../src/gmxlib/gmx_lapack/dgelq2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlae2.lo ../../../../src/gmxlib/gmx_lapack/dlae2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd4.lo ../../../../src/gmxlib/gmx_lapack/dlasd4.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetrs.c -fPIC -DPIC -o .libs/dgetrs.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq1.lo ../../../../src/gmxlib/gmx_lapack/dlasq1.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dstegr.c -fPIC -DPIC -o .libs/dstegr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dtrti2.lo ../../../../src/gmxlib/gmx_lapack/dtrti2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgelq2.c -fPIC -DPIC -o .libs/dgelq2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgetri.lo ../../../../src/gmxlib/gmx_lapack/dgetri.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlae2.c -fPIC -DPIC -o .libs/dlae2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd4.c -fPIC -DPIC -o .libs/dlasd4.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq1.c -fPIC -DPIC -o .libs/dlasq1.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasv2.lo 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-I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgelqf.lo ../../../../src/gmxlib/gmx_lapack/dgelqf.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgetri.c -fPIC -DPIC -o .libs/dgetri.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaebz.lo ../../../../src/gmxlib/gmx_lapack/dlaebz.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasv2.c -fPIC -DPIC -o .libs/dlasv2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dstein.c -fPIC -DPIC -o .libs/dstein.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarf.lo ../../../../src/gmxlib/gmx_lapack/dlarf.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaebz.c -fPIC -DPIC -o .libs/dlaebz.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgelqf.c -fPIC -DPIC -o .libs/dgelqf.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorm2r.c -fPIC -DPIC -o .libs/dorm2r.o ../../../../src/gmxlib/gmx_lapack/dorm2r.c: In function 'dorm2r_': ../../../../src/gmxlib/gmx_lapack/dorm2r.c:19:42: warning: variable 'nq' set but not used [-Wunused-but-set-variable] int i__, i1, i2, i3, ic, jc, mi, ni, nq; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlartg.lo ../../../../src/gmxlib/gmx_lapack/dlartg.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd5.lo ../../../../src/gmxlib/gmx_lapack/dlasd5.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq2.lo ../../../../src/gmxlib/gmx_lapack/dlasq2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarf.c -fPIC -DPIC -o .libs/dlarf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaswp.lo ../../../../src/gmxlib/gmx_lapack/dlaswp.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd5.c -fPIC -DPIC -o .libs/dlasd5.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq2.c -fPIC -DPIC -o .libs/dlasq2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlartg.c -fPIC -DPIC -o .libs/dlartg.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormbr.lo ../../../../src/gmxlib/gmx_lapack/dormbr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsterf.lo ../../../../src/gmxlib/gmx_lapack/dsterf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgeqr2.lo ../../../../src/gmxlib/gmx_lapack/dgeqr2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaed6.lo ../../../../src/gmxlib/gmx_lapack/dlaed6.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaswp.c -fPIC -DPIC -o .libs/dlaswp.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormbr.c -fPIC -DPIC -o .libs/dormbr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsterf.c -fPIC -DPIC -o .libs/dsterf.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaed6.c -fPIC -DPIC -o .libs/dlaed6.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarfb.lo ../../../../src/gmxlib/gmx_lapack/dlarfb.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgeqr2.c -fPIC -DPIC -o .libs/dgeqr2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaruv.lo ../../../../src/gmxlib/gmx_lapack/dlaruv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd6.lo ../../../../src/gmxlib/gmx_lapack/dlasd6.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq3.lo ../../../../src/gmxlib/gmx_lapack/dlasq3.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlatrd.lo ../../../../src/gmxlib/gmx_lapack/dlatrd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarfb.c -fPIC -DPIC -o .libs/dlarfb.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorml2.lo ../../../../src/gmxlib/gmx_lapack/dorml2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaruv.c -fPIC -DPIC -o .libs/dlaruv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd6.c -fPIC -DPIC -o .libs/dlasd6.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq3.c -fPIC -DPIC -o .libs/dlasq3.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlatrd.c -fPIC -DPIC -o .libs/dlatrd.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dstevr.lo ../../../../src/gmxlib/gmx_lapack/dstevr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgeqrf.lo ../../../../src/gmxlib/gmx_lapack/dgeqrf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlagtf.lo ../../../../src/gmxlib/gmx_lapack/dlagtf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarfg.lo ../../../../src/gmxlib/gmx_lapack/dlarfg.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorml2.c -fPIC -DPIC -o .libs/dorml2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlas2.lo ../../../../src/gmxlib/gmx_lapack/dlas2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd7.lo ../../../../src/gmxlib/gmx_lapack/dlasd7.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dstevr.c -fPIC -DPIC -o .libs/dstevr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgeqrf.c -fPIC -DPIC -o .libs/dgeqrf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq4.lo ../../../../src/gmxlib/gmx_lapack/dlasq4.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlagtf.c -fPIC -DPIC -o .libs/dlagtf.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarfg.c -fPIC -DPIC -o .libs/dlarfg.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorg2r.lo ../../../../src/gmxlib/gmx_lapack/dorg2r.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormlq.lo ../../../../src/gmxlib/gmx_lapack/dormlq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsytd2.lo ../../../../src/gmxlib/gmx_lapack/dsytd2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dgesdd.lo ../../../../src/gmxlib/gmx_lapack/dgesdd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlas2.c -fPIC -DPIC -o .libs/dlas2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq4.c -fPIC -DPIC -o .libs/dlasq4.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd7.c -fPIC -DPIC -o .libs/dlasd7.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlagts.lo ../../../../src/gmxlib/gmx_lapack/dlagts.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorg2r.c -fPIC -DPIC -o .libs/dorg2r.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormlq.c -fPIC -DPIC -o .libs/dormlq.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarft.lo ../../../../src/gmxlib/gmx_lapack/dlarft.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsytd2.c -fPIC -DPIC -o .libs/dsytd2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dgesdd.c -fPIC -DPIC -o .libs/dgesdd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlagts.c -fPIC -DPIC -o .libs/dlagts.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlascl.lo ../../../../src/gmxlib/gmx_lapack/dlascl.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasd8.lo ../../../../src/gmxlib/gmx_lapack/dlasd8.c ../../../../src/gmxlib/gmx_lapack/dgesdd.c: In function 'dgesdd_': ../../../../src/gmxlib/gmx_lapack/dgesdd.c:40:9: warning: variable 'wntqas' set but not used [-Wunused-but-set-variable] int wntqas, lquery; ^ ../../../../src/gmxlib/gmx_lapack/dgesdd.c:38:9: warning: variable 'minwrk' set but not used [-Wunused-but-set-variable] int minwrk, ldwrku, maxwrk, ldwkvt; ^ ../../../../src/gmxlib/gmx_lapack/dgesdd.c:35:16: warning: variable 'wntqo' set but not used [-Wunused-but-set-variable] int wntqn, wntqo, wntqs; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasq5.lo ../../../../src/gmxlib/gmx_lapack/dlasq5.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarft.c -fPIC -DPIC -o .libs/dlarft.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dorgbr.lo ../../../../src/gmxlib/gmx_lapack/dorgbr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dormql.lo ../../../../src/gmxlib/gmx_lapack/dormql.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasq5.c -fPIC -DPIC -o .libs/dlasq5.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasd8.c -fPIC -DPIC -o .libs/dlasd8.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlascl.c -fPIC -DPIC -o .libs/dlascl.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlaev2.lo ../../../../src/gmxlib/gmx_lapack/dlaev2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dorgbr.c -fPIC -DPIC -o .libs/dorgbr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsteqr.lo ../../../../src/gmxlib/gmx_lapack/dsteqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dormql.c -fPIC -DPIC -o .libs/dormql.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dsyevr.lo ../../../../src/gmxlib/gmx_lapack/dsyevr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlaev2.c -fPIC -DPIC -o .libs/dlaev2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlasrt2.lo ../../../../src/gmxlib/gmx_lapack/dlasrt2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlansy.lo ../../../../src/gmxlib/gmx_lapack/dlansy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlar1vx.lo ../../../../src/gmxlib/gmx_lapack/dlar1vx.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrbx.lo ../../../../src/gmxlib/gmx_lapack/dlarrbx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsteqr.c -fPIC -DPIC -o .libs/dsteqr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrex.lo ../../../../src/gmxlib/gmx_lapack/dlarrex.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrfx.lo ../../../../src/gmxlib/gmx_lapack/dlarrfx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dsyevr.c -fPIC -DPIC -o .libs/dsyevr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlasrt2.c -fPIC -DPIC -o .libs/dlasrt2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlansy.c -fPIC -DPIC -o .libs/dlansy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlar1vx.c -fPIC -DPIC -o .libs/dlar1vx.o ../../../../src/gmxlib/gmx_lapack/dsyevr.c: In function 'dsyevr_': ../../../../src/gmxlib/gmx_lapack/dsyevr.c:36:12: warning: variable 'abstll' set but not used [-Wunused-but-set-variable] double abstll, bignum; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:33:17: warning: variable 'ieeeok' set but not used [-Wunused-but-set-variable] int iscale, ieeeok, indibl, indifl; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:21:22: warning: variable 'vuu' set but not used [-Wunused-but-set-variable] double eps, vll, vuu, tmp1; ^ ../../../../src/gmxlib/gmx_lapack/dsyevr.c:21:17: warning: variable 'vll' set but not used [-Wunused-but-set-variable] double eps, vll, vuu, tmp1; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlarrvx.lo ../../../../src/gmxlib/gmx_lapack/dlarrvx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrbx.c -fPIC -DPIC -o .libs/dlarrbx.o ../../../../src/gmxlib/gmx_lapack/dlarrbx.c: In function 'dlarrbx_': ../../../../src/gmxlib/gmx_lapack/dlarrbx.c:36:33: warning: variable 'error' set but not used [-Wunused-but-set-variable] double right, width, dplus, error; ^ ../../../../src/gmxlib/gmx_lapack/dlarrbx.c:34:12: warning: variable 'eps' set but not used [-Wunused-but-set-variable] double eps, tmp, left; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrex.c -fPIC -DPIC -o .libs/dlarrex.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrfx.c -fPIC -DPIC -o .libs/dlarrfx.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sbdsdc.lo ../../../../src/gmxlib/gmx_lapack/sbdsdc.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/dlarrvx.c -fPIC -DPIC -o .libs/dlarrvx.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetf2.lo ../../../../src/gmxlib/gmx_lapack/sgetf2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slamrg.lo ../../../../src/gmxlib/gmx_lapack/slamrg.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sbdsdc.c -fPIC -DPIC -o .libs/sbdsdc.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarnv.lo ../../../../src/gmxlib/gmx_lapack/slarnv.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slamrg.c -fPIC -DPIC -o .libs/slamrg.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetf2.c -fPIC -DPIC -o .libs/sgetf2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd0.lo ../../../../src/gmxlib/gmx_lapack/slasd0.c ../../../../src/gmxlib/gmx_lapack/sgetf2.c: In function 'sgetf2_': ../../../../src/gmxlib/gmx_lapack/sgetf2.c:17:9: warning: variable 'one' set but not used [-Wunused-but-set-variable] float one,minusone; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarnv.c -fPIC -DPIC -o .libs/slarnv.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasda.lo ../../../../src/gmxlib/gmx_lapack/slasda.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq6.lo ../../../../src/gmxlib/gmx_lapack/slasq6.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgl2.lo ../../../../src/gmxlib/gmx_lapack/sorgl2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormqr.lo ../../../../src/gmxlib/gmx_lapack/sormqr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sbdsqr.lo ../../../../src/gmxlib/gmx_lapack/sbdsqr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetrf.lo ../../../../src/gmxlib/gmx_lapack/sgetrf.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasda.c -fPIC -DPIC -o .libs/slasda.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd0.c -fPIC -DPIC -o .libs/slasd0.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq6.c -fPIC -DPIC -o .libs/slasq6.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormqr.c -fPIC -DPIC -o .libs/sormqr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sbdsqr.c -fPIC -DPIC -o .libs/sbdsqr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgl2.c -fPIC -DPIC -o .libs/sorgl2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slange.lo ../../../../src/gmxlib/gmx_lapack/slange.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd1.lo ../../../../src/gmxlib/gmx_lapack/slasd1.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetrf.c -fPIC -DPIC -o .libs/sgetrf.o ../../../../src/gmxlib/gmx_lapack/sbdsqr.c: In function 'sbdsqr_': ../../../../src/gmxlib/gmx_lapack/sbdsqr.c:61:11: warning: unused variable 'ftmp' [-Wunused-variable] float ftmp; ^ ../../../../src/gmxlib/gmx_lapack/sbdsqr.c:59:11: warning: variable 'sminlo' set but not used [-Wunused-but-set-variable] float sminlo, tolmul; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssytrd.lo ../../../../src/gmxlib/gmx_lapack/ssytrd.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasdq.lo ../../../../src/gmxlib/gmx_lapack/slasdq.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd1.c -fPIC -DPIC -o .libs/slasd1.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slange.c -fPIC -DPIC -o .libs/slange.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasr.lo ../../../../src/gmxlib/gmx_lapack/slasr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorglq.lo ../../../../src/gmxlib/gmx_lapack/sorglq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormtr.lo ../../../../src/gmxlib/gmx_lapack/sormtr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgebd2.lo ../../../../src/gmxlib/gmx_lapack/sgebd2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssytrd.c -fPIC -DPIC -o .libs/ssytrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasdq.c -fPIC -DPIC -o .libs/slasdq.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasr.c -fPIC -DPIC -o .libs/slasr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormtr.c -fPIC -DPIC -o .libs/sormtr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorglq.c -fPIC -DPIC -o .libs/sorglq.o ../../../../src/gmxlib/gmx_lapack/slasr.c: In function 'slasr_': ../../../../src/gmxlib/gmx_lapack/slasr.c:21:17: warning: variable 'info' set but not used [-Wunused-but-set-variable] int i__, j, info; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slabrd.lo ../../../../src/gmxlib/gmx_lapack/slabrd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgebd2.c -fPIC -DPIC -o .libs/sgebd2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slanst.lo ../../../../src/gmxlib/gmx_lapack/slanst.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd2.lo ../../../../src/gmxlib/gmx_lapack/slasd2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasdt.lo ../../../../src/gmxlib/gmx_lapack/slasdt.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasrt.lo ../../../../src/gmxlib/gmx_lapack/slasrt.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgqr.lo ../../../../src/gmxlib/gmx_lapack/sorgqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd2.c -fPIC -DPIC -o .libs/slasd2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slanst.c -fPIC -DPIC -o .libs/slanst.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slabrd.c -fPIC -DPIC -o .libs/slabrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasrt.c -fPIC -DPIC -o .libs/slasrt.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgqr.c -fPIC -DPIC -o .libs/sorgqr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasdt.c -fPIC -DPIC -o .libs/slasdt.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstebz.lo ../../../../src/gmxlib/gmx_lapack/sstebz.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgebrd.lo ../../../../src/gmxlib/gmx_lapack/sgebrd.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetrs.lo ../../../../src/gmxlib/gmx_lapack/sgetrs.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slacpy.lo ../../../../src/gmxlib/gmx_lapack/slacpy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slapy2.lo ../../../../src/gmxlib/gmx_lapack/slapy2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstebz.c -fPIC -DPIC -o .libs/sstebz.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd3.lo ../../../../src/gmxlib/gmx_lapack/slasd3.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slacpy.c -fPIC -DPIC -o .libs/slacpy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetrs.c -fPIC -DPIC -o .libs/sgetrs.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgebrd.c -fPIC -DPIC -o .libs/sgebrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slapy2.c -fPIC -DPIC -o .libs/slapy2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaset.lo ../../../../src/gmxlib/gmx_lapack/slaset.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slassq.lo ../../../../src/gmxlib/gmx_lapack/slassq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorm2l.lo ../../../../src/gmxlib/gmx_lapack/sorm2l.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd3.c -fPIC -DPIC -o .libs/slasd3.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgetri.lo ../../../../src/gmxlib/gmx_lapack/sgetri.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slassq.c -fPIC -DPIC -o .libs/slassq.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorm2l.c -fPIC -DPIC -o .libs/sorm2l.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstegr.lo ../../../../src/gmxlib/gmx_lapack/sstegr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgetri.c -fPIC -DPIC -o .libs/sgetri.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaset.c -fPIC -DPIC -o .libs/slaset.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgelq2.lo ../../../../src/gmxlib/gmx_lapack/sgelq2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slae2.lo ../../../../src/gmxlib/gmx_lapack/slae2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd4.lo ../../../../src/gmxlib/gmx_lapack/slasd4.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq1.lo ../../../../src/gmxlib/gmx_lapack/slasq1.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strti2.lo ../../../../src/gmxlib/gmx_lapack/strti2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strtri.lo ../../../../src/gmxlib/gmx_lapack/strtri.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgelq2.c -fPIC -DPIC -o .libs/sgelq2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasv2.lo ../../../../src/gmxlib/gmx_lapack/slasv2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstegr.c -fPIC -DPIC -o .libs/sstegr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slae2.c -fPIC -DPIC -o .libs/slae2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd4.c -fPIC -DPIC -o .libs/slasd4.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorm2r.lo ../../../../src/gmxlib/gmx_lapack/sorm2r.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq1.c -fPIC -DPIC -o .libs/slasq1.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/strti2.c -fPIC -DPIC -o .libs/strti2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstein.lo ../../../../src/gmxlib/gmx_lapack/sstein.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/strtri.c -fPIC -DPIC -o .libs/strtri.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasv2.c -fPIC -DPIC -o .libs/slasv2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgelqf.lo ../../../../src/gmxlib/gmx_lapack/sgelqf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaebz.lo ../../../../src/gmxlib/gmx_lapack/slaebz.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarf.lo ../../../../src/gmxlib/gmx_lapack/slarf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slartg.lo ../../../../src/gmxlib/gmx_lapack/slartg.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorm2r.c -fPIC -DPIC -o .libs/sorm2r.o ../../../../src/gmxlib/gmx_lapack/sorm2r.c: In function 'sorm2r_': ../../../../src/gmxlib/gmx_lapack/sorm2r.c:19:42: warning: variable 'nq' set but not used [-Wunused-but-set-variable] int i__, i1, i2, i3, ic, jc, mi, ni, nq; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstein.c -fPIC -DPIC -o .libs/sstein.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd5.lo ../../../../src/gmxlib/gmx_lapack/slasd5.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaebz.c -fPIC -DPIC -o .libs/slaebz.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq2.lo ../../../../src/gmxlib/gmx_lapack/slasq2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarf.c -fPIC -DPIC -o .libs/slarf.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgelqf.c -fPIC -DPIC -o .libs/sgelqf.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slartg.c -fPIC -DPIC -o .libs/slartg.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaswp.lo ../../../../src/gmxlib/gmx_lapack/slaswp.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq2.c -fPIC -DPIC -o .libs/slasq2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormbr.lo ../../../../src/gmxlib/gmx_lapack/sormbr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd5.c -fPIC -DPIC -o .libs/slasd5.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssterf.lo ../../../../src/gmxlib/gmx_lapack/ssterf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgeqr2.lo ../../../../src/gmxlib/gmx_lapack/sgeqr2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaed6.lo ../../../../src/gmxlib/gmx_lapack/slaed6.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarfb.lo ../../../../src/gmxlib/gmx_lapack/slarfb.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaswp.c -fPIC -DPIC -o .libs/slaswp.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormbr.c -fPIC -DPIC -o .libs/sormbr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgeqr2.c -fPIC -DPIC -o .libs/sgeqr2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssterf.c -fPIC -DPIC -o .libs/ssterf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaruv.lo ../../../../src/gmxlib/gmx_lapack/slaruv.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd6.lo ../../../../src/gmxlib/gmx_lapack/slasd6.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaed6.c -fPIC -DPIC -o .libs/slaed6.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq3.lo ../../../../src/gmxlib/gmx_lapack/slasq3.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarfb.c -fPIC -DPIC -o .libs/slarfb.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slatrd.lo ../../../../src/gmxlib/gmx_lapack/slatrd.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaruv.c -fPIC -DPIC -o .libs/slaruv.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd6.c -fPIC -DPIC -o .libs/slasd6.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slatrd.c -fPIC -DPIC -o .libs/slatrd.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq3.c -fPIC -DPIC -o .libs/slasq3.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorml2.lo ../../../../src/gmxlib/gmx_lapack/sorml2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sstevr.lo ../../../../src/gmxlib/gmx_lapack/sstevr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgeqrf.lo ../../../../src/gmxlib/gmx_lapack/sgeqrf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slagtf.lo ../../../../src/gmxlib/gmx_lapack/slagtf.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarfg.lo ../../../../src/gmxlib/gmx_lapack/slarfg.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slas2.lo ../../../../src/gmxlib/gmx_lapack/slas2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sstevr.c -fPIC -DPIC -o .libs/sstevr.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorml2.c -fPIC -DPIC -o .libs/sorml2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgeqrf.c -fPIC -DPIC -o .libs/sgeqrf.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd7.lo ../../../../src/gmxlib/gmx_lapack/slasd7.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq4.lo ../../../../src/gmxlib/gmx_lapack/slasq4.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slas2.c -fPIC -DPIC -o .libs/slas2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slagtf.c -fPIC -DPIC -o .libs/slagtf.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarfg.c -fPIC -DPIC -o .libs/slarfg.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorg2r.lo ../../../../src/gmxlib/gmx_lapack/sorg2r.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormlq.lo ../../../../src/gmxlib/gmx_lapack/sormlq.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssytd2.lo ../../../../src/gmxlib/gmx_lapack/ssytd2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd7.c -fPIC -DPIC -o .libs/slasd7.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq4.c -fPIC -DPIC -o .libs/slasq4.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sgesdd.lo ../../../../src/gmxlib/gmx_lapack/sgesdd.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slagts.lo ../../../../src/gmxlib/gmx_lapack/slagts.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormlq.c -fPIC -DPIC -o .libs/sormlq.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarft.lo ../../../../src/gmxlib/gmx_lapack/slarft.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorg2r.c -fPIC -DPIC -o .libs/sorg2r.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssytd2.c -fPIC -DPIC -o .libs/ssytd2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sgesdd.c -fPIC -DPIC -o .libs/sgesdd.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slascl.lo ../../../../src/gmxlib/gmx_lapack/slascl.c ../../../../src/gmxlib/gmx_lapack/sgesdd.c: In function 'sgesdd_': ../../../../src/gmxlib/gmx_lapack/sgesdd.c:40:9: warning: variable 'wntqas' set but not used [-Wunused-but-set-variable] int wntqas, lquery; ^ ../../../../src/gmxlib/gmx_lapack/sgesdd.c:38:9: warning: variable 'minwrk' set but not used [-Wunused-but-set-variable] int minwrk, ldwrku, maxwrk, ldwkvt; ^ ../../../../src/gmxlib/gmx_lapack/sgesdd.c:35:16: warning: variable 'wntqo' set but not used [-Wunused-but-set-variable] int wntqn, wntqo, wntqs; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slagts.c -fPIC -DPIC -o .libs/slagts.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarft.c -fPIC -DPIC -o .libs/slarft.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasd8.lo ../../../../src/gmxlib/gmx_lapack/slasd8.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasq5.lo ../../../../src/gmxlib/gmx_lapack/slasq5.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slascl.c -fPIC -DPIC -o .libs/slascl.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorgbr.lo ../../../../src/gmxlib/gmx_lapack/sorgbr.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sormql.lo ../../../../src/gmxlib/gmx_lapack/sormql.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasd8.c -fPIC -DPIC -o .libs/slasd8.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slaev2.lo ../../../../src/gmxlib/gmx_lapack/slaev2.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssteqr.lo ../../../../src/gmxlib/gmx_lapack/ssteqr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sormql.c -fPIC -DPIC -o .libs/sormql.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasq5.c -fPIC -DPIC -o .libs/slasq5.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/sorgbr.c -fPIC -DPIC -o .libs/sorgbr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ssyevr.lo ../../../../src/gmxlib/gmx_lapack/ssyevr.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slaev2.c -fPIC -DPIC -o .libs/slaev2.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slasrt2.lo ../../../../src/gmxlib/gmx_lapack/slasrt2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssteqr.c -fPIC -DPIC -o .libs/ssteqr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slansy.lo ../../../../src/gmxlib/gmx_lapack/slansy.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slar1vx.lo ../../../../src/gmxlib/gmx_lapack/slar1vx.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slasrt2.c -fPIC -DPIC -o .libs/slasrt2.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ssyevr.c -fPIC -DPIC -o .libs/ssyevr.o /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrbx.lo ../../../../src/gmxlib/gmx_lapack/slarrbx.c ../../../../src/gmxlib/gmx_lapack/ssyevr.c: In function 'ssyevr_': ../../../../src/gmxlib/gmx_lapack/ssyevr.c:36:11: warning: variable 'abstll' set but not used [-Wunused-but-set-variable] float abstll, bignum; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:33:17: warning: variable 'ieeeok' set but not used [-Wunused-but-set-variable] int iscale, ieeeok, indibl, indifl; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:21:21: warning: variable 'vuu' set but not used [-Wunused-but-set-variable] float eps, vll, vuu, tmp1; ^ ../../../../src/gmxlib/gmx_lapack/ssyevr.c:21:16: warning: variable 'vll' set but not used [-Wunused-but-set-variable] float eps, vll, vuu, tmp1; ^ /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrex.lo ../../../../src/gmxlib/gmx_lapack/slarrex.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrfx.lo ../../../../src/gmxlib/gmx_lapack/slarrfx.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o slarrvx.lo ../../../../src/gmxlib/gmx_lapack/slarrvx.c /bin/sh ../../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ilasrt2.lo ../../../../src/gmxlib/gmx_lapack/ilasrt2.c mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slansy.c -fPIC -DPIC -o .libs/slansy.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slar1vx.c -fPIC -DPIC -o .libs/slar1vx.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrex.c -fPIC -DPIC -o .libs/slarrex.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrbx.c -fPIC -DPIC -o .libs/slarrbx.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrfx.c -fPIC -DPIC -o .libs/slarrfx.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/slarrvx.c -fPIC -DPIC -o .libs/slarrvx.o mpicc -DHAVE_CONFIG_H -I. -I../../../../src/gmxlib/gmx_lapack -I../../../src -I../../../../include -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../../src/gmxlib/gmx_lapack/ilasrt2.c -fPIC -DPIC -o .libs/ilasrt2.o ../../../../src/gmxlib/gmx_lapack/slarrbx.c: In function 'slarrbx_': ../../../../src/gmxlib/gmx_lapack/slarrbx.c:36:32: warning: variable 'error' set but not used [-Wunused-but-set-variable] float right, width, dplus, error; ^ ../../../../src/gmxlib/gmx_lapack/slarrbx.c:34:11: warning: variable 'eps' set but not used [-Wunused-but-set-variable] float eps, tmp, left; ^ /bin/sh ../../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o liblapack.la dbdsdc.lo dgetf2.lo dlamrg.lo dlarnv.lo dlasd0.lo dlasda.lo dlasq6.lo dorgl2.lo dormqr.lo dbdsqr.lo dgetrf.lo dlange.lo dlasd1.lo dtrtri.lo dlasdq.lo dlasr.lo dorglq.lo dormtr.lo dgebd2.lo dlabrd.lo dlanst.lo dlasd2.lo dlasdt.lo dlasrt.lo dorgqr.lo dstebz.lo dgebrd.lo dsytrd.lo dlacpy.lo dlapy2.lo dlasd3.lo dlaset.lo dlassq.lo dorm2l.lo dgetrs.lo dstegr.lo dgelq2.lo dlae2.lo dlasd4.lo dlasq1.lo dtrti2.lo dgetri.lo dlasv2.lo dorm2r.lo dstein.lo dgelqf.lo dlaebz.lo dlarf.lo dlartg.lo dlasd5.lo dlasq2.lo dlaswp.lo dormbr.lo dsterf.lo dgeqr2.lo dlaed6.lo dlarfb.lo dlaruv.lo dlasd6.lo dlasq3.lo dlatrd.lo dorml2.lo dstevr.lo dgeqrf.lo dlagtf.lo dlarfg.lo dlas2.lo dlasd7.lo dlasq4.lo dorg2r.lo dormlq.lo dsytd2.lo dgesdd.lo dlagts.lo dlarft.lo dlascl.lo dlasd8.lo dlasq5.lo dorgbr.lo dormql.lo dlaev2.lo dsteqr.lo dsyevr.lo dlasrt2.lo dlansy.lo dlar1vx.lo dlarrbx.lo dlarrex.lo dlarrfx.lo dlarrvx.lo sbdsdc.lo sgetf2.lo slamrg.lo slarnv.lo slasd0.lo slasda.lo slasq6.lo sorgl2.lo sormqr.lo sbdsqr.lo sgetrf.lo slange.lo slasd1.lo ssytrd.lo slasdq.lo slasr.lo sorglq.lo sormtr.lo sgebd2.lo slabrd.lo slanst.lo slasd2.lo slasdt.lo slasrt.lo sorgqr.lo sstebz.lo sgebrd.lo sgetrs.lo slacpy.lo slapy2.lo slasd3.lo slaset.lo slassq.lo sorm2l.lo sgetri.lo sstegr.lo sgelq2.lo slae2.lo slasd4.lo slasq1.lo strti2.lo strtri.lo slasv2.lo sorm2r.lo sstein.lo sgelqf.lo slaebz.lo slarf.lo slartg.lo slasd5.lo slasq2.lo slaswp.lo sormbr.lo ssterf.lo sgeqr2.lo slaed6.lo slarfb.lo slaruv.lo slasd6.lo slasq3.lo slatrd.lo sorml2.lo sstevr.lo sgeqrf.lo slagtf.lo slarfg.lo slas2.lo slasd7.lo slasq4.lo sorg2r.lo sormlq.lo ssytd2.lo sgesdd.lo slagts.lo slarft.lo slascl.lo slasd8.lo slasq5.lo sorgbr.lo sormql.lo slaev2.lo ssteqr.lo ssyevr.lo slasrt2.lo slansy.lo slar1vx.lo slarrbx.lo slarrex.lo slarrfx.lo slarrvx.lo ilasrt2.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ar cru .libs/liblapack.a .libs/dbdsdc.o .libs/dgetf2.o .libs/dlamrg.o .libs/dlarnv.o .libs/dlasd0.o .libs/dlasda.o .libs/dlasq6.o .libs/dorgl2.o .libs/dormqr.o .libs/dbdsqr.o .libs/dgetrf.o .libs/dlange.o .libs/dlasd1.o .libs/dtrtri.o .libs/dlasdq.o .libs/dlasr.o .libs/dorglq.o .libs/dormtr.o .libs/dgebd2.o .libs/dlabrd.o .libs/dlanst.o .libs/dlasd2.o .libs/dlasdt.o .libs/dlasrt.o .libs/dorgqr.o .libs/dstebz.o .libs/dgebrd.o .libs/dsytrd.o .libs/dlacpy.o .libs/dlapy2.o .libs/dlasd3.o .libs/dlaset.o .libs/dlassq.o .libs/dorm2l.o .libs/dgetrs.o .libs/dstegr.o .libs/dgelq2.o .libs/dlae2.o .libs/dlasd4.o .libs/dlasq1.o .libs/dtrti2.o .libs/dgetri.o .libs/dlasv2.o .libs/dorm2r.o .libs/dstein.o .libs/dgelqf.o .libs/dlaebz.o .libs/dlarf.o .libs/dlartg.o .libs/dlasd5.o .libs/dlasq2.o .libs/dlaswp.o .libs/dormbr.o .libs/dsterf.o .libs/dgeqr2.o .libs/dlaed6.o .libs/dlarfb.o .libs/dlaruv.o .libs/dlasd6.o .libs/dlasq3.o .libs/dlatrd.o .libs/dorml2.o .libs/dstevr.o .libs/dgeqrf.o .libs/dlagtf.o .libs/dlarfg.o .libs/dlas2.o .libs/dlasd7.o .libs/dlasq4.o .libs/dorg2r.o .libs/dormlq.o .libs/dsytd2.o .libs/dgesdd.o .libs/dlagts.o .libs/dlarft.o .libs/dlascl.o .libs/dlasd8.o .libs/dlasq5.o .libs/dorgbr.o .libs/dormql.o .libs/dlaev2.o .libs/dsteqr.o .libs/dsyevr.o .libs/dlasrt2.o .libs/dlansy.o .libs/dlar1vx.o .libs/dlarrbx.o .libs/dlarrex.o .libs/dlarrfx.o .libs/dlarrvx.o .libs/sbdsdc.o .libs/sgetf2.o .libs/slamrg.o .libs/slarnv.o .libs/slasd0.o .libs/slasda.o .libs/slasq6.o .libs/sorgl2.o .libs/sormqr.o .libs/sbdsqr.o .libs/sgetrf.o .libs/slange.o .libs/slasd1.o .libs/ssytrd.o .libs/slasdq.o .libs/slasr.o .libs/sorglq.o .libs/sormtr.o .libs/sgebd2.o .libs/slabrd.o .libs/slanst.o .libs/slasd2.o .libs/slasdt.o .libs/slasrt.o .libs/sorgqr.o .libs/sstebz.o .libs/sgebrd.o .libs/sgetrs.o .libs/slacpy.o .libs/slapy2.o .libs/slasd3.o .libs/slaset.o .libs/slassq.o .libs/sorm2l.o .libs/sgetri.o .libs/sstegr.o .libs/sgelq2.o .libs/slae2.o .libs/slasd4.o .libs/slasq1.o .libs/strti2.o .libs/strtri.o .libs/slasv2.o .libs/sorm2r.o .libs/sstein.o .libs/sgelqf.o .libs/slaebz.o .libs/slarf.o .libs/slartg.o .libs/slasd5.o .libs/slasq2.o .libs/slaswp.o .libs/sormbr.o .libs/ssterf.o .libs/sgeqr2.o .libs/slaed6.o .libs/slarfb.o .libs/slaruv.o .libs/slasd6.o .libs/slasq3.o .libs/slatrd.o .libs/sorml2.o .libs/sstevr.o .libs/sgeqrf.o .libs/slagtf.o .libs/slarfg.o .libs/slas2.o .libs/slasd7.o .libs/slasq4.o .libs/sorg2r.o .libs/sormlq.o .libs/ssytd2.o .libs/sgesdd.o .libs/slagts.o .libs/slarft.o .libs/slascl.o .libs/slasd8.o .libs/slasq5.o .libs/sorgbr.o .libs/sormql.o .libs/slaev2.o .libs/ssteqr.o .libs/ssyevr.o .libs/slasrt2.o .libs/slansy.o .libs/slar1vx.o .libs/slarrbx.o .libs/slarrex.o .libs/slarrfx.o .libs/slarrvx.o .libs/ilasrt2.o ranlib .libs/liblapack.a creating liblapack.la (cd .libs && rm -f liblapack.la && ln -s ../liblapack.la liblapack.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_lapack' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o 3dview.lo ../../../src/gmxlib/3dview.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o atomprop.lo ../../../src/gmxlib/atomprop.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o bondfree.lo ../../../src/gmxlib/bondfree.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcgrid.lo ../../../src/gmxlib/calcgrid.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calch.lo ../../../src/gmxlib/calch.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o checkpoint.lo ../../../src/gmxlib/checkpoint.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o confio.lo ../../../src/gmxlib/confio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o copyrite.lo ../../../src/gmxlib/copyrite.c mkdir .libs mkdir .libs mkdir: cannot create directory '.libs': File exists mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/confio.c -fPIC -DPIC -o .libs/confio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/atomprop.c -fPIC -DPIC -o .libs/atomprop.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/calch.c -fPIC -DPIC -o .libs/calch.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/copyrite.c -fPIC -DPIC -o .libs/copyrite.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/calcgrid.c -fPIC -DPIC -o .libs/calcgrid.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/3dview.c -fPIC -DPIC -o .libs/3dview.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/checkpoint.c -fPIC -DPIC -o .libs/checkpoint.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/bondfree.c -fPIC -DPIC -o .libs/bondfree.o ../../../src/gmxlib/calcgrid.c: In function 'calc_grid': ../../../src/gmxlib/calcgrid.c:89:8: warning: unused variable 'tmp' [-Wunused-variable] real tmp[3]; ^ ../../../src/gmxlib/calcgrid.c:86:10: warning: unused variable 'j' [-Wunused-variable] int i,j,nmin[DIM]; ^ ../../../src/gmxlib/bondfree.c: In function 'FENE_bonds': ../../../src/gmxlib/bondfree.c:220:9: warning: unused variable 'dr' [-Wunused-variable] real dr,dr2,bm2,omdr2obm2,fbond,vbond,fij,vtot; ^ ../../../src/gmxlib/bondfree.c: In function 'do_1_thole': ../../../src/gmxlib/bondfree.c:534:20: warning: unused variable 'r12n' [-Wunused-variable] real r12sq,r12_1,r12n,r12bar,v0,v1,fscal,ebar,fff; ^ ../../../src/gmxlib/bondfree.c: In function 'posres': ../../../src/gmxlib/bondfree.c:1136:19: warning: unused variable 'fc' [-Wunused-variable] real v,vtot,fm,*fc; ^ ../../../src/gmxlib/bondfree.c:1134:22: warning: unused variable 'ki' [-Wunused-variable] int i,ai,m,d,type,ki,npbcdim=0; ^ ../../../src/gmxlib/bondfree.c: In function 'cross_bond_angle': ../../../src/gmxlib/bondfree.c:1687:32: warning: variable 't3' set but not used [-Wunused-but-set-variable] int i,ai,aj,ak,type,m,t1,t2,t3; ^ ../../../src/gmxlib/bondfree.c: In function 'bonded_tab': ../../../src/gmxlib/bondfree.c:1762:10: warning: unused variable 'f' [-Wunused-variable] real v,f,dvdl; ^ ../../../src/gmxlib/bondfree.c:1762:8: warning: unused variable 'v' [-Wunused-variable] real v,f,dvdl; ^ ../../../src/gmxlib/bondfree.c: In function 'tab_angles': ../../../src/gmxlib/bondfree.c:1887:12: warning: unused variable 'snt' [-Wunused-variable] real snt,st,sth; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/bondfree.c:42: ../../../src/gmxlib/bondfree.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/bondfree.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/bondfree.c:56:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/gmxlib/copyrite.c: In function 'cool_quote': ../../../src/gmxlib/copyrite.c:181:9: warning: unused variable 's' [-Wunused-variable] char *s,*ptr; ^ ../../../src/gmxlib/copyrite.c: In function 'please_cite': ../../../src/gmxlib/copyrite.c:469:8: warning: unused variable 'j' [-Wunused-variable] int j,index; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/copyrite.c:53: ../../../src/gmxlib/copyrite.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/3dview.c: In function 'reset_view': ../../../src/gmxlib/3dview.c:282:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/3dview.c:47: ../../../src/gmxlib/3dview.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/3dview.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o disre.lo ../../../src/gmxlib/disre.c ../../../src/gmxlib/calch.c: In function 'gen_waterhydrogen': ../../../src/gmxlib/calch.c:81:14: warning: unused variable 'kkk' [-Wunused-variable] rvec kkk; ^ In file included from ../../../src/gmxlib/calch.c:42:0: ../../../src/gmxlib/calch.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/calch.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/atomprop.c:45:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/atomprop.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/confio.c: In function 'read_espresso_conf': ../../../src/gmxlib/confio.c:448:21: warning: unused variable 'npar' [-Wunused-variable] int natoms,level,npar,r,nprop,p,i,m; ^ ../../../src/gmxlib/confio.c:448:8: warning: unused variable 'natoms' [-Wunused-variable] int natoms,level,npar,r,nprop,p,i,m; ^ ../../../src/gmxlib/confio.c: In function 'read_stx_conf': ../../../src/gmxlib/confio.c:1298:14: warning: unused variable 'd' [-Wunused-variable] real d,r1,r2; ^ ../../../src/gmxlib/confio.c:1293:14: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/confio.c:49: ../../../src/gmxlib/confio.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/confio.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/confio.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/gmxlib/confio.c:57:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/confio.c:59: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/confio.c:864:13: warning: 'get_conf' defined but not used [-Wunused-function] static void get_conf(FILE *in, char *title, int *natoms, ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpte_ints': ../../../src/gmxlib/checkpoint.c:305:16: warning: unused variable 'i' [-Wunused-variable] int nf,dt,i; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpte_doubles': ../../../src/gmxlib/checkpoint.c:371:16: warning: unused variable 'i' [-Wunused-variable] int nf,dt,i; ^ ../../../src/gmxlib/checkpoint.c: In function 'do_cpt_header': ../../../src/gmxlib/checkpoint.c:534:10: warning: unused variable 'i' [-Wunused-variable] int i; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/disre.c -fPIC -DPIC -o .libs/disre.o ../../../src/gmxlib/checkpoint.c: In function 'write_checkpoint': ../../../src/gmxlib/checkpoint.c:837:30: warning: unused variable 'i' [-Wunused-variable] int flags_eks,flags_enh,i; ^ ../../../src/gmxlib/checkpoint.c:833:29: warning: unused variable 'flag_64bit' [-Wunused-variable] int nppnodes,npmenodes,flag_64bit; ^ ../../../src/gmxlib/checkpoint.c: In function 'read_checkpoint': ../../../src/gmxlib/checkpoint.c:1254:40: warning: left-hand operand of comma expression has no effect [-Wunused-value] if (outputfiles[i].filename,outputfiles[i].offset < 0) ^ ../../../src/gmxlib/checkpoint.c:1036:7: warning: unused variable 'filename' [-Wunused-variable] char filename[STRLEN]; ^ ../../../src/gmxlib/checkpoint.c:1033:15: warning: unused variable 'j' [-Wunused-variable] int fp,i,j; ^ ../../../src/gmxlib/checkpoint.c: In function 'list_checkpoint': ../../../src/gmxlib/checkpoint.c:1421:12: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/checkpoint.c:1421:10: warning: unused variable 'i' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/checkpoint.c:1420:10: warning: unused variable 'indent' [-Wunused-variable] int indent; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/checkpoint.c:32: ../../../src/gmxlib/checkpoint.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/checkpoint.c:34: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/checkpoint.c:34:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_fit.lo ../../../src/gmxlib/do_fit.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o enxio.lo ../../../src/gmxlib/enxio.c ../../../src/gmxlib/disre.c: In function 'init_disres': ../../../src/gmxlib/disre.c:62:19: warning: variable 'ip' set but not used [-Wunused-but-set-variable] t_iparams *ip; ^ ../../../src/gmxlib/disre.c:61:26: warning: unused variable 'i' [-Wunused-variable] int fa,nmol,i,npair,np; ^ ../../../src/gmxlib/disre.c: In function 'calc_disres_R_6': ../../../src/gmxlib/disre.c:217:23: warning: unused variable 'dt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:217:20: warning: unused variable 'jt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:217:17: warning: unused variable 'it' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:212:37: warning: unused variable 'm' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:34: warning: unused variable 'kj' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:31: warning: unused variable 'ki' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c:212:24: warning: unused variable 'i' [-Wunused-variable] int fa,res,i,pair,ki,kj,m; ^ ../../../src/gmxlib/disre.c: In function 'ta_disres': ../../../src/gmxlib/disre.c:338:20: warning: unused variable 'jt' [-Wunused-variable] ivec it,jt,dt; ^ ../../../src/gmxlib/disre.c:338:17: warning: unused variable 'it' [-Wunused-variable] ivec it,jt,dt; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/disre.c:47: ../../../src/gmxlib/disre.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/disre.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/disre.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ewald_util.lo ../../../src/gmxlib/ewald_util.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fatal.lo ../../../src/gmxlib/gmx_fatal.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/do_fit.c -fPIC -DPIC -o .libs/do_fit.o ../../../src/gmxlib/do_fit.c: In function 'calc_fit_R': ../../../src/gmxlib/do_fit.c:103:18: warning: unused variable 'm' [-Wunused-variable] int c,r,n,j,m,i,irot,s; ^ ../../../src/gmxlib/do_fit.c: In function 'do_fit_ndim': ../../../src/gmxlib/do_fit.c:214:10: warning: unused variable 'i' [-Wunused-variable] int i,j,m,r,c; ^ In file included from ../../../src/gmxlib/do_fit.c:40:0: ../../../src/gmxlib/do_fit.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/do_fit.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ewald_util.c -fPIC -DPIC -o .libs/ewald_util.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_fatal.c -fPIC -DPIC -o .libs/gmx_fatal.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/enxio.c -fPIC -DPIC -o .libs/enxio.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/ewald_util.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/ewald_util.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ffscanf.lo ../../../src/gmxlib/ffscanf.c ../../../src/gmxlib/enxio.c: In function 'empty_file': ../../../src/gmxlib/enxio.c:220:8: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret; ^ ../../../src/gmxlib/enxio.c: In function 'get_enx_state': ../../../src/gmxlib/enxio.c:443:16: warning: unused variable 'pcouplmu_nm' [-Wunused-variable] static char *pcouplmu_nm[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/enxio.c:46: ../../../src/gmxlib/enxio.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/enxio.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o filenm.lo ../../../src/gmxlib/filenm.c In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/gmx_fatal.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/gmx_fatal.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/gmxlib/gmx_fatal.c:115:13: warning: 'bputi' defined but not used [-Wunused-function] static void bputi(char *msg,int *len,int val,int radix,int fld,bool bNeg) ^ ../../../src/gmxlib/gmx_fatal.c:226:13: warning: 'fatal_error' defined but not used [-Wunused-function] static void fatal_error(int f_errno,const char *fmt,...) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ffscanf.c -fPIC -DPIC -o .libs/ffscanf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/filenm.c -fPIC -DPIC -o .libs/filenm.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o futil.lo ../../../src/gmxlib/futil.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gbutil.lo ../../../src/gmxlib/gbutil.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxfio.lo ../../../src/gmxlib/gmxfio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gbutil.c -fPIC -DPIC -o .libs/gbutil.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ifunc.lo ../../../src/gmxlib/ifunc.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/futil.c -fPIC -DPIC -o .libs/futil.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/gbutil.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/gbutil.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/gbutil.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/futil.c: In function 'ffopen': ../../../src/gmxlib/futil.c:287:18: warning: unused variable 'bf' [-Wunused-variable] char buf[256],*bf,*bufsize=0,*ptr; ^ ../../../src/gmxlib/filenm.c: In function 'add_suffix_to_output_names': ../../../src/gmxlib/futil.c: In function 'get_libdir': ../../../src/gmxlib/futil.c:397:22: warning: variable 'pdum' set but not used [-Wunused-but-set-variable] char *dir,*ptr,*s,*pdum; ^ ../../../src/gmxlib/futil.c:395:8: warning: unused variable 'test_file' [-Wunused-variable] char test_file[MAX_PATHBUF]; ^ ../../../src/gmxlib/filenm.c:811:12: warning: unused variable 'pos' [-Wunused-variable] int i,j,pos; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/futil.c:53: ../../../src/gmxlib/futil.c: At top level: In file included from ../../../include/wman.h:44:0, from ../../../src/gmxlib/filenm.c:48: ../../../src/gmxlib/filenm.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/ifunc.c -fPIC -DPIC -o .libs/ifunc.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmxfio.c -fPIC -DPIC -o .libs/gmxfio.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o index.lo ../../../src/gmxlib/index.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o cinvsqrtdata.lo ../../../src/gmxlib/cinvsqrtdata.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o invblock.lo ../../../src/gmxlib/invblock.c ../../../src/gmxlib/gmxfio.c: In function 'gmx_fio_fopen': ../../../src/gmxlib/gmxfio.c:803:8: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/gmxlib/gmxfio.c: In function 'gmx_fio_get_output_file_positions': ../../../src/gmxlib/gmxfio.c:885:27: warning: unused variable 'pos' [-Wunused-variable] long pos; ^ ../../../src/gmxlib/gmxfio.c:884:34: warning: unused variable 'pos_lo' [-Wunused-variable] int pos_hi,pos_lo; ^ ../../../src/gmxlib/gmxfio.c:884:27: warning: unused variable 'pos_hi' [-Wunused-variable] int pos_hi,pos_lo; ^ ../../../src/gmxlib/gmxfio.c:883:36: warning: unused variable 'rc' [-Wunused-variable] int i,nfiles,rc,nalloc; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o macros.lo ../../../src/gmxlib/macros.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o orires.lo ../../../src/gmxlib/orires.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/invblock.c -fPIC -DPIC -o .libs/invblock.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/index.c -fPIC -DPIC -o .libs/index.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/macros.c -fPIC -DPIC -o .libs/macros.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sparsematrix.lo ../../../src/gmxlib/sparsematrix.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/orires.c -fPIC -DPIC -o .libs/orires.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/cinvsqrtdata.c -fPIC -DPIC -o .libs/cinvsqrtdata.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o main.lo ../../../src/gmxlib/main.c ../../../src/gmxlib/index.c: In function 'analyse_prot': ../../../src/gmxlib/index.c:298:15: warning: unused variable 'nnpres' [-Wunused-variable] int nra,nnpres,npres; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o maths.lo ../../../src/gmxlib/maths.c ../../../src/gmxlib/index.c: In function 'init_index': ../../../src/gmxlib/index.c:532:19: warning: variable 'nread' set but not used [-Wunused-but-set-variable] int i,j,ng,nread; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/index.c:48: ../../../src/gmxlib/index.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/index.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/sparsematrix.c -fPIC -DPIC -o .libs/sparsematrix.o ../../../src/gmxlib/orires.c: In function 'init_orires': ../../../src/gmxlib/orires.c:59:26: warning: unused variable 'nr' [-Wunused-variable] int i,j,d,ex,nmol,nr,*nr_ex; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/orires.c:43: ../../../src/gmxlib/orires.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/orires.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/orires.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/maths.c -fPIC -DPIC -o .libs/maths.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/main.c -fPIC -DPIC -o .libs/main.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o matio.lo ../../../src/gmxlib/matio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mshift.lo ../../../src/gmxlib/mshift.c ../../../src/gmxlib/maths.c: In function 'gmx_erfc': ../../../src/gmxlib/maths.c:291:31: warning: unused variable 'z4' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:28: warning: unused variable 'z2' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:25: warning: unused variable 's3' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:22: warning: unused variable 's2' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:19: warning: unused variable 's1' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:16: warning: unused variable 'r2' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ ../../../src/gmxlib/maths.c:291:13: warning: unused variable 'r1' [-Wunused-variable] double r1,r2,s1,s2,s3,z2,z4; ^ In file included from ../../../src/gmxlib/maths.c:43:0: ../../../src/gmxlib/maths.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ ../../../src/gmxlib/main.c: In function 'par_fn': ../../../src/gmxlib/main.c:68:7: warning: unused variable 'n' [-Wunused-variable] int n; ^ ../../../src/gmxlib/main.c: In function 'gmx_log_open': ../../../src/gmxlib/main.c:124:12: warning: unused variable 'testlen' [-Wunused-variable] int len,testlen,pid; ^ ../../../src/gmxlib/main.c: In function 'init_par': ../../../src/gmxlib/main.c:309:13: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/gmxlib/main.c:52: ../../../src/gmxlib/main.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/gmxlib/main.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/gmxlib/main.c:52: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/matio.c -fPIC -DPIC -o .libs/matio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mshift.c -fPIC -DPIC -o .libs/mshift.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mtop_util.lo ../../../src/gmxlib/mtop_util.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mtxio.lo ../../../src/gmxlib/mtxio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mvdata.lo ../../../src/gmxlib/mvdata.c ../../../src/gmxlib/mshift.c: In function 'compact_graph': ../../../src/gmxlib/mshift.c:243:12: warning: unused variable 'e' [-Wunused-variable] atom_id *e; ^ ../../../src/gmxlib/mshift.c:242:9: warning: unused variable 'j' [-Wunused-variable] int i,j,n,max_nedge; ^ ../../../src/gmxlib/mshift.c: In function 'mk_graph_ilist': ../../../src/gmxlib/mshift.c:307:13: warning: variable 'nbtot' set but not used [-Wunused-but-set-variable] int i,nbtot; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o names.lo ../../../src/gmxlib/names.c In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/mshift.c:44: ../../../src/gmxlib/mshift.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/mshift.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/mshift.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mtxio.c -fPIC -DPIC -o .libs/mtxio.o ../../../src/gmxlib/matio.c: In function 'write_xpm_map_split': ../../../src/gmxlib/matio.c:636:16: warning: unused variable 'fac' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:14: warning: unused variable 'b' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:12: warning: unused variable 'g' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:636:10: warning: unused variable 'r' [-Wunused-variable] real r,g,b,fac; ^ ../../../src/gmxlib/matio.c:635:10: warning: unused variable 'i' [-Wunused-variable] int i,ntot; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/matio.c:48: ../../../src/gmxlib/matio.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/matio.c:50:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mtop_util.c -fPIC -DPIC -o .libs/mtop_util.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/mvdata.c -fPIC -DPIC -o .libs/mvdata.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/names.c -fPIC -DPIC -o .libs/names.o ../../../src/gmxlib/mtxio.c: In function 'gmx_mtxio_write': ../../../src/gmxlib/mtxio.c:90:13: warning: variable 'xd' set but not used [-Wunused-but-set-variable] XDR * xd; ^ ../../../src/gmxlib/mtxio.c: In function 'gmx_mtxio_read': ../../../src/gmxlib/mtxio.c:164:13: warning: variable 'xd' set but not used [-Wunused-but-set-variable] XDR * xd; ^ In file included from ../../../src/gmxlib/mtxio.c:48:0: ../../../src/gmxlib/mtxio.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o network.lo ../../../src/gmxlib/network.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrama.lo ../../../src/gmxlib/nrama.c ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_atomnr_to_molblock_ind': ../../../src/gmxlib/mtop_util.c:105:14: warning: unused variable 'atoms' [-Wunused-variable] t_atoms *atoms; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_atominfo_global': ../../../src/gmxlib/mtop_util.c:132:21: warning: unused variable 'molb' [-Wunused-variable] gmx_molblock_t *molb; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_ilistloop_all_next': ../../../src/gmxlib/mtop_util.c:384:21: warning: unused variable 'molb' [-Wunused-variable] gmx_molblock_t *molb; ^ ../../../src/gmxlib/mtop_util.c: In function 'gmx_mtop_global_cgs': ../../../src/gmxlib/mtop_util.c:438:14: warning: unused variable 'atoms' [-Wunused-variable] t_atoms *atoms; ^ ../../../src/gmxlib/mtop_util.c: In function 'gen_local_top': ../../../src/gmxlib/mtop_util.c:669:31: warning: unused variable 'mt' [-Wunused-variable] int mb,srcnr,destnr,ftype,mt,natoms,nposre_old; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrjac.lo ../../../src/gmxlib/nrjac.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/network.c -fPIC -DPIC -o .libs/network.o ../../../src/gmxlib/mvdata.c: In function 'bc_atoms': ../../../src/gmxlib/mvdata.c:147:7: warning: unused variable 'dummy' [-Wunused-variable] int dummy; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_groups': ../../../src/gmxlib/mvdata.c:162:7: warning: unused variable 'dummy' [-Wunused-variable] int dummy; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrama.c -fPIC -DPIC -o .libs/nrama.o ../../../src/gmxlib/network.c: In function 'gmx_setup': ../../../src/gmxlib/network.c:75:12: warning: unused variable 'flag' [-Wunused-variable] int i,flag; ^ ../../../src/gmxlib/network.c:75:10: warning: unused variable 'i' [-Wunused-variable] int i,flag; ^ ../../../src/gmxlib/network.c:73:10: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ ../../../src/gmxlib/mvdata.c: In function 'bc_ffparams': ../../../src/gmxlib/mvdata.c:290:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../src/gmxlib/network.c:45:0: ../../../src/gmxlib/network.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/network.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/mvdata.c: In function 'bc_molblock': ../../../src/gmxlib/mvdata.c:427:8: warning: unused variable 'bAlloc' [-Wunused-variable] bool bAlloc=TRUE; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/mvdata.c:50: ../../../src/gmxlib/mvdata.c: At top level: /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nrnb.lo ../../../src/gmxlib/nrnb.c ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/mvdata.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/mvdata.c:275:13: warning: 'bc_idef' defined but not used [-Wunused-function] static void bc_idef(const t_commrec *cr,t_idef *idef) ^ ../../../src/gmxlib/nrama.c: In function 'get_dih2': ../../../src/gmxlib/nrama.c:179:11: warning: unused variable 'found' [-Wunused-variable] int found,**ff,thisff[NPP]; ^ ../../../src/gmxlib/nrama.c: In function 'init_rama': ../../../src/gmxlib/nrama.c:307:10: warning: unused variable 'ePBC' [-Wunused-variable] int ePBC; ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/nrama.h:45, from ../../../src/gmxlib/nrama.c:49: ../../../src/gmxlib/nrama.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/nrama.c:176:13: warning: 'get_dih2' defined but not used [-Wunused-function] static void get_dih2(t_xrama *xr,t_functype functype[], ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrjac.c -fPIC -DPIC -o .libs/nrjac.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/nrjac.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pargs.lo ../../../src/gmxlib/pargs.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/nrnb.c -fPIC -DPIC -o .libs/nrnb.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pbc.lo ../../../src/gmxlib/pbc.c In file included from ../../../src/gmxlib/nrnb.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdbio.lo ../../../src/gmxlib/pdbio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pargs.c -fPIC -DPIC -o .libs/pargs.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pbc.c -fPIC -DPIC -o .libs/pbc.o ../../../src/gmxlib/pbc.c: In function 'low_set_pbc': ../../../src/gmxlib/pbc.c:272:8: warning: unused variable 'bXY' [-Wunused-variable] bool bXY,bUse; ^ ../../../src/gmxlib/pbc.c: In function 'put_atom_in_box': ../../../src/gmxlib/pbc.c:1300:7: warning: unused variable 'i' [-Wunused-variable] int i,m,d; ^ ../../../src/gmxlib/pbc.c: In function 'put_atoms_in_box': ../../../src/gmxlib/pbc.c:1314:11: warning: unused variable 'd' [-Wunused-variable] int i,m,d; ^ ../../../src/gmxlib/pbc.c:1314:9: warning: unused variable 'm' [-Wunused-variable] int i,m,d; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pbc.c:43: ../../../src/gmxlib/pbc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pbc.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o princ.lo ../../../src/gmxlib/princ.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rando.lo ../../../src/gmxlib/rando.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o random.lo ../../../src/gmxlib/random.c ../../../src/gmxlib/pargs.c: In function 'print_pargs': ../../../src/gmxlib/pargs.c:306:26: warning: unused variable 'tmp' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ ../../../src/gmxlib/pargs.c:306:16: warning: unused variable 'buf2' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ ../../../src/gmxlib/pargs.c:306:8: warning: unused variable 'buf' [-Wunused-variable] char buf[32],buf2[256],tmp[256]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pargs.c:51: ../../../src/gmxlib/pargs.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pargs.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/pdbio.c -fPIC -DPIC -o .libs/pdbio.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_random.lo ../../../src/gmxlib/gmx_random.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/princ.c -fPIC -DPIC -o .libs/princ.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/pdbio.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/pdbio.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/pdbio.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rando.c -fPIC -DPIC -o .libs/rando.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/random.c -fPIC -DPIC -o .libs/random.o ../../../src/gmxlib/random.c: In function 'maxwell_speed': ../../../src/gmxlib/random.c:94:11: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/random.c:93:12: warning: unused variable 'dummy' [-Wunused-variable] atom_id *dummy; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/random.c:45: ../../../src/gmxlib/random.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/random.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_random.c -fPIC -DPIC -o .libs/gmx_random.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rbin.lo ../../../src/gmxlib/rbin.c In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/princ.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/princ.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/princ.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/princ.c:48:13: warning: 'm_op' defined but not used [-Wunused-function] static void m_op(matrix mat,rvec x) ^ ../../../src/gmxlib/princ.c:249:13: warning: 'dump_shit' defined but not used [-Wunused-function] static void dump_shit(FILE *out,matrix trans,rvec prcomp,real totmass) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readinp.lo ../../../src/gmxlib/readinp.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o replace.lo ../../../src/gmxlib/replace.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rmpbc.lo ../../../src/gmxlib/rmpbc.c ../../../src/gmxlib/gmx_random.c: In function 'gmx_rng_make_seed': ../../../src/gmxlib/gmx_random.c:146:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret; ^ ../../../src/gmxlib/gmx_random.c: In function 'gmx_rng_update': ../../../src/gmxlib/gmx_random.c:168:7: warning: variable 'mti' set but not used [-Wunused-but-set-variable] int mti,k; ^ ../../../src/gmxlib/gmx_random.c:167:16: warning: unused variable 'lastx' [-Wunused-variable] unsigned int lastx,x1,x2,y,*mt; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rbin.c -fPIC -DPIC -o .libs/rbin.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/readinp.c -fPIC -DPIC -o .libs/readinp.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shift_util.lo ../../../src/gmxlib/shift_util.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sortwater.lo ../../../src/gmxlib/sortwater.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/replace.c -fPIC -DPIC -o .libs/replace.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/rmpbc.c -fPIC -DPIC -o .libs/rmpbc.o In file included from ../../../src/gmxlib/readinp.c:46:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o smalloc.lo ../../../src/gmxlib/smalloc.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o statutil.lo ../../../src/gmxlib/statutil.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/shift_util.c -fPIC -DPIC -o .libs/shift_util.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/rmpbc.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/rmpbc.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/rmpbc.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o strdb.lo ../../../src/gmxlib/strdb.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o string2.lo ../../../src/gmxlib/string2.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/sortwater.c -fPIC -DPIC -o .libs/sortwater.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/smalloc.c -fPIC -DPIC -o .libs/smalloc.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/statutil.c -fPIC -DPIC -o .libs/statutil.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o symtab.lo ../../../src/gmxlib/symtab.c In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/sortwater.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/sortwater.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/strdb.c -fPIC -DPIC -o .libs/strdb.o ../../../src/gmxlib/statutil.c: In function 'check_times2': ../../../src/gmxlib/statutil.c:152:8: warning: variable 'margin' set but not used [-Wunused-but-set-variable] real margin; ^ ../../../src/gmxlib/statutil.c: In function 'parse_common_args': ../../../src/gmxlib/statutil.c:528:14: warning: unused variable 'newdesc' [-Wunused-variable] char *ptr,*newdesc; ^ ../../../src/gmxlib/statutil.c:528:9: warning: unused variable 'ptr' [-Wunused-variable] char *ptr,*newdesc; ^ ../../../src/gmxlib/statutil.c:491:11: warning: unused variable 'npri_pa' [-Wunused-variable] t_pargs npri_pa = { "-npri", FALSE, etINT, {&npri}, ^ ../../../src/gmxlib/statutil.c:485:27: warning: unused variable 'mantp' [-Wunused-variable] static int nicelevel=0,mantp=0,npri=0,debug_level=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/statutil.c:47: ../../../src/gmxlib/statutil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/statutil.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/statutil.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/statutil.c:73:14: warning: 'timelabel' defined but not used [-Wunused-variable] static char *timelabel = NULL; ^ ../../../src/gmxlib/statutil.c:361:13: warning: 'pdesc' defined but not used [-Wunused-function] static void pdesc(char *desc) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topsort.lo ../../../src/gmxlib/topsort.c ../../../src/gmxlib/shift_util.c: In function 'shift_LRcorrection': ../../../src/gmxlib/shift_util.c:257:10: warning: unused variable 'shift' [-Wunused-variable] ivec shift; ^ ../../../src/gmxlib/shift_util.c:253:42: warning: unused variable 'qtot' [-Wunused-variable] real qi,dr,dr2,dr_1,dr_3,fscal,Vexcl,qtot=0; ^ ../../../src/gmxlib/shift_util.c:252:10: warning: unused variable 'isp' [-Wunused-variable] double isp=0.564189583547756; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/shift_util.c:43: ../../../src/gmxlib/shift_util.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/shift_util.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/shift_util.c:370:13: warning: 'rgbset' defined but not used [-Wunused-function] static real rgbset(real col) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/symtab.c -fPIC -DPIC -o .libs/symtab.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/string2.c -fPIC -DPIC -o .libs/string2.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpxio.lo ../../../src/gmxlib/tpxio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trnio.lo ../../../src/gmxlib/trnio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/topsort.c -fPIC -DPIC -o .libs/topsort.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/trnio.c -fPIC -DPIC -o .libs/trnio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/tpxio.c -fPIC -DPIC -o .libs/tpxio.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trxio.lo ../../../src/gmxlib/trxio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o txtdump.lo ../../../src/gmxlib/txtdump.c ../../../src/gmxlib/tpxio.c: In function 'do_ilist': ../../../src/gmxlib/tpxio.c:987:10: warning: unused variable 'k' [-Wunused-variable] int i,k,idum; ^ ../../../src/gmxlib/tpxio.c: In function 'do_ffparams': ../../../src/gmxlib/tpxio.c:1008:15: warning: unused variable 'j' [-Wunused-variable] int idum,i,j,k; ^ ../../../src/gmxlib/tpxio.c: In function 'do_ilists': ../../../src/gmxlib/tpxio.c:1061:8: warning: unused variable 'bDum' [-Wunused-variable] bool bDum=TRUE,bClear; ^ ../../../src/gmxlib/tpxio.c:1060:13: warning: unused variable 'renum' [-Wunused-variable] int i,j,k,renum[F_NRE]; ^ ../../../src/gmxlib/tpxio.c:1060:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k,renum[F_NRE]; ^ ../../../src/gmxlib/tpxio.c: In function 'do_groups': ../../../src/gmxlib/tpxio.c:1276:10: warning: unused variable 'n' [-Wunused-variable] int g,n,i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_moltype': ../../../src/gmxlib/tpxio.c:1393:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_molblock': ../../../src/gmxlib/tpxio.c:1420:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/tpxio.c: In function 'do_mtop': ../../../src/gmxlib/tpxio.c:1547:14: warning: unused variable 'i' [-Wunused-variable] int mt,mb,i; ^ ../../../src/gmxlib/tpxio.c: In function 'read_tpx_top': ../../../src/gmxlib/tpxio.c:2005:15: warning: unused variable 'ltop' [-Wunused-variable] t_topology *ltop; ^ ../../../src/gmxlib/tpxio.c: In function 'read_tps_conf': ../../../src/gmxlib/tpxio.c:2035:17: warning: unused variable 'topconv' [-Wunused-variable] t_topology *topconv; ^ In file included from ../../../src/gmxlib/tpxio.c:60:0: ../../../src/gmxlib/tpxio.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/tpxio.c:61: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/tpxio.c:61:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o typedefs.lo ../../../src/gmxlib/typedefs.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o viewit.lo ../../../src/gmxlib/viewit.c ../../../src/gmxlib/topsort.c: In function 'gmx_sort_ilist_fe': ../../../src/gmxlib/topsort.c:142:10: warning: unused variable 'bPert' [-Wunused-variable] bool bPert; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/trxio.c -fPIC -DPIC -o .libs/trxio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/txtdump.c -fPIC -DPIC -o .libs/txtdump.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/viewit.c -fPIC -DPIC -o .libs/viewit.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wgms.lo ../../../src/gmxlib/wgms.c In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/viewit.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/typedefs.c -fPIC -DPIC -o .libs/typedefs.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wman.lo ../../../src/gmxlib/wman.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/wgms.c -fPIC -DPIC -o .libs/wgms.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o writeps.lo ../../../src/gmxlib/writeps.c ../../../src/gmxlib/txtdump.c: In function 'pr_qm_opts': ../../../src/gmxlib/txtdump.c:339:11: warning: unused variable 'j' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c:339:9: warning: unused variable 'm' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c:339:7: warning: unused variable 'i' [-Wunused-variable] int i,m,j; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_ffparams': ../../../src/gmxlib/txtdump.c:906:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_block_title': ../../../src/gmxlib/txtdump.c:950:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_blocka_title': ../../../src/gmxlib/txtdump.c:963:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_block': ../../../src/gmxlib/txtdump.c:1016:9: warning: unused variable 'j' [-Wunused-variable] int i,j,ok,size,start,end; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_atom': ../../../src/gmxlib/txtdump.c:1120:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/gmxlib/txtdump.c: In function 'pr_groups': ../../../src/gmxlib/txtdump.c:1151:9: warning: unused variable 'grpnr' [-Wunused-variable] int grpnr[egcNR]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/txtdump.c:51: ../../../src/gmxlib/txtdump.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/txtdump.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/txtdump.c:976:13: warning: 'low_pr_block' defined but not used [-Wunused-function] static void low_pr_block(FILE *fp,int indent,const char *title,t_block *block, bool bShowNumbers) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/gmxlib/wgms.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/writeps.c -fPIC -DPIC -o .libs/writeps.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/wman.c -fPIC -DPIC -o .libs/wman.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdrd.lo ../../../src/gmxlib/xdrd.c In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/trxio.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/trxio.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/trxio.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/trxio.c:53:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xdrd.c -fPIC -DPIC -o .libs/xdrd.o ../../../src/gmxlib/typedefs.c: In function 'init_block': ../../../src/gmxlib/typedefs.c:64:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_blocka': ../../../src/gmxlib/typedefs.c:74:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_atom': ../../../src/gmxlib/typedefs.c:87:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'init_top': ../../../src/gmxlib/typedefs.c:135:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/typedefs.c: In function 'done_top': ../../../src/gmxlib/typedefs.c:284:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/gmxlib/wman.c: In function 'mydate': ../../../src/gmxlib/typedefs.c: In function 'init_state': ../../../src/gmxlib/typedefs.c:386:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/typedefs.c:43: ../../../src/gmxlib/typedefs.c: At top level: ../../../src/gmxlib/wman.c:168:15: warning: unused variable 'num' [-Wunused-variable] const char *num[] = { "01", "02", "03", "04", "05", "06","07", "08", "09" }; ^ ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/typedefs.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/gmxlib/wman.c: In function 'print_tty_formatted': ../../../src/gmxlib/wman.c:510:16: warning: unused variable 'j' [-Wunused-variable] int buflen,i,j; ^ ../../../src/gmxlib/wman.c: In function 'write_wikiman': ../../../src/gmxlib/wman.c:631:14: warning: unused variable 'tmp2' [-Wunused-variable] char *tmp,*tmp2; ^ ../../../src/gmxlib/wman.c:630:17: warning: unused variable 'link' [-Wunused-variable] char buf[256],link[10]; ^ ../../../src/gmxlib/wman.c: In function 'write_htmlman': ../../../src/gmxlib/wman.c:682:8: warning: unused variable 'link' [-Wunused-variable] char link[10],tmp[255]; ^ ../../../src/gmxlib/wman.c: In function 'write_py': ../../../src/gmxlib/wman.c:925:8: warning: unused variable 'bHidden' [-Wunused-variable] bool bHidden; ^ In file included from ../../../src/gmxlib/wman.c:48:0: ../../../src/gmxlib/wman.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xtcio.lo ../../../src/gmxlib/xtcio.c In file included from ../../../src/gmxlib/writeps.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xvgr.lo ../../../src/gmxlib/xvgr.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xtcio.c -fPIC -DPIC -o .libs/xtcio.o In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/xtcio.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/xtcio.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/xvgr.c -fPIC -DPIC -o .libs/xvgr.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o libxdrf.lo ../../../src/gmxlib/libxdrf.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_arpack.lo ../../../src/gmxlib/gmx_arpack.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dihres.lo ../../../src/gmxlib/dihres.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tcontrol.lo ../../../src/gmxlib/tcontrol.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/libxdrf.c -fPIC -DPIC -o .libs/libxdrf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/dihres.c -fPIC -DPIC -o .libs/dihres.o ../../../src/gmxlib/xvgr.c: In function 'use_xmgr': ../../../src/gmxlib/xvgr.c:56:8: warning: unused variable 'bXMGR' [-Wunused-variable] bool bXMGR; ^ ../../../src/gmxlib/xvgr.c: In function 'read_xvg_time': ../../../src/gmxlib/xvgr.c:402:14: warning: unused variable 'tend' [-Wunused-variable] double dbl,tend=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/xvgr.c:45: ../../../src/gmxlib/xvgr.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/gmxlib/xvgr.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/xvgr.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/xvgr.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_arpack.c -fPIC -DPIC -o .libs/gmx_arpack.o In file included from ../../../include/xdrf.h:41:0, from ../../../src/gmxlib/libxdrf.c:46: ../../../src/gmxlib/libxdrf.c:145:10: warning: return type defaults to 'int' [-Wimplicit-int] F77_FUNC(xdrfshort,XDRFSHORT)(int *xdrid, short *sp, int *ret) ^ ../../src/config.h:28:29: note: in definition of macro 'F77_FUNC' #define F77_FUNC(name,NAME) name ## _ ^ ../../../src/gmxlib/libxdrf.c: In function 'xdr3dfcoord': ../../../src/gmxlib/libxdrf.c:705:9: warning: unused variable 'rc' [-Wunused-variable] int rc; ^ ../../../src/gmxlib/libxdrf.c: In function 'xtc_get_next_frame_start': ../../../src/gmxlib/libxdrf.c:1374:9: warning: unused variable 'inp' [-Wunused-variable] int inp; ^ ../../../src/gmxlib/libxdrf.c: In function 'xdr_xtc_seek_time': ../../../src/gmxlib/libxdrf.c:1522:9: warning: unused variable 'res' [-Wunused-variable] int res; ^ ../../../src/gmxlib/libxdrf.c: In function 'xtc_get_last_frame_number': ../../../src/gmxlib/libxdrf.c:1691:9: warning: unused variable 'res' [-Wunused-variable] int res; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/libxdrf.c:45: ../../../src/gmxlib/libxdrf.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/libxdrf.c: In function 'xdrfshort_': ../../../src/gmxlib/libxdrf.c:149:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ ../../../src/gmxlib/dihres.c: In function 'ta_dihres': ../../../src/gmxlib/dihres.c:77:30: warning: unused variable 'dp2' [-Wunused-variable] real phi0,phi,ddphi,ddp,dp,dp2,dphi,kfac,cos_phi,sign,d2r,fc; ^ ../../../src/gmxlib/dihres.c:76:29: warning: unused variable 'typep' [-Wunused-variable] int ai,aj,ak,al,i,k,type,typep,label,power,t1,t2,t3; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/gmxlib/dihres.c:46: ../../../src/gmxlib/dihres.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/gmxlib/dihres.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/gmxlib/dihres.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/tcontrol.c -fPIC -DPIC -o .libs/tcontrol.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o splitter.lo ../../../src/gmxlib/splitter.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_cyclecounter.lo ../../../src/gmxlib/gmx_cyclecounter.c In file included from ../../../include/statutil.h:51:0, from ../../../src/gmxlib/tcontrol.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/gmxlib/tcontrol.c:61:22: warning: 'timeconvert' defined but not used [-Wunused-variable] static t_timeconvert timeconvert[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/gmx_cyclecounter.c -fPIC -DPIC -o .libs/gmx_cyclecounter.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/gmxlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/gmxlib/splitter.c -fPIC -DPIC -o .libs/splitter.o ../../../src/gmxlib/splitter.c: In function 'split_force2': ../../../src/gmxlib/splitter.c:112:17: warning: variable 'type' set but not used [-Wunused-but-set-variable] int i,j,k,type,nodeid,nratoms,tnr; ^ ../../../src/gmxlib/splitter.c:112:13: warning: unused variable 'j' [-Wunused-variable] int i,j,k,type,nodeid,nratoms,tnr; ^ ../../../src/gmxlib/splitter.c: In function 'mk_border': ../../../src/gmxlib/splitter.c:244:14: warning: unused variable 'j' [-Wunused-variable] int i,j,is,ic,ns,nc,nbor; ^ ../../../src/gmxlib/splitter.c: In function 'split_blocks': ../../../src/gmxlib/splitter.c:316:11: warning: unused variable 'bSHK' [-Wunused-variable] bool bSHK; ^ ../../../src/gmxlib/splitter.c:312:19: warning: unused variable 'last_shk' [-Wunused-variable] int nodeid,last_shk,nbor; ^ ../../../src/gmxlib/splitter.c:311:17: warning: unused variable 'ai' [-Wunused-variable] int i,ii,ai,b0,b1; ^ ../../../src/gmxlib/splitter.c:311:14: warning: unused variable 'ii' [-Wunused-variable] int i,ii,ai,b0,b1; ^ ../../../src/gmxlib/splitter.c: In function 'merge_sid': ../../../src/gmxlib/splitter.c:556:8: warning: unused variable 'nChanged' [-Wunused-variable] int nChanged; ^ ../../../src/gmxlib/splitter.c: In function 'gen_sblocks': ../../../src/gmxlib/splitter.c:654:11: warning: unused variable 'isid' [-Wunused-variable] int isid,nsid; ^ ../../../src/gmxlib/splitter.c:652:27: warning: unused variable 'n' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:20: warning: unused variable 'istart' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:18: warning: unused variable 'k' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c:652:16: warning: unused variable 'j' [-Wunused-variable] int i,i0,j,k,istart,n; ^ ../../../src/gmxlib/splitter.c: In function 'split_top': ../../../src/gmxlib/splitter.c:755:21: warning: unused variable 'minidx' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:755:15: warning: unused variable 'ihome' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:755:7: warning: unused variable 'minhome' [-Wunused-variable] int minhome,ihome,minidx; ^ ../../../src/gmxlib/splitter.c:754:14: warning: unused variable 'ia' [-Wunused-variable] t_iatom *ia; ^ ../../../src/gmxlib/splitter.c:753:31: warning: unused variable 'nrd' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:27: warning: unused variable 'nra' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:13: warning: unused variable 'nvsite_constr' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:753:7: warning: unused variable 'ftype' [-Wunused-variable] int ftype,nvsite_constr,nra,nrd; ^ ../../../src/gmxlib/splitter.c:748:59: warning: unused variable 'nodeid' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:52: warning: unused variable 'bstart' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:47: warning: unused variable 'send' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:40: warning: unused variable 'sstart' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:32: warning: unused variable 'maxatom' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c:748:18: warning: unused variable 'i' [-Wunused-variable] int natoms,i,j,k,mj,atom,maxatom,sstart,send,bstart,nodeid; ^ ../../../src/gmxlib/splitter.c: At top level: ../../../src/gmxlib/splitter.c:726:17: warning: 'block2blocka' defined but not used [-Wunused-function] static t_blocka block2blocka(t_block *block) ^ /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libgmx_mpi_d.la -rpath /usr/lib64 3dview.lo atomprop.lo bondfree.lo calcgrid.lo calch.lo checkpoint.lo confio.lo copyrite.lo disre.lo do_fit.lo enxio.lo ewald_util.lo gmx_fatal.lo ffscanf.lo filenm.lo futil.lo gbutil.lo gmxfio.lo ifunc.lo index.lo cinvsqrtdata.lo invblock.lo macros.lo orires.lo sparsematrix.lo main.lo maths.lo matio.lo mshift.lo mtop_util.lo mtxio.lo mvdata.lo names.lo network.lo nrama.lo nrjac.lo nrnb.lo pargs.lo pbc.lo pdbio.lo princ.lo rando.lo random.lo gmx_random.lo rbin.lo readinp.lo replace.lo rmpbc.lo shift_util.lo sortwater.lo smalloc.lo statutil.lo strdb.lo string2.lo symtab.lo topsort.lo tpxio.lo trnio.lo trxio.lo txtdump.lo typedefs.lo viewit.lo wgms.lo wman.lo writeps.lo xdrd.lo xtcio.lo xvgr.lo libxdrf.lo gmx_arpack.lo dihres.lo tcontrol.lo splitter.lo gmx_cyclecounter.lo nonbonded/libnonbonded.la gmx_blas/libblas.la gmx_lapack/liblapack.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath mpicc -shared .libs/3dview.o .libs/atomprop.o .libs/bondfree.o .libs/calcgrid.o .libs/calch.o .libs/checkpoint.o .libs/confio.o .libs/copyrite.o .libs/disre.o .libs/do_fit.o .libs/enxio.o .libs/ewald_util.o .libs/gmx_fatal.o .libs/ffscanf.o .libs/filenm.o .libs/futil.o .libs/gbutil.o .libs/gmxfio.o .libs/ifunc.o .libs/index.o .libs/cinvsqrtdata.o .libs/invblock.o .libs/macros.o .libs/orires.o .libs/sparsematrix.o .libs/main.o .libs/maths.o .libs/matio.o .libs/mshift.o .libs/mtop_util.o .libs/mtxio.o .libs/mvdata.o .libs/names.o .libs/network.o .libs/nrama.o .libs/nrjac.o .libs/nrnb.o .libs/pargs.o .libs/pbc.o .libs/pdbio.o .libs/princ.o .libs/rando.o .libs/random.o .libs/gmx_random.o .libs/rbin.o .libs/readinp.o .libs/replace.o .libs/rmpbc.o .libs/shift_util.o .libs/sortwater.o .libs/smalloc.o .libs/statutil.o .libs/strdb.o .libs/string2.o .libs/symtab.o .libs/topsort.o .libs/tpxio.o .libs/trnio.o .libs/trxio.o .libs/txtdump.o .libs/typedefs.o .libs/viewit.o .libs/wgms.o .libs/wman.o .libs/writeps.o .libs/xdrd.o .libs/xtcio.o .libs/xvgr.o .libs/libxdrf.o .libs/gmx_arpack.o .libs/dihres.o .libs/tcontrol.o .libs/splitter.o .libs/gmx_cyclecounter.o -Wl,--whole-archive nonbonded/.libs/libnonbonded.a gmx_blas/.libs/libblas.a gmx_lapack/.libs/liblapack.a -Wl,--no-whole-archive -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lgslcblas -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libgmx_mpi_d.so.5 -o .libs/libgmx_mpi_d.so.5.0.0 (cd .libs && rm -f libgmx_mpi_d.so.5 && ln -s libgmx_mpi_d.so.5.0.0 libgmx_mpi_d.so.5) (cd .libs && rm -f libgmx_mpi_d.so && ln -s libgmx_mpi_d.so.5.0.0 libgmx_mpi_d.so) creating libgmx_mpi_d.la (cd .libs && rm -f libgmx_mpi_d.la && ln -s ../libgmx_mpi_d.la libgmx_mpi_d.la) make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' Making all in mdlib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib' /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcmu.lo ../../../src/mdlib/calcmu.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcvir.lo ../../../src/mdlib/calcvir.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o constr.lo ../../../src/mdlib/constr.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o coupling.lo ../../../src/mdlib/coupling.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec.lo ../../../src/mdlib/domdec.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_con.lo ../../../src/mdlib/domdec_con.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_network.lo ../../../src/mdlib/domdec_network.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_setup.lo ../../../src/mdlib/domdec_setup.c mkdir .libs mkdir .libs mkdir: cannot create directory '.libs': File exists mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/calcmu.c -fPIC -DPIC -o .libs/calcmu.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/coupling.c -fPIC -DPIC -o .libs/coupling.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_setup.c -fPIC -DPIC -o .libs/domdec_setup.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_network.c -fPIC -DPIC -o .libs/domdec_network.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec.c -fPIC -DPIC -o .libs/domdec.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/constr.c -fPIC -DPIC -o .libs/constr.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/calcvir.c -fPIC -DPIC -o .libs/calcvir.o ../../../src/mdlib/coupling.c: In function 'berendsen_pcoupl': ../../../src/mdlib/coupling.c:267:11: warning: unused variable 'ptr' [-Wunused-variable] char *ptr,buf[STRLEN]; ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/coupling.c:42: ../../../src/mdlib/coupling.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/update.h:49, from ../../../src/mdlib/coupling.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/update.h:49, from ../../../src/mdlib/coupling.c:42: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_con.c -fPIC -DPIC -o .libs/domdec_con.o ../../../src/mdlib/domdec.c: In function 'dd_move_cellx': ../../../src/mdlib/domdec.c:785:41: warning: unused variable 'k' [-Wunused-variable] int d,d1,dim,dim1,pos,buf_size,i,j,k,p,npulse; ^ ../../../src/mdlib/domdec.c:785:19: warning: unused variable 'dim1' [-Wunused-variable] int d,d1,dim,dim1,pos,buf_size,i,j,k,p,npulse; ^ ../../../src/mdlib/domdec.c: In function 'dd_collect_vec': ../../../src/mdlib/domdec.c:1212:11: warning: unused variable 'buf' [-Wunused-variable] rvec *buf=NULL; ^ ../../../src/mdlib/domdec.c:1211:18: warning: unused variable 'nalloc' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:16: warning: unused variable 'a' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:14: warning: unused variable 'c' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:12: warning: unused variable 'i' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1211:10: warning: unused variable 'n' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c:1210:26: warning: unused variable 'ma' [-Wunused-variable] gmx_domdec_master_t *ma; ^ ../../../src/mdlib/domdec.c: In function 'dd_distribute_vec_scatterv': ../../../src/mdlib/domdec.c:1427:18: warning: unused variable 'nalloc' [-Wunused-variable] int n,i,c,a,nalloc=0; ^ ../../../src/mdlib/domdec.c: In function 'gmx_ddcoord2pmeindex': ../../../src/mdlib/domdec.c:1805:28: warning: unused variable 'nc' [-Wunused-variable] ivec coords,coords_pme,nc; ^ ../../../src/mdlib/domdec.c:1805:17: warning: unused variable 'coords_pme' [-Wunused-variable] ivec coords,coords_pme,nc; ^ ../../../src/mdlib/domdec.c: In function 'make_dd_indices': ../../../src/mdlib/domdec.c:2107:11: warning: variable 'bLocalCG' set but not used [-Wunused-but-set-variable] char *bLocalCG; ^ ../../../src/mdlib/domdec.c: In function 'check_bLocalCG': ../../../src/mdlib/domdec.c:2162:9: warning: unused variable 'ncg' [-Wunused-variable] int ncg,i,ngl,nerr; ^ ../../../src/mdlib/domdec.c: In function 'dd_redistribute_cg': ../../../src/mdlib/domdec.c:3706:49: warning: unused variable 'cell_d' [-Wunused-variable] int c,i,cg,k,k0,k1,d,dim,dim2,dir,d2,d3,d4,cell_d; ^ ../../../src/mdlib/domdec.c:3706:46: warning: unused variable 'd4' [-Wunused-variable] int c,i,cg,k,k0,k1,d,dim,dim2,dir,d2,d3,d4,cell_d; ^ ../../../src/mdlib/domdec.c: In function 'get_load_distribution': ../../../src/mdlib/domdec.c:4326:16: warning: unused variable 'cid' [-Wunused-variable] int d,dim,cid,i,pos; ^ ../../../src/mdlib/domdec.c: In function 'setup_dd_grid': ../../../src/mdlib/domdec.c:4781:10: warning: unused variable 'bZYX' [-Wunused-variable] bool bZYX; ^ ../../../src/mdlib/domdec.c: In function 'check_dlb_support': ../../../src/mdlib/domdec.c:5598:9: warning: label 'edlbYES' defined but not used [-Wunused-label] edlbYES: ^ ../../../src/mdlib/domdec.c:5594:9: warning: label 'edlbAUTO' defined but not used [-Wunused-label] edlbAUTO: ^ ../../../src/mdlib/domdec.c:5592:9: warning: label 'edlbNO' defined but not used [-Wunused-label] edlbNO: ^ ../../../src/mdlib/domdec.c:5553:19: warning: unused variable 'dd' [-Wunused-variable] gmx_domdec_t *dd; ^ ../../../src/mdlib/domdec.c: In function 'init_domain_decomposition': ../../../src/mdlib/domdec.c:5652:14: warning: unused variable 'j' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c:5652:12: warning: unused variable 'i' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c:5652:10: warning: unused variable 'd' [-Wunused-variable] int d,i,j; ^ ../../../src/mdlib/domdec.c: In function 'turn_on_dlb': ../../../src/mdlib/domdec.c:6010:10: warning: unused variable 'buf' [-Wunused-variable] char buf[STRLEN]; ^ ../../../src/mdlib/domdec.c: In function 'dd_init_bondeds': ../../../src/mdlib/domdec.c:6086:10: warning: unused variable 'd' [-Wunused-variable] int d; ^ ../../../src/mdlib/domdec.c:6085:10: warning: unused variable 'bBondComm' [-Wunused-variable] bool bBondComm; ^ ../../../src/mdlib/domdec.c: In function 'setup_dd_communication': ../../../src/mdlib/domdec.c:6486:64: warning: unused variable 'inv_ncg' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:58: warning: unused variable 'r2inc' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:47: warning: unused variable 'r_1' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:43: warning: unused variable 'r_0' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:23: warning: unused variable 'r_scomm2' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c:6486:10: warning: unused variable 'r_mb' [-Wunused-variable] real r_mb,r_comm2,r_scomm2,r_bcomm2,r,r_0,r_1,r2,rb2,r2inc,inv_ncg,tric_sh; ^ ../../../src/mdlib/domdec.c: In function 'dd_partition_system': ../../../src/mdlib/domdec.c:7481:12: warning: unused variable 'j' [-Wunused-variable] int i,j,n,cg0=0,ncg_home_old=-1; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec.c:31: ../../../src/mdlib/domdec.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec.c:31:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/domdec.c:41: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/domdec.c:44: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/calcmu.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/calcmu.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/calcvir.c:42:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/calcvir.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/calcvir.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/calcvir.c:47:13: warning: 'dprod1' defined but not used [-Wunused-function] static void dprod1(rvec vir,real x,rvec f) ^ ../../../src/mdlib/calcvir.c:160:13: warning: 'lo_fcv2' defined but not used [-Wunused-function] static void lo_fcv2(int i0,int i1, ^ ../../../src/mdlib/domdec_setup.c: In function 'guess_npme': ../../../src/mdlib/domdec_setup.c:83:13: warning: unused variable 'try' [-Wunused-variable] t_inputrec try; ^ ../../../src/mdlib/domdec_setup.c:82:16: warning: unused variable 'nky' [-Wunused-variable] int npme,nkx,nky,ndiv,*div,*mdiv,ldiv; ^ ../../../src/mdlib/domdec_setup.c:82:12: warning: unused variable 'nkx' [-Wunused-variable] int npme,nkx,nky,ndiv,*div,*mdiv,ldiv; ^ ../../../src/mdlib/domdec_setup.c: In function 'assign_factors': ../../../src/mdlib/domdec_setup.c:329:13: warning: unused variable 'z' [-Wunused-variable] int x,y,z,i; ^ ../../../src/mdlib/domdec_setup.c: In function 'dd_choose_grid': ../../../src/mdlib/domdec_setup.c:493:19: warning: unused variable 'nky' [-Wunused-variable] int npme,nkx,nky; ^ ../../../src/mdlib/domdec_setup.c:493:15: warning: unused variable 'nkx' [-Wunused-variable] int npme,nkx,nky; ^ ../../../src/mdlib/domdec_setup.c:493:10: warning: unused variable 'npme' [-Wunused-variable] int npme,nkx,nky; ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/domdec_setup.c:29: ../../../src/mdlib/domdec_setup.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_setup.c:32: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_setup.c:32:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o domdec_top.lo ../../../src/mdlib/domdec_top.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ebin.lo ../../../src/mdlib/ebin.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o edsam.lo ../../../src/mdlib/edsam.c ../../../src/mdlib/constr.c: In function 'too_many_constraint_warnings': ../../../src/mdlib/constr.c:132:9: warning: unused variable 'abort' [-Wunused-variable] char *abort="- aborting to avoid logfile runaway.\n" ^ ../../../src/mdlib/domdec_con.c: In function 'dd_make_local_vsites': ../../../src/mdlib/domdec_con.c:925:25: warning: unused variable 'gat' [-Wunused-variable] int ftype,nral,i,j,gat,a; ^ ../../../src/mdlib/domdec_con.c: In function 'init_domdec_vsites': ../../../src/mdlib/constr.c: In function 'constrain': ../../../src/mdlib/domdec_con.c:1047:31: warning: unused variable 'dc' [-Wunused-variable] gmx_domdec_constraints_t *dc; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_con.c:25: ../../../src/mdlib/domdec_con.c: At top level: ../../../src/mdlib/constr.c:234:11: warning: unused variable 'ncons' [-Wunused-variable] int ncons,error; ^ ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_con.c:25:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/constr.c: In function 'init_constraints': ../../../src/mdlib/constr.c:772:37: warning: unused variable 'natoms' [-Wunused-variable] int ncon,nset,nmol,settle_type,i,natoms,mt,nflexcon; ^ ../../../src/mdlib/constr.c: In function 'inter_charge_group_constraints': ../../../src/mdlib/constr.c:903:8: warning: unused variable 'nat' [-Wunused-variable] int nat,*at2cg,cg,a,i; ^ In file included from ../../../src/mdlib/constr.c:42:0: ../../../src/mdlib/constr.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/constr.c:45: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/mdlib/constr.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/mdlib/constr.c:45: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/constr.c:53:0: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/mdlib/constr.c:110:12: warning: 'icomp' defined but not used [-Wunused-function] static int icomp(const void *p1, const void *p2) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/domdec_top.c -fPIC -DPIC -o .libs/domdec_top.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ebin.c -fPIC -DPIC -o .libs/ebin.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/edsam.c -fPIC -DPIC -o .libs/edsam.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ewald.lo ../../../src/mdlib/ewald.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fftgrid.lo ../../../src/mdlib/fftgrid.c ../../../src/mdlib/domdec_top.c: In function 'print_missing_interactions_mb': ../../../src/mdlib/domdec_top.c:113:56: warning: unused variable 'a_gl' [-Wunused-variable] int ftype,ftype_j,nral,i,j_mol,j,k,a0,a0_mol,mol,a,a_gl; ^ ../../../src/mdlib/domdec_top.c:113:38: warning: unused variable 'k' [-Wunused-variable] int ftype,ftype_j,nral,i,j_mol,j,k,a0,a0_mol,mol,a,a_gl; ^ ../../../src/mdlib/domdec_top.c: In function 'global_atomnr_to_moltype_ind': ../../../src/mdlib/domdec_top.c:349:7: warning: unused variable 'molb' [-Wunused-variable] int molb; ^ ../../../src/mdlib/domdec_top.c: In function 'count_excls': ../../../src/mdlib/domdec_top.c:364:11: warning: unused variable 'n_inter' [-Wunused-variable] int n,n_inter,cg,at0,at1,at,excl,atj; ^ ../../../src/mdlib/domdec_top.c: In function 'dd_make_reverse_top': ../../../src/mdlib/domdec_top.c:611:19: warning: unused variable 'n_recursive_vsite' [-Wunused-variable] int mb,natoms,n_recursive_vsite,nexcl,nexcl_icg,a; ^ ../../../src/mdlib/domdec_top.c: In function 'add_vsite': ../../../src/mdlib/domdec_top.c:760:37: warning: unused variable 'iatoms_r' [-Wunused-variable] t_iatom tiatoms[1+MAXATOMLIST],*iatoms_r; ^ ../../../src/mdlib/domdec_top.c: In function 'dd_make_local_top': ../../../src/mdlib/domdec_top.c:1408:10: warning: unused variable 'bUniqueExcl' [-Wunused-variable] bool bUniqueExcl,bRCheckMB,bRCheck2B,bRCheckExcl; ^ ../../../src/mdlib/domdec_top.c: In function 'check_link': ../../../src/mdlib/domdec_top.c:1590:12: warning: unused variable 'aj' [-Wunused-variable] int k,aj; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/domdec_top.c:31: ../../../src/mdlib/domdec_top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/domdec_top.c:31:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/fftgrid.c -fPIC -DPIC -o .libs/fftgrid.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/edsam.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/edsam.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/edsam.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/edsam.c:316:13: warning: 'dump_xcoll' defined but not used [-Wunused-function] static void dump_xcoll(t_edpar *edi, struct t_do_edsam *buf, t_commrec *cr, int step) ^ ../../../src/mdlib/edsam.c:387:13: warning: 'dump_edi' defined but not used [-Wunused-function] static void dump_edi(t_edpar *edpars, t_commrec *cr, int nr_edi) ^ ../../../src/mdlib/edsam.c:439:13: warning: 'dump_rotmat' defined but not used [-Wunused-function] static void dump_rotmat(FILE* out,matrix rotmat) ^ ../../../src/mdlib/edsam.c:448:13: warning: 'dump_rvec' defined but not used [-Wunused-function] static void dump_rvec(FILE *out, int dim, rvec *x) ^ ../../../src/mdlib/edsam.c:459:13: warning: 'dump_mat' defined but not used [-Wunused-function] static void dump_mat(FILE* out, int dim, double** mat) ^ ../../../src/mdlib/edsam.c:964:13: warning: 'get_flood_enx_names' defined but not used [-Wunused-function] static void get_flood_enx_names(t_edpar *edi, char** names, int *nnames) /* get header of energies */ ^ ../../../src/mdlib/edsam.c:983:13: warning: 'get_flood_energies' defined but not used [-Wunused-function] static void get_flood_energies(t_edpar *edi, real Vfl[],int nnames) ^ In file included from ../../../include/fftgrid.h:46:0, from ../../../src/mdlib/fftgrid.c:51: ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ewald.c -fPIC -DPIC -o .libs/ewald.o ../../../src/mdlib/ebin.c: In function 'add_ebin': ../../../src/mdlib/ebin.c:89:18: warning: unused variable 'sigma' [-Wunused-variable] double e,sum,sigma,invmm,diff; ^ ../../../src/mdlib/ebin.c:89:14: warning: unused variable 'sum' [-Wunused-variable] double e,sum,sigma,invmm,diff; ^ In file included from ../../../src/mdlib/ebin.c:50:0: ../../../src/mdlib/ebin.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ebin.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/ewald.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ewald.c:43:0: ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/ewald.c:44:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o force.lo ../../../src/mdlib/force.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ghat.lo ../../../src/mdlib/ghat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/force.c -fPIC -DPIC -o .libs/force.o ../../../src/mdlib/force.c: In function 'check_solvent_cg': ../../../src/mdlib/force.c:162:23: warning: unused variable 'excl' [-Wunused-variable] const t_blocka * excl; ^ ../../../src/mdlib/force.c: In function 'check_solvent': ../../../src/mdlib/force.c:406:23: warning: variable 'mols' set but not used [-Wunused-but-set-variable] const t_block * mols; ^ ../../../src/mdlib/force.c: In function 'set_avcsixtwelve': ../../../src/mdlib/force.c:687:46: warning: unused variable 'n' [-Wunused-variable] int mb,nmol,nmolc,i,j,tpi,tpj,j1,j2,k,n,nexcl,q; ^ ../../../src/mdlib/force.c: In function 'init_forcerec': ../../../src/mdlib/force.c:1048:16: warning: variable 'nbl' set but not used [-Wunused-but-set-variable] t_nblists *nbl; ^ ../../../src/mdlib/force.c:1043:26: warning: unused variable 'ngrp' [-Wunused-variable] int i,j,m,natoms,ngrp,negp_pp,negptable,egi,egj; ^ ../../../src/mdlib/force.c:1043:15: warning: unused variable 'j' [-Wunused-variable] int i,j,m,natoms,ngrp,negp_pp,negptable,egi,egj; ^ ../../../src/mdlib/force.c: In function 'do_force_lowlevel': ../../../src/mdlib/force.c:1540:13: warning: unused variable 'bDoEpot' [-Wunused-variable] bool bDoEpot,bSepDVDL,bSB; ^ ../../../src/mdlib/force.c:1539:15: warning: unused variable 'nit' [-Wunused-variable] int i,nit,status; ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/force.c:62: ../../../src/mdlib/force.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/mdlib/force.c:64: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/mdlib/force.c:64: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/force.c:69:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ghat.c -fPIC -DPIC -o .libs/ghat.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o init.lo ../../../src/mdlib/init.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/init.c -fPIC -DPIC -o .libs/init.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/ghat.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ghat.c:44:0: ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/ghat.c:47: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/init.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/init.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/init.c:51: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/init.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdatom.lo ../../../src/mdlib/mdatom.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdebin.lo ../../../src/mdlib/mdebin.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o minimize.lo ../../../src/mdlib/minimize.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mvxvf.lo ../../../src/mdlib/mvxvf.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ns.lo ../../../src/mdlib/ns.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mdatom.c -fPIC -DPIC -o .libs/mdatom.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mdebin.c -fPIC -DPIC -o .libs/mdebin.o ../../../src/mdlib/mdatom.c: In function 'init_mdatoms': ../../../src/mdlib/mdatom.c:56:12: warning: unused variable 'ilist' [-Wunused-variable] t_ilist *ilist; ^ ../../../src/mdlib/mdatom.c:51:17: warning: unused variable 'nmol' [-Wunused-variable] int mb,a,g,nmol; ^ ../../../src/mdlib/mdatom.c:51:15: warning: unused variable 'g' [-Wunused-variable] int mb,a,g,nmol; ^ ../../../src/mdlib/mdatom.c:51:10: warning: unused variable 'mb' [-Wunused-variable] int mb,a,g,nmol; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/mvxvf.c -fPIC -DPIC -o .libs/mvxvf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/ns.c -fPIC -DPIC -o .libs/ns.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/minimize.c -fPIC -DPIC -o .libs/minimize.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nsgrid.lo ../../../src/mdlib/nsgrid.c ../../../src/mdlib/mdebin.c: In function 'print_ebin': ../../../src/mdlib/mdebin.c:530:31: warning: unused variable 'nor' [-Wunused-variable] int i,j,n,ni,nj,ndr,nor; ^ ../../../src/mdlib/mdebin.c:530:27: warning: unused variable 'ndr' [-Wunused-variable] int i,j,n,ni,nj,ndr,nor; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/mdebin.c:48: ../../../src/mdlib/mdebin.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/mdebin.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/mvxvf.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/mvxvf.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/ns.c: In function 'new_i_nblist': ../../../src/mdlib/ns.c:394:20: warning: unused variable 'nshift' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c:394:14: warning: unused variable 'k' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c:394:12: warning: unused variable 'i' [-Wunused-variable] int i,k,nri,nshift; ^ ../../../src/mdlib/ns.c: In function 'put_in_list': ../../../src/mdlib/ns.c:546:25: warning: unused variable 'rlj' [-Wunused-variable] real qi,qiB,qq,rlj; ^ ../../../src/mdlib/ns.c:546:22: warning: unused variable 'qq' [-Wunused-variable] real qi,qiB,qq,rlj; ^ ../../../src/mdlib/ns.c:541:23: warning: unused variable 'len' [-Wunused-variable] int i0,nicg,len; ^ ../../../src/mdlib/ns.c:539:39: warning: unused variable 'ind_ij' [-Wunused-variable] int i,j,jcg,igid,gid,nbl_ind,ind_ij; ^ ../../../src/mdlib/ns.c: In function 'ns_inner_tric': ../../../src/mdlib/ns.c:1283:15: warning: unused variable 'nsbuf' [-Wunused-variable] t_ns_buf *nsbuf; ^ ../../../src/mdlib/ns.c: In function 'ns_inner_rect': ../../../src/mdlib/ns.c:1314:15: warning: unused variable 'nsbuf' [-Wunused-variable] t_ns_buf *nsbuf; ^ ../../../src/mdlib/ns.c: In function 'ns_simple_core': ../../../src/mdlib/ns.c:1365:38: warning: unused variable 'nri' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c:1365:35: warning: unused variable 'i0' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c:1365:26: warning: unused variable 'jcg' [-Wunused-variable] int nsearch,icg,jcg,igid,i0,nri,nn; ^ ../../../src/mdlib/ns.c: In function 'nsgrid_core': ../../../src/mdlib/ns.c:1674:58: warning: unused variable 'dcz' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1674:54: warning: unused variable 'dcy' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1674:50: warning: unused variable 'dcx' [-Wunused-variable] real r2,rs2,rvdw2,rcoul2,rm2,rl2,XI,YI,ZI,dcx,dcy,dcz,tmp1,tmp2; ^ ../../../src/mdlib/ns.c:1673:13: warning: unused variable 'xi' [-Wunused-variable] rvec xi,*cgcm,grid_offset; ^ ../../../src/mdlib/ns.c:1669:42: warning: unused variable 'nri' [-Wunused-variable] int cg0,cg1,icg=-1,cgsnr,i0,igid,nri,naaj,max_jcg; ^ ../../../src/mdlib/ns.c:1666:45: warning: variable 'grid_z' set but not used [-Wunused-but-set-variable] real gridx,gridy,gridz,grid_x,grid_y,grid_z; ^ ../../../src/mdlib/ns.c: In function 'init_ns': ../../../src/mdlib/ns.c:2177:11: warning: unused variable 'ptr' [-Wunused-variable] char *ptr; ^ ../../../src/mdlib/ns.c: In function 'search_neighbours': ../../../src/mdlib/ns.c:2280:23: warning: unused variable 'cg_end' [-Wunused-variable] int cg_start,cg_end,start,end; ^ ../../../src/mdlib/ns.c:2280:14: warning: unused variable 'cg_start' [-Wunused-variable] int cg_start,cg_end,start,end; ^ ../../../src/mdlib/ns.c:2279:15: warning: unused variable 'i_egp_flags' [-Wunused-variable] bool *i_egp_flags; ^ ../../../src/mdlib/ns.c:2278:15: warning: unused variable 'ptr' [-Wunused-variable] char *ptr; ^ ../../../src/mdlib/ns.c:2274:16: warning: unused variable 'j' [-Wunused-variable] int i,j,m,ngid; ^ ../../../src/mdlib/ns.c:2274:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,ngid; ^ In file included from ../../../src/mdlib/ns.c:50:0: ../../../src/mdlib/ns.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/ns.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/ns.c:54:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/minimize.c: In function 'get_f_norm_max': ../../../src/mdlib/minimize.c:153:14: warning: unused variable 'fmax2_0' [-Wunused-variable] real fmax2,fmax2_0,fam; ^ ../../../src/mdlib/minimize.c: In function 'evaluate_energy': ../../../src/mdlib/minimize.c:573:12: warning: unused variable 'state' [-Wunused-variable] t_state *state; ^ ../../../src/mdlib/minimize.c: In function 'do_cg': ../../../src/mdlib/minimize.c:813:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate=0; ^ ../../../src/mdlib/minimize.c:798:26: warning: unused variable 'sum' [-Wunused-variable] double gpa,gpb,gpc,tmp,sum[2],minstep; ^ ../../../src/mdlib/minimize.c:797:28: warning: unused variable 'sfm' [-Wunused-variable] rvec *f_global,*p,*sf,*sfm; ^ ../../../src/mdlib/minimize.c: In function 'do_lbfgs': ../../../src/mdlib/minimize.c:1329:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate; ^ ../../../src/mdlib/minimize.c:1320:20: warning: variable 'first' set but not used [-Wunused-but-set-variable] bool converged,first; ^ ../../../src/mdlib/minimize.c: In function 'do_steep': ../../../src/mdlib/minimize.c:1957:10: warning: unused variable 'terminate' [-Wunused-variable] real terminate=0; ^ ../../../src/mdlib/minimize.c:1946:16: warning: unused variable 'dvdlambda' [-Wunused-variable] real ustep,dvdlambda,fnormn; ^ ../../../src/mdlib/minimize.c:1945:19: warning: unused variable 'constepsize' [-Wunused-variable] real stepsize,constepsize; ^ ../../../src/mdlib/minimize.c: In function 'do_nm': ../../../src/mdlib/minimize.c:2163:22: warning: unused variable 'fmax' [-Wunused-variable] real fnorm,fmax; ^ ../../../src/mdlib/minimize.c:2163:16: warning: unused variable 'fnorm' [-Wunused-variable] real fnorm,fmax; ^ ../../../src/mdlib/minimize.c:2151:16: warning: unused variable 'nfmax' [-Wunused-variable] int nfmax,count; ^ ../../../src/mdlib/minimize.c:2149:16: warning: unused variable 'bNS' [-Wunused-variable] bool bNS; ^ ../../../src/mdlib/minimize.c:2148:18: warning: variable 'lambda' set but not used [-Wunused-but-set-variable] real t,lambda,t0,lam0; ^ ../../../src/mdlib/minimize.c: In function 'do_tpi': ../../../src/mdlib/minimize.c:2419:18: warning: unused variable 'end' [-Wunused-variable] int i,start,end; ^ ../../../src/mdlib/minimize.c:2419:12: warning: unused variable 'start' [-Wunused-variable] int i,start,end; ^ ../../../src/mdlib/minimize.c:2404:15: warning: unused variable 'TPI' [-Wunused-variable] const char *TPI="Test Particle Insertion"; ^ In file included from ../../../src/mdlib/minimize.c:47:0: ../../../src/mdlib/minimize.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/update.h:49, from ../../../src/mdlib/minimize.c:59: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/update.h:49, from ../../../src/mdlib/minimize.c:59: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/minimize.c:63: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/minimize.c:83: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/mdlib/minimize.c:493:13: warning: 'do_x_step' defined but not used [-Wunused-function] static void do_x_step(t_commrec *cr,int n,rvec *x1,real a,rvec *f,rvec *x2) ^ ../../../src/mdlib/minimize.c:515:13: warning: 'do_x_sub' defined but not used [-Wunused-function] static void do_x_sub(t_commrec *cr,int n,rvec *x1,rvec *x2,real a,rvec *f) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/nsgrid.c -fPIC -DPIC -o .libs/nsgrid.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o perf_est.lo ../../../src/mdlib/perf_est.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pme.lo ../../../src/mdlib/pme.c ../../../src/mdlib/nsgrid.c: In function 'init_grid': ../../../src/mdlib/nsgrid.c:181:10: warning: unused variable 'm' [-Wunused-variable] int d,m; ^ ../../../src/mdlib/nsgrid.c:181:8: warning: unused variable 'd' [-Wunused-variable] int d,m; ^ ../../../src/mdlib/nsgrid.c: In function 'grid_first': ../../../src/mdlib/nsgrid.c:278:10: warning: unused variable 'cx' [-Wunused-variable] ivec cx; ^ ../../../src/mdlib/nsgrid.c: In function 'fill_grid': ../../../src/mdlib/nsgrid.c:421:10: warning: variable 'nrx' set but not used [-Wunused-but-set-variable] int nrx,nry,nrz; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/nsgrid.c:47: ../../../src/mdlib/nsgrid.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/nsgrid.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/perf_est.c -fPIC -DPIC -o .libs/perf_est.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pme.c -fPIC -DPIC -o .libs/pme.o ../../../src/mdlib/perf_est.c: In function 'n_bonded_dx': ../../../src/mdlib/perf_est.c:62:2: warning: label 'F_CONNBONDS' defined but not used [-Wunused-label] F_CONNBONDS: ndxb = 0; break; ^ ../../../src/mdlib/perf_est.c:61:2: warning: label 'F_POSRES' defined but not used [-Wunused-label] F_POSRES: ndxb = 1; break; ^ ../../../src/mdlib/perf_est.c: In function 'pme_load_estimate': ../../../src/mdlib/perf_est.c:89:21: warning: unused variable 'fljtab' [-Wunused-variable] float fq,fqlj,flj,fljtab,fqljw,fqw,fqspread,ffft,fbond; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/perf_est.c:41: ../../../src/mdlib/perf_est.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/perf_est.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pme_pp.lo ../../../src/mdlib/pme_pp.c ../../../src/mdlib/pme.c: In function 'init_atomcomm': ../../../src/mdlib/pme.c:1441:22: warning: unused variable 'pgc' [-Wunused-variable] pme_grid_comm_t *pgc; ^ ../../../src/mdlib/pme.c:1440:12: warning: unused variable 'nk' [-Wunused-variable] int nn,nk; ^ ../../../src/mdlib/pme.c:1440:9: warning: unused variable 'nn' [-Wunused-variable] int nn,nk; ^ ../../../src/mdlib/pme.c:1439:27: warning: unused variable 'i' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:25: warning: unused variable 'b' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:19: warning: unused variable 'maxlr' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:14: warning: unused variable 'rbnd' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c:1439:9: warning: unused variable 'lbnd' [-Wunused-variable] int lbnd,rbnd,maxlr,b,i; ^ ../../../src/mdlib/pme.c: In function 'gmx_pme_init': ../../../src/mdlib/pme.c:1541:25: warning: unused variable 'maxlr' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:20: warning: unused variable 'rbnd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:15: warning: unused variable 'lbnd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:11: warning: unused variable 'd' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ ../../../src/mdlib/pme.c:1541:9: warning: unused variable 'b' [-Wunused-variable] int b,d,i,lbnd,rbnd,maxlr; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pme.c:70: ../../../src/mdlib/pme.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pme.c:70:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/pme.c:71:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../src/mdlib/pme.c:81:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/pme.c:198:13: warning: 'pr_grid_dist' defined but not used [-Wunused-function] static void pr_grid_dist(FILE *fp,char *title,t_fftgrid *grid) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pppm.lo ../../../src/mdlib/pppm.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o partdec.lo ../../../src/mdlib/partdec.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pme_pp.c -fPIC -DPIC -o .libs/pme_pp.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pull.lo ../../../src/mdlib/pull.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pullutil.lo ../../../src/mdlib/pullutil.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pppm.c -fPIC -DPIC -o .libs/pppm.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/partdec.c -fPIC -DPIC -o .libs/partdec.o ../../../src/mdlib/partdec.c: In function 'gmx_tx': ../../../src/mdlib/partdec.c:83:14: warning: unused variable 'status' [-Wunused-variable] MPI_Status status; ^ ../../../src/mdlib/partdec.c:82:18: warning: unused variable 'flag' [-Wunused-variable] int tag,flag; ^ ../../../src/mdlib/partdec.c: In function 'pr_idef_division': ../../../src/mdlib/partdec.c:343:15: warning: variable 'nr' set but not used [-Wunused-but-set-variable] int i,ftype,nr,nra,m0,m1; ^ ../../../src/mdlib/partdec.c: In function 'create_vsitelist': ../../../src/mdlib/partdec.c:477:7: warning: unused variable 'minidx' [-Wunused-variable] int minidx; ^ ../../../src/mdlib/partdec.c: In function 'setup_parallel_vsites': ../../../src/mdlib/partdec.c:511:15: warning: unused variable 'k' [-Wunused-variable] int i,inr,j,k,ftype; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pullutil.c -fPIC -DPIC -o .libs/pullutil.o In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pme_pp.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pme_pp.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/pme_pp.c:49: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/pull.c -fPIC -DPIC -o .libs/pull.o ../../../src/mdlib/pullutil.c: In function 'pull_set_pbcatom': ../../../src/mdlib/pullutil.c:85:9: warning: unused variable 'm' [-Wunused-variable] int a,m; ^ ../../../src/mdlib/pullutil.c: In function 'pull_calc_coms': ../../../src/mdlib/pullutil.c:278:9: warning: unused variable 'xx' [-Wunused-variable] rvec *xx[2],x_pbc={0,0,0},dx; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/pullutil.c:45: ../../../src/mdlib/pullutil.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pullutil.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pullutil.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pppm.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pppm.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/mdlib/pppm.c:51: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/pppm.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/pppm.c:616:12: warning: 'gmx_pppm_opt_do' defined but not used [-Wunused-function] static int gmx_pppm_opt_do(FILE *log, gmx_pme_t pme, ^ ../../../src/mdlib/pull.c: In function 'apply_forces_grp': ../../../src/mdlib/pull.c:155:20: warning: variable 'end' set but not used [-Wunused-but-set-variable] int i,ii,m,start,end; ^ ../../../src/mdlib/pull.c: In function 'do_constraint': ../../../src/mdlib/pull.c:283:22: warning: unused variable 'mass' [-Wunused-variable] double lambda, rm, mass, invdt=0; ^ ../../../src/mdlib/pull.c:282:10: warning: unused variable 'd0' [-Wunused-variable] double d0,inpr; ^ ../../../src/mdlib/pull.c: In function 'init_pull_group_index': ../../../src/mdlib/pull.c:779:16: warning: variable 'ga2la' set but not used [-Wunused-but-set-variable] gmx_ga2la_t *ga2la=NULL; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/pull.c:46: ../../../src/mdlib/pull.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/pull.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/pull.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/pull.c:60: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o rf_util.lo ../../../src/mdlib/rf_util.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shakef.lo ../../../src/mdlib/shakef.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/rf_util.c -fPIC -DPIC -o .libs/rf_util.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sim_util.lo ../../../src/mdlib/sim_util.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/shakef.c -fPIC -DPIC -o .libs/shakef.o ../../../src/mdlib/rf_util.c: In function 'RF_excl_correction': ../../../src/mdlib/rf_util.c:59:10: warning: unused variable 'top' [-Wunused-variable] int top,i,j,j1,j2,k,ki; ^ In file included from ../../../src/mdlib/rf_util.c:42:0: ../../../src/mdlib/rf_util.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/rf_util.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/rf_util.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/rf_util.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/sim_util.c -fPIC -DPIC -o .libs/sim_util.o ../../../src/mdlib/shakef.c: In function 'cshake': ../../../src/mdlib/shakef.c:79:19: warning: unused variable 'tjz' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:79:15: warning: unused variable 'tjy' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:79:11: warning: unused variable 'tjx' [-Wunused-variable] real tjx,tjy,tjz; ^ ../../../src/mdlib/shakef.c:78:19: warning: unused variable 'tiz' [-Wunused-variable] real tix,tiy,tiz; ^ ../../../src/mdlib/shakef.c:78:15: warning: unused variable 'tiy' [-Wunused-variable] real tix,tiy,tiz; ^ ../../../src/mdlib/shakef.c:78:11: warning: unused variable 'tix' [-Wunused-variable] real tix,tiy,tiz; ^ ../../../src/mdlib/sim_util.c: In function 'calc_virial': ../../../src/mdlib/sim_util.c:250:10: warning: unused variable 'virtest' [-Wunused-variable] tensor virtest; ^ ../../../src/mdlib/sim_util.c:249:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/mdlib/sim_util.c: In function 'do_force': ../../../src/mdlib/sim_util.c:348:15: warning: unused variable 'box_size' [-Wunused-variable] static rvec box_size; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/shakef.c:46: ../../../src/mdlib/shakef.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/shakef.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/shakef.c:51:13: warning: 'pv' defined but not used [-Wunused-function] static void pv(FILE *log,char *s,rvec x) ^ ../../../src/mdlib/sim_util.c: In function 'calc_enervirdiff': ../../../src/mdlib/sim_util.c:823:13: warning: variable 'r1' set but not used [-Wunused-but-set-variable] double r0,r1,r,rc3,rc9,ea,eb,ec,pa,pb,pc,pd; ^ ../../../src/mdlib/sim_util.c: In function 'finish_run': ../../../src/mdlib/sim_util.c:1134:14: warning: unused variable 'status' [-Wunused-variable] MPI_Status status; ^ ../../../src/mdlib/sim_util.c:1133:10: warning: unused variable 'nrnb_buf' [-Wunused-variable] double nrnb_buf[4]; ^ ../../../src/mdlib/sim_util.c:1132:10: warning: unused variable 'sender' [-Wunused-variable] int sender; ^ ../../../src/mdlib/sim_util.c: In function 'init_md': ../../../src/mdlib/sim_util.c:1222:13: warning: unused variable 'mod' [-Wunused-variable] real tmpt,mod; ^ ../../../src/mdlib/sim_util.c:1222:8: warning: unused variable 'tmpt' [-Wunused-variable] real tmpt,mod; ^ ../../../src/mdlib/sim_util.c:1221:12: warning: unused variable 'n' [-Wunused-variable] int i,j,n; ^ ../../../src/mdlib/sim_util.c:1221:10: warning: unused variable 'j' [-Wunused-variable] int i,j,n; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/sim_util.c:57: ../../../src/mdlib/sim_util.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/sim_util.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/pme.h:46:0, from ../../../src/mdlib/sim_util.c:68: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../src/mdlib/sim_util.c:78:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o shellfc.lo ../../../src/mdlib/shellfc.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o stat.lo ../../../src/mdlib/stat.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tables.lo ../../../src/mdlib/tables.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/shellfc.c -fPIC -DPIC -o .libs/shellfc.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/stat.c -fPIC -DPIC -o .libs/stat.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/tables.c -fPIC -DPIC -o .libs/tables.o ../../../src/mdlib/shellfc.c: In function 'predict_shells': ../../../src/mdlib/shellfc.c:115:18: warning: unused variable 'dt_3' [-Wunused-variable] real dt_1,dt_2,dt_3,fudge,tm,m1,m2,m3; ^ ../../../src/mdlib/shellfc.c:115:13: warning: unused variable 'dt_2' [-Wunused-variable] real dt_1,dt_2,dt_3,fudge,tm,m1,m2,m3; ^ ../../../src/mdlib/shellfc.c: In function 'init_shell_flexcon': ../../../src/mdlib/shellfc.c:197:32: warning: unused variable 'mt' [-Wunused-variable] int i,j,nmol,type,mb,mt,a_offset,cg,mol,ftype,nra; ^ ../../../src/mdlib/shellfc.c:197:19: warning: unused variable 'nmol' [-Wunused-variable] int i,j,nmol,type,mb,mt,a_offset,cg,mol,ftype,nra; ^ ../../../src/mdlib/shellfc.c: In function 'init_adir': ../../../src/mdlib/shellfc.c:694:12: warning: unused variable 'dx' [-Wunused-variable] rvec p,dx; ^ ../../../src/mdlib/shellfc.c:694:10: warning: unused variable 'p' [-Wunused-variable] rvec p,dx; ^ ../../../src/mdlib/shellfc.c:691:13: warning: unused variable 'scale' [-Wunused-variable] real dt,scale; ^ ../../../src/mdlib/shellfc.c:690:16: warning: unused variable 'gt' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c:690:13: warning: unused variable 'ga' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c:690:10: warning: unused variable 'gf' [-Wunused-variable] int gf,ga,gt; ^ ../../../src/mdlib/shellfc.c: In function 'relax_shell_flexcon': ../../../src/mdlib/shellfc.c:776:19: warning: unused variable 'g' [-Wunused-variable] int nflexcon,g,number_steps,d,Min=0,count=0; ^ ../../../src/mdlib/shellfc.c:772:10: warning: unused variable 'cbuf' [-Wunused-variable] char cbuf[56]; ^ ../../../src/mdlib/shellfc.c:771:19: warning: unused variable 'xiS' [-Wunused-variable] real ftol,xiH,xiS,dum=0; ^ ../../../src/mdlib/shellfc.c:771:15: warning: unused variable 'xiH' [-Wunused-variable] real ftol,xiH,xiS,dum=0; ^ ../../../src/mdlib/shellfc.c:769:10: warning: unused variable 'dx' [-Wunused-variable] rvec dx; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/shellfc.c:43: ../../../src/mdlib/shellfc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/shellfc.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/shellfc.c:45: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/shellfc.c:55:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/stat.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/stat.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/stat.c:53:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/mdlib/stat.c:63: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tgroup.lo ../../../src/mdlib/tgroup.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o update.lo ../../../src/mdlib/update.c ../../../src/mdlib/tables.c: In function 'done_tabledata': ../../../src/mdlib/tables.c:470:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/mdlib/tables.c: In function 'make_tables': ../../../src/mdlib/tables.c:835:17: warning: unused variable 'j' [-Wunused-variable] int i,j,k,nx,nx0,tabsel[etiNR]; ^ ../../../src/mdlib/tables.c: In function 'make_bonded_table': ../../../src/mdlib/tables.c:950:10: warning: variable 'start' set but not used [-Wunused-but-set-variable] double start; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/tables.c:47: ../../../src/mdlib/tables.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/tables.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/tables.c:51:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/tables.c:155:13: warning: 'splint' defined but not used [-Wunused-function] static void splint(real xa[],real ya[],real y2a[], ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/tgroup.c -fPIC -DPIC -o .libs/tgroup.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/update.c -fPIC -DPIC -o .libs/update.o ../../../src/mdlib/tgroup.c: In function 'init_grptcstat': ../../../src/mdlib/tgroup.c:57:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/tgroup.c:48: ../../../src/mdlib/tgroup.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/tgroup.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/tgroup.c:51: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/tgroup.c:141:13: warning: 'accumulate_ekin' defined but not used [-Wunused-function] static void accumulate_ekin(t_commrec *cr,t_grpopts *opts, ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vcm.lo ../../../src/mdlib/vcm.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vsite.lo ../../../src/mdlib/vsite.c ../../../src/mdlib/update.c: In function 'update': ../../../src/mdlib/update.c:771:39: warning: unused variable 'g' [-Wunused-variable] int start,homenr,i,n,m,g; ^ ../../../src/mdlib/update.c:770:20: warning: variable 'dt_1' set but not used [-Wunused-but-set-variable] real dt_1; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/update.c:50: ../../../src/mdlib/update.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/update.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/update.h:48:0, from ../../../src/mdlib/update.c:53: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/update.c:62:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/vsite.c -fPIC -DPIC -o .libs/vsite.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wall.lo ../../../src/mdlib/wall.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/vcm.c -fPIC -DPIC -o .libs/vcm.o ../../../src/mdlib/vcm.c: In function 'calc_vcm_grp': ../../../src/mdlib/vcm.c:122:28: warning: unused variable 'zz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:25: warning: unused variable 'yz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:22: warning: unused variable 'yy' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:19: warning: unused variable 'xz' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:16: warning: unused variable 'xy' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c:122:13: warning: unused variable 'xx' [-Wunused-variable] real m0,xx,xy,xz,yy,yz,zz; ^ ../../../src/mdlib/vcm.c: In function 'do_stopcm_grp': ../../../src/mdlib/vcm.c:171:11: warning: unused variable 'tm_1' [-Wunused-variable] real tm,tm_1; ^ ../../../src/mdlib/vcm.c:171:8: warning: unused variable 'tm' [-Wunused-variable] real tm,tm_1; ^ ../../../src/mdlib/vcm.c:170:12: warning: unused variable 'm' [-Wunused-variable] int i,g,m; ^ ../../../src/mdlib/vcm.c: In function 'check_cm_grp': ../../../src/mdlib/vcm.c:250:14: warning: unused variable 'Tcm' [-Wunused-variable] tensor Icm,Tcm; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/vcm.c:43: ../../../src/mdlib/vcm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/vcm.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/mdlib/vsite.c: In function 'constr_vsiten': ../../../src/mdlib/vsite.c:437:8: warning: unused variable 'xs' [-Wunused-variable] rvec xs,x1,dx; ^ ../../../src/mdlib/vsite.c: In function 'construct_vsites': ../../../src/mdlib/vsite.c:484:25: warning: unused variable 'rtmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:484:20: warning: unused variable 'vtmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:484:13: warning: unused variable 'reftmp' [-Wunused-variable] rvec reftmp,vtmp,rtmp; ^ ../../../src/mdlib/vsite.c:478:19: warning: unused variable 'ii' [-Wunused-variable] int i,inc,ii,nra,nr,tp,ftype; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite2': ../../../src/mdlib/vsite.c:655:11: warning: unused variable 'b' [-Wunused-variable] real b; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite3FD': ../../../src/mdlib/vsite.c:770:23: warning: unused variable 'd' [-Wunused-variable] int svi,sji,skj,d; ^ ../../../src/mdlib/vsite.c:767:14: warning: unused variable 'fz' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c:767:11: warning: unused variable 'fy' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c:767:8: warning: unused variable 'fx' [-Wunused-variable] real fx,fy,fz,c,invl,fproj,a1; ^ ../../../src/mdlib/vsite.c: In function 'spread_vsite_f': ../../../src/mdlib/vsite.c:1255:19: warning: unused variable 'm' [-Wunused-variable] int i,inc,m,nra,nr,tp,ftype; ^ ../../../src/mdlib/vsite.c: In function 'count_intercg_vsite': ../../../src/mdlib/vsite.c:1409:11: warning: unused variable 'mt' [-Wunused-variable] int mb,mt,ftype,nral,i,cg,a; ^ ../../../src/mdlib/vsite.c: In function 'get_vsite_pbc': ../../../src/mdlib/vsite.c:1448:38: warning: unused variable 'cg_c' [-Wunused-variable] int ftype,nral,i,j,vsi,vsite,cg_v,cg_c,a,nc3=0; ^ ../../../src/mdlib/vsite.c: In function 'init_vsite': ../../../src/mdlib/vsite.c:1559:13: warning: unused variable 'cg' [-Wunused-variable] int *a2cg,cg; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/vsite.c:46: ../../../src/mdlib/vsite.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/vsite.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wnblist.lo ../../../src/mdlib/wnblist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/wall.c -fPIC -DPIC -o .libs/wall.o ../../../src/mdlib/wall.c: In function 'do_walls': ../../../src/mdlib/wall.c:107:47: warning: unused variable 'Heps' [-Wunused-variable] real tabscale,*VFtab,rt,eps,eps2,Yt,Ft,Geps,Heps,Heps2,Fp,VV,FF; ^ ../../../src/mdlib/wall.c:103:50: warning: variable 'Fwall' set but not used [-Wunused-but-set-variable] real *nbfp,lamfac,fac_d[2],fac_r[2],Cd,Cr,Vtot,Fwall[2]; ^ In file included from ../../../src/mdlib/wall.c:45:0: ../../../src/mdlib/wall.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/wall.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/wall.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o csettle.lo ../../../src/mdlib/csettle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/wnblist.c -fPIC -DPIC -o .libs/wnblist.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o clincs.lo ../../../src/mdlib/clincs.c ../../../src/mdlib/wnblist.c: In function 'read_nblist': ../../../src/mdlib/wnblist.c:135:27: warning: unused variable 'icmp' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:135:22: warning: unused variable 'full' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:135:17: warning: unused variable 'nnbl' [-Wunused-variable] int i,ii,j,nnbl,full,icmp,nri,isolv; ^ ../../../src/mdlib/wnblist.c:134:26: warning: unused variable 'b2' [-Wunused-variable] char buf[256],b1[32],b2[32],solv[256],il_code[256]; ^ ../../../src/mdlib/wnblist.c:134:19: warning: unused variable 'b1' [-Wunused-variable] char buf[256],b1[32],b2[32],solv[256],il_code[256]; ^ ../../../src/mdlib/wnblist.c:133:10: warning: unused variable 'bNL' [-Wunused-variable] bool bNL; ^ In file included from ../../../src/mdlib/wnblist.c:44:0: ../../../src/mdlib/wnblist.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o qmmm.lo ../../../src/mdlib/qmmm.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/csettle.c -fPIC -DPIC -o .libs/csettle.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/clincs.c -fPIC -DPIC -o .libs/clincs.o ../../../src/mdlib/csettle.c: In function 'xshake': ../../../src/mdlib/csettle.c:183:39: warning: unused variable 'conv' [-Wunused-variable] int i,ll,ii,jj,l3,ix,iy,iz,jx,jy,jz,conv; ^ ../../../src/mdlib/csettle.c: In function 'csettle': ../../../src/mdlib/csettle.c:298:10: warning: unused variable 'shakeret' [-Wunused-variable] int i, shakeret, ow1, hw2, hw3; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/csettle.c:42: ../../../src/mdlib/csettle.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/csettle.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/qmmm.c -fPIC -DPIC -o .libs/qmmm.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fft.lo ../../../src/mdlib/gmx_fft.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_parallel_3dfft.lo ../../../src/mdlib/gmx_parallel_3dfft.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wallcycle.lo ../../../src/mdlib/gmx_wallcycle.c ../../../src/mdlib/clincs.c: In function 'do_lincsp': ../../../src/mdlib/clincs.c:189:54: warning: unused variable 'lam' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:49: warning: unused variable 'wfac' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:45: warning: unused variable 'len' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ ../../../src/mdlib/clincs.c:189:40: warning: unused variable 'rlen' [-Wunused-variable] real tmp0,tmp1,tmp2,im1,im2,mvb,rlen,len,wfac,lam; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o qm_gaussian.lo ../../../src/mdlib/qm_gaussian.c ../../../src/mdlib/clincs.c: In function 'set_lincs': ../../../src/mdlib/clincs.c:764:14: warning: variable 'bLocal' set but not used [-Wunused-but-set-variable] bool bLocal; ^ ../../../src/mdlib/clincs.c: In function 'constrain_lincs': ../../../src/mdlib/clincs.c:1084:25: warning: unused variable 'error' [-Wunused-variable] int i,warn,p_imax,error; ^ In file included from ../../../src/mdlib/clincs.c:45:0: ../../../src/mdlib/clincs.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/clincs.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/clincs.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/mdlib/clincs.c:50: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ ../../../src/mdlib/clincs.c:1034:13: warning: 'dump_conf' defined but not used [-Wunused-function] static void dump_conf(gmx_domdec_t *dd,struct gmx_lincsdata *li, ^ ../../../src/mdlib/qmmm.c: In function 'update_QMMMrec': ../../../src/mdlib/qmmm.c:725:6: warning: unused variable 'MMatoms' [-Wunused-variable] *MMatoms; ^ ../../../src/mdlib/qmmm.c:721:17: warning: variable 'QMMMlist_lr' set but not used [-Wunused-but-set-variable] QMMMlist_sr,QMMMlist_lr; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/qmmm.c:48: ../../../src/mdlib/qmmm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/qmmm.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/qmmm.c:49:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/qmmm.c:60:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/mdlib/qmmm.c:131:12: warning: 'int_comp' defined but not used [-Wunused-function] static int int_comp(const void *a,const void *b){ ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_parallel_3dfft.c -fPIC -DPIC -o .libs/gmx_parallel_3dfft.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_fft.c -fPIC -DPIC -o .libs/gmx_fft.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_fft_fftw3.lo ../../../src/mdlib/gmx_fft_fftw3.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/qm_gaussian.c -fPIC -DPIC -o .libs/qm_gaussian.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_wallcycle.c -fPIC -DPIC -o .libs/gmx_wallcycle.o ../../../src/mdlib/gmx_parallel_3dfft.c: In function 'gmx_parallel_3dfft': ../../../src/mdlib/gmx_parallel_3dfft.c:283:22: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/mdlib/gmx_parallel_3dfft.c: In function 'gmx_parallel_3dfft_complex2real': ../../../src/mdlib/gmx_parallel_3dfft.c:484:18: warning: variable 'cdata' set but not used [-Wunused-but-set-variable] t_complex * cdata; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:483:18: warning: variable 'work' set but not used [-Wunused-but-set-variable] t_complex * work; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:480:24: warning: variable 'nzc' set but not used [-Wunused-but-set-variable] int nx,ny,nzc; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:480:21: warning: variable 'ny' set but not used [-Wunused-but-set-variable] int nx,ny,nzc; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:480:18: warning: variable 'nx' set but not used [-Wunused-but-set-variable] int nx,ny,nzc; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:479:22: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:479:20: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/mdlib/gmx_parallel_3dfft.c:479:18: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ In file included from ../../../include/gmx_parallel_3dfft.h:30:0, from ../../../src/mdlib/gmx_parallel_3dfft.c:32: ../../../src/mdlib/gmx_parallel_3dfft.c: At top level: In file included from ../../../src/mdlib/gmx_fft.c:30:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/mdlib -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/mdlib/gmx_fft_fftw3.c -fPIC -DPIC -o .libs/gmx_fft_fftw3.o ../../../src/mdlib/qm_gaussian.c: In function 'init_gaussian': ../../../src/mdlib/qm_gaussian.c:73:6: warning: unused variable 'rffile' [-Wunused-variable] *rffile=NULL,*out=NULL; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/mdlib/qm_gaussian.c:48: ../../../src/mdlib/qm_gaussian.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/mdlib/qm_gaussian.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/mdlib/qm_gaussian.c:49:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/mdlib/qm_gaussian.c:60:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/mdlib/gmx_fft_fftw3.c:27: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libmd_mpi_d.la -rpath /usr/lib64 calcmu.lo calcvir.lo constr.lo coupling.lo domdec.lo domdec_con.lo domdec_network.lo domdec_setup.lo domdec_top.lo ebin.lo edsam.lo ewald.lo fftgrid.lo force.lo ghat.lo init.lo mdatom.lo mdebin.lo minimize.lo mvxvf.lo ns.lo nsgrid.lo perf_est.lo pme.lo pme_pp.lo pppm.lo partdec.lo pull.lo pullutil.lo rf_util.lo shakef.lo sim_util.lo shellfc.lo stat.lo tables.lo tgroup.lo update.lo vcm.lo vsite.lo wall.lo wnblist.lo csettle.lo clincs.lo qmmm.lo gmx_fft.lo gmx_parallel_3dfft.lo gmx_wallcycle.lo qm_gaussian.lo gmx_fft_fftw3.lo ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath mpicc -shared .libs/calcmu.o .libs/calcvir.o .libs/constr.o .libs/coupling.o .libs/domdec.o .libs/domdec_con.o .libs/domdec_network.o .libs/domdec_setup.o .libs/domdec_top.o .libs/ebin.o .libs/edsam.o .libs/ewald.o .libs/fftgrid.o .libs/force.o .libs/ghat.o .libs/init.o .libs/mdatom.o .libs/mdebin.o .libs/minimize.o .libs/mvxvf.o .libs/ns.o .libs/nsgrid.o .libs/perf_est.o .libs/pme.o .libs/pme_pp.o .libs/pppm.o .libs/partdec.o .libs/pull.o .libs/pullutil.o .libs/rf_util.o .libs/shakef.o .libs/sim_util.o .libs/shellfc.o .libs/stat.o .libs/tables.o .libs/tgroup.o .libs/update.o .libs/vcm.o .libs/vsite.o .libs/wall.o .libs/wnblist.o .libs/csettle.o .libs/clincs.o .libs/qmmm.o .libs/gmx_fft.o .libs/gmx_parallel_3dfft.o .libs/gmx_wallcycle.o .libs/qm_gaussian.o .libs/gmx_fft_fftw3.o -lgslcblas ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libmd_mpi_d.so.5 -o .libs/libmd_mpi_d.so.5.0.0 (cd .libs && rm -f libmd_mpi_d.so.5 && ln -s libmd_mpi_d.so.5.0.0 libmd_mpi_d.so.5) (cd .libs && rm -f libmd_mpi_d.so && ln -s libmd_mpi_d.so.5.0.0 libmd_mpi_d.so) creating libmd_mpi_d.la (cd .libs && rm -f libmd_mpi_d.la && ln -s ../libmd_mpi_d.la libmd_mpi_d.la) make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib' Making all in kernel make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/kernel' /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o add_par.lo ../../../src/kernel/add_par.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o compute_io.lo ../../../src/kernel/compute_io.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o convparm.lo ../../../src/kernel/convparm.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gen_ad.lo ../../../src/kernel/gen_ad.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gen_vsite.lo ../../../src/kernel/gen_vsite.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genhydro.lo ../../../src/kernel/genhydro.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxcpp.lo ../../../src/kernel/gmxcpp.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gpp_atomtype.lo ../../../src/kernel/gpp_atomtype.c mkdir .libs mkdir .libs mkdir .libs mkdir: cannot create directory '.libs': File exists mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/convparm.c -fPIC -DPIC -o .libs/convparm.o mkdir: cannot create directory '.libs': File exists mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gen_ad.c -fPIC -DPIC -o .libs/gen_ad.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/compute_io.c -fPIC -DPIC -o .libs/compute_io.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/add_par.c -fPIC -DPIC -o .libs/add_par.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gen_vsite.c -fPIC -DPIC -o .libs/gen_vsite.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/genhydro.c -fPIC -DPIC -o .libs/genhydro.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gpp_atomtype.c -fPIC -DPIC -o .libs/gpp_atomtype.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gmxcpp.c -fPIC -DPIC -o .libs/gmxcpp.o In file included from ../../../src/kernel/add_par.c:44:0: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/add_par.c:46: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/convparm.c: In function 'new_interaction_list': ../../../src/kernel/convparm.c:404:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/convparm.c: In function 'convert_params': ../../../src/kernel/convparm.c:414:12: warning: unused variable 'j' [-Wunused-variable] int i,j,maxtypes,mt; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/convparm.c:44: ../../../src/kernel/convparm.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/convparm.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/convparm.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/convparm.c:48: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/convparm.c:48: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/convparm.c:402:13: warning: 'new_interaction_list' defined but not used [-Wunused-function] static void new_interaction_list(t_ilist *ilist) ^ ../../../src/kernel/gen_vsite.c: In function 'read_vsite_database': ../../../src/kernel/gen_vsite.c:150:34: warning: unused variable 'prevdir' [-Wunused-variable] int i,j,n,k,nvsite,ntop,curdir,prevdir; ^ ../../../src/kernel/gen_vsite.c:150:9: warning: unused variable 'j' [-Wunused-variable] int i,j,n,k,nvsite,ntop,curdir,prevdir; ^ ../../../src/kernel/gen_vsite.c: In function 'add_vsites': ../../../src/kernel/gen_vsite.c:477:33: warning: unused variable 'bb' [-Wunused-variable] int i,j,ftype,other,moreheavy,bb; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_6ring': ../../../src/kernel/gen_vsite.c:560:32: warning: variable 'yCE2' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:27: warning: variable 'xCE2' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:22: warning: variable 'yCE1' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:17: warning: variable 'xCE1' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c:560:13: warning: variable 'yCG' set but not used [-Wunused-but-set-variable] real xCG,yCG,xCE1,yCE1,xCE2,yCE2; ^ ../../../src/kernel/gen_vsite.c: In function 'calc_vsite3_param': ../../../src/kernel/gen_vsite.c:693:13: warning: variable 'b_ik' set but not used [-Wunused-but-set-variable] real b_ij,b_ik; ^ ../../../src/kernel/gen_vsite.c:693:8: warning: variable 'b_ij' set but not used [-Wunused-but-set-variable] real b_ij,b_ik; ^ ../../../src/kernel/gmxcpp.c: In function 'cpp_close_file': ../../../src/kernel/gmxcpp.c:453:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_trp': ../../../src/kernel/gen_vsite.c:741:12: warning: unused variable 'c' [-Wunused-variable] real a,b,c[MAXFORCEPARAM]; ^ ../../../src/kernel/gen_vsite.c:740:14: warning: unused variable 'mtot' [-Wunused-variable] real mwtot,mtot,mM[NMASS],dCBM1,dCBM2,dM1M2; ^ ../../../src/kernel/gen_vsite.c:740:8: warning: unused variable 'mwtot' [-Wunused-variable] real mwtot,mtot,mM[NMASS],dCBM1,dCBM2,dM1M2; ^ ../../../src/kernel/gen_vsite.c:738:8: warning: unused variable 'xM' [-Wunused-variable] real xM[NMASS]; ^ ../../../src/kernel/gen_vsite.c:735:8: warning: variable 'a_CB_CG_CD1' set but not used [-Wunused-but-set-variable] real a_CB_CG_CD1,a_CD2_CG_CD1,a_CE2_CZ2_HZ2,a_CZ2_CH2_HH2; ^ ../../../src/kernel/gen_vsite.c:729:20: warning: unused variable 'dist' [-Wunused-variable] real lineA,lineB,dist; ^ ../../../src/kernel/gen_vsite.c:729:14: warning: variable 'lineB' set but not used [-Wunused-but-set-variable] real lineA,lineB,dist; ^ ../../../src/kernel/gen_vsite.c:728:32: warning: unused variable 'I' [-Wunused-variable] real xcom[NMASS],ycom[NMASS],I,alpha; ^ ../../../src/kernel/gen_vsite.c: In function 'gen_vsites_tyr': ../../../src/kernel/gen_vsite.c:968:8: warning: unused variable 'vmass' [-Wunused-variable] real vmass,vdist,mM; ^ In file included from ../../../src/kernel/topdirs.h:40:0, from ../../../src/kernel/gpp_atomtype.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/gen_vsite.c: In function 'do_vsites': ../../../src/kernel/gen_vsite.c:1332:29: warning: unused variable 'bb' [-Wunused-variable] int Hatoms[4],heavies[4],bb; ^ In file included from ../../../src/kernel/gen_vsite.h:41:0, from ../../../src/kernel/gen_vsite.c:44: ../../../src/kernel/gen_vsite.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/gen_vsite.h:43, from ../../../src/kernel/gen_vsite.c:44: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gpp_bond_atomtype.lo ../../../src/kernel/gpp_bond_atomtype.c In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gen_vsite.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gen_vsite.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/compute_io.c: In function 'compute_io': ../../../src/kernel/compute_io.c:49:53: warning: unused variable 'nfep' [-Wunused-variable] int nstx=0,nstv=0,nstf=0,nste=0,nstlog=0,nstxtc=0,nfep=0; ^ ../../../src/kernel/gen_ad.c: In function 'get_impropers': ../../../src/kernel/gen_ad.c:437:25: warning: unused variable 'r' [-Wunused-variable] int nidih,i,j,k,r,start,ninc,nalloc; ^ ../../../src/kernel/gen_ad.c:436:15: warning: unused variable 'hbidih' [-Wunused-variable] t_rbonded *hbidih; ^ ../../../src/kernel/gen_ad.c:434:14: warning: unused variable 'a0' [-Wunused-variable] char *a0; ^ ../../../src/kernel/gen_ad.c: In function 'clean_excls': ../../../src/kernel/gen_ad.c:576:26: warning: unused variable 'n' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e; ^ ../../../src/kernel/gen_ad.c:576:24: warning: unused variable 'm' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e; ^ ../../../src/kernel/gen_ad.c: In function 'generate_excls': ../../../src/kernel/gen_ad.c:618:28: warning: unused variable 'e' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:24: warning: unused variable 'm' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:21: warning: unused variable 'l1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:19: warning: unused variable 'l' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:16: warning: unused variable 'k1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:14: warning: unused variable 'k' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ ../../../src/kernel/gen_ad.c:618:11: warning: unused variable 'j1' [-Wunused-variable] int i,j,j1,k,k1,l,l1,m,n,e,N; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gen_ad.c:48: ../../../src/kernel/gen_ad.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gen_ad.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/gen_ad.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/gen_ad.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/gen_ad.c:51: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/gen_ad.c:57: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/kernel/gen_ad.c:114:13: warning: 'aeq' defined but not used [-Wunused-function] static bool aeq(t_param *p1, t_param *p2) ^ ../../../src/kernel/gen_ad.c:289:13: warning: 'ideq' defined but not used [-Wunused-function] static bool ideq(t_param *p1, t_param *p2) ^ ../../../src/kernel/gen_ad.c:327:13: warning: 'dump_param' defined but not used [-Wunused-function] static void dump_param(FILE *fp,char *title,int n,t_param ps[]) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o h_db.lo ../../../src/kernel/h_db.c In file included from ../../../src/kernel/genhydro.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/genhydro.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/genhydro.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/genhydro.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/genhydro.h:40:0, from ../../../src/kernel/genhydro.c:56: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/genhydro.h:41, from ../../../src/kernel/genhydro.c:56: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/gpp_bond_atomtype.c -fPIC -DPIC -o .libs/gpp_bond_atomtype.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hackblock.lo ../../../src/kernel/hackblock.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hizzie.lo ../../../src/kernel/hizzie.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdb2top.lo ../../../src/kernel/pdb2top.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/h_db.c -fPIC -DPIC -o .libs/h_db.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pgutil.lo ../../../src/kernel/pgutil.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/hackblock.c -fPIC -DPIC -o .libs/hackblock.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/hizzie.c -fPIC -DPIC -o .libs/hizzie.o ../../../src/kernel/h_db.c: In function 'dump_h_db': mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/pdb2top.c -fPIC -DPIC -o .libs/pdb2top.o ../../../src/kernel/h_db.c:113:10: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/h_db.h:41, from ../../../src/kernel/h_db.c:47: ../../../src/kernel/h_db.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/h_db.h:41, from ../../../src/kernel/h_db.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/pgutil.c -fPIC -DPIC -o .libs/pgutil.o ../../../src/kernel/hizzie.c: In function 'set_histp': ../../../src/kernel/hizzie.c:195:8: warning: unused variable 'd' [-Wunused-variable] real d; ^ ../../../src/kernel/hizzie.c:192:27: warning: unused variable 'his0' [-Wunused-variable] int i,j,nd,na,aj,hisnr,his0,type=-1; ^ ../../../src/kernel/hizzie.c:192:18: warning: unused variable 'aj' [-Wunused-variable] int i,j,nd,na,aj,hisnr,his0,type=-1; ^ ../../../src/kernel/hizzie.c:188:15: warning: unused variable 'bHaveH' [-Wunused-variable] bool *hbond,bHaveH=FALSE; ^ In file included from ../../../src/kernel/hizzie.c:44:0: ../../../src/kernel/hizzie.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/hizzie.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/hizzie.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/hizzie.c:48: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/hackblock.c:42: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/hackblock.c:42: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/hackblock.c:44: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/hackblock.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/pdb2top.c: In function 'missing_atoms': ../../../src/kernel/pdb2top.c:75:16: warning: unused variable 'bRet' [-Wunused-variable] bool bFound, bRet; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readir.lo ../../../src/kernel/readir.c In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/pdb2top.c:43: ../../../src/kernel/pdb2top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/pdb2top.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/pdb2top.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/kernel/pdb2top.h:41:0, from ../../../src/kernel/pdb2top.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/pdb2top.c:50: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/pdb2top.c:57: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/pdb2top.c:57: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o readpull.lo ../../../src/kernel/readpull.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o resall.lo ../../../src/kernel/resall.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/readir.c -fPIC -DPIC -o .libs/readir.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sorting.lo ../../../src/kernel/sorting.c ../../../src/kernel/readir.c: In function 'do_index': ../../../src/kernel/readir.c:1427:38: warning: variable 'nbTS' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:32: warning: variable 'nbOPT' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:18: warning: variable 'nSAsteps' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:11: warning: variable 'nSAoff' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1427:5: warning: variable 'nSAon' set but not used [-Wunused-but-set-variable] nSAon,nSAoff,nSAsteps,nQMg,nbOPT,nbTS; ^ ../../../src/kernel/readir.c:1426:61: warning: variable 'nCASelec' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:53: warning: variable 'nCASorb' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:48: warning: variable 'nbSH' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:40: warning: variable 'nQMmult' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1426:30: warning: variable 'nQMcharge' set but not used [-Wunused-but-set-variable] int nQMmethod,nQMbasis,nQMcharge,nQMmult,nbSH,nCASorb,nCASelec, ^ ../../../src/kernel/readir.c:1424:11: warning: unused variable 'SAtime' [-Wunused-variable] real SAtime; ^ ../../../src/kernel/readir.c: In function 'triple_check': ../../../src/kernel/readir.c:1872:17: warning: unused variable 'npct' [-Wunused-variable] int i,m,nmol,npct; ^ In file included from ../../../src/kernel/readir.c:53:0: ../../../src/kernel/readir.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/readir.c:54: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/readir.c:58: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/readir.c:58:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/readpull.c -fPIC -DPIC -o .libs/readpull.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/sorting.c -fPIC -DPIC -o .libs/sorting.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/resall.c -fPIC -DPIC -o .libs/resall.o In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/resall.c:49: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/resall.c:49: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/readpull.c: In function 'read_pullparams': ../../../src/kernel/readpull.c:102:22: warning: unused variable 'nchar' [-Wunused-variable] int ninp,nerror,i,nchar,ndim,nscan,m; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/readpull.c:45: ../../../src/kernel/readpull.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/readpull.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/readpull.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/readpull.c:54: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readpull.c:54:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o specbond.lo ../../../src/kernel/specbond.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ter_db.lo ../../../src/kernel/ter_db.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tomorse.lo ../../../src/kernel/tomorse.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/specbond.c -fPIC -DPIC -o .libs/specbond.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/ter_db.c -fPIC -DPIC -o .libs/ter_db.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/tomorse.c -fPIC -DPIC -o .libs/tomorse.o In file included from ../../../src/kernel/specbond.c:43:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/pdb2top.h:41:0, from ../../../src/kernel/specbond.h:40, from ../../../src/kernel/specbond.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/specbond.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/specbond.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topdirs.lo ../../../src/kernel/topdirs.c In file included from ../../../src/kernel/tomorse.c:46:0: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/ter_db.c: In function 'print_ter_db': ../../../src/kernel/ter_db.c:105:20: warning: unused variable 'nname' [-Wunused-variable] char buf[STRLEN],nname[STRLEN]; ^ ../../../src/kernel/ter_db.c: In function 'filter_ter': ../../../src/kernel/ter_db.c:301:12: warning: unused variable 's2' [-Wunused-variable] char *s,*s2,*c; ^ ../../../src/kernel/ter_db.c:299:13: warning: unused variable 'len' [-Wunused-variable] int i,j,n,len,none_idx; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topexcl.lo ../../../src/kernel/topexcl.c In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/ter_db.c:45: ../../../src/kernel/ter_db.c: At top level: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/ter_db.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topdirs.c -fPIC -DPIC -o .libs/topdirs.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topio.lo ../../../src/kernel/topio.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o toppush.lo ../../../src/kernel/toppush.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o topshake.lo ../../../src/kernel/topshake.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topexcl.c -fPIC -DPIC -o .libs/topexcl.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topio.c -fPIC -DPIC -o .libs/topio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/toppush.c -fPIC -DPIC -o .libs/toppush.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o toputil.lo ../../../src/kernel/toputil.c In file included from ../../../include/gpp_nextnb.h:40:0, from ../../../src/kernel/topexcl.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/topio.c: In function 'read_topol': ../../../src/kernel/topio.c:314:15: warning: unused variable 'block' [-Wunused-variable] t_topology *block=NULL; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpbcmp.lo ../../../src/kernel/tpbcmp.c In file included from ../../../src/kernel/vsite_parm.h:41:0, from ../../../src/kernel/topio.c:59: ../../../src/kernel/topio.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topio.h:41, from ../../../src/kernel/topio.c:66: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/topio.c:66: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/topshake.c -fPIC -DPIC -o .libs/topshake.o ../../../src/kernel/topshake.c: In function 'make_shake': ../../../src/kernel/topshake.c:98:19: warning: unused variable 'b' [-Wunused-variable] int nb,b,i,j,ftype,ftype_a; ^ ../../../src/kernel/topshake.c:98:16: warning: unused variable 'nb' [-Wunused-variable] int nb,b,i,j,ftype,ftype_a; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/topshake.c:46: ../../../src/kernel/topshake.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/topshake.c:46: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/topshake.c:46:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/toppush.c: In function 'push_bt': ../../../src/kernel/toppush.c:573:37: warning: variable 'nrfpB' set but not used [-Wunused-but-set-variable] int i,ft,ftype,nn,nrfp,nrfpA,nrfpB; ^ ../../../src/kernel/toppush.c: In function 'push_dihedraltype': ../../../src/kernel/toppush.c:661:37: warning: variable 'nrfpB' set but not used [-Wunused-but-set-variable] int i,ft,ftype,nn,nrfp,nrfpA,nrfpB,nral; ^ ../../../src/kernel/toppush.c: In function 'push_nbt': ../../../src/kernel/toppush.c:778:17: warning: unused variable 'sig6' [-Wunused-variable] real cr[4],sig6; ^ ../../../src/kernel/toppush.c:776:23: warning: unused variable 'atnr' [-Wunused-variable] int i,f,n,ftype,atnr,nrfp; ^ ../../../src/kernel/toppush.c: In function 'push_atom_now': ../../../src/kernel/toppush.c:871:7: warning: unused variable 'j' [-Wunused-variable] int j,resnr_diff=-1; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o vsite_parm.lo ../../../src/kernel/vsite_parm.c ../../../src/kernel/toppush.c: In function 'push_bond': ../../../src/kernel/toppush.c:1234:18: warning: unused variable 'paramB' [-Wunused-variable] t_param param,paramB,*param_defA,*param_defB; ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.c:48: ../../../src/kernel/toppush.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/toppush.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/toppush.c:51:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/tpbcmp.c -fPIC -DPIC -o .libs/tpbcmp.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/toputil.c -fPIC -DPIC -o .libs/toputil.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xlate.lo ../../../src/kernel/xlate.c ../../../src/kernel/tpbcmp.c: In function 'cmp_block': ../../../src/kernel/tpbcmp.c:242:11: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:242:9: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:242:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_blocka': ../../../src/kernel/tpbcmp.c:252:11: warning: unused variable 'k' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:252:9: warning: unused variable 'j' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c:252:7: warning: unused variable 'i' [-Wunused-variable] int i,j,k; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_atom': ../../../src/kernel/tpbcmp.c:265:8: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ ../../../src/kernel/tpbcmp.c:264:8: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/tpbcmp.c: In function 'cmp_top': ../../../src/kernel/tpbcmp.c:302:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../src/kernel/tpbcmp.c: In function 'comp_tpx': ../../../src/kernel/tpbcmp.c:567:15: warning: unused variable 'sh' [-Wunused-variable] t_tpxheader sh[2]; ^ ../../../src/kernel/tpbcmp.c: In function 'comp_enx': ../../../src/kernel/tpbcmp.c:723:38: warning: unused variable 'buf' [-Wunused-variable] char **enm1=NULL,**enm2=NULL,buf[256]; ^ ../../../src/kernel/tpbcmp.c:721:36: warning: unused variable 'block' [-Wunused-variable] int in1,in2,nre,nre1,nre2,block; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/tpbcmp.c:48: ../../../src/kernel/tpbcmp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/tpbcmp.c:77:13: warning: 'cmp_uc' defined but not used [-Wunused-function] static void cmp_uc(FILE *fp,char *s,int index,unsigned char i1,unsigned char i2) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/vsite_parm.c -fPIC -DPIC -o .libs/vsite_parm.o In file included from ../../../src/kernel/topdirs.h:40:0, from ../../../src/kernel/toputil.c:45: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/toputil.c:135:13: warning: 'print_nbt' defined but not used [-Wunused-function] static void print_nbt (FILE *out,char *title,t_atomtype at, ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o grompp.o ../../../src/kernel/grompp.c ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_bonds': ../../../src/kernel/vsite_parm.c:862:62: warning: unused variable 'vsitetype' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:862:30: warning: unused variable 'l' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:862:22: warning: unused variable 'parnr' [-Wunused-variable] int ftype,i,j,parnr,k,l,m,n,nvsite,nOut,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_angles': ../../../src/kernel/vsite_parm.c:1035:51: warning: unused variable 'vsitetype' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:1035:24: warning: unused variable 'l' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c:1035:16: warning: unused variable 'parnr' [-Wunused-variable] int i,j,parnr,k,l,m,n,nvsite,kept_i,vsnral,vsitetype; ^ ../../../src/kernel/vsite_parm.c: In function 'clean_vsite_dihs': ../../../src/kernel/vsite_parm.c:1130:28: warning: unused variable 'l' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ ../../../src/kernel/vsite_parm.c:1130:20: warning: unused variable 'parnr' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ ../../../src/kernel/vsite_parm.c:1130:12: warning: unused variable 'ftype' [-Wunused-variable] int ftype,i,parnr,k,l,m,n,nvsite,kept_i,vsnral; ^ In file included from ../../../src/kernel/vsite_parm.h:41:0, from ../../../src/kernel/vsite_parm.c:43: ../../../src/kernel/vsite_parm.c: At top level: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/resall.h:41, from ../../../src/kernel/vsite_parm.c:45: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/vsite_parm.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/vsite_parm.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o glaasje.o ../../../src/kernel/glaasje.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/kernel/xlate.c -fPIC -DPIC -o .libs/xlate.o ../../../src/kernel/glaasje.c: In function 'do_glas': ../../../src/kernel/glaasje.c:55:40: warning: unused variable 'r3' [-Wunused-variable] real wd,wdd,zi,fz,dd,d10,d4,d9,d3,r9,r3,sign,cc6,cc12; ^ ../../../src/kernel/glaasje.c:55:37: warning: unused variable 'r9' [-Wunused-variable] real wd,wdd,zi,fz,dd,d10,d4,d9,d3,r9,r3,sign,cc6,cc12; ^ In file included from ../../../src/kernel/glaasje.c:44:0: ../../../src/kernel/glaasje.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gctio.o ../../../src/kernel/gctio.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ionize.o ../../../src/kernel/ionize.c In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/gctio.c:41: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/kernel/gctio.c:49:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/ionize.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/ionize.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/grompp.c: In function 'new_status': ../../../src/kernel/grompp.c:300:3: warning: statement with no effect [-Wunused-value] mbs; ^ ../../../src/kernel/grompp.c: In function 'read_posres': ../../../src/kernel/grompp.c:478:10: warning: unused variable 'bFirst' [-Wunused-variable] bool bFirst = TRUE; ^ ../../../src/kernel/grompp.c: In function 'gen_posres': ../../../src/kernel/grompp.c:604:9: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/kernel/grompp.c:604:7: warning: unused variable 'i' [-Wunused-variable] int i,j; ^ ../../../src/kernel/grompp.c: In function 'main': ../../../src/kernel/grompp.c:769:16: warning: unused variable 'natoms' [-Wunused-variable] int natoms,nvsite,comb,mt; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/grompp.c:50: ../../../src/kernel/grompp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/grompp.c:50: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/grompp.c:50:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/grompp.c:54:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/grompp.c:60: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/grompp.c:60:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/add_par.h:41, from ../../../src/kernel/grompp.c:74: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_gct.o ../../../src/kernel/do_gct.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o repl_ex.o ../../../src/kernel/repl_ex.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xutils.o ../../../src/kernel/xutils.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o md.o ../../../src/kernel/md.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mdrun.o ../../../src/kernel/mdrun.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genalg.o ../../../src/kernel/genalg.c ../../../src/kernel/xutils.c: In function 'calc_mu_aver': ../../../src/kernel/xutils.c:65:19: warning: variable 'end' set but not used [-Wunused-but-set-variable] int i,start,end; ^ ../../../src/kernel/xutils.c: In function 'update_forcefield': ../../../src/kernel/xutils.c:335:10: warning: unused variable 'bDone' [-Wunused-variable] bool bDone; ^ In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/xutils.c:44: ../../../src/kernel/xutils.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/xutils.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/xutils.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/repl_ex.c: In function 'init_replica_exchange': ../../../src/kernel/repl_ex.c:111:8: warning: unused variable 'temp' [-Wunused-variable] real temp,pres; ^ ../../../src/kernel/repl_ex.c: In function 'replica_exchange': ../../../src/kernel/md.c: In function 'mdrunner': ../../../src/kernel/md.c:140:15: warning: unused variable 'gro' [-Wunused-variable] char *gro; ^ ../../../src/kernel/repl_ex.c:560:20: warning: unused variable 'shift' [-Wunused-variable] int exchange=-1,shift; ^ In file included from ../../../src/kernel/repl_ex.c:46:0: ../../../src/kernel/repl_ex.c: At top level: ../../../src/kernel/md.c:139:45: warning: unused variable 'nalloc' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:139:16: warning: unused variable 'm' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:139:14: warning: unused variable 'i' [-Wunused-variable] int i,m,nChargePerturbed=-1,status,nalloc; ^ ../../../src/kernel/md.c:128:20: warning: unused variable 'tmpr2' [-Wunused-variable] real tmpr1,tmpr2; ^ ../../../src/kernel/md.c:128:14: warning: unused variable 'tmpr1' [-Wunused-variable] real tmpr1,tmpr2; ^ ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/repl_ex.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/repl_ex.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/repl_ex.c:544:13: warning: 'write_debug_x' defined but not used [-Wunused-function] static void write_debug_x(t_state *state) ^ ../../../src/kernel/do_gct.c: In function 'init_coupling': ../../../src/kernel/do_gct.c:63:19: warning: unused variable 'atj' [-Wunused-variable] int ati,atj; ^ ../../../src/kernel/do_gct.c:63:15: warning: unused variable 'ati' [-Wunused-variable] int ati,atj; ^ ../../../src/kernel/do_gct.c:62:26: warning: unused variable 'j' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:20: warning: unused variable 'index' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:17: warning: unused variable 'nc' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/do_gct.c:62:15: warning: unused variable 'i' [-Wunused-variable] int i,nc,index,j; ^ ../../../src/kernel/md.c: In function 'do_md': ../../../src/kernel/md.c:533:16: warning: unused variable 'grpname' [-Wunused-variable] char *grpname; ^ ../../../src/kernel/md.c:525:15: warning: unused variable 'timestep' [-Wunused-variable] real timestep=0; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/md.c:45: ../../../src/kernel/md.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/md.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/md.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/pppm.h:46:0, from ../../../src/kernel/md.c:69: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/kernel/do_gct.c: In function 'do_coupling': ../../../src/kernel/do_gct.c:489:15: warning: unused variable 'bTest' [-Wunused-variable] bool bTest,bPrint; ^ ../../../src/kernel/do_gct.c:487:59: warning: unused variable 'xi12' [-Wunused-variable] real Epol,Eintern,Virial,muabs,xiH=-1,xiS=-1,xi6,xi12; ^ ../../../src/kernel/do_gct.c:487:55: warning: unused variable 'xi6' [-Wunused-variable] real Epol,Eintern,Virial,muabs,xiH=-1,xiS=-1,xi6,xi12; ^ ../../../src/kernel/do_gct.c:486:32: warning: unused variable 'ffc' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:486:28: warning: unused variable 'ffb' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:486:24: warning: unused variable 'ffa' [-Wunused-variable] real ff6,ff12,ffa,ffb,ffc,ffq,factor,dt,mu_ind; ^ ../../../src/kernel/do_gct.c:485:60: warning: unused variable 'rmsf' [-Wunused-variable] real deviation[eoObsNR],prdev[eoObsNR],epot0,dist,rmsf; ^ In file included from ../../../src/kernel/xmdrun.h:50:0, from ../../../src/kernel/do_gct.c:41: ../../../src/kernel/do_gct.c: At top level: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/kernel/do_gct.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/kernel/do_gct.c:48: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/do_gct.c:50:0: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/kernel/do_gct.c:457:13: warning: 'dump_fm' defined but not used [-Wunused-function] static void dump_fm(FILE *fp,int n,real f[],char *s) ^ ../../../src/kernel/genalg.c: In function 'update_ga': ../../../src/kernel/genalg.c:197:12: warning: unused variable 'j' [-Wunused-variable] int i, j, L, n; /* counting variables */ ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/genalg.c:75: ../../../src/kernel/genalg.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/genalg.c:75:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/mdrun.c: In function 'main': ../../../src/kernel/mdrun.c:387:20: warning: unused variable 'fptest' [-Wunused-variable] FILE *fplog,*fptest; ^ ../../../src/kernel/mdrun.c:386:12: warning: unused variable 'HaveCheckpoint' [-Wunused-variable] bool HaveCheckpoint; ^ ../../../src/kernel/mdrun.c:285:15: warning: unused variable 'bPPPME' [-Wunused-variable] static bool bPPPME = FALSE; ^ ../../../src/kernel/mdrun.c:284:15: warning: unused variable 'bCart' [-Wunused-variable] static bool bCart = FALSE; ^ In file included from ../../../src/kernel/mdrun.c:42:0: ../../../src/kernel/mdrun.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/mdrun.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/mdrun.h:50:0, from ../../../src/kernel/mdrun.c:49: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/vec.h:121:0, from ../../../include/pull.h:44, from ../../../include/mdrun.h:56, from ../../../src/kernel/mdrun.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../include/pull.h:44:0, from ../../../include/mdrun.h:56, from ../../../src/kernel/mdrun.c:49: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o tpbconv.o ../../../src/kernel/tpbconv.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pdb2gmx.o ../../../src/kernel/pdb2gmx.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o protonate.o ../../../src/kernel/protonate.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o luck.o ../../../src/kernel/luck.c In file included from ../../../src/kernel/luck.c:41:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/luck.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/protonate.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/protonate.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/genhydro.h:40:0, from ../../../src/kernel/protonate.c:47: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/hackblock.h:42:0, from ../../../src/kernel/genhydro.h:41, from ../../../src/kernel/protonate.c:47: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/protonate.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/protonate.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/kernel/tpbconv.c: In function 'main': ../../../src/kernel/tpbconv.c:365:7: warning: unused variable 'nerror' [-Wunused-variable] int nerror = 0; ^ ../../../src/kernel/tpbconv.c:325:17: warning: unused variable 'gopts' [-Wunused-variable] t_gromppopts *gopts; ^ ../../../src/kernel/tpbconv.c:324:21: warning: unused variable 'irnew' [-Wunused-variable] t_inputrec *ir,*irnew=NULL; ^ ../../../src/kernel/tpbconv.c:318:33: warning: unused variable 'nsteps_org' [-Wunused-variable] int i,frame,run_step,nsteps_org; ^ In file included from ../../../src/kernel/readir.h:42:0, from ../../../src/kernel/tpbconv.c:52: ../../../src/kernel/tpbconv.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/readir.h:43:0, from ../../../src/kernel/tpbconv.c:52: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/tpbconv.c:52:0: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ In file included from ../../../src/kernel/tpbconv.c:54:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/tpbconv.c:56: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/tpbconv.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxdump.o ../../../src/kernel/gmxdump.c In file included from ../../../src/kernel/pdb2gmx.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/pdb2gmx.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/pdb2gmx.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/pdb2gmx.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/pdb2gmx.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/pdb2gmx.c:55: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ ../../../src/kernel/pdb2gmx.c:149:20: warning: 'get_cystp' defined but not used [-Wunused-function] static const char *get_cystp(int resnr) ^ ../../../src/kernel/gmxdump.c: In function 'list_tpx': ../../../src/kernel/gmxdump.c:146:16: warning: left-hand operand of comma expression has no effect [-Wunused-value] if (state,tpx.bF) { ^ ../../../src/kernel/gmxdump.c:99:20: warning: unused variable 'fp' [-Wunused-variable] int step,fp,indent,i,j,**gcount,atot; ^ ../../../src/kernel/gmxdump.c: In function 'list_ene': ../../../src/kernel/gmxdump.c:314:17: warning: unused variable 'ndr' [-Wunused-variable] int in,ndr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/gmxdump.c:46: ../../../src/kernel/gmxdump.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/gmxdump.c:47:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/kernel/gmxdump.c:65:13: warning: 'dump_top' defined but not used [-Wunused-function] static void dump_top(FILE *fp,t_topology *top,char *tpr) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmxcheck.o ../../../src/kernel/gmxcheck.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o x2top.o ../../../src/kernel/x2top.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/kernel -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nm2type.o ../../../src/kernel/nm2type.c ../../../src/kernel/nm2type.c: In function 'rd_nm2type': ../../../src/kernel/nm2type.c:72:20: warning: unused variable 'blen' [-Wunused-variable] double qq,mm,*blen; ^ ../../../src/kernel/x2top.c: In function 'set_cgnr': ../../../src/kernel/nm2type.c: In function 'nm2type': ../../../src/kernel/nm2type.c:160:38: warning: unused variable 'quality' [-Wunused-variable] int *bbb,*n_mask,*m_mask,**match,**quality; ^ ../../../src/kernel/x2top.c:178:15: warning: unused variable 'mt' [-Wunused-variable] double qt=0,mt=0; ^ ../../../src/kernel/x2top.c: In function 'set_force_const': In file included from ../../../src/kernel/nm2type.c:42:0: ../../../src/kernel/nm2type.c: At top level: ../../../src/kernel/x2top.c:255:7: warning: unused variable 'i' [-Wunused-variable] int i; ^ ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/nm2type.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/nm2type.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/nm2type.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.h:41, from ../../../src/kernel/nm2type.c:58: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/nm2type.c:59: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o libgmxpreprocess_mpi_d.la add_par.lo compute_io.lo convparm.lo gen_ad.lo gen_vsite.lo genhydro.lo gmxcpp.lo gpp_atomtype.lo gpp_bond_atomtype.lo h_db.lo hackblock.lo hizzie.lo pdb2top.lo pgutil.lo readir.lo readpull.lo resall.lo sorting.lo specbond.lo ter_db.lo tomorse.lo topdirs.lo topexcl.lo topio.lo toppush.lo topshake.lo toputil.lo tpbcmp.lo vsite_parm.lo xlate.lo -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ../../../src/kernel/x2top.c: In function 'main': ../../../src/kernel/x2top.c:419:15: warning: unused variable 'scale' [-Wunused-variable] static real scale = 1.1, kb = 4e5,kt = 400,kp = 5; ^ ../../../src/kernel/x2top.c:411:14: warning: unused variable 'cutoff' [-Wunused-variable] real cutoff,qtot,mtot; ^ ../../../src/kernel/x2top.c:408:24: warning: unused variable 'ndih' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:22: warning: unused variable 'm' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:20: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:18: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:16: warning: unused variable 'j' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:408:14: warning: unused variable 'i' [-Wunused-variable] int i,j,k,l,m,ndih; ^ ../../../src/kernel/x2top.c:407:14: warning: unused variable 'nres' [-Wunused-variable] int nres; /* number of molecules? */ ^ In file included from ../../../src/kernel/x2top.c:40:0: ../../../src/kernel/x2top.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/x2top.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/x2top.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/x2top.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/kernel/toputil.h:40:0, from ../../../src/kernel/toppush.h:41, from ../../../src/kernel/x2top.c:58: ../../../include/grompp.h:141:14: warning: 'ds' defined but not used [-Wunused-variable] static char *ds[d_maxdir+1] = { ^ In file included from ../../../src/kernel/hackblock.h:41:0, from ../../../src/kernel/pdb2top.h:43, from ../../../src/kernel/x2top.c:59: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/kernel/topio.h:41:0, from ../../../src/kernel/gen_ad.h:42, from ../../../src/kernel/x2top.c:60: ../../../src/kernel/readir.h:47:20: warning: 'constraints' defined but not used [-Wunused-variable] static const char *constraints[eshNR+1] = { ^ ../../../src/kernel/readir.h:53:20: warning: 'couple_lam' defined but not used [-Wunused-variable] static const char *couple_lam[ecouplamNR+1] = { ^ ../../../src/kernel/x2top.c:80:13: warning: 'set_x_blen' defined but not used [-Wunused-function] static real set_x_blen(real scale) ^ ../../../src/kernel/x2top.c:117:12: warning: 'get_atype' defined but not used [-Wunused-function] static int get_atype(char *nm) ^ ../../../src/kernel/gmxcheck.c: In function 'tpx2system': ../../../src/kernel/gmxcheck.c:90:7: warning: unused variable 'i' [-Wunused-variable] int i,nmol,nvsite=0; ^ ../../../src/kernel/gmxcheck.c: In function 'tpx2methods': ../../../src/kernel/gmxcheck.c:140:15: warning: unused variable 'i' [-Wunused-variable] int i,step; ^ ../../../src/kernel/gmxcheck.c:136:15: warning: unused variable 'sh' [-Wunused-variable] t_tpxheader sh; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_bonds': ../../../src/kernel/gmxcheck.c:202:26: warning: variable 'devtot' set but not used [-Wunused-but-set-variable] real b0,blen,deviation,devtot; ^ ../../../src/kernel/gmxcheck.c:201:14: warning: unused variable 'i' [-Wunused-variable] int ftype,i,k,ai,aj,type; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_trj': ../../../src/kernel/gmxcheck.c:252:35: warning: unused variable 'bOK' [-Wunused-variable] bool bShowTimestep=TRUE,bOK,newline=FALSE; ^ ../../../src/kernel/gmxcheck.c:251:40: warning: unused variable 'prec' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:251:23: warning: unused variable 'tt' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:251:16: warning: unused variable 'rdum' [-Wunused-variable] real rdum,t,tt,old_t1,old_t2,prec; ^ ../../../src/kernel/gmxcheck.c:250:16: warning: variable 'fpos' set but not used [-Wunused-but-set-variable] off_t fpos; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_ndx': ../../../src/kernel/gmxcheck.c:526:10: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/kernel/gmxcheck.c: In function 'chk_enx': ../../../src/kernel/gmxcheck.c:550:25: warning: unused variable 'ndr' [-Wunused-variable] int in,nre,fnr,ndr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/kernel/gmxcheck.c:47: ../../../src/kernel/gmxcheck.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/kernel/gmxcheck.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/kernel/gmxcheck.c:57: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/kernel/gmxcheck.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ar cru .libs/libgmxpreprocess_mpi_d.a .libs/add_par.o .libs/compute_io.o .libs/convparm.o .libs/gen_ad.o .libs/gen_vsite.o .libs/genhydro.o .libs/gmxcpp.o .libs/gpp_atomtype.o .libs/gpp_bond_atomtype.o .libs/h_db.o .libs/hackblock.o .libs/hizzie.o .libs/pdb2top.o .libs/pgutil.o .libs/readir.o .libs/readpull.o .libs/resall.o .libs/sorting.o .libs/specbond.o .libs/ter_db.o .libs/tomorse.o .libs/topdirs.o .libs/topexcl.o .libs/topio.o .libs/toppush.o .libs/topshake.o .libs/toputil.o .libs/tpbcmp.o .libs/vsite_parm.o .libs/xlate.o ranlib .libs/libgmxpreprocess_mpi_d.a creating libgmxpreprocess_mpi_d.la (cd .libs && rm -f libgmxpreprocess_mpi_d.la && ln -s ../libgmxpreprocess_mpi_d.la libgmxpreprocess_mpi_d.la) /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o grompp grompp.o libgmxpreprocess_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o mdrun glaasje.o gctio.o ionize.o do_gct.o repl_ex.o xutils.o md.o mdrun.o genalg.o libgmxpreprocess_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o tpbconv tpbconv.o libgmxpreprocess_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o pdb2gmx pdb2gmx.o libgmxpreprocess_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o protonate protonate.o libgmxpreprocess_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o luck luck.o libgmxpreprocess_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o gmxdump gmxdump.o libgmxpreprocess_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o x2top x2top.o nm2type.o libgmxpreprocess_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/protonate protonate.o ./.libs/libgmxpreprocess_mpi_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/mdrun glaasje.o gctio.o ionize.o do_gct.o repl_ex.o xutils.o md.o mdrun.o genalg.o ./.libs/libgmxpreprocess_mpi_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/grompp grompp.o ./.libs/libgmxpreprocess_mpi_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/gmxdump gmxdump.o ./.libs/libgmxpreprocess_mpi_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/luck luck.o ./.libs/libgmxpreprocess_mpi_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/tpbconv tpbconv.o ./.libs/libgmxpreprocess_mpi_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating protonate DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/pdb2gmx pdb2gmx.o ./.libs/libgmxpreprocess_mpi_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o gmxcheck gmxcheck.o libgmxpreprocess_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath creating mdrun creating gmxdump creating grompp creating luck creating tpbconv creating pdb2gmx DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/x2top x2top.o nm2type.o ./.libs/libgmxpreprocess_mpi_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating x2top DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/gmxcheck gmxcheck.o ./.libs/libgmxpreprocess_mpi_d.a -lgslcblas -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -lopenblas -llapack -lgfortran -lm -lquadmath creating gmxcheck make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/kernel' Making all in tools make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/tools' /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o autocorr.lo ../../../src/tools/autocorr.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o expfit.lo ../../../src/tools/expfit.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o polynomials.lo ../../../src/tools/polynomials.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o levenmar.lo ../../../src/tools/levenmar.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o anadih.lo ../../../src/tools/anadih.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pp2shift.lo ../../../src/tools/pp2shift.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dlist.lo ../../../src/tools/dlist.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eigio.lo ../../../src/tools/eigio.c mkdir .libs mkdir .libs mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/dlist.c -fPIC -DPIC -o .libs/dlist.o mkdir: cannot create directory '.libs': File exists mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/pp2shift.c -fPIC -DPIC -o .libs/pp2shift.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/anadih.c -fPIC -DPIC -o .libs/anadih.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/levenmar.c -fPIC -DPIC -o .libs/levenmar.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/expfit.c -fPIC -DPIC -o .libs/expfit.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/eigio.c -fPIC -DPIC -o .libs/eigio.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/polynomials.c -fPIC -DPIC -o .libs/polynomials.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/autocorr.c -fPIC -DPIC -o .libs/autocorr.o ../../../src/tools/levenmar.c:78:16: warning: 'dvector' defined but not used [-Wunused-function] static double *dvector(int nl, int nh) ^ ../../../src/tools/levenmar.c:106:17: warning: 'dmatrix' defined but not used [-Wunused-function] static double **dmatrix(int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:123:14: warning: 'imatrix1' defined but not used [-Wunused-function] static int **imatrix1(int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:141:15: warning: 'submatrix' defined but not used [-Wunused-function] static real **submatrix(real **a, int oldrl, int oldrh, int oldcl, ^ ../../../src/tools/levenmar.c:168:13: warning: 'free_dvector' defined but not used [-Wunused-function] static void free_dvector(int *v, int nl) ^ ../../../src/tools/levenmar.c:183:13: warning: 'free_dmatrix' defined but not used [-Wunused-function] static void free_dmatrix(double **m, int nrl, int nrh, int ncl) ^ ../../../src/tools/levenmar.c:191:13: warning: 'free_imatrix' defined but not used [-Wunused-function] static void free_imatrix(int **m, int nrl, int nrh, int ncl) ^ ../../../src/tools/levenmar.c:201:13: warning: 'free_submatrix' defined but not used [-Wunused-function] static void free_submatrix(real **b, int nrl) ^ ../../../src/tools/levenmar.c:208:15: warning: 'convert_matrix' defined but not used [-Wunused-function] static real **convert_matrix(real *a, int nrl, int nrh, int ncl, int nch) ^ ../../../src/tools/levenmar.c:224:13: warning: 'free_convert_matrix' defined but not used [-Wunused-function] static void free_convert_matrix(real **b, int nrl) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/anadih.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/anadih.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/anadih.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/pp2shift.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/pp2shift.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/eigio.c:41: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/eigio.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/autocorr.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/autocorr.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/autocorr.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.h:40, from ../../../src/tools/autocorr.c:53: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/dlist.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/polynomials.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/expfit.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/expfit.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/expfit.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o lsq.lo ../../../src/tools/lsq.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o cmat.lo ../../../src/tools/cmat.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eigensolver.lo ../../../src/tools/eigensolver.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/cmat.c -fPIC -DPIC -o .libs/cmat.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/lsq.c -fPIC -DPIC -o .libs/lsq.o In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/lsq.c:41: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/lsq.c:42: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/lsq.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nsc.lo ../../../src/tools/nsc.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/eigensolver.c -fPIC -DPIC -o .libs/eigensolver.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o hxprops.lo ../../../src/tools/hxprops.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fitahx.lo ../../../src/tools/fitahx.c ../../../src/tools/eigensolver.c: In function 'eigensolver': ../../../src/tools/eigensolver.c:65:16: warning: unused variable 'iu' [-Wunused-variable] int il,iu,m,iw0,info; ^ ../../../src/tools/eigensolver.c:65:13: warning: unused variable 'il' [-Wunused-variable] int il,iu,m,iw0,info; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_analyze.lo ../../../src/tools/gmx_analyze.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_anaeig.lo ../../../src/tools/gmx_anaeig.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/hxprops.c -fPIC -DPIC -o .libs/hxprops.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/nsc.c -fPIC -DPIC -o .libs/nsc.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/fitahx.c -fPIC -DPIC -o .libs/fitahx.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_analyze.c -fPIC -DPIC -o .libs/gmx_analyze.o ../../../src/tools/hxprops.c: In function 'ellipticity': ../../../src/tools/hxprops.c:85:14: warning: unused variable 'Xi' [-Wunused-variable] const real Xi=1.0; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/hxprops.c:46: ../../../src/tools/hxprops.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/hxprops.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_angle.lo ../../../src/tools/gmx_angle.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_bond.lo ../../../src/tools/gmx_bond.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_anaeig.c -fPIC -DPIC -o .libs/gmx_anaeig.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_bundle.lo ../../../src/tools/gmx_bundle.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/fitahx.c:41: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/fitahx.c:41:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_analyze.c: In function 'luzar_correl': ../../../src/tools/gmx_analyze.c:514:8: warning: unused variable 'weight' [-Wunused-variable] real weight,d2; ^ ../../../src/tools/gmx_analyze.c:512:14: warning: unused variable 'tol' [-Wunused-variable] const real tol = 1e-8; ^ ../../../src/tools/gmx_analyze.c: In function 'gmx_analyze': ../../../src/tools/gmx_analyze.c:744:63: warning: unused variable 'bLuzarError' [-Wunused-variable] static bool bIntegrate=FALSE,bRegression=FALSE,bLuzar=FALSE,bLuzarError=FALSE; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_analyze.c:41: ../../../src/tools/gmx_analyze.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_analyze.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_analyze.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_analyze.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_analyze.c:273:13: warning: 'anal_ee' defined but not used [-Wunused-function] static real anal_ee(real *parm,real T,real t) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_bond.c -fPIC -DPIC -o .libs/gmx_bond.o ../../../src/tools/nsc.c: In function 'nsc_dclm_pbc': ../../../src/tools/nsc.c:652:21: warning: unused variable 'm' [-Wunused-variable] int ix,iy,iz,m; ^ ../../../src/tools/nsc.c:551:16: warning: unused variable 'jat_xx' [-Wunused-variable] int iat_xx,jat_xx; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/nsc.c:48: ../../../src/tools/nsc.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/nsc.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_angle.c -fPIC -DPIC -o .libs/gmx_angle.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_bundle.c -fPIC -DPIC -o .libs/gmx_bundle.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_chi.lo ../../../src/tools/gmx_chi.c ../../../src/tools/gmx_anaeig.c: In function 'calc_entropy_schlitter': ../../../src/tools/gmx_anaeig.c:98:10: warning: unused variable 'buf' [-Wunused-variable] char buf[256]; ^ ../../../src/tools/gmx_anaeig.c:97:16: warning: unused variable 'm' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:97:14: warning: unused variable 'k' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:97:12: warning: unused variable 'j' [-Wunused-variable] int i,j,k,m; ^ ../../../src/tools/gmx_anaeig.c:96:11: warning: unused variable 'indx' [-Wunused-variable] int *indx; ^ ../../../src/tools/gmx_anaeig.c: In function 'compare': ../../../src/tools/gmx_anaeig.c:224:12: warning: unused variable 'nrow' [-Wunused-variable] int n,nrow; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_bond.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_bond.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_bond.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_bond.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/gmx_anaeig.c: In function 'rmsf': ../../../src/tools/gmx_anaeig.c:692:9: warning: unused variable 'nrow' [-Wunused-variable] int nrow,g,v,i; ^ ../../../src/tools/gmx_anaeig.c: In function 'gmx_anaeig': ../../../src/tools/gmx_anaeig.c:835:21: warning: unused variable 'step' [-Wunused-variable] int natoms,step; ^ ../../../src/tools/gmx_anaeig.c:834:42: warning: unused variable 'lambda' [-Wunused-variable] real xid,totmass,*sqrtm,*w_rls,t,lambda; ^ ../../../src/tools/gmx_anaeig.c:834:14: warning: unused variable 'xid' [-Wunused-variable] real xid,totmass,*sqrtm,*w_rls,t,lambda; ^ ../../../src/tools/gmx_anaeig.c:832:18: warning: unused variable 'xread' [-Wunused-variable] rvec *x,*xread,*xav1,*xav2,**eigvec1=NULL,**eigvec2=NULL; ^ ../../../src/tools/gmx_anaeig.c:832:15: warning: unused variable 'x' [-Wunused-variable] rvec *x,*xread,*xav1,*xav2,**eigvec1=NULL,**eigvec2=NULL; ^ ../../../src/tools/gmx_anaeig.c:825:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_anaeig.c:825:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_anaeig.c:824:15: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_anaeig.c:41: ../../../src/tools/gmx_anaeig.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_anaeig.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_anaeig.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_anaeig.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_anaeig.c:53:0: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_chi.c -fPIC -DPIC -o .libs/gmx_chi.o ../../../src/tools/gmx_angle.c: In function 'gmx_angle': ../../../src/tools/gmx_angle.c:147:14: warning: unused variable 'buf' [-Wunused-variable] char buf[80]; ^ ../../../src/tools/gmx_angle.c:143:38: warning: unused variable 'fraction' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:143:16: warning: unused variable 'aa' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:143:14: warning: unused variable 't' [-Wunused-variable] real t,aa,aver,aver2,aversig,fraction; /* fraction trans dihedrals */ ^ ../../../src/tools/gmx_angle.c:138:55: warning: unused variable 'angind' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:39: warning: unused variable 'nat2' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:32: warning: unused variable 'natoms' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:138:18: warning: unused variable 'total' [-Wunused-variable] int i,j,total,nangles,natoms,nat2,first,last,angind; ^ ../../../src/tools/gmx_angle.c:135:21: warning: unused variable 'Jc' [-Wunused-variable] real maxang,Jc,S2,norm_fac,maxstat; ^ ../../../src/tools/gmx_angle.c:132:14: warning: unused variable 'status' [-Wunused-variable] int status,isize; ^ ../../../src/tools/gmx_angle.c:131:14: warning: unused variable 'tmp' [-Wunused-variable] real tmp,dt; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_angle.c:47: ../../../src/tools/gmx_angle.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_angle.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_angle.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_angle.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_cluster.lo ../../../src/tools/gmx_cluster.c ../../../src/tools/gmx_bundle.c: In function 'dump_axes': ../../../src/tools/gmx_bundle.c:141:17: warning: unused variable 'end' [-Wunused-variable] int i,end; ^ ../../../src/tools/gmx_bundle.c: In function 'gmx_bundle': ../../../src/tools/gmx_bundle.c:210:16: warning: unused variable 'j' [-Wunused-variable] int i,j,gnx[MAX_ENDS]; ^ ../../../src/tools/gmx_bundle.c:208:14: warning: unused variable 'natoms' [-Wunused-variable] int natoms; ^ ../../../src/tools/gmx_bundle.c:198:15: warning: unused variable 'out' [-Wunused-variable] FILE *out,*flen,*fdist,*fz,*ftilt,*ftiltr,*ftiltl; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_bundle.c:42: ../../../src/tools/gmx_bundle.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_bundle.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_bundle.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_bundle.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_cluster.c -fPIC -DPIC -o .libs/gmx_cluster.o ../../../src/tools/gmx_chi.c: In function 'histogramming': ../../../src/tools/gmx_chi.c:418:23: warning: unused variable 'his_aa1' [-Wunused-variable] int ***his_aa,**his_aa1,*histmp; ^ ../../../src/tools/gmx_chi.c: In function 'print_transitions': ../../../src/tools/gmx_chi.c:834:8: warning: variable 'nh' set but not used [-Wunused-but-set-variable] int nh[edMax]; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_confrms.lo ../../../src/tools/gmx_confrms.c ../../../src/tools/gmx_chi.c: In function 'gmx_chi': ../../../src/tools/gmx_chi.c:1098:16: warning: unused variable 'j' [-Wunused-variable] int i,j,**chi_lookup,*xity; ^ In file included from ../../../src/tools/gmx_chi.c:43:0: ../../../src/tools/gmx_chi.c: At top level: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/tools/gmx_chi.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_chi.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_chi.c:49:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_chi.c:59:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_cluster.c: In function 'mark_clusters': ../../../src/tools/gmx_cluster.c:638:11: warning: unused variable 'v' [-Wunused-variable] int i,j,v; ^ In file included from ../../../src/tools/gmx_cluster.c:45:0: ../../../src/tools/gmx_cluster.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_cluster.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_cluster.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_cluster.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_covar.lo ../../../src/tools/gmx_covar.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_current.lo ../../../src/tools/gmx_current.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_confrms.c -fPIC -DPIC -o .libs/gmx_confrms.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_covar.c -fPIC -DPIC -o .libs/gmx_covar.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_current.c -fPIC -DPIC -o .libs/gmx_current.o ../../../src/tools/gmx_current.c: In function 'calc_mjdsp': ../../../src/tools/gmx_current.c:266:7: warning: unused variable 'rfr' [-Wunused-variable] real rfr; ^ ../../../src/tools/gmx_current.c:265:8: warning: unused variable 'rtmp' [-Wunused-variable] real rtmp; ^ ../../../src/tools/gmx_current.c: In function 'dielectric': ../../../src/tools/gmx_current.c:338:8: warning: variable 'rest' set but not used [-Wunused-but-set-variable] real rest=0.0; ^ ../../../src/tools/gmx_current.c:326:8: warning: unused variable 'qtmp' [-Wunused-variable] real qtmp; ^ ../../../src/tools/gmx_current.c:308:13: warning: unused variable 'dm_d' [-Wunused-variable] real dm_s,dm_d; ^ ../../../src/tools/gmx_current.c:308:8: warning: unused variable 'dm_s' [-Wunused-variable] real dm_s,dm_d; ^ ../../../src/tools/gmx_current.c:298:8: warning: unused variable 'rfr' [-Wunused-variable] real rfr=0.0; ^ ../../../src/tools/gmx_current.c:293:33: warning: variable 'itrust' set but not used [-Wunused-but-set-variable] int valloc,nalloc,nfr,nvfr,m,itrust=0; ^ ../../../src/tools/gmx_current.c:293:31: warning: unused variable 'm' [-Wunused-variable] int valloc,nalloc,nfr,nvfr,m,itrust=0; ^ ../../../src/tools/gmx_current.c:292:17: warning: unused variable 'f' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c:292:15: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c:292:13: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l,f; ^ ../../../src/tools/gmx_current.c: In function 'gmx_current': ../../../src/tools/gmx_current.c:720:15: warning: unused variable 'tfile' [-Wunused-variable] FILE *tfile=NULL; ^ ../../../src/tools/gmx_current.c:719:15: warning: unused variable 'outi' [-Wunused-variable] FILE *outi=NULL; ^ ../../../src/tools/gmx_current.c:716:14: warning: unused variable 'lambda' [-Wunused-variable] real lambda; ^ ../../../src/tools/gmx_current.c:715:13: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_current.c:714:14: warning: unused variable 'step' [-Wunused-variable] int step; ^ ../../../src/tools/gmx_current.c:713:21: warning: unused variable 'l' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:713:17: warning: unused variable 'k' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:713:15: warning: unused variable 'j' [-Wunused-variable] int i,j,k=0,l; ^ ../../../src/tools/gmx_current.c:711:12: warning: unused variable 'natoms' [-Wunused-variable] int natoms; ^ ../../../src/tools/gmx_current.c:707:10: warning: variable 'bNEU' set but not used [-Wunused-but-set-variable] bool bNEU; ^ ../../../src/tools/gmx_current.c:706:13: warning: variable 'bTop' set but not used [-Wunused-but-set-variable] bool bTop; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_current.c:40: ../../../src/tools/gmx_current.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_current.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_current.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_current.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_density.lo ../../../src/tools/gmx_density.c ../../../src/tools/gmx_confrms.c: In function 'find_matching_names': ../../../src/tools/gmx_confrms.c:252:35: warning: unused variable 'atnm2' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:27: warning: unused variable 'atnm1' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:18: warning: unused variable 'resnm2' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:252:9: warning: unused variable 'resnm1' [-Wunused-variable] char *resnm1, *resnm2, *atnm1, *atnm2; ^ ../../../src/tools/gmx_confrms.c:249:7: warning: unused variable 'r' [-Wunused-variable] int r,rnr1, rnr2, prnr1, prnr2; ^ ../../../src/tools/gmx_confrms.c:247:7: warning: unused variable 'i' [-Wunused-variable] int i, i1, i2, ii1, ii2, m1, m2; ^ ../../../src/tools/gmx_confrms.c: In function 'gmx_confrms': ../../../src/tools/gmx_confrms.c:407:17: warning: unused variable 'tmas2' [-Wunused-variable] real tmas1,tmas2; ^ ../../../src/tools/gmx_confrms.c:407:11: warning: unused variable 'tmas1' [-Wunused-variable] real tmas1,tmas2; ^ ../../../src/tools/gmx_confrms.c:404:13: warning: unused variable 'j' [-Wunused-variable] int i,j,m; ^ In file included from ../../../src/tools/gmx_confrms.c:46:0: ../../../src/tools/gmx_confrms.c: At top level: /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_densmap.lo ../../../src/tools/gmx_densmap.c ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_confrms.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_confrms.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_confrms.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_confrms.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/tools/gmx_covar.c: In function 'gmx_covar': ../../../src/tools/gmx_covar.c:120:30: warning: unused variable 'count' [-Wunused-variable] int natoms,nat,ndim,count,nframes0,nframes,nlevels; ^ ../../../src/tools/gmx_covar.c:119:24: warning: unused variable 'step' [-Wunused-variable] int ntopatoms,step; ^ ../../../src/tools/gmx_covar.c:119:14: warning: unused variable 'ntopatoms' [-Wunused-variable] int ntopatoms,step; ^ ../../../src/tools/gmx_covar.c:109:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_covar.c:43: ../../../src/tools/gmx_covar.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_covar.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_covar.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_covar.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_density.c -fPIC -DPIC -o .libs/gmx_density.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_densmap.c -fPIC -DPIC -o .libs/gmx_densmap.o ../../../src/tools/gmx_density.c: In function 'calc_density': ../../../src/tools/gmx_density.c:261:9: warning: unused variable 'buf' [-Wunused-variable] char *buf; /* for tmp. keeping atomname */ ^ ../../../src/tools/gmx_density.c:254:9: warning: unused variable 'j' [-Wunused-variable] i,j,n, /* loop indices */ ^ ../../../src/tools/gmx_density.c:253:9: warning: unused variable 'slCount' [-Wunused-variable] **slCount, /* nr. of atoms in one slice for a group */ ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_density.c:48: ../../../src/tools/gmx_density.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_density.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_density.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_density.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_densmap.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_densmap.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_densmap.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_densmap.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dih.lo ../../../src/tools/gmx_dih.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dielectric.lo ../../../src/tools/gmx_dielectric.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dih.c -fPIC -DPIC -o .libs/gmx_dih.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dielectric.c -fPIC -DPIC -o .libs/gmx_dielectric.o In file included from ../../../src/tools/gmx_dih.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dih.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dih.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dih.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_dih.c:55:13: warning: 'dump_dih' defined but not used [-Wunused-function] static void dump_dih(int nframes,char *title,real time[],real dih[]) ^ ../../../src/tools/gmx_dielectric.c: In function 'calc_nbegin': ../../../src/tools/gmx_dielectric.c:60:11: warning: unused variable 'dtt' [-Wunused-variable] real dt,dtt; ^ ../../../src/tools/gmx_dielectric.c:60:8: warning: unused variable 'dt' [-Wunused-variable] real dt,dtt; ^ In file included from ../../../src/tools/gmx_dielectric.c:44:0: ../../../src/tools/gmx_dielectric.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_dielectric.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_dielectric.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dielectric.c:53:0: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_kinetics.lo ../../../src/tools/gmx_kinetics.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_spatial.lo ../../../src/tools/gmx_spatial.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dipoles.lo ../../../src/tools/gmx_dipoles.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_disre.lo ../../../src/tools/gmx_disre.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dist.lo ../../../src/tools/gmx_dist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_kinetics.c -fPIC -DPIC -o .libs/gmx_kinetics.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dipoles.c -fPIC -DPIC -o .libs/gmx_dipoles.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_spatial.c -fPIC -DPIC -o .libs/gmx_spatial.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_disre.c -fPIC -DPIC -o .libs/gmx_disre.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dist.c -fPIC -DPIC -o .libs/gmx_dist.o ../../../src/tools/gmx_spatial.c: In function 'gmx_spatial': ../../../src/tools/gmx_spatial.c:131:21: warning: unused variable 'shx' [-Wunused-variable] rvec *xtop,*shx[26]; ^ ../../../src/tools/gmx_spatial.c:103:15: warning: unused variable 'bSHIFT' [-Wunused-variable] static bool bSHIFT=FALSE; ^ ../../../src/tools/gmx_spatial.c: At top level: ../../../src/tools/gmx_spatial.c:38:14: warning: 'SRCID_template_c' defined but not used [-Wunused-variable] static char *SRCID_template_c = "$Id$"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_spatial.c:40: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_spatial.c:43: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_spatial.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_spatial.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_kinetics.c: In function 'epnm': ../../../src/tools/gmx_kinetics.c:96:16: warning: unused variable 'ii' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:96:13: warning: unused variable 'ni' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:96:10: warning: unused variable 'nn' [-Wunused-variable] int nn,ni,ii; ^ ../../../src/tools/gmx_kinetics.c:95:31: warning: unused variable 'to' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c:95:23: warning: unused variable 'from' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c:95:15: warning: unused variable 'buf' [-Wunused-variable] static char buf[32],from[8],to[8]; ^ ../../../src/tools/gmx_kinetics.c: In function 'dump_remd_parameters': ../../../src/tools/gmx_kinetics.c:559:8: warning: unused variable 'rhs' [-Wunused-variable] real rhs,tauf,taub,fff,DG; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_kinetics.c:42: ../../../src/tools/gmx_kinetics.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_kinetics.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_kinetics.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_kinetics.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_kinetics.c:85:14: warning: 'itoa' defined but not used [-Wunused-function] static char *itoa(int i) ^ ../../../src/tools/gmx_disre.c: In function 'check_viol': ../../../src/tools/gmx_disre.c:144:11: warning: variable 'ener' set but not used [-Wunused-but-set-variable] real ener,rt,mviol,tviol,viol,lam,dvdl,drt; ^ ../../../src/tools/gmx_disre.c: In function 'dump_disre_matrix': ../../../src/tools/gmx_disre.c:449:12: warning: unused variable 'iii' [-Wunused-variable] int iii,i,j,nra,nratoms,tp,ri,rj,index,nlabel,label; ^ In file included from ../../../src/tools/gmx_disre.c:44:0: ../../../src/tools/gmx_disre.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_disre.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_disre.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_disre.c:53: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_disre.c:54:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/tools/gmx_disre.c:57:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/tools/gmx_dipoles.c: In function 'do_gkr': ../../../src/tools/gmx_dipoles.c:156:17: warning: unused variable 'r2' [-Wunused-variable] real qtot,q,r2,cosa,rr,phi; ^ ../../../src/tools/gmx_dipoles.c:155:30: warning: unused variable 'index' [-Wunused-variable] int gi,gj,j0,j1,i,j,k,n,index,grp0,grp1; ^ ../../../src/tools/gmx_dipoles.c: In function 'print_gkrbin': ../../../src/tools/gmx_dipoles.c:291:14: warning: unused variable 'n' [-Wunused-variable] int i,j,n,last; ^ ../../../src/tools/gmx_dipoles.c:291:12: warning: unused variable 'j' [-Wunused-variable] int i,j,n,last; ^ ../../../src/tools/gmx_dipoles.c: In function 'mol_quad': ../../../src/tools/gmx_dipoles.c:418:17: warning: unused variable 'rcom_n' [-Wunused-variable] real rcom_m,rcom_n; ^ ../../../src/tools/gmx_dipoles.c:418:10: warning: unused variable 'rcom_m' [-Wunused-variable] real rcom_m,rcom_n; ^ ../../../src/tools/gmx_dipoles.c: In function 'compute_avercos': ../../../src/tools/gmx_dipoles.c:580:19: warning: unused variable 'n5' [-Wunused-variable] double dc,dc1,d,n5,ddc1,ddc2,ddc3; ^ ../../../src/tools/gmx_dipoles.c:580:13: warning: unused variable 'dc1' [-Wunused-variable] double dc,dc1,d,n5,ddc1,ddc2,ddc3; ^ ../../../src/tools/gmx_dipoles.c: In function 'do_dip': ../../../src/tools/gmx_dipoles.c:872:8: warning: unused variable 'gi' [-Wunused-variable] int gi,ind0,ind1; ^ ../../../src/tools/gmx_dipoles.c:675:27: warning: unused variable 'Vol' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:23: warning: unused variable 'Msq' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:20: warning: unused variable 'Mz' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:17: warning: unused variable 'My' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:675:14: warning: unused variable 'Mx' [-Wunused-variable] t_lsq Mx,My,Mz,Msq,Vol; ^ ../../../src/tools/gmx_dipoles.c:668:32: warning: unused variable 'lambda' [-Wunused-variable] real rcut=0,t,t0,t1,dt,lambda,dd,rms_cos; ^ ../../../src/tools/gmx_dipoles.c:667:25: warning: unused variable 'buf' [-Wunused-variable] char **enm=NULL,buf[STRLEN]; ^ ../../../src/tools/gmx_dipoles.c:665:44: warning: unused variable 'step' [-Wunused-variable] int *dipole_bin,ndipbin,ibin,iVol,step,idim=-1; ^ ../../../src/tools/gmx_dipoles.c:664:32: warning: unused variable 'nmol' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c:664:18: warning: unused variable 'k' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c:664:16: warning: unused variable 'j' [-Wunused-variable] int i,j,k,n,m,natom=0,nmol,status,gnx_tot,teller,tel3; ^ ../../../src/tools/gmx_dipoles.c: In function 'gmx_dipoles': ../../../src/tools/gmx_dipoles.c:1271:16: warning: unused variable 'bCorr' [-Wunused-variable] bool bCorr,bQuad,bGkr,bMU,bSlab; ^ ../../../src/tools/gmx_dipoles.c:1227:31: warning: unused variable 'bMolCorr' [-Wunused-variable] static bool bAverCorr=FALSE,bMolCorr=FALSE,bPairs=TRUE,bPhi=FALSE; ^ ../../../src/tools/gmx_dipoles.c:1227:15: warning: variable 'bAverCorr' set but not used [-Wunused-but-set-variable] static bool bAverCorr=FALSE,bMolCorr=FALSE,bPairs=TRUE,bPhi=FALSE; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dipoles.c:43: ../../../src/tools/gmx_dipoles.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dipoles.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dipoles.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_dipoles.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_dist.c: In function 'gmx_dist': ../../../src/tools/gmx_dist.c:101:21: warning: unused variable 'fplt' [-Wunused-variable] FILE *fp=NULL,*fplt=NULL; ^ ../../../src/tools/gmx_dist.c:93:11: warning: unused variable 'aid' [-Wunused-variable] atom_id aid; ^ ../../../src/tools/gmx_dist.c:87:17: warning: unused variable 'v' [-Wunused-variable] rvec *x=NULL,*v=NULL,dx; ^ In file included from ../../../src/tools/gmx_dist.c:45:0: ../../../src/tools/gmx_dist.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dist.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dist.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_dist.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_dyndom.lo ../../../src/tools/gmx_dyndom.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_enemat.lo ../../../src/tools/gmx_enemat.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_energy.lo ../../../src/tools/gmx_energy.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_dyndom.c -fPIC -DPIC -o .libs/gmx_dyndom.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_lie.lo ../../../src/tools/gmx_lie.c ../../../src/tools/gmx_dyndom.c: In function 'rot_conf': ../../../src/tools/gmx_dyndom.c:60:14: warning: unused variable 'j' [-Wunused-variable] int i,j,ai; ^ ../../../src/tools/gmx_dyndom.c:58:43: warning: unused variable 'temp43' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:58:36: warning: unused variable 'temp21' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:58:30: warning: unused variable 'temp4' [-Wunused-variable] mat4 temp1,temp2,temp3,temp4,temp21,temp43; ^ ../../../src/tools/gmx_dyndom.c:57:49: warning: unused variable 'Tx' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:57:42: warning: unused variable 'Tinvcm' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:57:38: warning: unused variable 'Tcm' [-Wunused-variable] mat4 Rx,Ry,Rz,Rinvy,Rinvz,Mtot,Tcm,Tinvcm,Tx; ^ ../../../src/tools/gmx_dyndom.c:55:18: warning: unused variable 'center' [-Wunused-variable] rvec arrow,center,xcm; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_dyndom.c:41: ../../../src/tools/gmx_dyndom.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_dyndom.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_dyndom.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_enemat.c -fPIC -DPIC -o .libs/gmx_enemat.o In file included from ../../../src/tools/gmx_dyndom.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_energy.c -fPIC -DPIC -o .libs/gmx_energy.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_lie.c -fPIC -DPIC -o .libs/gmx_lie.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_filter.lo ../../../src/tools/gmx_filter.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_gyrate.lo ../../../src/tools/gmx_gyrate.c ../../../src/tools/gmx_energy.c: In function 'select_by_name': ../../../src/tools/gmx_energy.c:139:8: warning: unused variable 'n' [-Wunused-variable] int n,k,kk,j,i,nmatch,nind,nss; ^ ../../../src/tools/gmx_energy.c: In function 'analyse_ener': ../../../src/tools/gmx_energy.c:529:16: warning: unused variable 'kkk' [-Wunused-variable] int i,j,m,k,kkk; ^ ../../../src/tools/gmx_energy.c:524:30: warning: unused variable 'diffav' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:22: warning: unused variable 'diffsum' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:14: warning: unused variable 'oldfrac' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c:524:8: warning: unused variable 'sfrac' [-Wunused-variable] real sfrac,oldfrac,diffsum,diffav,fstep,pr_aver,pr_stddev,fluct2; ^ ../../../src/tools/gmx_energy.c: In function 'fec': ../../../src/tools/gmx_energy.c:770:8: warning: unused variable 't' [-Wunused-variable] real t, aver, beta; ^ ../../../src/tools/gmx_energy.c:766:22: warning: unused variable 'step' [-Wunused-variable] int nre,timecheck,step,nenergy2,maxenergy; ^ ../../../src/tools/gmx_energy.c:766:8: warning: unused variable 'nre' [-Wunused-variable] int nre,timecheck,step,nenergy2,maxenergy; ^ ../../../src/tools/gmx_energy.c: In function 'gmx_energy': ../../../src/tools/gmx_energy.c:979:16: warning: unused variable 'nms' [-Wunused-variable] char **nms; ^ ../../../src/tools/gmx_energy.c:977:27: warning: unused variable 'enm2' [-Wunused-variable] char **enm=NULL,**enm2=NULL,**leg=NULL,**pairleg,**odtleg,**otenleg; ^ ../../../src/tools/gmx_energy.c:973:42: warning: unused variable 'bEDR' [-Wunused-variable] bool bFoundFirst,bFoundOld,bCont,bEDR,bVisco; ^ ../../../src/tools/gmx_energy.c:959:23: warning: unused variable 'ee' [-Wunused-variable] t_energy *oldee,**ee; ^ ../../../src/tools/gmx_energy.c:953:16: warning: unused variable 'drout' [-Wunused-variable] FILE **drout; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_energy.c:46: ../../../src/tools/gmx_energy.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_energy.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_energy.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_energy.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_energy.c:118:12: warning: 'strcount' defined but not used [-Wunused-function] static int strcount(char *s1,char *s2) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_h2order.lo ../../../src/tools/gmx_h2order.c In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_enemat.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_enemat.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_enemat.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_enemat.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_lie.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_lie.c:51: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_lie.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_lie.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_hbond.lo ../../../src/tools/gmx_hbond.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_helix.lo ../../../src/tools/gmx_helix.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_gyrate.c -fPIC -DPIC -o .libs/gmx_gyrate.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_filter.c -fPIC -DPIC -o .libs/gmx_filter.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_h2order.c -fPIC -DPIC -o .libs/gmx_h2order.o ../../../src/tools/gmx_gyrate.c: In function 'gmx_gyrate': ../../../src/tools/gmx_gyrate.c:190:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_gyrate.c:43: ../../../src/tools/gmx_gyrate.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_gyrate.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_gyrate.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_gyrate.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_h2order.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_h2order.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_h2order.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_h2order.c:54: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_helix.c -fPIC -DPIC -o .libs/gmx_helix.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_mindist.lo ../../../src/tools/gmx_mindist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_hbond.c -fPIC -DPIC -o .libs/gmx_hbond.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_filter.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_filter.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_filter.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_filter.c:53:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_msd.lo ../../../src/tools/gmx_msd.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_mindist.c -fPIC -DPIC -o .libs/gmx_mindist.o ../../../src/tools/gmx_helix.c: In function 'gmx_helix': ../../../src/tools/gmx_helix.c:213:21: warning: unused variable 'nre' [-Wunused-variable] int natoms,nre,nres,step; ^ In file included from ../../../src/tools/gmx_helix.c:43:0: ../../../src/tools/gmx_helix.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_helix.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_helix.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_helix.c:62:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_hbond.c: In function 'mk_hbmap': ../../../src/tools/gmx_hbond.c:182:10: warning: unused variable 'j' [-Wunused-variable] int i,j; ^ ../../../src/tools/gmx_hbond.c: In function 'add_frames': ../../../src/tools/gmx_hbond.c:194:14: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:12: warning: unused variable 'k' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:10: warning: unused variable 'j' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c:194:8: warning: unused variable 'i' [-Wunused-variable] int i,j,k,l; ^ ../../../src/tools/gmx_hbond.c: In function 'search_donors': ../../../src/tools/gmx_hbond.c:543:14: warning: unused variable 'stop' [-Wunused-variable] bool stop; ^ ../../../src/tools/gmx_hbond.c:539:22: warning: unused variable 'n' [-Wunused-variable] int i,j,nra,n; ^ ../../../src/tools/gmx_hbond.c:539:18: warning: unused variable 'nra' [-Wunused-variable] int i,j,nra,n; ^ ../../../src/tools/gmx_hbond.c: In function 'is_hbond': ../../../src/tools/gmx_hbond.c:900:19: warning: unused variable 'ihb' [-Wunused-variable] int h,hh,id,ja,ihb; ^ ../../../src/tools/gmx_hbond.c: In function 'merge_hb': ../../../src/tools/gmx_hbond.c:1021:44: warning: unused variable 'ogrp' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c:1021:40: warning: unused variable 'grp' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c:1021:32: warning: unused variable 'm' [-Wunused-variable] int i,inrnew,indnew,j,ii,jj,m,id,ia,grp,ogrp,ntmp; ^ ../../../src/tools/gmx_hbond.c: In function 'do_nhb_dist': ../../../src/tools/gmx_hbond.c:1077:8: warning: unused variable 'nhb' [-Wunused-variable] h_id nhb; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_morph.lo ../../../src/tools/gmx_morph.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_msd.c -fPIC -DPIC -o .libs/gmx_msd.o ../../../src/tools/gmx_hbond.c: In function 'smooth_tail': ../../../src/tools/gmx_hbond.c:1439:9: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/tools/gmx_hbond.c: In function 'analyse_corr': ../../../src/tools/gmx_hbond.c:1461:56: warning: unused variable 'dt' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:28: warning: unused variable 'dgp' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:25: warning: unused variable 'dg' [-Wunused-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c:1461:14: warning: variable 'chi22' set but not used [-Wunused-but-set-variable] real Q=0,chi22,chi2,dg,dgp,tau_hb,dtau,tau_rlx,e_1,dt,sigma_k,sigma_kp,ddg; ^ ../../../src/tools/gmx_hbond.c: In function 'do_hbac': ../../../src/tools/gmx_hbond.c:1585:27: warning: variable 'ngh' set but not used [-Wunused-but-set-variable] int nh,nhbonds,nhydro,ngh; ^ ../../../src/tools/gmx_hbond.c:1577:18: warning: unused variable 'nd' [-Wunused-variable] int i,j,k,m,n,nd,ihb,idist,n2,nn; ^ ../../../src/tools/gmx_hbond.c:1577:16: warning: unused variable 'n' [-Wunused-variable] int i,j,k,m,n,nd,ihb,idist,n2,nn; ^ ../../../src/tools/gmx_hbond.c: In function 'gmx_hbond': ../../../src/tools/gmx_hbond.c:2051:30: warning: unused variable 'bin' [-Wunused-variable] int grp,nabin,nrbin,bin,resdist,ihb; ^ ../../../src/tools/gmx_hbond.c:2049:43: warning: unused variable 'was' [-Wunused-variable] bool bSelected,bHBmap,bStop,bTwo,new,was,bBox,bTric; ^ ../../../src/tools/gmx_hbond.c:2049:39: warning: unused variable 'new' [-Wunused-variable] bool bSelected,bHBmap,bStop,bTwo,new,was,bBox,bTric; ^ ../../../src/tools/gmx_hbond.c:2045:34: warning: unused variable 'ja' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:31: warning: unused variable 'id' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:27: warning: unused variable 'end' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:21: warning: unused variable 'start' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ ../../../src/tools/gmx_hbond.c:2045:19: warning: unused variable 'l' [-Wunused-variable] int h,i,j,k,l,start,end,id,ja,ogrp,nsel; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_hbond.c:42: ../../../src/tools/gmx_hbond.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_hbond.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_hbond.c:53: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_hbond.c:53:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.h:40, from ../../../src/tools/gmx_hbond.c:59: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ ../../../src/tools/gmx_hbond.c:372:13: warning: 'in_list' defined but not used [-Wunused-function] static bool in_list(atom_id selection,int isize,atom_id *index) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmeig.lo ../../../src/tools/gmx_nmeig.c ../../../src/tools/gmx_msd.c: In function 'printmol': ../../../src/tools/gmx_msd.c:455:13: warning: unused variable 'r' [-Wunused-variable] real a,b,r,D,Dav,D2av,VarD,sqrtD,sqrtD_max,scale; ^ ../../../src/tools/gmx_msd.c:452:14: warning: unused variable 'out_pdb' [-Wunused-variable] FILE *out,out_pdb; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_msd.c:47: ../../../src/tools/gmx_msd.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_msd.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_msd.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_msd.c:144:13: warning: 'done_corr' defined but not used [-Wunused-function] static void done_corr(t_corr *this) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_morph.c -fPIC -DPIC -o .libs/gmx_morph.o ../../../src/tools/gmx_mindist.c: In function 'periodic_mindist_plot': ../../../src/tools/gmx_mindist.c:114:10: warning: unused variable 'r' [-Wunused-variable] real r,rmin,rmax,rmint,tmint; ^ ../../../src/tools/gmx_mindist.c: In function 'dist_plot': ../../../src/tools/gmx_mindist.c:245:16: warning: unused variable 'frout' [-Wunused-variable] t_trxframe frout; ^ ../../../src/tools/gmx_mindist.c: In function 'gmx_mindist': ../../../src/tools/gmx_mindist.c:473:15: warning: unused variable 'j' [-Wunused-variable] int i,j,nres=0; ^ ../../../src/tools/gmx_mindist.c:472:14: warning: unused variable 'atm' [-Wunused-variable] FILE *atm; ^ ../../../src/tools/gmx_mindist.c:467:14: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_mindist.c:441:16: warning: unused variable 'bugs' [-Wunused-variable] static char *bugs[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_mindist.c:48: ../../../src/tools/gmx_mindist.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_mindist.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_mindist.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_mindist.c:53: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmeig.c -fPIC -DPIC -o .libs/gmx_nmeig.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmens.lo ../../../src/tools/gmx_nmens.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_morph.c:40: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_morph.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmens.c -fPIC -DPIC -o .libs/gmx_nmens.o ../../../src/tools/gmx_nmeig.c: In function 'nma_full_hessian': ../../../src/tools/gmx_nmeig.c:76:19: warning: unused variable 'rdum' [-Wunused-variable] real mass_fac,rdum; ^ ../../../src/tools/gmx_nmeig.c: In function 'gmx_nmeig': ../../../src/tools/gmx_nmeig.c:229:15: warning: unused variable 'index' [-Wunused-variable] atom_id *index; ^ ../../../src/tools/gmx_nmeig.c:227:24: warning: unused variable 'gnx' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:227:22: warning: unused variable 'd' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:227:20: warning: unused variable 'l' [-Wunused-variable] int i,j,k,l,d,gnx; ^ ../../../src/tools/gmx_nmeig.c:226:15: warning: unused variable 'grpname' [-Wunused-variable] char *grpname,title[256]; ^ ../../../src/tools/gmx_nmeig.c:225:36: warning: unused variable 'count' [-Wunused-variable] int natoms,ndim,nrow,ncol,count; ^ ../../../src/tools/gmx_nmeig.c:224:19: warning: unused variable 'mass_fac' [-Wunused-variable] real rdum,mass_fac; ^ ../../../src/tools/gmx_nmeig.c:224:14: warning: unused variable 'rdum' [-Wunused-variable] real rdum,mass_fac; ^ ../../../src/tools/gmx_nmeig.c:217:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_nmeig.c:217:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmeig.c:43: ../../../src/tools/gmx_nmeig.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmeig.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmeig.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmeig.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_nmens.c: In function 'gmx_nmens': ../../../src/tools/gmx_nmens.c:105:14: warning: unused variable 'eigvalnr' [-Wunused-variable] int * eigvalnr; ^ ../../../src/tools/gmx_nmens.c:104:19: warning: unused variable 'invfr' [-Wunused-variable] real rfac,invfr,rhalf,jr; ^ ../../../src/tools/gmx_nmens.c:99:21: warning: unused variable 'neigval' [-Wunused-variable] int natoms,neigval; ^ ../../../src/tools/gmx_nmens.c:98:22: warning: unused variable 'totmass' [-Wunused-variable] real *eigval,totmass,*invsqrtm,t,disp; ^ ../../../src/tools/gmx_nmens.c:89:21: warning: unused variable 'trjout' [-Wunused-variable] int status,trjout; ^ ../../../src/tools/gmx_nmens.c:89:14: warning: unused variable 'status' [-Wunused-variable] int status,trjout; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmens.c:43: ../../../src/tools/gmx_nmens.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmens.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmens.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmens.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_nmens.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_order.lo ../../../src/tools/gmx_order.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_principal.lo ../../../src/tools/gmx_principal.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_order.c -fPIC -DPIC -o .libs/gmx_order.o In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../src/tools/gmx_msd.c: In function 'corr_loop': ../../../include/vec.h:325:4: warning: '*((void *)&com+16)' may be used uninitialized in this function [-Wmaybe-uninitialized] z=a[ZZ]-b[ZZ]; ^ ../../../src/tools/gmx_msd.c:525:29: note: '*((void *)&com+16)' was declared here rvec *x[2],*xa[2],com; ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:324:4: warning: '*((void *)&com+8)' may be used uninitialized in this function [-Wmaybe-uninitialized] y=a[YY]-b[YY]; ^ ../../../src/tools/gmx_msd.c:525:29: note: '*((void *)&com+8)' was declared here rvec *x[2],*xa[2],com; ^ In file included from ../../../src/tools/gmx_msd.c:57:0: ../../../include/vec.h:323:4: warning: 'com' may be used uninitialized in this function [-Wmaybe-uninitialized] x=a[XX]-b[XX]; ^ ../../../src/tools/gmx_msd.c:525:29: note: 'com' was declared here rvec *x[2],*xa[2],com; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_polystat.lo ../../../src/tools/gmx_polystat.c ../../../src/tools/gmx_order.c: In function 'find_nearest_neighbours': ../../../src/tools/gmx_order.c:86:12: warning: unused variable 'nnb' [-Wunused-variable] int **nnb; ^ ../../../src/tools/gmx_order.c:85:14: warning: unused variable 'mm' [-Wunused-variable] int m1,mm; ^ ../../../src/tools/gmx_order.c:85:11: warning: unused variable 'm1' [-Wunused-variable] int m1,mm; ^ ../../../src/tools/gmx_order.c:84:12: warning: unused variable 'd' [-Wunused-variable] t_dist *d; ^ ../../../src/tools/gmx_order.c:83:12: warning: unused variable 'dmat' [-Wunused-variable] t_mat *dmat; ^ ../../../src/tools/gmx_order.c:80:18: warning: unused variable 'dx2' [-Wunused-variable] rvec dx,dx1,dx2,rj,rk,urk,urj; ^ ../../../src/tools/gmx_order.c:80:14: warning: unused variable 'dx1' [-Wunused-variable] rvec dx,dx1,dx2,rj,rk,urk,urj; ^ ../../../src/tools/gmx_order.c:79:14: warning: unused variable 'i2' [-Wunused-variable] int i1,i2,i,ibin,j,k,l,n,*nn[4]; ^ ../../../src/tools/gmx_order.c:79:11: warning: unused variable 'i1' [-Wunused-variable] int i1,i2,i,ibin,j,k,l,n,*nn[4]; ^ ../../../src/tools/gmx_order.c:77:11: warning: unused variable 'fnsgdist' [-Wunused-variable] char fnsgdist[32]; ^ ../../../src/tools/gmx_order.c:76:12: warning: unused variable 'fpoutdist' [-Wunused-variable] FILE *fpoutdist; ^ ../../../src/tools/gmx_order.c: In function 'calc_tetra_order_parm': ../../../src/tools/gmx_order.c:228:14: warning: unused variable 'i' [-Wunused-variable] int i,*isize,ng,nframes; ^ ../../../src/tools/gmx_order.c:219:39: warning: unused variable 'subtitle' [-Wunused-variable] char title[STRLEN],fn[STRLEN],subtitle[STRLEN]; ^ ../../../src/tools/gmx_order.c:219:28: warning: unused variable 'fn' [-Wunused-variable] char title[STRLEN],fn[STRLEN],subtitle[STRLEN]; ^ ../../../src/tools/gmx_order.c: In function 'calc_order': ../../../src/tools/gmx_order.c:315:9: warning: unused variable 'dbangle' [-Wunused-variable] real dbangle = 0, /* angle between double bond and axis */ ^ ../../../src/tools/gmx_order.c:311:13: warning: unused variable 'l' [-Wunused-variable] i,j,m,k,l,teller = 0, ^ ../../../src/tools/gmx_order.c: In function 'gmx_order': ../../../src/tools/gmx_order.c:556:13: warning: unused variable 'i' [-Wunused-variable] i, ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_order.c:48: ../../../src/tools/gmx_order.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_order.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_order.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_order.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_principal.c -fPIC -DPIC -o .libs/gmx_principal.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_potential.lo ../../../src/tools/gmx_potential.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rama.lo ../../../src/tools/gmx_rama.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_polystat.c -fPIC -DPIC -o .libs/gmx_polystat.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rama.c -fPIC -DPIC -o .libs/gmx_rama.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_potential.c -fPIC -DPIC -o .libs/gmx_potential.o ../../../src/tools/gmx_principal.c: In function 'gmx_principal': ../../../src/tools/gmx_principal.c:97:20: warning: unused variable 'a3' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:97:17: warning: unused variable 'a2' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:97:14: warning: unused variable 'a1' [-Wunused-variable] rvec a1,a2,a3,moi; ^ ../../../src/tools/gmx_principal.c:95:28: warning: unused variable 'mol' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:24: warning: unused variable 'nam' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:18: warning: unused variable 'm' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:16: warning: unused variable 'j' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ ../../../src/tools/gmx_principal.c:95:14: warning: unused variable 'i' [-Wunused-variable] int i,j,m,gnx,nam,mol; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_principal.c:43: ../../../src/tools/gmx_principal.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_principal.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_principal.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_principal.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_polystat.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_polystat.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_polystat.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_polystat.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rama.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rama.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rama.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rama.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/gmx_potential.c: In function 'calc_potential': ../../../src/tools/gmx_potential.c:108:9: warning: unused variable 'j' [-Wunused-variable] i,j,n, /* loop indices */ ^ ../../../src/tools/gmx_potential.c:107:9: warning: unused variable 'slCount' [-Wunused-variable] **slCount, /* nr. of atoms in one slice for a group */ ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_potential.c:50: ../../../src/tools/gmx_potential.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_potential.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_potential.c:53:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_potential.c:55: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rdf.lo ../../../src/tools/gmx_rdf.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rms.lo ../../../src/tools/gmx_rms.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rmsdist.lo ../../../src/tools/gmx_rmsdist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rdf.c -fPIC -DPIC -o .libs/gmx_rdf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rms.c -fPIC -DPIC -o .libs/gmx_rms.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rmsdist.c -fPIC -DPIC -o .libs/gmx_rmsdist.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rmsf.lo ../../../src/tools/gmx_rmsf.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_rotacf.lo ../../../src/tools/gmx_rotacf.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_saltbr.lo ../../../src/tools/gmx_saltbr.c In file included from ../../../src/tools/gmx_rms.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rms.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rms.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rms.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_rmsdist.c: In function 'analyze_noe_equivalent': ../../../src/tools/gmx_rmsdist.c:249:11: warning: unused variable 'fp' [-Wunused-variable] FILE *fp; ^ ../../../src/tools/gmx_rmsdist.c: In function 'gmx_rmsdist': ../../../src/tools/gmx_rmsdist.c:534:36: warning: unused variable 'gj' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ ../../../src/tools/gmx_rmsdist.c:534:33: warning: unused variable 'gi' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ ../../../src/tools/gmx_rmsdist.c:534:24: warning: unused variable 'j' [-Wunused-variable] int natom,i,j,teller,gi,gj; ^ In file included from ../../../src/tools/gmx_rmsdist.c:47:0: ../../../src/tools/gmx_rmsdist.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rmsdist.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rmsdist.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rmsdist.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_rdf.c: In function 'do_rdf': ../../../src/tools/gmx_rdf.c:168:23: warning: unused variable 'index_cm' [-Wunused-variable] atom_id **index,*index_cm=NULL; ^ ../../../src/tools/gmx_rdf.c:167:21: warning: unused variable 'isize_cm' [-Wunused-variable] int *isize,isize_cm=0,nrdf=0,max_i,isize0,isize_g; ^ ../../../src/tools/gmx_rdf.c:164:40: warning: unused variable 'n' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:164:37: warning: unused variable 'j1' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:164:34: warning: unused variable 'j0' [-Wunused-variable] int g,natoms,i,j,k,nbin,j0,j1,n,nframes; ^ ../../../src/tools/gmx_rdf.c:162:28: warning: unused variable 'outf2' [-Wunused-variable] char outf1[STRLEN],outf2[STRLEN]; ^ ../../../src/tools/gmx_rdf.c:162:14: warning: unused variable 'outf1' [-Wunused-variable] char outf1[STRLEN],outf2[STRLEN]; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rdf.c:47: ../../../src/tools/gmx_rdf.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rdf.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rdf.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rdf.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/fftgrid.h:46:0, from ../../../src/tools/gmx_rdf.c:57: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rotacf.c -fPIC -DPIC -o .libs/gmx_rotacf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_saltbr.c -fPIC -DPIC -o .libs/gmx_saltbr.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_rmsf.c -fPIC -DPIC -o .libs/gmx_rmsf.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rotacf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_rotacf.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rotacf.c:54: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rotacf.c:54:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_saltbr.c: In function 'gmx_saltbr': ../../../src/tools/gmx_saltbr.c:163:14: warning: unused variable 'label' [-Wunused-variable] char label[234]; ^ ../../../src/tools/gmx_saltbr.c:162:17: warning: unused variable 'dt' [-Wunused-variable] double t0,dt; ^ ../../../src/tools/gmx_saltbr.c:162:14: warning: unused variable 't0' [-Wunused-variable] double t0,dt; ^ ../../../src/tools/gmx_saltbr.c:156:50: warning: unused variable 'n3' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ ../../../src/tools/gmx_saltbr.c:156:47: warning: unused variable 'n2' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ ../../../src/tools/gmx_saltbr.c:156:44: warning: unused variable 'n1' [-Wunused-variable] int status,i,j,k,m,nnn,teller,ncg,n1,n2,n3,natoms; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_saltbr.c:43: ../../../src/tools/gmx_saltbr.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_saltbr.c:43:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_saltbr.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_saltbr.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sas.lo ../../../src/tools/gmx_sas.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sdf.lo ../../../src/tools/gmx_sdf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sas.c -fPIC -DPIC -o .libs/gmx_sas.o ../../../src/tools/gmx_rmsf.c: In function 'gmx_rmsf': ../../../src/tools/gmx_rmsf.c:211:16: warning: unused variable 'buf' [-Wunused-variable] char buf[256],*label; ^ ../../../src/tools/gmx_rmsf.c:210:33: warning: unused variable 'res0' [-Wunused-variable] int status,npdbatoms,res0; ^ ../../../src/tools/gmx_rmsf.c:206:16: warning: unused variable 'bCont' [-Wunused-variable] bool bCont; ^ ../../../src/tools/gmx_rmsf.c:202:16: warning: unused variable 'ir' [-Wunused-variable] t_inputrec ir; ^ ../../../src/tools/gmx_rmsf.c:201:16: warning: unused variable 'header' [-Wunused-variable] t_tpxheader header; ^ ../../../src/tools/gmx_rmsf.c:199:33: warning: unused variable 'w_rms' [-Wunused-variable] real t,lambda,*w_rls,*w_rms; ^ ../../../src/tools/gmx_rmsf.c:199:18: warning: unused variable 'lambda' [-Wunused-variable] real t,lambda,*w_rls,*w_rms; ^ ../../../src/tools/gmx_rmsf.c:198:40: warning: unused variable 'g' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:31: warning: unused variable 'natoms' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:21: warning: unused variable 'nre' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:198:16: warning: unused variable 'step' [-Wunused-variable] int step,nre,natom,natoms,i,g,m,teller=0; ^ ../../../src/tools/gmx_rmsf.c:189:39: warning: unused variable 'bdevX' [-Wunused-variable] static bool bRes=FALSE,bAniso=FALSE,bdevX=FALSE,bFit=TRUE; ^ In file included from ../../../src/tools/gmx_rmsf.c:45:0: ../../../src/tools/gmx_rmsf.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_rmsf.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_rmsf.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_rmsf.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_rmsf.c:50:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sgangle.lo ../../../src/tools/gmx_sgangle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sdf.c -fPIC -DPIC -o .libs/gmx_sdf.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sorient.lo ../../../src/tools/gmx_sorient.c ../../../src/tools/gmx_sdf.c: In function 'do_sdf': ../../../src/tools/gmx_sdf.c:101:25: warning: unused variable 'bRefDone' [-Wunused-variable] bool bTop=FALSE,bRefDone=FALSE,bInGroup=FALSE; ^ ../../../src/tools/gmx_sdf.c:97:17: warning: unused variable 'jx' [-Wunused-variable] atom_id ix,jx; ^ ../../../src/tools/gmx_sdf.c:97:14: warning: unused variable 'ix' [-Wunused-variable] atom_id ix,jx; ^ ../../../src/tools/gmx_sdf.c:92:17: warning: unused variable 'xcog' [-Wunused-variable] rvec *x,xcog,dx,*x_i1,xi,*x_refmol; ^ ../../../src/tools/gmx_sdf.c:89:23: warning: variable 'hbox' set but not used [-Wunused-but-set-variable] real t,boxmin,hbox,normfac; ^ ../../../src/tools/gmx_sdf.c:88:15: warning: unused variable 'index_ref' [-Wunused-variable] atom_id *index_ref=NULL; ^ ../../../src/tools/gmx_sdf.c:87:15: warning: unused variable 'index_cg' [-Wunused-variable] atom_id *index_cg=NULL; ^ ../../../src/tools/gmx_sdf.c:85:24: warning: unused variable 'refc' [-Wunused-variable] int nrefmol=0,refc=0; ^ ../../../src/tools/gmx_sdf.c:83:14: warning: unused variable 'isize_ref' [-Wunused-variable] int isize_ref=3; ^ ../../../src/tools/gmx_sdf.c:82:14: warning: unused variable 'isize_cg' [-Wunused-variable] int isize_cg=0; ^ ../../../src/tools/gmx_sdf.c:75:41: warning: unused variable 'dest' [-Wunused-variable] int ng,natoms,i,j,k,l,X,Y,Z,lc,dest; ^ ../../../src/tools/gmx_sdf.c:75:38: warning: unused variable 'lc' [-Wunused-variable] int ng,natoms,i,j,k,l,X,Y,Z,lc,dest; ^ ../../../src/tools/gmx_sdf.c: At top level: ../../../src/tools/gmx_sdf.c:20:14: warning: 'SRCID_template_c' defined but not used [-Wunused-variable] static char *SRCID_template_c = "$Id$"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sdf.c:28: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sdf.c:28:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sdf.c:31:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sdf.c:33: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/gmx_sas.c: In function 'sas_plot': ../../../src/tools/gmx_sas.c:369:12: warning: unused variable 'mm' [-Wunused-variable] real mm; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sgangle.c -fPIC -DPIC -o .libs/gmx_sgangle.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sas.c:47: ../../../src/tools/gmx_sas.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sas.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sas.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sas.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_sas.c:55:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sorient.c -fPIC -DPIC -o .libs/gmx_sorient.o In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sgangle.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sgangle.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sgangle.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sgangle.c:52: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/gmx_sorient.c: In function 'gmx_sorient': ../../../src/tools/gmx_sorient.c:114:72: warning: unused variable 'mtot' [-Wunused-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:114:67: warning: unused variable 'mass' [-Wunused-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:114:20: warning: variable 'two_pi' set but not used [-Wunused-but-set-variable] real inp,outp,two_pi,nav,normfac,rmin2,rmax2,rcut,rcut2,r2,r,mass,mtot; ^ ../../../src/tools/gmx_sorient.c:108:13: warning: unused variable 'j' [-Wunused-variable] int i,j,p,sa0,sa1,sa2,n,ntot,nf,m,*hist1,*hist2,*histn,nbin1,nbin2,nrbin; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sorient.c:41: ../../../src/tools/gmx_sorient.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_sorient.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sorient.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sorient.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_spol.lo ../../../src/tools/gmx_spol.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_tcaf.lo ../../../src/tools/gmx_tcaf.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_traj.lo ../../../src/tools/gmx_traj.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_spol.c -fPIC -DPIC -o .libs/gmx_spol.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_velacc.lo ../../../src/tools/gmx_velacc.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_tcaf.c -fPIC -DPIC -o .libs/gmx_tcaf.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_traj.c -fPIC -DPIC -o .libs/gmx_traj.o ../../../src/tools/gmx_spol.c: In function 'gmx_spol': ../../../src/tools/gmx_spol.c:165:28: warning: unused variable 'bPBC' [-Wunused-variable] static bool bCom = FALSE,bPBC = FALSE; ^ ../../../src/tools/gmx_spol.c:131:13: warning: unused variable 'xtop' [-Wunused-variable] rvec *xtop,*x,xref,try,dx,dip,dir; ^ ../../../src/tools/gmx_spol.c:127:12: warning: unused variable 'title' [-Wunused-variable] char title[STRLEN]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_spol.c:41: ../../../src/tools/gmx_spol.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_spol.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_spol.c:45: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_spol.c:45:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_velacc.c -fPIC -DPIC -o .libs/gmx_velacc.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_helixorient.lo ../../../src/tools/gmx_helixorient.c ../../../src/tools/gmx_tcaf.c: In function 'gmx_tcaf': ../../../src/tools/gmx_tcaf.c:274:16: warning: unused variable 'c1' [-Wunused-variable] real **c1,**tc; ^ ../../../src/tools/gmx_tcaf.c:265:14: warning: unused variable 'bTPS' [-Wunused-variable] bool bTPS,bTop; /* ,bCubic; */ ^ In file included from ../../../src/tools/gmx_tcaf.c:43:0: ../../../src/tools/gmx_tcaf.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_tcaf.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_tcaf.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_tcaf.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_traj.c: In function 'write_pdb_bfac': ../../../src/tools/gmx_traj.c:337:11: warning: unused variable 'bOne' [-Wunused-variable] bool bOne; ^ ../../../src/tools/gmx_traj.c: In function 'gmx_traj': ../../../src/tools/gmx_traj.c:525:18: warning: unused variable 'n' [-Wunused-variable] int i,j,n; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_traj.c:42: ../../../src/tools/gmx_traj.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_traj.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_traj.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_traj.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_clustsize.lo ../../../src/tools/gmx_clustsize.c In file included from ../../../src/tools/gmx_velacc.c:43:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/gmx_velacc.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_velacc.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_velacc.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_mdmat.lo ../../../src/tools/gmx_mdmat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_helixorient.c -fPIC -DPIC -o .libs/gmx_helixorient.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wham.lo ../../../src/tools/gmx_wham.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_clustsize.c -fPIC -DPIC -o .libs/gmx_clustsize.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_mdmat.c -fPIC -DPIC -o .libs/gmx_mdmat.o ../../../src/tools/gmx_helixorient.c: In function 'gmx_helixorient': ../../../src/tools/gmx_helixorient.c:125:14: warning: unused variable 'rotangle' [-Wunused-variable] real tmp,rotangle; ^ ../../../src/tools/gmx_helixorient.c:107:10: warning: unused variable 'axes' [-Wunused-variable] rvec axes[3]; ^ ../../../src/tools/gmx_helixorient.c:106:10: warning: unused variable 'axes_t0' [-Wunused-variable] rvec axes_t0[3]; ^ ../../../src/tools/gmx_helixorient.c:93:27: warning: unused variable 'vproj' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:22: warning: unused variable 'vtmp' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:19: warning: unused variable 'p2' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:93:16: warning: unused variable 'p1' [-Wunused-variable] rvec v1,v2,p1,p2,vtmp,vproj; ^ ../../../src/tools/gmx_helixorient.c:92:10: warning: unused variable 'averageaxis' [-Wunused-variable] rvec averageaxis; ^ ../../../src/tools/gmx_helixorient.c:86:9: warning: unused variable 'd' [-Wunused-variable] int d,i,j,teller=0; ^ ../../../src/tools/gmx_helixorient.c:80:18: warning: unused variable 'dx' [-Wunused-variable] rvec *x=NULL,dx; ^ In file included from ../../../src/tools/gmx_helixorient.c:45:0: ../../../src/tools/gmx_helixorient.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_helixorient.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_helixorient.c:48: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_helixorient.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_clustsize.c: In function 'clust_size': ../../../src/tools/gmx_clustsize.c:94:50: warning: unused variable 'n_y' [-Wunused-variable] int i,j,k,ai,aj,ak,ci,cj,nframe,nclust,n_x,n_y,max_size=0; ^ ../../../src/tools/gmx_clustsize.c:94:23: warning: unused variable 'ak' [-Wunused-variable] int i,j,k,ai,aj,ak,ci,cj,nframe,nclust,n_x,n_y,max_size=0; ^ ../../../src/tools/gmx_clustsize.c:89:40: warning: unused variable 'nsame' [-Wunused-variable] int version,generation,sss,ii,jj,nsame; ^ ../../../src/tools/gmx_clustsize.c: In function 'gmx_clustsize': ../../../src/tools/gmx_clustsize.c:396:18: warning: unused variable 'bRDF' [-Wunused-variable] bool bSQ,bRDF; ^ ../../../src/tools/gmx_clustsize.c:396:14: warning: unused variable 'bSQ' [-Wunused-variable] bool bSQ,bRDF; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_clustsize.c:47: ../../../src/tools/gmx_clustsize.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_clustsize.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_clustsize.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_clustsize.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/pme.h:46:0, from ../../../src/tools/gmx_clustsize.c:62: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o correl.lo ../../../src/tools/correl.c ../../../src/tools/gmx_mdmat.c: In function 'gmx_mdmat': ../../../src/tools/gmx_mdmat.c:193:14: warning: unused variable 'nr0' [-Wunused-variable] int nr0; ^ ../../../src/tools/gmx_mdmat.c:192:45: warning: unused variable 'it' [-Wunused-variable] int i,j,status,nres,natoms,nframes,it,trxnat; ^ ../../../src/tools/gmx_mdmat.c:165:15: warning: unused variable 'bAtom' [-Wunused-variable] static bool bAtom=FALSE; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_mdmat.c:44: ../../../src/tools/gmx_mdmat.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_mdmat.c:44:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_mdmat.c:48: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_mdmat.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_wham.c -fPIC -DPIC -o .libs/gmx_wham.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_sham.lo ../../../src/tools/gmx_sham.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_nmtraj.lo ../../../src/tools/gmx_nmtraj.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/correl.c -fPIC -DPIC -o .libs/correl.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_sham.c -fPIC -DPIC -o .libs/gmx_sham.o ../../../src/tools/correl.c: In function 'complex_mult': ../../../src/tools/correl.c:189:10: warning: unused variable 'no2' [-Wunused-variable] int i,no2,n_2,k; ^ In file included from ../../../include/gmx_fft.h:41:0, from ../../../src/tools/correl.c:43: ../../../src/tools/correl.c: At top level: ../../../include/gmxcomplex.h:52:18: warning: 'cnul' defined but not used [-Wunused-variable] static t_complex cnul = { 0.0, 0.0 }; ^ ../../../include/gmxcomplex.h:64:18: warning: 'rcexp' defined but not used [-Wunused-function] static t_complex rcexp(real r) ^ ../../../include/gmxcomplex.h:75:18: warning: 'cadd' defined but not used [-Wunused-function] static t_complex cadd(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:85:18: warning: 'csub' defined but not used [-Wunused-function] static t_complex csub(t_complex a,t_complex b) ^ ../../../include/gmxcomplex.h:115:18: warning: 'cdiv' defined but not used [-Wunused-function] static t_complex cdiv(t_complex teller,t_complex noemer) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjconv.lo ../../../src/tools/gmx_trjconv.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_nmtraj.c -fPIC -DPIC -o .libs/gmx_nmtraj.o ../../../src/tools/gmx_sham.c: In function 'do_sham': ../../../src/tools/gmx_sham.c:286:32: warning: unused variable 'd' [-Wunused-variable] int i,j,k,imin,len,index,d,*nbin,*bindex,bi; ^ ../../../src/tools/gmx_sham.c: In function 'gmx_sham': ../../../src/tools/gmx_sham.c:778:41: warning: unused variable 'db' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:36: warning: unused variable 'cum4' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:31: warning: unused variable 'cum3' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:26: warning: unused variable 'cum2' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:21: warning: unused variable 'cum1' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:17: warning: unused variable 'sig' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:778:13: warning: unused variable 'av' [-Wunused-variable] double *av,*sig,cum1,cum2,cum3,cum4,db; ^ ../../../src/tools/gmx_sham.c:776:66: warning: unused variable 'error' [-Wunused-variable] real **val,**et_val,**dt_val,*t,*e_t,e_dt,d_dt,*d_t,dt,tot,error; ^ ../../../src/tools/gmx_sham.c:776:62: warning: unused variable 'tot' [-Wunused-variable] real **val,**et_val,**dt_val,*t,*e_t,e_dt,d_dt,*d_t,dt,tot,error; ^ ../../../src/tools/gmx_sham.c:775:51: warning: unused variable 'j' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:775:28: warning: unused variable 's' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:775:22: warning: unused variable 'nlast' [-Wunused-variable] int n,e_n,d_n,nlast,s,nset,e_nset,d_nset,i,j=0,*idim,*ibox; ^ ../../../src/tools/gmx_sham.c:774:13: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ ../../../src/tools/gmx_sham.c:728:35: warning: unused variable 'resol' [-Wunused-variable] static int nsets_in=1,nb_min=4,resol=10,nlevels=25; ^ ../../../src/tools/gmx_sham.c:728:26: warning: unused variable 'nb_min' [-Wunused-variable] static int nsets_in=1,nb_min=4,resol=10,nlevels=25; ^ ../../../src/tools/gmx_sham.c:723:15: warning: unused variable 'bShamEner' [-Wunused-variable] static bool bShamEner=TRUE,bSham=TRUE; ^ ../../../src/tools/gmx_sham.c:722:56: warning: unused variable 'bPower' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:41: warning: unused variable 'bEeFitAc' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:28: warning: unused variable 'bEENLC' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:722:15: warning: unused variable 'bEESEF' [-Wunused-variable] static bool bEESEF=FALSE,bEENLC=FALSE,bEeFitAc=FALSE,bPower=FALSE; ^ ../../../src/tools/gmx_sham.c:721:66: warning: unused variable 'bXYdy' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:721:50: warning: unused variable 'bAverCorr' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:721:38: warning: unused variable 'bSubAv' [-Wunused-variable] static bool bHaveT=TRUE,bDer=FALSE,bSubAv=TRUE,bAverCorr=FALSE,bXYdy=FALSE; ^ ../../../src/tools/gmx_sham.c:720:36: warning: unused variable 'filtlen' [-Wunused-variable] static real tb=-1,te=-1,frac=0.5,filtlen=0,binwidth=0.1; ^ ../../../src/tools/gmx_sham.c:720:27: warning: unused variable 'frac' [-Wunused-variable] static real tb=-1,te=-1,frac=0.5,filtlen=0,binwidth=0.1; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_sham.c:41: ../../../src/tools/gmx_sham.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_sham.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_sham.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_sham.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_sham.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjcat.lo ../../../src/tools/gmx_trjcat.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_trjorder.lo ../../../src/tools/gmx_trjorder.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_xpm2ps.lo ../../../src/tools/gmx_xpm2ps.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjconv.c -fPIC -DPIC -o .libs/gmx_trjconv.o In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_wham.c:44: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_wham.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_wham.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_wham.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjcat.c -fPIC -DPIC -o .libs/gmx_trjcat.o ../../../src/tools/gmx_trjcat.c: In function 'scan_trj_files': ../../../src/tools/gmx_trjcat.c:78:8: warning: unused variable 't' [-Wunused-variable] real t; ^ ../../../src/tools/gmx_trjcat.c: In function 'gmx_trjcat': ../../../src/tools/gmx_trjcat.c:392:58: warning: unused variable 'last_ok_step' [-Wunused-variable] int earliersteps,nfile_in,nfile_out,*cont_type,last_ok_step; ^ ../../../src/tools/gmx_trjcat.c:388:34: warning: unused variable 'in_file' [-Wunused-variable] char **fnms,**fnms_out,*in_file,*out_file; ^ ../../../src/tools/gmx_trjcat.c:385:19: warning: unused variable 'v' [-Wunused-variable] rvec *x,*v; ^ ../../../src/tools/gmx_trjcat.c:385:16: warning: unused variable 'x' [-Wunused-variable] rvec *x,*v; ^ ../../../src/tools/gmx_trjcat.c:384:53: warning: unused variable 'trjout' [-Wunused-variable] int status,ftpin,i,frame,frame_out,step=0,trjout=0; ^ ../../../src/tools/gmx_trjcat.c:384:22: warning: unused variable 'ftpin' [-Wunused-variable] int status,ftpin,i,frame,frame_out,step=0,trjout=0; ^ In file included from ../../../src/tools/gmx_trjcat.c:46:0: ../../../src/tools/gmx_trjcat.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjcat.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_trjcat.c:52:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjcat.c:56: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjcat.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_xpm2ps.c -fPIC -DPIC -o .libs/gmx_xpm2ps.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_trjorder.c -fPIC -DPIC -o .libs/gmx_trjorder.o ../../../src/tools/gmx_nmtraj.c: In function 'gmx_nmtraj': ../../../src/tools/gmx_nmtraj.c:129:14: warning: variable 'dum' set but not used [-Wunused-but-set-variable] real dum; ^ ../../../src/tools/gmx_trjconv.c: In function 'calc_pbc_cluster': ../../../src/tools/gmx_nmtraj.c:124:14: warning: unused variable 'found' [-Wunused-variable] bool found; ^ ../../../src/tools/gmx_trjconv.c:89:34: warning: unused variable 'is' [-Wunused-variable] int m,i,j,j0,j1,jj,ai,iter,is; ^ ../../../src/tools/gmx_trjconv.c: In function 'put_molecule_com_in_box': ../../../src/tools/gmx_nmtraj.c:123:25: warning: unused variable 'sum' [-Wunused-variable] real omega,Ekin,sum,m,vel; ^ ../../../src/tools/gmx_nmtraj.c:121:15: warning: unused variable 'out_eigval' [-Wunused-variable] real *out_eigval; ^ ../../../src/tools/gmx_nmtraj.c:115:14: warning: unused variable 'neigval' [-Wunused-variable] int neigval; ^ ../../../src/tools/gmx_trjconv.c:252:29: warning: unused variable 'dx' [-Wunused-variable] rvec com,new_com,shift,dx,box_center; ^ ../../../src/tools/gmx_trjconv.c: In function 'put_residue_com_in_box': ../../../src/tools/gmx_nmtraj.c:113:14: warning: unused variable 'grpname' [-Wunused-variable] char * grpname; ^ ../../../src/tools/gmx_nmtraj.c:111:14: warning: unused variable 'indexfile' [-Wunused-variable] char * indexfile; ^ ../../../src/tools/gmx_nmtraj.c:109:30: warning: unused variable 'v' [-Wunused-variable] int i,j,k,kmode,d,s,v; ^ ../../../src/tools/gmx_nmtraj.c:109:28: warning: unused variable 's' [-Wunused-variable] int i,j,k,kmode,d,s,v; ^ ../../../src/tools/gmx_nmtraj.c:105:15: warning: unused variable 'eigvalnr' [-Wunused-variable] int *eigvalnr; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_nmtraj.c:43: ../../../src/tools/gmx_nmtraj.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_nmtraj.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_nmtraj.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_nmtraj.c:50:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_nmtraj.c:54:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/tools/gmx_trjconv.c:303:37: warning: variable 'res_nat' set but not used [-Wunused-but-set-variable] atom_id i, j, res_start, res_end, res_nat; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../src/tools/gmx_trjconv.c: In function 'gmx_trjconv': ../../../src/tools/gmx_trjconv.c:726:16: warning: unused variable 'xdr' [-Wunused-variable] int xdr=0; ^ ../../../src/tools/gmx_trjconv.c:725:42: warning: unused variable 'command' [-Wunused-variable] char top_title[256],title[256],command[256],filemode[5]; ^ ../../../src/tools/gmx_trjconv.c:715:21: warning: variable 'bFitXY' set but not used [-Wunused-but-set-variable] bool bFit,bFitXY,bPFit,bReset; ^ ../../../src/tools/gmx_trjconv.c:707:25: warning: unused variable 'gn_rms' [-Wunused-variable] char *gn_fit,*gn_rms; ^ ../../../src/tools/gmx_trjconv.c:706:26: warning: unused variable 'ind_rms' [-Wunused-variable] atom_id *ind_fit,*ind_rms; ^ ../../../src/tools/gmx_trjconv.c:705:21: warning: unused variable 'irms' [-Wunused-variable] int ifit,irms,my_clust=-1; ^ ../../../src/tools/gmx_trjconv.c:695:55: warning: unused variable 'nre' [-Wunused-variable] int m,i,d,frame,outframe,natoms,nout,ncent,nre,newstep=0,model_nr; ^ ../../../src/tools/gmx_trjconv.c:694:23: warning: unused variable 'lambda' [-Wunused-variable] real xtcpr, lambda,*w_rls=NULL; ^ ../../../src/tools/gmx_trjconv.c:694:16: warning: unused variable 'xtcpr' [-Wunused-variable] real xtcpr, lambda,*w_rls=NULL; ^ ../../../src/tools/gmx_trjconv.c:693:49: warning: unused variable 'dx' [-Wunused-variable] rvec *xp=NULL,x_shift,hbox,box_center,dx; ^ ../../../src/tools/gmx_trjconv.c:693:38: warning: unused variable 'box_center' [-Wunused-variable] rvec *xp=NULL,x_shift,hbox,box_center,dx; ^ In file included from ../../../src/tools/gmx_trjconv.c:47:0: ../../../src/tools/gmx_trjconv.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjconv.c:51: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_trjconv.c:53:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjconv.c:57: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjconv.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_editconf.lo ../../../src/tools/gmx_editconf.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_trjorder.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_trjorder.c:47: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_trjorder.c:47:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_trjorder.c:49:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_xpm2ps.c: In function 'xpm_mat': ../../../src/tools/gmx_xpm2ps.c:559:14: warning: unused variable 'k' [-Wunused-variable] int i,j,k,x,y,col; ^ ../../../src/tools/gmx_xpm2ps.c:559:12: warning: unused variable 'j' [-Wunused-variable] int i,j,k,x,y,col; ^ ../../../src/tools/gmx_xpm2ps.c:558:10: warning: unused variable 'buf' [-Wunused-variable] char buf[100]; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'tick_spacing': ../../../src/tools/gmx_xpm2ps.c:599:18: warning: unused variable 'bFive' [-Wunused-variable] bool bTryAgain,bFive; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'ps_mat': ../../../src/tools/gmx_xpm2ps.c:644:12: warning: unused variable 'j' [-Wunused-variable] int i,j,x,y,col,leg=0; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'write_combined_matrix': ../../../src/tools/gmx_xpm2ps.c:919:14: warning: unused variable 'map' [-Wunused-variable] t_mapping *map=NULL; ^ ../../../src/tools/gmx_xpm2ps.c: In function 'gmx_xpm2ps': ../../../src/tools/gmx_xpm2ps.c:1127:56: warning: unused variable 'bAdd' [-Wunused-variable] static bool bFrame=TRUE,bZeroLine=FALSE,bYonce=FALSE,bAdd=FALSE; ^ In file included from ../../../src/tools/gmx_xpm2ps.c:42:0: ../../../src/tools/gmx_xpm2ps.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_xpm2ps.c:45: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genbox.lo ../../../src/tools/gmx_genbox.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_editconf.c -fPIC -DPIC -o .libs/gmx_editconf.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genion.lo ../../../src/tools/gmx_genion.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genconf.lo ../../../src/tools/gmx_genconf.c ../../../src/tools/gmx_editconf.c: In function 'calc_geom': ../../../src/tools/gmx_editconf.c:103:12: warning: unused variable 'grpnames' [-Wunused-variable] char *grpnames; ^ ../../../src/tools/gmx_editconf.c: In function 'set_pdb_conf_bfac': ../../../src/tools/gmx_editconf.c:195:9: warning: unused variable 'out' [-Wunused-variable] FILE *out; ^ ../../../src/tools/gmx_editconf.c: In function 'gmx_editconf': ../../../src/tools/gmx_editconf.c:518:35: warning: unused variable 'zcent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:29: warning: unused variable 'ycent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:23: warning: unused variable 'xcent' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:20: warning: unused variable 'zs' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:17: warning: unused variable 'ys' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:518:14: warning: unused variable 'xs' [-Wunused-variable] real xs,ys,zs,xcent,ycent,zcent,diam=0,mass=0,d,vdw; ^ ../../../src/tools/gmx_editconf.c:516:38: warning: unused variable 'bCubic' [-Wunused-variable] bool bIndex,bSetSize,bSetAng,bCubic,bDist,bSetCenter; ^ ../../../src/tools/gmx_editconf.c:512:30: warning: unused variable 'tindex' [-Wunused-variable] atom_id *index,*sindex,*tindex; ^ ../../../src/tools/gmx_editconf.c:511:26: warning: unused variable 'tsize' [-Wunused-variable] int isize,ssize,tsize; ^ ../../../src/tools/gmx_editconf.c:456:33: warning: unused variable 'to_diam' [-Wunused-variable] static real dist=0.0,rbox=0.0,to_diam=0.0; ^ ../../../src/tools/gmx_editconf.c:456:24: warning: unused variable 'rbox' [-Wunused-variable] static real dist=0.0,rbox=0.0,to_diam=0.0; ^ In file included from ../../../src/tools/gmx_editconf.c:43:0: ../../../src/tools/gmx_editconf.c: At top level: ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/tools/gmx_editconf.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_editconf.c:49: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_editconf.c:53: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_editconf.c:53:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_editconf.c:79:14: warning: 'pdbtp' defined but not used [-Wunused-variable] static char *pdbtp[epdbNR]={"ATOM ","HETATM"}; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genbox.c -fPIC -DPIC -o .libs/gmx_genbox.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genion.c -fPIC -DPIC -o .libs/gmx_genion.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genconf.c -fPIC -DPIC -o .libs/gmx_genconf.o ../../../src/tools/gmx_genbox.c: In function 'gmx_genbox': ../../../src/tools/gmx_genbox.c:665:11: warning: unused variable 'pbc' [-Wunused-variable] t_pbc pbc; ^ In file included from ../../../src/tools/gmx_genbox.c:47:0: ../../../src/tools/gmx_genbox.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_genbox.c:55: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genbox.c:55:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genbox.c:57: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genbox.c:61:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../src/tools/gmx_genconf.c:40:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genconf.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genconf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genconf.c:48:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ ../../../src/tools/gmx_genconf.c:93:13: warning: 'move_x' defined but not used [-Wunused-function] static void move_x(int natoms,rvec x[],matrix box) ^ ../../../src/tools/gmx_genion.c: In function 'insert_ion': ../../../src/tools/gmx_genion.c:72:8: warning: unused variable 'xei' [-Wunused-variable] rvec xei,dx; ^ ../../../src/tools/gmx_genion.c:70:29: warning: unused variable 'm' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ ../../../src/tools/gmx_genion.c:70:23: warning: unused variable 'wlast' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ ../../../src/tools/gmx_genion.c:70:16: warning: unused variable 'owater' [-Wunused-variable] int i,ii,ei,owater,wlast,m,nw; ^ In file included from ../../../src/tools/gmx_genion.c:41:0: ../../../src/tools/gmx_genion.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genion.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genion.c:48:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../src/tools/gmx_genion.c:51:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genion.c:54:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_genpr.lo ../../../src/tools/gmx_genpr.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_eneconv.lo ../../../src/tools/gmx_eneconv.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_vanhove.lo ../../../src/tools/gmx_vanhove.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_genpr.c -fPIC -DPIC -o .libs/gmx_genpr.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_eneconv.c -fPIC -DPIC -o .libs/gmx_eneconv.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_vanhove.c -fPIC -DPIC -o .libs/gmx_vanhove.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o gmx_wheel.lo ../../../src/tools/gmx_wheel.c ../../../src/tools/gmx_eneconv.c: In function 'gmx_eneconv': ../../../src/tools/gmx_eneconv.c:427:14: warning: unused variable 'ok' [-Wunused-variable] bool ok; ^ ../../../src/tools/gmx_eneconv.c:426:35: warning: unused variable 'chptr' [-Wunused-variable] char inputstring[STRLEN],*chptr; ^ ../../../src/tools/gmx_eneconv.c:426:14: warning: unused variable 'inputstring' [-Wunused-variable] char inputstring[STRLEN],*chptr; ^ ../../../src/tools/gmx_eneconv.c:425:42: warning: unused variable 't1' [-Wunused-variable] real *readtime,*settime,timestep,t1,tadjust; ^ ../../../src/tools/gmx_eneconv.c:421:42: warning: unused variable 'j' [-Wunused-variable] int nre,nremax,this_nre,nfile,i,j,kkk,nset,*set=NULL; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_eneconv.c:45: ../../../src/tools/gmx_eneconv.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_eneconv.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/tools/gmx_eneconv.c:101:13: warning: 'same_time' defined but not used [-Wunused-function] static bool same_time(real t1,real t2) ^ /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o addconf.lo ../../../src/tools/addconf.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_genpr.c:42: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_genpr.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_genpr.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_genpr.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_vanhove.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/gmx_vanhove.c:48:0: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_vanhove.c:51:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/gmx_vanhove.c:56:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/gmx_wheel.c -fPIC -DPIC -o .libs/gmx_wheel.o /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o calcpot.lo ../../../src/tools/calcpot.c /bin/sh ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o edittop.lo ../../../src/tools/edittop.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/addconf.c -fPIC -DPIC -o .libs/addconf.o ../../../src/tools/addconf.c: In function 'do_nsgrid': ../../../src/tools/addconf.c:205:14: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ ../../../src/tools/addconf.c: In function 'add_conf': ../../../src/tools/addconf.c:328:23: warning: unused variable 'xpp' [-Wunused-variable] rvec dx,xi,xj,xpp,*x_all,*v_all; ^ ../../../src/tools/addconf.c:326:34: warning: unused variable 'dz1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:30: warning: unused variable 'dz0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:26: warning: unused variable 'dy1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:22: warning: unused variable 'dy0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:18: warning: unused variable 'dx1' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:326:14: warning: unused variable 'dx0' [-Wunused-variable] int dx0,dx1,dy0,dy1,dz0,dz1; ^ ../../../src/tools/addconf.c:325:44: warning: unused variable 'maxincell' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:37: warning: unused variable 'ncells' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:35: warning: unused variable 'k' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:33: warning: unused variable 'd' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:325:19: warning: unused variable 'resnr' [-Wunused-variable] int prev,resnr,nresadd,d,k,ncells,maxincell; ^ ../../../src/tools/addconf.c:324:47: warning: unused variable 'iprot' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:324:21: warning: unused variable 'm' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:324:18: warning: unused variable 'jj' [-Wunused-variable] int i,j,jj,m,j0,j1,jjj,jnres,jnr,inr,iprot,is1,is2; ^ ../../../src/tools/addconf.c:322:47: warning: unused variable 'ib2' [-Wunused-variable] real max_vdw,*r_prot,*r_all,n2,r2,ib1,ib2; ^ ../../../src/tools/addconf.c:322:43: warning: unused variable 'ib1' [-Wunused-variable] real max_vdw,*r_prot,*r_all,n2,r2,ib1,ib2; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/addconf.c:42: ../../../src/tools/addconf.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/addconf.c:42:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/addconf.c:46:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/addconf.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/addconf.c:70:13: warning: 'set_margin' defined but not used [-Wunused-function] static void set_margin(t_atoms *atoms, rvec *x, real *r) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o do_dssp.o ../../../src/tools/do_dssp.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/calcpot.c -fPIC -DPIC -o .libs/calcpot.o mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c ../../../src/tools/edittop.c -fPIC -DPIC -o .libs/edittop.o ../../../src/tools/do_dssp.c: In function 'main': ../../../src/tools/do_dssp.c:347:16: warning: unused variable 'j' [-Wunused-variable] int i,j,natoms,nframe=0; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/do_dssp.c:47: ../../../src/tools/do_dssp.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/do_dssp.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/do_dssp.c:49:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/gmx_wheel.c:49: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/gmx_wheel.c:49:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/gmx_wheel.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/gmx_wheel.c:55: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/tools/edittop.c: In function 'delete_from_block': ../../../src/tools/edittop.c:104:17: warning: unused variable 'k' [-Wunused-variable] int i,i1,j1,j,k; ^ ../../../src/tools/edittop.c:104:12: warning: unused variable 'j1' [-Wunused-variable] int i,i1,j1,j,k; ^ ../../../src/tools/edittop.c: In function 'delete_atom': ../../../src/tools/edittop.c:161:7: warning: unused variable 'k' [-Wunused-variable] int k; ^ ../../../src/tools/calcpot.c: In function 'c_tabpot': ../../../src/tools/calcpot.c:79:8: warning: unused variable 'qqO' [-Wunused-variable] real qqO,qj; ^ ../../../src/tools/calcpot.c:78:43: warning: unused variable 'rinv2O' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:24: warning: unused variable 'fsO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:20: warning: unused variable 'vcO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:16: warning: unused variable 'tzO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:12: warning: unused variable 'tyO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:78:8: warning: unused variable 'txO' [-Wunused-variable] real txO,tyO,tzO,vcO,fsO,qO,rsqO,rinv1O,rinv2O; ^ ../../../src/tools/calcpot.c:76:28: warning: unused variable 'fzO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:24: warning: unused variable 'fyO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:20: warning: unused variable 'fxO' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:16: warning: unused variable 'fzJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:12: warning: unused variable 'fyJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:76:8: warning: unused variable 'fxJ' [-Wunused-variable] real fxJ,fyJ,fzJ,fxO,fyO,fzO; ^ ../../../src/tools/calcpot.c:75:38: warning: unused variable 'ggid' [-Wunused-variable] int ii,k,n,jnr,ii3,nj0,nj1,is3,j3,ggid; ^ ../../../src/tools/calcpot.c:71:50: warning: unused variable 'FF' [-Wunused-variable] real r1,r1t,fijC,eps,eps2,Y,F,Fp,Geps,Heps2,VV,FF; ^ ../../../src/tools/calcpot.c:71:15: warning: unused variable 'fijC' [-Wunused-variable] real r1,r1t,fijC,eps,eps2,Y,F,Fp,Geps,Heps2,VV,FF; ^ ../../../src/tools/calcpot.c:70:14: warning: unused variable 'two' [-Wunused-variable] const real two = 2.000000; ^ ../../../src/tools/calcpot.c: In function 'calc_pot': mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o editconf.o ../../../src/tools/editconf.c ../../../src/tools/calcpot.c:176:15: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ ../../../src/tools/calcpot.c: In function 'init_calcpot': ../../../src/tools/calcpot.c:238:12: warning: variable 'box_size' set but not used [-Wunused-but-set-variable] rvec box_size; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/calcpot.c:40: ../../../src/tools/calcpot.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/calcpot.c:40:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/calcpot.c:46:0: ../../../include/force.h:51:14: warning: 'sepdvdlformat' defined but not used [-Wunused-variable] static char *sepdvdlformat=" %-30s V %12.5e dVdl %12.5e\n"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o eneconv.o ../../../src/tools/eneconv.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genbox.o ../../../src/tools/genbox.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genconf.o ../../../src/tools/genconf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genrestr.o ../../../src/tools/genrestr.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmtraj.o ../../../src/tools/g_nmtraj.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o make_ndx.o ../../../src/tools/make_ndx.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o mk_angndx.o ../../../src/tools/mk_angndx.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjcat.o ../../../src/tools/trjcat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjconv.o ../../../src/tools/trjconv.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o trjorder.o ../../../src/tools/trjorder.c In file included from ../../../src/tools/mk_angndx.c:42:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/mk_angndx.c:43: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o wheel.o ../../../src/tools/wheel.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xpm2ps.o ../../../src/tools/xpm2ps.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o genion.o ../../../src/tools/genion.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o anadock.o ../../../src/tools/anadock.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o make_edi.o ../../../src/tools/make_edi.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_analyze.o ../../../src/tools/g_analyze.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_anaeig.o ../../../src/tools/g_anaeig.c ../../../src/tools/anadock.c: In function 'rmsd_dist': ../../../src/tools/anadock.c:197:13: warning: variable 'dist' set but not used [-Wunused-but-set-variable] real rmsd,dist; ^ In file included from ../../../src/tools/anadock.c:41:0: ../../../src/tools/anadock.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/anadock.c:46: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/anadock.c:46:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/tools/anadock.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_angle.o ../../../src/tools/g_angle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_bond.o ../../../src/tools/g_bond.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_bundle.o ../../../src/tools/g_bundle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_chi.o ../../../src/tools/g_chi.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_cluster.o ../../../src/tools/g_cluster.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_confrms.o ../../../src/tools/g_confrms.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_covar.o ../../../src/tools/g_covar.c In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/make_ndx.c:46: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/make_ndx.c:48:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/make_ndx.c:52: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/make_ndx.c:52:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_current.o ../../../src/tools/g_current.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_density.o ../../../src/tools/g_density.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_densmap.o ../../../src/tools/g_densmap.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dih.o ../../../src/tools/g_dih.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dielectric.o ../../../src/tools/g_dielectric.c ../../../src/tools/make_edi.c: In function 'main': ../../../src/tools/make_edi.c:640:10: warning: variable 'bTop' set but not used [-Wunused-but-set-variable] bool bTop, bFit1; ^ In file included from ../../../src/tools/make_edi.c:43:0: ../../../src/tools/make_edi.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/make_edi.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/make_edi.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ In file included from ../../../src/tools/make_edi.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/make_edi.c:56:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_helixorient.o ../../../src/tools/g_helixorient.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_principal.o ../../../src/tools/g_principal.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dipoles.o ../../../src/tools/g_dipoles.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_disre.o ../../../src/tools/g_disre.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dist.o ../../../src/tools/g_dist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_dyndom.o ../../../src/tools/g_dyndom.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_enemat.o ../../../src/tools/g_enemat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_energy.o ../../../src/tools/g_energy.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_lie.o ../../../src/tools/g_lie.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_filter.o ../../../src/tools/g_filter.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_gyrate.o ../../../src/tools/g_gyrate.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_h2order.o ../../../src/tools/g_h2order.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_hbond.o ../../../src/tools/g_hbond.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_helix.o ../../../src/tools/g_helix.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_mindist.o ../../../src/tools/g_mindist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_msd.o ../../../src/tools/g_msd.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_morph.o ../../../src/tools/g_morph.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmeig.o ../../../src/tools/g_nmeig.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_nmens.o ../../../src/tools/g_nmens.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_order.o ../../../src/tools/g_order.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_polystat.o ../../../src/tools/g_polystat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_potential.o ../../../src/tools/g_potential.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rama.o ../../../src/tools/g_rama.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rdf.o ../../../src/tools/g_rdf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rms.o ../../../src/tools/g_rms.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rmsdist.o ../../../src/tools/g_rmsdist.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rmsf.o ../../../src/tools/g_rmsf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_rotacf.o ../../../src/tools/g_rotacf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_saltbr.o ../../../src/tools/g_saltbr.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sas.o ../../../src/tools/g_sas.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sgangle.o ../../../src/tools/g_sgangle.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sham.o ../../../src/tools/g_sham.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sorient.o ../../../src/tools/g_sorient.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_spol.o ../../../src/tools/g_spol.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_sdf.o ../../../src/tools/g_sdf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_spatial.o ../../../src/tools/g_spatial.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_tcaf.o ../../../src/tools/g_tcaf.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_traj.o ../../../src/tools/g_traj.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_vanhove.o ../../../src/tools/g_vanhove.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_velacc.o ../../../src/tools/g_velacc.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_clustsize.o ../../../src/tools/g_clustsize.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_mdmat.o ../../../src/tools/g_mdmat.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_wham.o ../../../src/tools/g_wham.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o g_kinetics.o ../../../src/tools/g_kinetics.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/tools -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o sigeps.o ../../../src/tools/sigeps.c /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o libgmxana_mpi_d.la -rpath /usr/lib64 autocorr.lo expfit.lo polynomials.lo levenmar.lo anadih.lo pp2shift.lo dlist.lo eigio.lo lsq.lo cmat.lo eigensolver.lo nsc.lo hxprops.lo fitahx.lo gmx_analyze.lo gmx_anaeig.lo gmx_angle.lo gmx_bond.lo gmx_bundle.lo gmx_chi.lo gmx_cluster.lo gmx_confrms.lo gmx_covar.lo gmx_current.lo gmx_density.lo gmx_densmap.lo gmx_dih.lo gmx_dielectric.lo gmx_kinetics.lo gmx_spatial.lo gmx_dipoles.lo gmx_disre.lo gmx_dist.lo gmx_dyndom.lo gmx_enemat.lo gmx_energy.lo gmx_lie.lo gmx_filter.lo gmx_gyrate.lo gmx_h2order.lo gmx_hbond.lo gmx_helix.lo gmx_mindist.lo gmx_msd.lo gmx_morph.lo gmx_nmeig.lo gmx_nmens.lo gmx_order.lo gmx_principal.lo gmx_polystat.lo gmx_potential.lo gmx_rama.lo gmx_rdf.lo gmx_rms.lo gmx_rmsdist.lo gmx_rmsf.lo gmx_rotacf.lo gmx_saltbr.lo gmx_sas.lo gmx_sdf.lo gmx_sgangle.lo gmx_sorient.lo gmx_spol.lo gmx_tcaf.lo gmx_traj.lo gmx_velacc.lo gmx_helixorient.lo gmx_clustsize.lo gmx_mdmat.lo gmx_wham.lo correl.lo gmx_sham.lo gmx_nmtraj.lo gmx_trjconv.lo gmx_trjcat.lo gmx_trjorder.lo gmx_xpm2ps.lo gmx_editconf.lo gmx_genbox.lo gmx_genion.lo gmx_genconf.lo gmx_genpr.lo gmx_eneconv.lo gmx_vanhove.lo gmx_wheel.lo addconf.lo calcpot.lo edittop.lo ../gmxlib/libgmx_mpi_d.la ../mdlib/libmd_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte ../../../src/tools/sigeps.c: In function 'main': ../../../src/tools/sigeps.c:106:42: warning: unused variable 'pp' [-Wunused-variable] real qq,x,oldx,minimum,mval,dp[2],pp[2]; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/tools/sigeps.c:43: ../../../src/tools/sigeps.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/tools/sigeps.c:44:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../src/tools/sigeps.c:47:0: ../../../include/pdbio.h:52:14: warning: 'pdbformat' defined but not used [-Wunused-variable] static char *pdbformat ="%-6s%5u %-4.4s%3.3s %c%4d %8.3f%8.3f%8.3f"; ^ ../../../include/pdbio.h:53:14: warning: 'pdbformat4' defined but not used [-Wunused-variable] static char *pdbformat4="%-6s%5u %-4.4s %3.3s %c%4d %8.3f%8.3f%8.3f"; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/tools/sigeps.c:50: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/tools/sigeps.c:50:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -shared .libs/autocorr.o .libs/expfit.o .libs/polynomials.o .libs/levenmar.o .libs/anadih.o .libs/pp2shift.o .libs/dlist.o .libs/eigio.o .libs/lsq.o .libs/cmat.o .libs/eigensolver.o .libs/nsc.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_analyze.o .libs/gmx_anaeig.o .libs/gmx_angle.o .libs/gmx_bond.o .libs/gmx_bundle.o .libs/gmx_chi.o .libs/gmx_cluster.o .libs/gmx_confrms.o .libs/gmx_covar.o .libs/gmx_current.o .libs/gmx_density.o .libs/gmx_densmap.o .libs/gmx_dih.o .libs/gmx_dielectric.o .libs/gmx_kinetics.o .libs/gmx_spatial.o .libs/gmx_dipoles.o .libs/gmx_disre.o .libs/gmx_dist.o .libs/gmx_dyndom.o .libs/gmx_enemat.o .libs/gmx_energy.o .libs/gmx_lie.o .libs/gmx_filter.o .libs/gmx_gyrate.o .libs/gmx_h2order.o .libs/gmx_hbond.o .libs/gmx_helix.o .libs/gmx_mindist.o .libs/gmx_msd.o .libs/gmx_morph.o .libs/gmx_nmeig.o .libs/gmx_nmens.o .libs/gmx_order.o .libs/gmx_principal.o .libs/gmx_polystat.o .libs/gmx_potential.o .libs/gmx_rama.o .libs/gmx_rdf.o .libs/gmx_rms.o .libs/gmx_rmsdist.o .libs/gmx_rmsf.o .libs/gmx_rotacf.o .libs/gmx_saltbr.o .libs/gmx_sas.o .libs/gmx_sdf.o .libs/gmx_sgangle.o .libs/gmx_sorient.o .libs/gmx_spol.o .libs/gmx_tcaf.o .libs/gmx_traj.o .libs/gmx_velacc.o .libs/gmx_helixorient.o .libs/gmx_clustsize.o .libs/gmx_mdmat.o .libs/gmx_wham.o .libs/correl.o .libs/gmx_sham.o .libs/gmx_nmtraj.o .libs/gmx_trjconv.o .libs/gmx_trjcat.o .libs/gmx_trjorder.o .libs/gmx_xpm2ps.o .libs/gmx_editconf.o .libs/gmx_genbox.o .libs/gmx_genion.o .libs/gmx_genconf.o .libs/gmx_genpr.o .libs/gmx_eneconv.o .libs/gmx_vanhove.o .libs/gmx_wheel.o .libs/addconf.o .libs/calcpot.o .libs/edittop.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/lib64/openmpi/lib ../gmxlib/.libs/libgmx_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-Rpath:/usr/lib64/openmpi/lib -Wl,-soname -Wl,libgmxana_mpi_d.so.5 -o .libs/libgmxana_mpi_d.so.5.0.0 (cd .libs && rm -f libgmxana_mpi_d.so.5 && ln -s libgmxana_mpi_d.so.5.0.0 libgmxana_mpi_d.so.5) (cd .libs && rm -f libgmxana_mpi_d.so && ln -s libgmxana_mpi_d.so.5.0.0 libgmxana_mpi_d.so) creating libgmxana_mpi_d.la (cd .libs && rm -f libgmxana_mpi_d.la && ln -s ../libgmxana_mpi_d.la libgmxana_mpi_d.la) /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o do_dssp do_dssp.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o editconf editconf.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_editconf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o eneconv eneconv.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_eneconv.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genbox genbox.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/addconf.o .libs/gmx_genbox.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genconf genconf.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_genconf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genrestr genrestr.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_genpr.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmtraj g_nmtraj.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/eigio.o .libs/gmx_nmtraj.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o make_ndx make_ndx.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/do_dssp do_dssp.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genbox genbox.o .libs/addconf.o .libs/gmx_genbox.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/editconf editconf.o .libs/gmx_editconf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/make_ndx make_ndx.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genconf genconf.o .libs/gmx_genconf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genrestr genrestr.o .libs/gmx_genpr.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/eneconv eneconv.o .libs/gmx_eneconv.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmtraj g_nmtraj.o .libs/eigio.o .libs/gmx_nmtraj.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating genrestr creating do_dssp /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o mk_angndx mk_angndx.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjcat trjcat.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_trjcat.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_nmtraj /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjconv trjconv.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_trjconv.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating genbox creating genconf /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o trjorder trjorder.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_trjorder.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating editconf /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o wheel wheel.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_wheel.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating make_ndx /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o xpm2ps xpm2ps.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_xpm2ps.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating eneconv /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o genion genion.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/calcpot.o .libs/gmx_genion.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o anadock anadock.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/lsq.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/mk_angndx mk_angndx.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjcat trjcat.o .libs/gmx_trjcat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjconv trjconv.o .libs/gmx_trjconv.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/trjorder trjorder.o .libs/gmx_trjorder.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating mk_angndx DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/wheel wheel.o .libs/gmx_wheel.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o make_edi make_edi.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/eigio.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/genion genion.o .libs/calcpot.o .libs/gmx_genion.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating trjconv /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_analyze g_analyze.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o .libs/gmx_analyze.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/anadock anadock.o .libs/lsq.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating wheel /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_anaeig g_anaeig.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/eigio.o .libs/gmx_anaeig.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/xpm2ps xpm2ps.o .libs/gmx_xpm2ps.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating genion /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_angle g_angle.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_angle.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating anadock creating xpm2ps /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_bond g_bond.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/lsq.o .libs/gmx_bond.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_bundle g_bundle.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_bundle.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating trjcat /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_chi g_chi.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/pp2shift.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_chi.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating trjorder /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_cluster g_cluster.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/eigensolver.o .libs/cmat.o .libs/gmx_cluster.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_analyze g_analyze.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o .libs/gmx_analyze.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_anaeig g_anaeig.o .libs/eigio.o .libs/gmx_anaeig.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_angle g_angle.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_angle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/make_edi make_edi.o .libs/eigio.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_anaeig creating g_analyze DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_bundle g_bundle.o .libs/gmx_bundle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_confrms g_confrms.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_confrms.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_covar g_covar.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_covar.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_bond g_bond.o .libs/lsq.o .libs/gmx_bond.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_chi g_chi.o .libs/pp2shift.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/dlist.o .libs/anadih.o .libs/gmx_chi.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_angle creating g_bundle /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_current g_current.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_current.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_density g_density.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_density.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating make_edi creating g_bond creating g_chi /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_densmap g_densmap.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_densmap.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dih g_dih.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_dih.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dielectric g_dielectric.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dielectric.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_cluster g_cluster.o .libs/eigensolver.o .libs/cmat.o .libs/gmx_cluster.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_cluster /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_helixorient g_helixorient.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_helixorient.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_confrms g_confrms.o .libs/gmx_confrms.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_density g_density.o .libs/gmx_density.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_confrms /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_principal g_principal.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_principal.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_covar g_covar.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_covar.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_current g_current.o .libs/gmx_current.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dielectric g_dielectric.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dielectric.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dih g_dih.o .libs/gmx_dih.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_covar /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dipoles g_dipoles.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/lsq.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dipoles.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_densmap g_densmap.o .libs/gmx_densmap.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_density creating g_dih /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_disre g_disre.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_disre.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_helixorient g_helixorient.o .libs/gmx_helixorient.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_densmap /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dist g_dist.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_dist.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_dyndom g_dyndom.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_dyndom.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_dielectric creating g_current /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_enemat g_enemat.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_enemat.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_energy g_energy.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_energy.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_helixorient /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_lie g_lie.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_lie.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_principal g_principal.o .libs/gmx_principal.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dipoles g_dipoles.o .libs/lsq.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_dipoles.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_principal /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_filter g_filter.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_filter.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_disre g_disre.o .libs/gmx_disre.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dyndom g_dyndom.o .libs/gmx_dyndom.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_energy g_energy.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_energy.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_dipoles DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_dist g_dist.o .libs/gmx_dist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_gyrate g_gyrate.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_gyrate.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_enemat g_enemat.o .libs/gmx_enemat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_dyndom DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_lie g_lie.o .libs/gmx_lie.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_h2order g_h2order.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_h2order.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_enemat creating g_disre creating g_energy /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_hbond g_hbond.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_helix g_helix.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/hxprops.o .libs/fitahx.o .libs/gmx_helix.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_dist /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_mindist g_mindist.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_mindist.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_lie /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_msd g_msd.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/lsq.o .libs/gmx_msd.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_morph g_morph.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_morph.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_filter g_filter.o .libs/gmx_filter.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_filter /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmeig g_nmeig.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmeig.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_gyrate g_gyrate.o .libs/levenmar.o .libs/polynomials.o .libs/expfit.o .libs/correl.o .libs/autocorr.o .libs/gmx_gyrate.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_h2order g_h2order.o .libs/gmx_h2order.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_gyrate /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_nmens g_nmens.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmens.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_mindist g_mindist.o .libs/gmx_mindist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_helix g_helix.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_helix.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_hbond g_hbond.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_hbond.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_h2order DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_morph g_morph.o .libs/gmx_morph.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_msd g_msd.o .libs/lsq.o .libs/gmx_msd.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_order g_order.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_order.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_mindist creating g_msd /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_polystat g_polystat.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_polystat.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_potential g_potential.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_potential.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_helix creating g_morph /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rama g_rama.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_rama.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rdf g_rdf.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rdf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_hbond /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rms g_rms.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/cmat.o .libs/gmx_rms.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmeig g_nmeig.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmeig.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_nmeig /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rmsdist g_rmsdist.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_rmsdist.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_nmens g_nmens.o .libs/eigensolver.o .libs/eigio.o .libs/gmx_nmens.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_order g_order.o .libs/gmx_order.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_order /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rmsf g_rmsf.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/eigensolver.o .libs/gmx_rmsf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_nmens /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_rotacf g_rotacf.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rotacf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_polystat g_polystat.o .libs/gmx_polystat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_potential g_potential.o .libs/gmx_potential.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rama g_rama.o .libs/gmx_rama.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rdf g_rdf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rdf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_polystat /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_saltbr g_saltbr.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_saltbr.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rms g_rms.o .libs/cmat.o .libs/gmx_rms.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_potential creating g_rama creating g_rdf /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sas g_sas.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/nsc.o .libs/gmx_sas.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sgangle g_sgangle.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_sgangle.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sham g_sham.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_sham.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_rms /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sorient g_sorient.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_sorient.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rmsdist g_rmsdist.o .libs/gmx_rmsdist.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rmsdist /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_spol g_spol.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_spol.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rotacf g_rotacf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_rotacf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_rmsf g_rmsf.o .libs/eigensolver.o .libs/gmx_rmsf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_rotacf /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_sdf g_sdf.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_sdf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sham g_sham.o .libs/gmx_sham.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_saltbr g_saltbr.o .libs/gmx_saltbr.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_saltbr creating g_rmsf DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sgangle g_sgangle.o .libs/gmx_sgangle.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sas g_sas.o .libs/nsc.o .libs/gmx_sas.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_spatial g_spatial.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_spatial.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_tcaf g_tcaf.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_tcaf.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_sgangle /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_traj g_traj.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_traj.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_sham creating g_sas /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_vanhove g_vanhove.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_vanhove.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sorient g_sorient.o .libs/gmx_sorient.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_velacc g_velacc.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_velacc.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_sorient /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_clustsize g_clustsize.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_clustsize.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_spol g_spol.o .libs/gmx_spol.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_spol DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_sdf g_sdf.o .libs/gmx_sdf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_mdmat g_mdmat.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_mdmat.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_sdf /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_wham g_wham.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_wham.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_spatial g_spatial.o .libs/gmx_spatial.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_spatial DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_tcaf g_tcaf.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_tcaf.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o g_kinetics g_kinetics.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la .libs/gmx_kinetics.o -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_traj g_traj.o .libs/gmx_traj.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_velacc g_velacc.o .libs/levenmar.o .libs/expfit.o .libs/correl.o .libs/polynomials.o .libs/autocorr.o .libs/gmx_velacc.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_vanhove g_vanhove.o .libs/gmx_vanhove.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_tcaf DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_clustsize g_clustsize.o .libs/gmx_clustsize.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o sigeps sigeps.o libgmxana_mpi_d.la ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte creating g_vanhove creating g_traj creating g_velacc creating g_clustsize DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_mdmat g_mdmat.o .libs/gmx_mdmat.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_wham g_wham.o .libs/gmx_wham.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_mdmat creating g_wham DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/g_kinetics g_kinetics.o .libs/gmx_kinetics.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating g_kinetics DIE_RPATH_DIE="/usr/lib64:/usr/lib64/openmpi/lib:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -o .libs/sigeps sigeps.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/lib64/openmpi/lib ./.libs/libgmxana_mpi_d.so ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.so /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/openmpi/lib/libopen-pal.so /usr/lib64/openmpi/lib/libopen-rte.so creating sigeps make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/tools' Making all in ngmx make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/ngmx' mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o ngmx.o ../../../src/ngmx/ngmx.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xutil.o ../../../src/ngmx/xutil.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xmb.o ../../../src/ngmx/xmb.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o x11.o ../../../src/ngmx/x11.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlghi.o ../../../src/ngmx/xdlghi.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o fgrid.o ../../../src/ngmx/fgrid.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlgitem.o ../../../src/ngmx/xdlgitem.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o popup.o ../../../src/ngmx/popup.c ../../../src/ngmx/x11.c:132:13: warning: 'TestEvent' defined but not used [-Wunused-function] static Bool TestEvent(Display *disp,XEvent *event,char *arg) ^ ../../../src/ngmx/x11.c:265:13: warning: 'Xrm' defined but not used [-Wunused-function] static void Xrm(int *argc, char *argv[]) ^ ../../../src/ngmx/fgrid.c: In function 'GetBuf': ../../../src/ngmx/fgrid.c:101:7: warning: variable 'rc' set but not used [-Wunused-but-set-variable] int rc; ^ ../../../src/ngmx/fgrid.c: In function 'FGridFromFile': ../../../src/ngmx/fgrid.c:346:8: warning: unused variable 'newinfile' [-Wunused-variable] char newinfile[STRLEN]; ^ ../../../src/ngmx/fgrid.c:345:9: warning: unused variable 'gmxlib' [-Wunused-variable] char *gmxlib; ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o pulldown.o ../../../src/ngmx/pulldown.c ../../../src/ngmx/ngmx.c: In function 'dump_xw': ../../../src/ngmx/ngmx.c:68:8: warning: variable 'rc' set but not used [-Wunused-but-set-variable] int rc; ^ ../../../src/ngmx/ngmx.c: In function 'init_gmx': ../../../src/ngmx/ngmx.c:354:35: warning: unused variable 'nre' [-Wunused-variable] int step,natom,nre,natom_trx; ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/ngmx.c:49: ../../../src/ngmx/ngmx.c: At top level: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/ngmx/ngmx.c:52:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ ../../../src/ngmx/ngmx.c:65:13: warning: 'dump_xw' defined but not used [-Wunused-function] static void dump_xw(char *dispname,Window w,char *fn) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xdlg.o ../../../src/ngmx/xdlg.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o manager.o ../../../src/ngmx/manager.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o buttons.o ../../../src/ngmx/buttons.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nmol.o ../../../src/ngmx/nmol.c ../../../src/ngmx/manager.c: In function 'set_file': ../../../src/ngmx/manager.c:182:18: warning: unused variable 'idum' [-Wunused-variable] int i,idum; ^ ../../../src/ngmx/manager.c: In function 'step_man': ../../../src/ngmx/manager.c:312:15: warning: unused variable 'dum' [-Wunused-variable] int dum; ^ ../../../src/ngmx/manager.c:311:15: warning: unused variable 'rdum' [-Wunused-variable] real rdum; ^ In file included from ../../../src/ngmx/manager.c:48:0: ../../../src/ngmx/manager.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/ngmx/manager.c:55:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../include/gstat.h:45, from ../../../src/ngmx/manager.c:56: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ In file included from ../../../src/ngmx/manager.c:57:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o nleg.o ../../../src/ngmx/nleg.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o dialogs.o ../../../src/ngmx/dialogs.c ../../../src/ngmx/nmol.c: In function 'draw_box': ../../../src/ngmx/nmol.c:422:23: warning: unused variable 'tv2' [-Wunused-variable] iv2 vec2[NCUCEDGE],tv2; ^ In file included from ../../../include/vec.h:121:0, from ../../../src/ngmx/nmol.c:51: ../../../src/ngmx/nmol.c: At top level: ../../../include/maths.h:126:1: warning: 'gmx_numzero' defined but not used [-Wunused-function] gmx_numzero(double a) ^ In file included from ../../../src/ngmx/nmol.c:51:0: ../../../include/vec.h:760:13: warning: 'calc_lll' defined but not used [-Wunused-function] static void calc_lll(rvec box,rvec lll) ^ ../../../include/vec.h:787:13: warning: 'm_rvecsub' defined but not used [-Wunused-function] static void m_rvecsub(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:797:13: warning: 'm_rvecadd' defined but not used [-Wunused-function] static void m_rvecadd(int dim, rvec *a, rvec *b, rvec *c) ^ ../../../include/vec.h:829:13: warning: 'm_rvec_to_one' defined but not used [-Wunused-function] static void m_rvec_to_one(int dim, rvec *a) ^ ../../../include/vec.h:835:13: warning: 'm_rveccopy' defined but not used [-Wunused-function] static void m_rveccopy(int dim, rvec *a, rvec *b) ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o logo.o ../../../src/ngmx/logo.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o filter.o ../../../src/ngmx/filter.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o molps.o ../../../src/ngmx/molps.c mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o xrama.o ../../../src/ngmx/xrama.c In file included from ../../../src/ngmx/logo.c:45:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ mpicc -DHAVE_CONFIG_H -I. -I../../../src/ngmx -I../../src -I../../../include -DGMXLIBDIR=\"/usr/share/top\" -g -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -c -o highway.o ../../../src/ngmx/highway.c In file included from ../../../src/ngmx/highway.c:46:0: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/highway.c:47: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/ngmx/molps.c: In function 'ps_draw_mol': ../../../src/ngmx/molps.c:204:15: warning: unused variable 'ntime' [-Wunused-variable] static int ntime=0; ^ ../../../src/ngmx/molps.c:203:15: warning: unused variable 'tstr' [-Wunused-variable] static char tstr[2][20]; ^ ../../../src/ngmx/xrama.c: In function 'main': ../../../src/ngmx/xrama.c:319:15: warning: variable 'ramatop' set but not used [-Wunused-but-set-variable] t_topology *ramatop; ^ In file included from ../../../src/ngmx/xrama.c:44:0: ../../../src/ngmx/xrama.c: At top level: ../../../include/copyrite.h:54:20: warning: 'CopyrightText' defined but not used [-Wunused-variable] static const char *CopyrightText[] = { ^ ../../../include/copyrite.h:61:20: warning: 'GPLText' defined but not used [-Wunused-variable] static const char *GPLText[] = { ^ In file included from ../../../include/statutil.h:51:0, from ../../../src/ngmx/xrama.c:50: ../../../include/readinp.h:97:14: warning: 'argtp' defined but not used [-Wunused-variable] static char *argtp[etNR] = { ^ ../../../src/ngmx/dialogs.c:240:13: warning: 'Extract' defined but not used [-Wunused-function] static void Extract(t_dlg *dlg,int ID,char *buf) ^ ../../../src/ngmx/dialogs.c:373:13: warning: 'in_set' defined but not used [-Wunused-function] static bool in_set(int i,int n,int set[]) ^ /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o xrama xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath /bin/sh ../../libtool --tag=CC --mode=link mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -lgslcblas -o highway highway.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o ../mdlib/libmd_mpi_d.la ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath mkdir .libs DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/xrama xrama.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/ngmx ngmx.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath DIE_RPATH_DIE="/usr/lib64:$DIE_RPATH_DIE" mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -o .libs/highway highway.o xutil.o xmb.o x11.o xdlghi.o fgrid.o xdlgitem.o popup.o pulldown.o xdlg.o manager.o buttons.o nmol.o nleg.o dialogs.o logo.o filter.o molps.o -lgslcblas ../mdlib/.libs/libmd_mpi_d.so ../gmxlib/.libs/libgmx_mpi_d.so -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath creating xrama creating ngmx creating highway make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/ngmx' Making all in contrib make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/contrib' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/contrib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' Making all in admin make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/admin' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/admin' Making all in scripts make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/scripts' cat ../../scripts/GMXRC.in | sed 's,@bindir\@,/usr/bin,' > GMXRC cat ../../scripts/GMXRC.csh.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.csh cat ../../scripts/GMXRC.bash.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.bash cat ../../scripts/GMXRC.zsh.in | sed 's,@libdir\@,/usr/lib64,' | \ sed 's,@bindir\@,/usr/bin,' | \ sed 's,@datadir\@,/usr/share,' | \ sed 's,@mandir\@,/usr/share/man,' > GMXRC.zsh make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/scripts' Making all in share make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' Making all in top make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/top' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/top' Making all in tutor make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' Making all in nmr1 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr1' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr1' Making all in nmr2 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr2' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr2' Making all in speptide make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/speptide' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/speptide' Making all in water make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/water' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/water' Making all in gmxdemo make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/gmxdemo' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/gmxdemo' Making all in methanol make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/methanol' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/methanol' Making all in mixed make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/mixed' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/mixed' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' Making all in template make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/template' cat ../../../share/template/Template.mak | \ sed 's,@LDFLAGS\@,-L/usr/lib64 -lgslcblas ,' | \ sed 's,@LIBS\@,-lmd_mpi_d -lgmx_mpi_d -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath ,' | \ sed 's,@CFLAGS\@,-g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -I/usr/include -I/usr/include/gromacs -DGMX_DOUBLE,' | \ sed 's,@CC\@,mpicc,' | \ sed 's,@host\@,x86_64-alt-linux-gnu,' >Makefile.x86_64-alt-linux-gnu_double sed: -e expression #1, char 36: unknown option to `s' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/template' Making all in html make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' Making all in . make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' Making all in images make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/images' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/images' Making all in online make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/online' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/online' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' Making all in man make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' Making all in man1 make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man/man1' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man/man1' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' make[1]: Nothing to be done for `all-am'. make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' make: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' + popd ~/RPM/BUILD/gromacs-4.0.7 + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.8814 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/gromacs-buildroot + : + /bin/rm -rf -- /usr/src/tmp/gromacs-buildroot + cd gromacs-4.0.7 + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + pushd single ~/RPM/BUILD/gromacs-4.0.7/single ~/RPM/BUILD/gromacs-4.0.7 + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/gromacs-buildroot make: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' Making install in include make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' Making install in . make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/3dview.h ../../include/assert.h ../../include/atomprop.h ../../include/bondf.h ../../include/calcgrid.h ../../include/calch.h ../../include/calcmu.h ../../include/checkpoint.h ../../include/confio.h ../../include/constr.h ../../include/copyrite.h ../../include/coulomb.h ../../include/dihre.h ../../include/disre.h ../../include/domdec.h ../../include/domdec_network.h ../../include/do_fit.h ../../include/ebin.h ../../include/edsam.h ../../include/enxio.h ../../include/gmx_fatal.h ../../include/ffscanf.h ../../include/fftgrid.h ../../include/filenm.h ../../include/force.h ../../include/futil.h ../../include/gbutil.h ../../include/gmx_ana.h ../../include/gmx_arpack.h ../../include/gmx_blas.h ../../include/gmxcomplex.h ../../include/gmx_cyclecounter.h ../../include/gmxfio.h ../../include/gmx_fft.h ../../include/gmx_lapack.h ../../include/gmx_random.h ../../include/gmx_parallel_3dfft.h ../../include/gmx_system_xdr.h ../../include/gmx_thread.h ../../include/gmx_wallcycle.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/gpp_atomtype.h ../../include/gpp_nextnb.h ../../include/grompp.h ../../include/gstat.h ../../include/index.h ../../include/invblock.h ../../include/macros.h ../../include/magic.h ../../include/main.h ../../include/maths.h ../../include/matio.h ../../include/mdatoms.h ../../include/mdebin.h ../../include/mdrun.h ../../include/mpelogging.h ../../include/mshift.h ../../include/mtop_util.h ../../include/mtxio.h ../../include/mvdata.h ../../include/names.h ../../include/network.h ../../include/nonbonded.h ../../include/nrama.h ../../include/nrjac.h ../../include/nrnb.h ../../include/nsgrid.h ../../include/ns.h ../../include/orires.h ../../include/partdec.h ../../include/pbc.h ../../include/pdbio.h ../../include/pdebug.h ../../include/perf_est.h ../../include/physics.h ../../include/pme.h ../../include/pppm.h ../../include/princ.h ../../include/pull.h ../../include/qmmm.h ../../include/random.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/rbin.h ../../include/rdgroup.h ../../include/readcomp.h ../../include/readinp.h ../../include/reorder.h ../../include/rmpbc.h ../../include/shellfc.h ../../include/shift.h ../../include/smalloc.h ../../include/sortwater.h ../../include/sparsematrix.h ../../include/split.h ../../include/splitter.h ../../include/statusio.h ../../include/statutil.h ../../include/strdb.h ../../include/string2.h ../../include/struc2.h ../../include/symtab.h ../../include/sysstuff.h ../../include/tags.h ../../include/tgroup.h ../../include/topsort.h ../../include/tpxio.h ../../include/transfer.h ../../include/trnio.h ../../include/txtdump.h ../../include/typedefs.h ../../include/update.h ../../include/utils.h ../../include/vcm.h ../../include/vec.h ../../include/viewit.h ../../include/vsite.h ../../include/wgms.h ../../include/wman.h ../../include/writeps.h ../../include/xdrf.h ../../include/xtcio.h ../../include/xvgr.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' Making install in types make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include/types' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include/types' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs/types' /bin/install -p -m 644 ../../../include/types/atoms.h ../../../include/types/forcerec.h ../../../include/types/ifunc.h ../../../include/types/mdatom.h ../../../include/types/simple.h ../../../include/types/block.h ../../../include/types/constr.h ../../../include/types/energy.h ../../../include/types/graph.h ../../../include/types/inputrec.h ../../../include/types/nblist.h ../../../include/types/ns.h ../../../include/types/nsgrid.h ../../../include/types/symtab.h ../../../include/types/commrec.h ../../../include/types/enums.h ../../../include/types/group.h ../../../include/types/ishift.h ../../../include/types/nbslist.h ../../../include/types/topology.h ../../../include/types/fcdata.h ../../../include/types/filenm.h ../../../include/types/idef.h ../../../include/types/matrix.h ../../../include/types/nrnb.h ../../../include/types/trx.h ../../../include/types/state.h ../../../include/types/pbc.h ../../../include/types/qmmmrec.h ../../../include/types/shellfc.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs/types' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include/types' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include/types' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/include' Making install in src make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' Making install in gmxlib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' Making install in nonbonded make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' Making install in nb_kernel_x86_64_sse make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' Making install in nb_kernel make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' make install-am make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' make[6]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded/nb_kernel' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/nonbonded' Making install in gmx_blas make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_blas' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_blas' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_blas' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_blas' Making install in gmx_lapack make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_lapack' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_lapack' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_lapack' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/gmx_lapack' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libgmx.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/install -p .libs/libgmx.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmx.so.5.0.0 libgmx.so.5 || { rm -f libgmx.so.5 && ln -s libgmx.so.5.0.0 libgmx.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmx.so.5.0.0 libgmx.so || { rm -f libgmx.so && ln -s libgmx.so.5.0.0 libgmx.so; }; }) /bin/install -p .libs/libgmx.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib' Making install in mdlib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libmd.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' libtool: install: warning: relinking `libmd.la' (cd /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib; /bin/sh ../../libtool --tag=CC --mode=relink x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libmd.la -rpath /usr/lib64 calcmu.lo calcvir.lo constr.lo coupling.lo domdec.lo domdec_con.lo domdec_network.lo domdec_setup.lo domdec_top.lo ebin.lo edsam.lo ewald.lo fftgrid.lo force.lo ghat.lo init.lo mdatom.lo mdebin.lo minimize.lo mvxvf.lo ns.lo nsgrid.lo perf_est.lo pme.lo pme_pp.lo pppm.lo partdec.lo pull.lo pullutil.lo rf_util.lo shakef.lo sim_util.lo shellfc.lo stat.lo tables.lo tgroup.lo update.lo vcm.lo vsite.lo wall.lo wnblist.lo csettle.lo clincs.lo qmmm.lo gmx_fft.lo gmx_parallel_3dfft.lo gmx_wallcycle.lo qm_gaussian.lo gmx_fft_fftw3.lo ../gmxlib/libgmx.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -inst-prefix-dir /usr/src/tmp/gromacs-buildroot) x86_64-alt-linux-gcc -shared .libs/calcmu.o .libs/calcvir.o .libs/constr.o .libs/coupling.o .libs/domdec.o .libs/domdec_con.o .libs/domdec_network.o .libs/domdec_setup.o .libs/domdec_top.o .libs/ebin.o .libs/edsam.o .libs/ewald.o .libs/fftgrid.o .libs/force.o .libs/ghat.o .libs/init.o .libs/mdatom.o .libs/mdebin.o .libs/minimize.o .libs/mvxvf.o .libs/ns.o .libs/nsgrid.o .libs/perf_est.o .libs/pme.o .libs/pme_pp.o .libs/pppm.o .libs/partdec.o .libs/pull.o .libs/pullutil.o .libs/rf_util.o .libs/shakef.o .libs/sim_util.o .libs/shellfc.o .libs/stat.o .libs/tables.o .libs/tgroup.o .libs/update.o .libs/vcm.o .libs/vsite.o .libs/wall.o .libs/wnblist.o .libs/csettle.o .libs/clincs.o .libs/qmmm.o .libs/gmx_fft.o .libs/gmx_parallel_3dfft.o .libs/gmx_wallcycle.o .libs/qm_gaussian.o .libs/gmx_fft_fftw3.o -lgslcblas -L/usr/src/tmp/gromacs-buildroot/usr/lib64 -L/usr/lib64 -lgmx -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libmd.so.5 -o .libs/libmd.so.5.0.0 /bin/install -p .libs/libmd.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libmd.so.5.0.0 libmd.so.5 || { rm -f libmd.so.5 && ln -s libmd.so.5.0.0 libmd.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libmd.so.5.0.0 libmd.so || { rm -f libmd.so && ln -s libmd.so.5.0.0 libmd.so; }; }) /bin/install -p .libs/libmd.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' make install-exec-hook make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib' make[4]: Nothing to be done for `install-exec-hook'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib' make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib' Making install in kernel make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/kernel' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/kernel' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p grompp mdrun tpbconv pdb2gmx protonate luck gmxdump gmxcheck x2top '/usr/src/tmp/gromacs-buildroot/usr/bin' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/grompp /usr/src/tmp/gromacs-buildroot/usr/bin/grompp libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/mdrun /usr/src/tmp/gromacs-buildroot/usr/bin/mdrun libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/tpbconv /usr/src/tmp/gromacs-buildroot/usr/bin/tpbconv libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/pdb2gmx /usr/src/tmp/gromacs-buildroot/usr/bin/pdb2gmx libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/protonate /usr/src/tmp/gromacs-buildroot/usr/bin/protonate libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/luck /usr/src/tmp/gromacs-buildroot/usr/bin/luck libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/gmxdump /usr/src/tmp/gromacs-buildroot/usr/bin/gmxdump libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/gmxcheck /usr/src/tmp/gromacs-buildroot/usr/bin/gmxcheck libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/x2top /usr/src/tmp/gromacs-buildroot/usr/bin/x2top make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/kernel' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/kernel' Making install in tools make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/tools' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/tools' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libgmxana.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' libtool: install: warning: relinking `libgmxana.la' (cd /usr/src/RPM/BUILD/gromacs-4.0.7/single/src/tools; /bin/sh ../../libtool --tag=CC --mode=relink x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o libgmxana.la -rpath /usr/lib64 autocorr.lo expfit.lo polynomials.lo levenmar.lo anadih.lo pp2shift.lo dlist.lo eigio.lo lsq.lo cmat.lo eigensolver.lo nsc.lo hxprops.lo fitahx.lo gmx_analyze.lo gmx_anaeig.lo gmx_angle.lo gmx_bond.lo gmx_bundle.lo gmx_chi.lo gmx_cluster.lo gmx_confrms.lo gmx_covar.lo gmx_current.lo gmx_density.lo gmx_densmap.lo gmx_dih.lo gmx_dielectric.lo gmx_kinetics.lo gmx_spatial.lo gmx_dipoles.lo gmx_disre.lo gmx_dist.lo gmx_dyndom.lo gmx_enemat.lo gmx_energy.lo gmx_lie.lo gmx_filter.lo gmx_gyrate.lo gmx_h2order.lo gmx_hbond.lo gmx_helix.lo gmx_mindist.lo gmx_msd.lo gmx_morph.lo gmx_nmeig.lo gmx_nmens.lo gmx_order.lo gmx_principal.lo gmx_polystat.lo gmx_potential.lo gmx_rama.lo gmx_rdf.lo gmx_rms.lo gmx_rmsdist.lo gmx_rmsf.lo gmx_rotacf.lo gmx_saltbr.lo gmx_sas.lo gmx_sdf.lo gmx_sgangle.lo gmx_sorient.lo gmx_spol.lo gmx_tcaf.lo gmx_traj.lo gmx_velacc.lo gmx_helixorient.lo gmx_clustsize.lo gmx_mdmat.lo gmx_wham.lo correl.lo gmx_sham.lo gmx_nmtraj.lo gmx_trjconv.lo gmx_trjcat.lo gmx_trjorder.lo gmx_xpm2ps.lo gmx_editconf.lo gmx_genbox.lo gmx_genion.lo gmx_genconf.lo gmx_genpr.lo gmx_eneconv.lo gmx_vanhove.lo gmx_wheel.lo addconf.lo calcpot.lo edittop.lo ../gmxlib/libgmx.la ../mdlib/libmd.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -lmpi -lopen-pal -lopen-rte -inst-prefix-dir /usr/src/tmp/gromacs-buildroot) x86_64-alt-linux-gcc -shared .libs/autocorr.o .libs/expfit.o .libs/polynomials.o .libs/levenmar.o .libs/anadih.o .libs/pp2shift.o .libs/dlist.o .libs/eigio.o .libs/lsq.o .libs/cmat.o .libs/eigensolver.o .libs/nsc.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_analyze.o .libs/gmx_anaeig.o .libs/gmx_angle.o .libs/gmx_bond.o .libs/gmx_bundle.o .libs/gmx_chi.o .libs/gmx_cluster.o .libs/gmx_confrms.o .libs/gmx_covar.o .libs/gmx_current.o .libs/gmx_density.o .libs/gmx_densmap.o .libs/gmx_dih.o .libs/gmx_dielectric.o .libs/gmx_kinetics.o .libs/gmx_spatial.o .libs/gmx_dipoles.o .libs/gmx_disre.o .libs/gmx_dist.o .libs/gmx_dyndom.o .libs/gmx_enemat.o .libs/gmx_energy.o .libs/gmx_lie.o .libs/gmx_filter.o .libs/gmx_gyrate.o .libs/gmx_h2order.o .libs/gmx_hbond.o .libs/gmx_helix.o .libs/gmx_mindist.o .libs/gmx_msd.o .libs/gmx_morph.o .libs/gmx_nmeig.o .libs/gmx_nmens.o .libs/gmx_order.o .libs/gmx_principal.o .libs/gmx_polystat.o .libs/gmx_potential.o .libs/gmx_rama.o .libs/gmx_rdf.o .libs/gmx_rms.o .libs/gmx_rmsdist.o .libs/gmx_rmsf.o .libs/gmx_rotacf.o .libs/gmx_saltbr.o .libs/gmx_sas.o .libs/gmx_sdf.o .libs/gmx_sgangle.o .libs/gmx_sorient.o .libs/gmx_spol.o .libs/gmx_tcaf.o .libs/gmx_traj.o .libs/gmx_velacc.o .libs/gmx_helixorient.o .libs/gmx_clustsize.o .libs/gmx_mdmat.o .libs/gmx_wham.o .libs/correl.o .libs/gmx_sham.o .libs/gmx_nmtraj.o .libs/gmx_trjconv.o .libs/gmx_trjcat.o .libs/gmx_trjorder.o .libs/gmx_xpm2ps.o .libs/gmx_editconf.o .libs/gmx_genbox.o .libs/gmx_genion.o .libs/gmx_genconf.o .libs/gmx_genpr.o .libs/gmx_eneconv.o .libs/gmx_vanhove.o .libs/gmx_wheel.o .libs/addconf.o .libs/calcpot.o .libs/edittop.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs -L/usr/lib64/openmpi/lib -L/usr/src/tmp/gromacs-buildroot/usr/lib64 -L/usr/lib64 -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx -lmd -L/usr/src/tmp/gromacs-buildroot/usr/lib64/openmpi/lib -lmpi -lopen-pal -lopen-rte -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-Rpath:/usr/lib64/openmpi/lib -Wl,-soname -Wl,libgmxana.so.5 -o .libs/libgmxana.so.5.0.0 /bin/install -p .libs/libgmxana.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmxana.so.5.0.0 libgmxana.so.5 || { rm -f libgmxana.so.5 && ln -s libgmxana.so.5.0.0 libgmxana.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmxana.so.5.0.0 libgmxana.so || { rm -f libgmxana.so && ln -s libgmxana.so.5.0.0 libgmxana.so; }; }) /bin/install -p .libs/libgmxana.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p do_dssp editconf eneconv genbox genconf genrestr g_nmtraj make_ndx mk_angndx trjcat trjconv trjorder wheel xpm2ps genion anadock make_edi g_analyze g_anaeig g_angle g_bond g_bundle g_chi g_cluster g_confrms g_covar g_current g_density g_densmap g_dih g_dielectric g_helixorient g_principal g_dipoles g_disre g_dist g_dyndom g_enemat g_energy g_lie g_filter g_gyrate g_h2order g_hbond g_helix g_mindist g_msd g_morph g_nmeig g_nmens g_order g_polystat g_potential g_rama g_rdf g_rms g_rmsdist g_rmsf g_rotacf g_saltbr g_sas g_sgangle g_sham g_sorient g_spol g_sdf g_spatial g_tcaf g_traj g_vanhove g_velacc g_clustsize g_mdmat g_wham g_kinetics sigeps '/usr/src/tmp/gromacs-buildroot/usr/bin' libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/do_dssp /usr/src/tmp/gromacs-buildroot/usr/bin/do_dssp libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/editconf /usr/src/tmp/gromacs-buildroot/usr/bin/editconf libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/eneconv /usr/src/tmp/gromacs-buildroot/usr/bin/eneconv libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genbox /usr/src/tmp/gromacs-buildroot/usr/bin/genbox libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genconf /usr/src/tmp/gromacs-buildroot/usr/bin/genconf libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genrestr /usr/src/tmp/gromacs-buildroot/usr/bin/genrestr libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmtraj /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/make_ndx /usr/src/tmp/gromacs-buildroot/usr/bin/make_ndx libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/mk_angndx /usr/src/tmp/gromacs-buildroot/usr/bin/mk_angndx libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjcat /usr/src/tmp/gromacs-buildroot/usr/bin/trjcat libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjconv /usr/src/tmp/gromacs-buildroot/usr/bin/trjconv libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjorder /usr/src/tmp/gromacs-buildroot/usr/bin/trjorder libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/wheel /usr/src/tmp/gromacs-buildroot/usr/bin/wheel libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/xpm2ps /usr/src/tmp/gromacs-buildroot/usr/bin/xpm2ps libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genion /usr/src/tmp/gromacs-buildroot/usr/bin/genion libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/anadock /usr/src/tmp/gromacs-buildroot/usr/bin/anadock libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/make_edi /usr/src/tmp/gromacs-buildroot/usr/bin/make_edi libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_analyze /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_anaeig /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_angle /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_bond /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_bundle /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_chi /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_cluster /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_confrms /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_covar /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_current /usr/src/tmp/gromacs-buildroot/usr/bin/g_current libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_density /usr/src/tmp/gromacs-buildroot/usr/bin/g_density libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_densmap /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dih /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dielectric /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_helixorient /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_principal /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dipoles /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_disre /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dist /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dyndom /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_enemat /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_energy /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_lie /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_filter /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_gyrate /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_h2order /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_hbond /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_helix /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_mindist /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_msd /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_morph /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmeig /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmens /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_order /usr/src/tmp/gromacs-buildroot/usr/bin/g_order libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_polystat /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_potential /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rama /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rdf /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rms /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rmsdist /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rmsf /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rotacf /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_saltbr /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sas /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sgangle /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sham /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sorient /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_spol /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sdf /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_spatial /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_tcaf /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_traj /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_vanhove /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_velacc /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_clustsize /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_mdmat /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_wham /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_kinetics /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics libtool: install: warning: `libgmxana.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/gmxlib/.libs/libgmx.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/mdlib/.libs/libmd.la' has not been installed in `/usr/lib64' /bin/install -p .libs/sigeps /usr/src/tmp/gromacs-buildroot/usr/bin/sigeps make install-exec-hook make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/tools' libname="libgmxana"; \ nompi="`echo $libname | sed -e 's,_mpi,,'`"; \ libdir="/usr/lib64"; \ if echo $libname | grep mpi >/dev/null ; then \ (cd $libdir && test -e $libname.a -a ! -e $nompi.a && ln -s $libname.a $nompi.a ; exit 0); \ (cd $libdir && test -e $libname.so -a ! -e $nompi.so && ln -s $libname.so $nompi.so ; exit 0); \ fi; make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/tools' make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/tools' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/tools' Making install in ngmx make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/ngmx' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/ngmx' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p ngmx xrama highway '/usr/src/tmp/gromacs-buildroot/usr/bin' libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/ngmx /usr/src/tmp/gromacs-buildroot/usr/bin/ngmx libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/xrama /usr/src/tmp/gromacs-buildroot/usr/bin/xrama libtool: install: warning: `../mdlib/libmd.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx.la' has not been installed in `/usr/lib64' /bin/install -p .libs/highway /usr/src/tmp/gromacs-buildroot/usr/bin/highway make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/ngmx' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/ngmx' Making install in contrib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/contrib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/contrib' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/contrib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src/contrib' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/src' Making install in admin make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/admin' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/admin' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/admin' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/admin' Making install in scripts make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/scripts' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/scripts' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/install -p GMXRC GMXRC.csh GMXRC.bash GMXRC.zsh '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/install -p ../../scripts/completion.csh ../../scripts/completion.bash ../../scripts/completion.zsh ../../scripts/demux.pl ../../scripts/xplor2gmx.pl '/usr/src/tmp/gromacs-buildroot/usr/bin' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/scripts' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/scripts' Making install in share make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' Making install in top make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/top' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/top' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffgmx.itp ../../../share/top/ffgmxnb.itp ../../../share/top/ffgmxbon.itp ../../../share/top/ffgmx.atp ../../../share/top/ffgmx.hdb ../../../share/top/ffgmx.rtp ../../../share/top/ffgmx-c.tdb ../../../share/top/ffgmx-n.tdb ../../../share/top/ffgmx2.itp ../../../share/top/ffgmx2nb.itp ../../../share/top/ffgmx2bon.itp ../../../share/top/ffgmx2.atp ../../../share/top/ffgmx2.hdb ../../../share/top/ffgmx2.rtp ../../../share/top/ffgmx2-c.tdb ../../../share/top/ffgmx2-n.tdb ../../../share/top/ffG43a1.itp ../../../share/top/ffG43a1nb.itp ../../../share/top/ffG43a1bon.itp ../../../share/top/ffG43a1.atp ../../../share/top/ffG43a1.hdb ../../../share/top/ffG43a1.rtp ../../../share/top/ffG43a1-c.tdb ../../../share/top/ffG43a1-n.tdb ../../../share/top/ffG43a2.itp ../../../share/top/ffG43a2nb.itp ../../../share/top/ffG43a2bon.itp ../../../share/top/ffG43a2.atp ../../../share/top/ffG43a2.hdb ../../../share/top/ffG43a2.rtp ../../../share/top/ffG43a2-c.tdb ../../../share/top/ffG43a2-n.tdb ../../../share/top/ffgmx.ddb ../../../share/top/ffgmx2.ddb ../../../share/top/ffG43a1.ddb ../../../share/top/ffG43a2.ddb ../../../share/top/ffG45a3-c.tdb ../../../share/top/ffG45a3.atp ../../../share/top/ffG45a3.hdb ../../../share/top/ffG45a3.rtp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffG45a3nb.itp ../../../share/top/ffG45a3-n.tdb ../../../share/top/ffG45a3.ddb ../../../share/top/ffG45a3.itp ../../../share/top/ffG45a3bon.itp ../../../share/top/ffG53a5-c.tdb ../../../share/top/ffG53a5.atp ../../../share/top/ffG53a5.hdb ../../../share/top/ffG53a5.rtp ../../../share/top/ffG53a5nb.itp ../../../share/top/ffG53a5-n.tdb ../../../share/top/ffG53a5.ddb ../../../share/top/ffG53a5.itp ../../../share/top/ffG53a5bon.itp ../../../share/top/ffG53a5.n2t ../../../share/top/ffG53a6-c.tdb ../../../share/top/ffG53a6.atp ../../../share/top/ffG53a6.hdb ../../../share/top/ffG53a6.rtp ../../../share/top/ffG53a6nb.itp ../../../share/top/ffG53a6-n.tdb ../../../share/top/ffG53a6.ddb ../../../share/top/ffG53a6.itp ../../../share/top/ffG53a6bon.itp ../../../share/top/ffoplsaa.atp ../../../share/top/ffoplsaa.itp ../../../share/top/ffoplsaabon.itp ../../../share/top/ffoplsaanb.itp ../../../share/top/ffoplsaa.hdb ../../../share/top/ffoplsaa-n.tdb ../../../share/top/ffoplsaa-c.tdb ../../../share/top/ffoplsaa.rtp ../../../share/top/ffoplsaa.ddb ../../../share/top/ffoplsaa.n2t ../../../share/top/ffencads-c.tdb ../../../share/top/ffencads.itp ../../../share/top/ffencadv-c.tdb ../../../share/top/ffencadv.itp ../../../share/top/ffencads-n.tdb ../../../share/top/ffencads.rtp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffencadv-n.tdb ../../../share/top/ffencadv.rtp ../../../share/top/ffencads.atp ../../../share/top/ffencadsbon.itp ../../../share/top/ffencadv.atp ../../../share/top/ffencadvbon.itp ../../../share/top/ffencads.hdb ../../../share/top/ffencadsnb.itp ../../../share/top/ffencadv.hdb ../../../share/top/ffencadvnb.itp ../../../share/top/1mlg.itp ../../../share/top/2mlg.itp ../../../share/top/benzamide.itp ../../../share/top/bondadd.itp ../../../share/top/buck.itp ../../../share/top/decane.itp ../../../share/top/dlg.itp ../../../share/top/dmso.itp ../../../share/top/fa.itp ../../../share/top/ff_dum.itp ../../../share/top/flexspc.itp ../../../share/top/flexspce.itp ../../../share/top/flexwat-ferguson.itp ../../../share/top/h2p4o13.itp ../../../share/top/h2p8o25.itp ../../../share/top/h2po4.itp ../../../share/top/ions.itp ../../../share/top/methanol.itp ../../../share/top/spc.itp ../../../share/top/spce.itp ../../../share/top/tfe.itp ../../../share/top/tip3p.itp ../../../share/top/tip4p.itp ../../../share/top/urea.itp ../../../share/top/dgsolv.dat ../../../share/top/electroneg.dat ../../../share/top/dec50.gro ../../../share/top/dmso.gro ../../../share/top/spc216.gro ../../../share/top/tip4p.gro '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/urea+h2o.gro ../../../share/top/f3c.itp ../../../share/top/aminoacids.dat ../../../share/top/atommass.dat ../../../share/top/bromacs.dat ../../../share/top/ca-shift.dat ../../../share/top/cb-shift.dat ../../../share/top/co-shift.dat ../../../share/top/edissoc.dat ../../../share/top/FF.dat ../../../share/top/gurgle.dat ../../../share/top/ha-shift.dat ../../../share/top/links.dat ../../../share/top/phbres.dat ../../../share/top/random.dat ../../../share/top/refi_aa.dat ../../../share/top/specbond.dat ../../../share/top/surface.dat ../../../share/top/vdwradii.dat ../../../share/top/xlateat.dat ../../../share/top/highway.dat ../../../share/top/export.dlg ../../../share/top/bonds.dlg ../../../share/top/ss.map ../../../share/top/ps.m2p ../../../share/top/table6-10.xvg ../../../share/top/table6-11.xvg ../../../share/top/table6-12.xvg ../../../share/top/table6-8.xvg ../../../share/top/table6-9.xvg ../../../share/top/atom_nom.tbl ../../../share/top/gromacs.dtd ../../../share/top/tip5p.gro ../../../share/top/tip5p.itp ../../../share/top/sw.itp ../../../share/top/elements.dat '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/top' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/top' Making install in tutor make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' Making install in nmr1 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr1' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr1' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr1' /bin/install -p -m 644 ../../../../share/tutor/nmr1/conf.gro ../../../../share/tutor/nmr1/grompp.mdp ../../../../share/tutor/nmr1/pep.pdb ../../../../share/tutor/nmr1/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr1' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr1' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr1' Making install in nmr2 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr2' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr2' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr2' /bin/install -p -m 644 ../../../../share/tutor/nmr2/conf.gro ../../../../share/tutor/nmr2/genconf.gcp ../../../../share/tutor/nmr2/grompp.mdp ../../../../share/tutor/nmr2/pep.pdb ../../../../share/tutor/nmr2/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr2' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr2' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/nmr2' Making install in speptide make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/speptide' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/speptide' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/speptide' /bin/install -p -m 644 ../../../../share/tutor/speptide/em.mdp ../../../../share/tutor/speptide/full.mdp ../../../../share/tutor/speptide/pr.mdp ../../../../share/tutor/speptide/speptide.pdb '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/speptide' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/speptide' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/speptide' Making install in water make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/water' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/water' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/water' /bin/install -p -m 644 ../../../../share/tutor/water/index.ndx ../../../../share/tutor/water/conf.gro ../../../../share/tutor/water/spc216.pdb ../../../../share/tutor/water/grompp.mdp ../../../../share/tutor/water/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/water' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/water' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/water' Making install in gmxdemo make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/gmxdemo' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/gmxdemo' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/install -p -m 644 ../../../../share/tutor/gmxdemo/cpeptide.pdb '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/install -p ../../../../share/tutor/gmxdemo/demo '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/gmxdemo' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/gmxdemo' Making install in methanol make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/methanol' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/methanol' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/methanol' /bin/install -p -m 644 ../../../../share/tutor/methanol/index.ndx ../../../../share/tutor/methanol/conf.gro ../../../../share/tutor/methanol/methanol.pdb ../../../../share/tutor/methanol/grompp.mdp ../../../../share/tutor/methanol/topol.top ../../../../share/tutor/methanol/methanol.itp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/methanol' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/methanol' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/methanol' Making install in mixed make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/mixed' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/mixed' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/mixed' /bin/install -p -m 644 ../../../../share/tutor/mixed/index.ndx ../../../../share/tutor/mixed/conf.gro ../../../../share/tutor/mixed/mixed.pdb ../../../../share/tutor/mixed/grompp.mdp ../../../../share/tutor/mixed/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/mixed' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/mixed' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor/mixed' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/tutor' Making install in template make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/template' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/template' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/template' /bin/install -p -m 644 ../../../share/template/template.c ../../../share/template/README Makefile.x86_64-alt-linux-gnu '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/template' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/template' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/template' Making install in html make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' Making install in . make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html' /bin/install -p -m 644 ../../../share/html/online.html ../../../share/html/gmxfaq.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' Making install in images make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/images' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/images' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/images' /bin/install -p -m 644 ../../../../share/html/images/features.gif ../../../../share/html/images/flow_leftrightup.gif ../../../../share/html/images/flow_vrule.gif ../../../../share/html/images/flow_down.gif ../../../../share/html/images/flow_leftup.gif ../../../../share/html/images/links.gif ../../../../share/html/images/articles.gif ../../../../share/html/images/flow_downleft.gif ../../../../share/html/images/flow_right+left.gif ../../../../share/html/images/mail.gif ../../../../share/html/images/bench.gif ../../../../share/html/images/flow_hline.gif ../../../../share/html/images/flow_right.gif ../../../../share/html/images/manual.gif ../../../../share/html/images/charts_down.gif ../../../../share/html/images/flow_left.gif ../../../../share/html/images/flow_rightleftdown.gif ../../../../share/html/images/gmxlogo_small.jpg ../../../../share/html/images/charts_up.gif ../../../../share/html/images/flow_leftright.gif ../../../../share/html/images/flow_uprightleft.gif ../../../../share/html/images/software.gif ../../../../share/html/images/faq.gif ../../../../share/html/images/flow_leftrightdown.gif ../../../../share/html/images/flow_vline.gif ../../../../share/html/images/topologies.gif ../../../../share/html/images/plotje.gif ../../../../share/html/images/xvgr.gif ../../../../share/html/images/1ctf-0.jpg ../../../../share/html/images/1ctf-0.2.jpg ../../../../share/html/images/1ctf-0.5.jpg ../../../../share/html/images/1ctf-1.jpg ../../../../share/html/images/1ctf-4.jpg ../../../../share/html/images/1ctf-10.jpg '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/images' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/images' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/images' Making install in online make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/online' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/online' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/cpt.html ../../../../share/html/online/dat.html ../../../../share/html/online/g_disre.html ../../../../share/html/online/g_sorient.html ../../../../share/html/online/ndx.html ../../../../share/html/online/dlg.html ../../../../share/html/online/g_dist.html ../../../../share/html/online/g_tcaf.html ../../../../share/html/online/ngmx.html ../../../../share/html/online/do_dssp.html ../../../../share/html/online/g_dyndom.html ../../../../share/html/online/g_traj.html ../../../../share/html/online/edi.html ../../../../share/html/online/g_enemat.html ../../../../share/html/online/g_velacc.html ../../../../share/html/online/options.html ../../../../share/html/online/editconf.html ../../../../share/html/online/g_energy.html ../../../../share/html/online/genbox.html ../../../../share/html/online/out.html ../../../../share/html/online/edo.html ../../../../share/html/online/g_gyrate.html ../../../../share/html/online/genconf.html ../../../../share/html/online/pdb.html ../../../../share/html/online/edr.html ../../../../share/html/online/g_h2order.html ../../../../share/html/online/genion.html ../../../../share/html/online/pdb2gmx.html ../../../../share/html/online/ene.html ../../../../share/html/online/g_hbond.html ../../../../share/html/online/genpr.html ../../../../share/html/online/protonate.html ../../../../share/html/online/eneconv.html ../../../../share/html/online/g_helix.html ../../../../share/html/online/getting_started.html ../../../../share/html/online/rtp.html ../../../../share/html/online/eps.html ../../../../share/html/online/g_lie.html ../../../../share/html/online/gmxcheck.html ../../../../share/html/online/tex.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/files.html ../../../../share/html/online/g_mdmat.html ../../../../share/html/online/gmxdump.html ../../../../share/html/online/top.html ../../../../share/html/online/flow.html ../../../../share/html/online/g_mindist.html ../../../../share/html/online/gro.html ../../../../share/html/online/tpa.html ../../../../share/html/online/g87.html ../../../../share/html/online/g_morph.html ../../../../share/html/online/grompp.html ../../../../share/html/online/tpb.html ../../../../share/html/online/g96.html ../../../../share/html/online/g_msd.html ../../../../share/html/online/hat.html ../../../../share/html/online/tpbconv.html ../../../../share/html/online/g_anaeig.html ../../../../share/html/online/g_nmeig.html ../../../../share/html/online/highway.html ../../../../share/html/online/tpr.html ../../../../share/html/online/g_analyze.html ../../../../share/html/online/g_nmens.html ../../../../share/html/online/include_bot.html ../../../../share/html/online/trj.html ../../../../share/html/online/g_angle.html ../../../../share/html/online/g_order.html ../../../../share/html/online/include_top.html ../../../../share/html/online/trjcat.html ../../../../share/html/online/g_bond.html ../../../../share/html/online/g_potential.html ../../../../share/html/online/itp.html ../../../../share/html/online/trjconv.html ../../../../share/html/online/g_bundle.html ../../../../share/html/online/g_rama.html ../../../../share/html/online/log.html ../../../../share/html/online/trjorder.html ../../../../share/html/online/g_chi.html ../../../../share/html/online/g_rdf.html ../../../../share/html/online/m2p.html ../../../../share/html/online/trr.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/g_cluster.html ../../../../share/html/online/g_rms.html ../../../../share/html/online/make_ndx.html ../../../../share/html/online/wheel.html ../../../../share/html/online/g_confrms.html ../../../../share/html/online/g_rmsdist.html ../../../../share/html/online/map.html ../../../../share/html/online/x2top.html ../../../../share/html/online/g_covar.html ../../../../share/html/online/g_rmsf.html ../../../../share/html/online/mdp.html ../../../../share/html/online/xpm.html ../../../../share/html/online/g_density.html ../../../../share/html/online/g_rotacf.html ../../../../share/html/online/mdp_opt.html ../../../../share/html/online/xpm2ps.html ../../../../share/html/online/g_dielectric.html ../../../../share/html/online/g_saltbr.html ../../../../share/html/online/mdrun.html ../../../../share/html/online/xrama.html ../../../../share/html/online/g_dih.html ../../../../share/html/online/g_sas.html ../../../../share/html/online/mk_angndx.html ../../../../share/html/online/xtc.html ../../../../share/html/online/g_dipoles.html ../../../../share/html/online/g_sgangle.html ../../../../share/html/online/mtx.html ../../../../share/html/online/xvg.html ../../../../share/html/online/g_densmap.html ../../../../share/html/online/g_sham.html ../../../../share/html/online/make_edi.html ../../../../share/html/online/style.css ../../../../share/html/online/water.html ../../../../share/html/online/gmxdemo.html ../../../../share/html/online/speptide.html ../../../../share/html/online/yourown.html ../../../../share/html/online/methanol.html ../../../../share/html/online/mixed.html ../../../../share/html/online/protunf.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/online' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html/online' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share/html' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/share' Making install in man make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' Making install in man1 make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man/man1' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man/man1' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1' /bin/install -p -m 644 ../../../man/man1/anadock.1 ../../../man/man1/do_dssp.1 ../../../man/man1/editconf.1 ../../../man/man1/eneconv.1 ../../../man/man1/g_anaeig.1 ../../../man/man1/g_analyze.1 ../../../man/man1/g_angle.1 ../../../man/man1/g_bond.1 ../../../man/man1/g_bundle.1 ../../../man/man1/g_chi.1 ../../../man/man1/g_cluster.1 ../../../man/man1/g_clustsize.1 ../../../man/man1/g_confrms.1 ../../../man/man1/g_covar.1 ../../../man/man1/g_current.1 ../../../man/man1/g_density.1 ../../../man/man1/g_densmap.1 ../../../man/man1/g_dielectric.1 ../../../man/man1/g_dih.1 ../../../man/man1/g_dipoles.1 ../../../man/man1/g_disre.1 ../../../man/man1/g_dist.1 ../../../man/man1/g_dyndom.1 ../../../man/man1/g_enemat.1 ../../../man/man1/g_energy.1 ../../../man/man1/g_filter.1 ../../../man/man1/g_gyrate.1 ../../../man/man1/g_h2order.1 ../../../man/man1/g_hbond.1 ../../../man/man1/g_helix.1 ../../../man/man1/g_helixorient.1 ../../../man/man1/g_kinetics.1 ../../../man/man1/g_lie.1 ../../../man/man1/g_mdmat.1 ../../../man/man1/g_mindist.1 ../../../man/man1/g_morph.1 ../../../man/man1/g_msd.1 ../../../man/man1/g_nmeig.1 ../../../man/man1/g_nmens.1 ../../../man/man1/g_nmtraj.1 '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1' /bin/install -p -m 644 ../../../man/man1/g_order.1 ../../../man/man1/g_polystat.1 ../../../man/man1/g_potential.1 ../../../man/man1/g_principal.1 ../../../man/man1/g_rama.1 ../../../man/man1/g_rdf.1 ../../../man/man1/g_rms.1 ../../../man/man1/g_rmsdist.1 ../../../man/man1/g_rmsf.1 ../../../man/man1/g_rotacf.1 ../../../man/man1/g_saltbr.1 ../../../man/man1/g_sas.1 ../../../man/man1/g_sdf.1 ../../../man/man1/g_sgangle.1 ../../../man/man1/g_sham.1 ../../../man/man1/g_sorient.1 ../../../man/man1/g_spatial.1 ../../../man/man1/g_spol.1 ../../../man/man1/g_tcaf.1 ../../../man/man1/g_traj.1 ../../../man/man1/g_vanhove.1 ../../../man/man1/g_velacc.1 ../../../man/man1/g_wham.1 ../../../man/man1/gen_table.1 ../../../man/man1/genbox.1 ../../../man/man1/genconf.1 ../../../man/man1/genion.1 ../../../man/man1/genrestr.1 ../../../man/man1/gmxcheck.1 ../../../man/man1/gmxdump.1 ../../../man/man1/grompp.1 ../../../man/man1/highway.1 ../../../man/man1/make_edi.1 ../../../man/man1/make_ndx.1 ../../../man/man1/mdrun.1 ../../../man/man1/mk_angndx.1 ../../../man/man1/ngmx.1 ../../../man/man1/pdb2gmx.1 ../../../man/man1/protonate.1 ../../../man/man1/sigeps.1 '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1' /bin/install -p -m 644 ../../../man/man1/tpbconv.1 ../../../man/man1/trjcat.1 ../../../man/man1/trjconv.1 ../../../man/man1/trjorder.1 ../../../man/man1/wheel.1 ../../../man/man1/x2top.1 ../../../man/man1/xpm2ps.1 ../../../man/man1/xrama.1 '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man/man1' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man/man1' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single/man' make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' make install-exec-hook make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' GROMACS is installed under /usr. Make sure to update your PATH and MANPATH to find the programs and unix manual pages, and possibly LD_LIBRARY_PATH or /etc/ld.so.conf if you are using dynamic libraries. Please run "make tests" now to verify your installation. If you want links to the executables in /usr/local/bin, you can issue "make links" now. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' make: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/single' + popd ~/RPM/BUILD/gromacs-4.0.7 + pushd double ~/RPM/BUILD/gromacs-4.0.7/double ~/RPM/BUILD/gromacs-4.0.7 + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/gromacs-buildroot make: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' Making install in include make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' Making install in . make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/3dview.h ../../include/assert.h ../../include/atomprop.h ../../include/bondf.h ../../include/calcgrid.h ../../include/calch.h ../../include/calcmu.h ../../include/checkpoint.h ../../include/confio.h ../../include/constr.h ../../include/copyrite.h ../../include/coulomb.h ../../include/dihre.h ../../include/disre.h ../../include/domdec.h ../../include/domdec_network.h ../../include/do_fit.h ../../include/ebin.h ../../include/edsam.h ../../include/enxio.h ../../include/gmx_fatal.h ../../include/ffscanf.h ../../include/fftgrid.h ../../include/filenm.h ../../include/force.h ../../include/futil.h ../../include/gbutil.h ../../include/gmx_ana.h ../../include/gmx_arpack.h ../../include/gmx_blas.h ../../include/gmxcomplex.h ../../include/gmx_cyclecounter.h ../../include/gmxfio.h ../../include/gmx_fft.h ../../include/gmx_lapack.h ../../include/gmx_random.h ../../include/gmx_parallel_3dfft.h ../../include/gmx_system_xdr.h ../../include/gmx_thread.h ../../include/gmx_wallcycle.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/gpp_atomtype.h ../../include/gpp_nextnb.h ../../include/grompp.h ../../include/gstat.h ../../include/index.h ../../include/invblock.h ../../include/macros.h ../../include/magic.h ../../include/main.h ../../include/maths.h ../../include/matio.h ../../include/mdatoms.h ../../include/mdebin.h ../../include/mdrun.h ../../include/mpelogging.h ../../include/mshift.h ../../include/mtop_util.h ../../include/mtxio.h ../../include/mvdata.h ../../include/names.h ../../include/network.h ../../include/nonbonded.h ../../include/nrama.h ../../include/nrjac.h ../../include/nrnb.h ../../include/nsgrid.h ../../include/ns.h ../../include/orires.h ../../include/partdec.h ../../include/pbc.h ../../include/pdbio.h ../../include/pdebug.h ../../include/perf_est.h ../../include/physics.h ../../include/pme.h ../../include/pppm.h ../../include/princ.h ../../include/pull.h ../../include/qmmm.h ../../include/random.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/rbin.h ../../include/rdgroup.h ../../include/readcomp.h ../../include/readinp.h ../../include/reorder.h ../../include/rmpbc.h ../../include/shellfc.h ../../include/shift.h ../../include/smalloc.h ../../include/sortwater.h ../../include/sparsematrix.h ../../include/split.h ../../include/splitter.h ../../include/statusio.h ../../include/statutil.h ../../include/strdb.h ../../include/string2.h ../../include/struc2.h ../../include/symtab.h ../../include/sysstuff.h ../../include/tags.h ../../include/tgroup.h ../../include/topsort.h ../../include/tpxio.h ../../include/transfer.h ../../include/trnio.h ../../include/txtdump.h ../../include/typedefs.h ../../include/update.h ../../include/utils.h ../../include/vcm.h ../../include/vec.h ../../include/viewit.h ../../include/vsite.h ../../include/wgms.h ../../include/wman.h ../../include/writeps.h ../../include/xdrf.h ../../include/xtcio.h ../../include/xvgr.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' Making install in types make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include/types' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include/types' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs/types' /bin/install -p -m 644 ../../../include/types/atoms.h ../../../include/types/forcerec.h ../../../include/types/ifunc.h ../../../include/types/mdatom.h ../../../include/types/simple.h ../../../include/types/block.h ../../../include/types/constr.h ../../../include/types/energy.h ../../../include/types/graph.h ../../../include/types/inputrec.h ../../../include/types/nblist.h ../../../include/types/ns.h ../../../include/types/nsgrid.h ../../../include/types/symtab.h ../../../include/types/commrec.h ../../../include/types/enums.h ../../../include/types/group.h ../../../include/types/ishift.h ../../../include/types/nbslist.h ../../../include/types/topology.h ../../../include/types/fcdata.h ../../../include/types/filenm.h ../../../include/types/idef.h ../../../include/types/matrix.h ../../../include/types/nrnb.h ../../../include/types/trx.h ../../../include/types/state.h ../../../include/types/pbc.h ../../../include/types/qmmmrec.h ../../../include/types/shellfc.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs/types' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include/types' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include/types' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/include' Making install in src make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' Making install in gmxlib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' Making install in nonbonded make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' Making install in nb_kernel_x86_64_sse2 make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' Making install in nb_kernel make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' make install-am make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' make[6]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded/nb_kernel' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/nonbonded' Making install in gmx_blas make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_blas' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_blas' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_blas' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_blas' Making install in gmx_lapack make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_lapack' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_lapack' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_lapack' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/gmx_lapack' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libgmx_d.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/install -p .libs/libgmx_d.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_d.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmx_d.so.5.0.0 libgmx_d.so.5 || { rm -f libgmx_d.so.5 && ln -s libgmx_d.so.5.0.0 libgmx_d.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmx_d.so.5.0.0 libgmx_d.so || { rm -f libgmx_d.so && ln -s libgmx_d.so.5.0.0 libgmx_d.so; }; }) /bin/install -p .libs/libgmx_d.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_d.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib' Making install in mdlib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libmd_d.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' libtool: install: warning: relinking `libmd_d.la' (cd /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib; /bin/sh ../../libtool --tag=CC --mode=relink x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libmd_d.la -rpath /usr/lib64 calcmu.lo calcvir.lo constr.lo coupling.lo domdec.lo domdec_con.lo domdec_network.lo domdec_setup.lo domdec_top.lo ebin.lo edsam.lo ewald.lo fftgrid.lo force.lo ghat.lo init.lo mdatom.lo mdebin.lo minimize.lo mvxvf.lo ns.lo nsgrid.lo perf_est.lo pme.lo pme_pp.lo pppm.lo partdec.lo pull.lo pullutil.lo rf_util.lo shakef.lo sim_util.lo shellfc.lo stat.lo tables.lo tgroup.lo update.lo vcm.lo vsite.lo wall.lo wnblist.lo csettle.lo clincs.lo qmmm.lo gmx_fft.lo gmx_parallel_3dfft.lo gmx_wallcycle.lo qm_gaussian.lo gmx_fft_fftw3.lo ../gmxlib/libgmx_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -inst-prefix-dir /usr/src/tmp/gromacs-buildroot) x86_64-alt-linux-gcc -shared .libs/calcmu.o .libs/calcvir.o .libs/constr.o .libs/coupling.o .libs/domdec.o .libs/domdec_con.o .libs/domdec_network.o .libs/domdec_setup.o .libs/domdec_top.o .libs/ebin.o .libs/edsam.o .libs/ewald.o .libs/fftgrid.o .libs/force.o .libs/ghat.o .libs/init.o .libs/mdatom.o .libs/mdebin.o .libs/minimize.o .libs/mvxvf.o .libs/ns.o .libs/nsgrid.o .libs/perf_est.o .libs/pme.o .libs/pme_pp.o .libs/pppm.o .libs/partdec.o .libs/pull.o .libs/pullutil.o .libs/rf_util.o .libs/shakef.o .libs/sim_util.o .libs/shellfc.o .libs/stat.o .libs/tables.o .libs/tgroup.o .libs/update.o .libs/vcm.o .libs/vsite.o .libs/wall.o .libs/wnblist.o .libs/csettle.o .libs/clincs.o .libs/qmmm.o .libs/gmx_fft.o .libs/gmx_parallel_3dfft.o .libs/gmx_wallcycle.o .libs/qm_gaussian.o .libs/gmx_fft_fftw3.o -lgslcblas -L/usr/src/tmp/gromacs-buildroot/usr/lib64 -L/usr/lib64 -lgmx_d -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libmd_d.so.5 -o .libs/libmd_d.so.5.0.0 /bin/install -p .libs/libmd_d.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_d.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libmd_d.so.5.0.0 libmd_d.so.5 || { rm -f libmd_d.so.5 && ln -s libmd_d.so.5.0.0 libmd_d.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libmd_d.so.5.0.0 libmd_d.so || { rm -f libmd_d.so && ln -s libmd_d.so.5.0.0 libmd_d.so; }; }) /bin/install -p .libs/libmd_d.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_d.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' make install-exec-hook make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib' make[4]: Nothing to be done for `install-exec-hook'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib' make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib' Making install in kernel make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/kernel' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/kernel' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p grompp '/usr/src/tmp/gromacs-buildroot/usr/bin/./grompp_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/grompp /usr/src/tmp/gromacs-buildroot/usr/bin/./grompp_d /bin/sh ../../libtool --mode=install /bin/install -p mdrun '/usr/src/tmp/gromacs-buildroot/usr/bin/./mdrun_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/mdrun /usr/src/tmp/gromacs-buildroot/usr/bin/./mdrun_d /bin/sh ../../libtool --mode=install /bin/install -p tpbconv '/usr/src/tmp/gromacs-buildroot/usr/bin/./tpbconv_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/tpbconv /usr/src/tmp/gromacs-buildroot/usr/bin/./tpbconv_d /bin/sh ../../libtool --mode=install /bin/install -p pdb2gmx '/usr/src/tmp/gromacs-buildroot/usr/bin/./pdb2gmx_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/pdb2gmx /usr/src/tmp/gromacs-buildroot/usr/bin/./pdb2gmx_d /bin/sh ../../libtool --mode=install /bin/install -p protonate '/usr/src/tmp/gromacs-buildroot/usr/bin/./protonate_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/protonate /usr/src/tmp/gromacs-buildroot/usr/bin/./protonate_d /bin/sh ../../libtool --mode=install /bin/install -p luck '/usr/src/tmp/gromacs-buildroot/usr/bin/./luck_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/luck /usr/src/tmp/gromacs-buildroot/usr/bin/./luck_d /bin/sh ../../libtool --mode=install /bin/install -p gmxdump '/usr/src/tmp/gromacs-buildroot/usr/bin/./gmxdump_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/gmxdump /usr/src/tmp/gromacs-buildroot/usr/bin/./gmxdump_d /bin/sh ../../libtool --mode=install /bin/install -p gmxcheck '/usr/src/tmp/gromacs-buildroot/usr/bin/./gmxcheck_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/gmxcheck /usr/src/tmp/gromacs-buildroot/usr/bin/./gmxcheck_d /bin/sh ../../libtool --mode=install /bin/install -p x2top '/usr/src/tmp/gromacs-buildroot/usr/bin/./x2top_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/x2top /usr/src/tmp/gromacs-buildroot/usr/bin/./x2top_d make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/kernel' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/kernel' Making install in tools make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/tools' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/tools' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libgmxana_d.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' libtool: install: warning: relinking `libgmxana_d.la' (cd /usr/src/RPM/BUILD/gromacs-4.0.7/double/src/tools; /bin/sh ../../libtool --tag=CC --mode=relink x86_64-alt-linux-gcc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o libgmxana_d.la -rpath /usr/lib64 autocorr.lo expfit.lo polynomials.lo levenmar.lo anadih.lo pp2shift.lo dlist.lo eigio.lo lsq.lo cmat.lo eigensolver.lo nsc.lo hxprops.lo fitahx.lo gmx_analyze.lo gmx_anaeig.lo gmx_angle.lo gmx_bond.lo gmx_bundle.lo gmx_chi.lo gmx_cluster.lo gmx_confrms.lo gmx_covar.lo gmx_current.lo gmx_density.lo gmx_densmap.lo gmx_dih.lo gmx_dielectric.lo gmx_kinetics.lo gmx_spatial.lo gmx_dipoles.lo gmx_disre.lo gmx_dist.lo gmx_dyndom.lo gmx_enemat.lo gmx_energy.lo gmx_lie.lo gmx_filter.lo gmx_gyrate.lo gmx_h2order.lo gmx_hbond.lo gmx_helix.lo gmx_mindist.lo gmx_msd.lo gmx_morph.lo gmx_nmeig.lo gmx_nmens.lo gmx_order.lo gmx_principal.lo gmx_polystat.lo gmx_potential.lo gmx_rama.lo gmx_rdf.lo gmx_rms.lo gmx_rmsdist.lo gmx_rmsf.lo gmx_rotacf.lo gmx_saltbr.lo gmx_sas.lo gmx_sdf.lo gmx_sgangle.lo gmx_sorient.lo gmx_spol.lo gmx_tcaf.lo gmx_traj.lo gmx_velacc.lo gmx_helixorient.lo gmx_clustsize.lo gmx_mdmat.lo gmx_wham.lo correl.lo gmx_sham.lo gmx_nmtraj.lo gmx_trjconv.lo gmx_trjcat.lo gmx_trjorder.lo gmx_xpm2ps.lo gmx_editconf.lo gmx_genbox.lo gmx_genion.lo gmx_genconf.lo gmx_genpr.lo gmx_eneconv.lo gmx_vanhove.lo gmx_wheel.lo addconf.lo calcpot.lo edittop.lo ../gmxlib/libgmx_d.la ../mdlib/libmd_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -lmpi -lopen-pal -lopen-rte -inst-prefix-dir /usr/src/tmp/gromacs-buildroot) x86_64-alt-linux-gcc -shared .libs/autocorr.o .libs/expfit.o .libs/polynomials.o .libs/levenmar.o .libs/anadih.o .libs/pp2shift.o .libs/dlist.o .libs/eigio.o .libs/lsq.o .libs/cmat.o .libs/eigensolver.o .libs/nsc.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_analyze.o .libs/gmx_anaeig.o .libs/gmx_angle.o .libs/gmx_bond.o .libs/gmx_bundle.o .libs/gmx_chi.o .libs/gmx_cluster.o .libs/gmx_confrms.o .libs/gmx_covar.o .libs/gmx_current.o .libs/gmx_density.o .libs/gmx_densmap.o .libs/gmx_dih.o .libs/gmx_dielectric.o .libs/gmx_kinetics.o .libs/gmx_spatial.o .libs/gmx_dipoles.o .libs/gmx_disre.o .libs/gmx_dist.o .libs/gmx_dyndom.o .libs/gmx_enemat.o .libs/gmx_energy.o .libs/gmx_lie.o .libs/gmx_filter.o .libs/gmx_gyrate.o .libs/gmx_h2order.o .libs/gmx_hbond.o .libs/gmx_helix.o .libs/gmx_mindist.o .libs/gmx_msd.o .libs/gmx_morph.o .libs/gmx_nmeig.o .libs/gmx_nmens.o .libs/gmx_order.o .libs/gmx_principal.o .libs/gmx_polystat.o .libs/gmx_potential.o .libs/gmx_rama.o .libs/gmx_rdf.o .libs/gmx_rms.o .libs/gmx_rmsdist.o .libs/gmx_rmsf.o .libs/gmx_rotacf.o .libs/gmx_saltbr.o .libs/gmx_sas.o .libs/gmx_sdf.o .libs/gmx_sgangle.o .libs/gmx_sorient.o .libs/gmx_spol.o .libs/gmx_tcaf.o .libs/gmx_traj.o .libs/gmx_velacc.o .libs/gmx_helixorient.o .libs/gmx_clustsize.o .libs/gmx_mdmat.o .libs/gmx_wham.o .libs/correl.o .libs/gmx_sham.o .libs/gmx_nmtraj.o .libs/gmx_trjconv.o .libs/gmx_trjcat.o .libs/gmx_trjorder.o .libs/gmx_xpm2ps.o .libs/gmx_editconf.o .libs/gmx_genbox.o .libs/gmx_genion.o .libs/gmx_genconf.o .libs/gmx_genpr.o .libs/gmx_eneconv.o .libs/gmx_vanhove.o .libs/gmx_wheel.o .libs/addconf.o .libs/calcpot.o .libs/edittop.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs -L/usr/lib64/openmpi/lib -L/usr/src/tmp/gromacs-buildroot/usr/lib64 -L/usr/lib64 -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_d -lmd_d -L/usr/src/tmp/gromacs-buildroot/usr/lib64/openmpi/lib -lmpi -lopen-pal -lopen-rte -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-Rpath:/usr/lib64/openmpi/lib -Wl,-soname -Wl,libgmxana_d.so.5 -o .libs/libgmxana_d.so.5.0.0 /bin/install -p .libs/libgmxana_d.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmxana_d.so.5.0.0 libgmxana_d.so.5 || { rm -f libgmxana_d.so.5 && ln -s libgmxana_d.so.5.0.0 libgmxana_d.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmxana_d.so.5.0.0 libgmxana_d.so || { rm -f libgmxana_d.so && ln -s libgmxana_d.so.5.0.0 libgmxana_d.so; }; }) /bin/install -p .libs/libgmxana_d.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p do_dssp '/usr/src/tmp/gromacs-buildroot/usr/bin/./do_dssp_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/do_dssp /usr/src/tmp/gromacs-buildroot/usr/bin/./do_dssp_d /bin/sh ../../libtool --mode=install /bin/install -p editconf '/usr/src/tmp/gromacs-buildroot/usr/bin/./editconf_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/editconf /usr/src/tmp/gromacs-buildroot/usr/bin/./editconf_d /bin/sh ../../libtool --mode=install /bin/install -p eneconv '/usr/src/tmp/gromacs-buildroot/usr/bin/./eneconv_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/eneconv /usr/src/tmp/gromacs-buildroot/usr/bin/./eneconv_d /bin/sh ../../libtool --mode=install /bin/install -p genbox '/usr/src/tmp/gromacs-buildroot/usr/bin/./genbox_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genbox /usr/src/tmp/gromacs-buildroot/usr/bin/./genbox_d /bin/sh ../../libtool --mode=install /bin/install -p genconf '/usr/src/tmp/gromacs-buildroot/usr/bin/./genconf_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genconf /usr/src/tmp/gromacs-buildroot/usr/bin/./genconf_d /bin/sh ../../libtool --mode=install /bin/install -p genrestr '/usr/src/tmp/gromacs-buildroot/usr/bin/./genrestr_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genrestr /usr/src/tmp/gromacs-buildroot/usr/bin/./genrestr_d /bin/sh ../../libtool --mode=install /bin/install -p g_nmtraj '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmtraj_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmtraj /usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmtraj_d /bin/sh ../../libtool --mode=install /bin/install -p make_ndx '/usr/src/tmp/gromacs-buildroot/usr/bin/./make_ndx_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/make_ndx /usr/src/tmp/gromacs-buildroot/usr/bin/./make_ndx_d /bin/sh ../../libtool --mode=install /bin/install -p mk_angndx '/usr/src/tmp/gromacs-buildroot/usr/bin/./mk_angndx_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/mk_angndx /usr/src/tmp/gromacs-buildroot/usr/bin/./mk_angndx_d /bin/sh ../../libtool --mode=install /bin/install -p trjcat '/usr/src/tmp/gromacs-buildroot/usr/bin/./trjcat_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjcat /usr/src/tmp/gromacs-buildroot/usr/bin/./trjcat_d /bin/sh ../../libtool --mode=install /bin/install -p trjconv '/usr/src/tmp/gromacs-buildroot/usr/bin/./trjconv_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjconv /usr/src/tmp/gromacs-buildroot/usr/bin/./trjconv_d /bin/sh ../../libtool --mode=install /bin/install -p trjorder '/usr/src/tmp/gromacs-buildroot/usr/bin/./trjorder_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjorder /usr/src/tmp/gromacs-buildroot/usr/bin/./trjorder_d /bin/sh ../../libtool --mode=install /bin/install -p wheel '/usr/src/tmp/gromacs-buildroot/usr/bin/./wheel_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/wheel /usr/src/tmp/gromacs-buildroot/usr/bin/./wheel_d /bin/sh ../../libtool --mode=install /bin/install -p xpm2ps '/usr/src/tmp/gromacs-buildroot/usr/bin/./xpm2ps_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/xpm2ps /usr/src/tmp/gromacs-buildroot/usr/bin/./xpm2ps_d /bin/sh ../../libtool --mode=install /bin/install -p genion '/usr/src/tmp/gromacs-buildroot/usr/bin/./genion_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genion /usr/src/tmp/gromacs-buildroot/usr/bin/./genion_d /bin/sh ../../libtool --mode=install /bin/install -p anadock '/usr/src/tmp/gromacs-buildroot/usr/bin/./anadock_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/anadock /usr/src/tmp/gromacs-buildroot/usr/bin/./anadock_d /bin/sh ../../libtool --mode=install /bin/install -p make_edi '/usr/src/tmp/gromacs-buildroot/usr/bin/./make_edi_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/make_edi /usr/src/tmp/gromacs-buildroot/usr/bin/./make_edi_d /bin/sh ../../libtool --mode=install /bin/install -p g_analyze '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_analyze_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_analyze /usr/src/tmp/gromacs-buildroot/usr/bin/./g_analyze_d /bin/sh ../../libtool --mode=install /bin/install -p g_anaeig '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_anaeig_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_anaeig /usr/src/tmp/gromacs-buildroot/usr/bin/./g_anaeig_d /bin/sh ../../libtool --mode=install /bin/install -p g_angle '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_angle_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_angle /usr/src/tmp/gromacs-buildroot/usr/bin/./g_angle_d /bin/sh ../../libtool --mode=install /bin/install -p g_bond '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_bond_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_bond /usr/src/tmp/gromacs-buildroot/usr/bin/./g_bond_d /bin/sh ../../libtool --mode=install /bin/install -p g_bundle '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_bundle_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_bundle /usr/src/tmp/gromacs-buildroot/usr/bin/./g_bundle_d /bin/sh ../../libtool --mode=install /bin/install -p g_chi '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_chi_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_chi /usr/src/tmp/gromacs-buildroot/usr/bin/./g_chi_d /bin/sh ../../libtool --mode=install /bin/install -p g_cluster '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_cluster_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_cluster /usr/src/tmp/gromacs-buildroot/usr/bin/./g_cluster_d /bin/sh ../../libtool --mode=install /bin/install -p g_confrms '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_confrms_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_confrms /usr/src/tmp/gromacs-buildroot/usr/bin/./g_confrms_d /bin/sh ../../libtool --mode=install /bin/install -p g_covar '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_covar_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_covar /usr/src/tmp/gromacs-buildroot/usr/bin/./g_covar_d /bin/sh ../../libtool --mode=install /bin/install -p g_current '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_current_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_current /usr/src/tmp/gromacs-buildroot/usr/bin/./g_current_d /bin/sh ../../libtool --mode=install /bin/install -p g_density '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_density_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_density /usr/src/tmp/gromacs-buildroot/usr/bin/./g_density_d /bin/sh ../../libtool --mode=install /bin/install -p g_densmap '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_densmap_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_densmap /usr/src/tmp/gromacs-buildroot/usr/bin/./g_densmap_d /bin/sh ../../libtool --mode=install /bin/install -p g_dih '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dih_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dih /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dih_d /bin/sh ../../libtool --mode=install /bin/install -p g_dielectric '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dielectric_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dielectric /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dielectric_d /bin/sh ../../libtool --mode=install /bin/install -p g_helixorient '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_helixorient_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_helixorient /usr/src/tmp/gromacs-buildroot/usr/bin/./g_helixorient_d /bin/sh ../../libtool --mode=install /bin/install -p g_principal '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_principal_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_principal /usr/src/tmp/gromacs-buildroot/usr/bin/./g_principal_d /bin/sh ../../libtool --mode=install /bin/install -p g_dipoles '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dipoles_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dipoles /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dipoles_d /bin/sh ../../libtool --mode=install /bin/install -p g_disre '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_disre_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_disre /usr/src/tmp/gromacs-buildroot/usr/bin/./g_disre_d /bin/sh ../../libtool --mode=install /bin/install -p g_dist '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dist_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dist /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dist_d /bin/sh ../../libtool --mode=install /bin/install -p g_dyndom '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dyndom_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dyndom /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dyndom_d /bin/sh ../../libtool --mode=install /bin/install -p g_enemat '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_enemat_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_enemat /usr/src/tmp/gromacs-buildroot/usr/bin/./g_enemat_d /bin/sh ../../libtool --mode=install /bin/install -p g_energy '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_energy_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_energy /usr/src/tmp/gromacs-buildroot/usr/bin/./g_energy_d /bin/sh ../../libtool --mode=install /bin/install -p g_lie '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_lie_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_lie /usr/src/tmp/gromacs-buildroot/usr/bin/./g_lie_d /bin/sh ../../libtool --mode=install /bin/install -p g_filter '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_filter_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_filter /usr/src/tmp/gromacs-buildroot/usr/bin/./g_filter_d /bin/sh ../../libtool --mode=install /bin/install -p g_gyrate '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_gyrate_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_gyrate /usr/src/tmp/gromacs-buildroot/usr/bin/./g_gyrate_d /bin/sh ../../libtool --mode=install /bin/install -p g_h2order '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_h2order_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_h2order /usr/src/tmp/gromacs-buildroot/usr/bin/./g_h2order_d /bin/sh ../../libtool --mode=install /bin/install -p g_hbond '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_hbond_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_hbond /usr/src/tmp/gromacs-buildroot/usr/bin/./g_hbond_d /bin/sh ../../libtool --mode=install /bin/install -p g_helix '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_helix_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_helix /usr/src/tmp/gromacs-buildroot/usr/bin/./g_helix_d /bin/sh ../../libtool --mode=install /bin/install -p g_mindist '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_mindist_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_mindist /usr/src/tmp/gromacs-buildroot/usr/bin/./g_mindist_d /bin/sh ../../libtool --mode=install /bin/install -p g_msd '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_msd_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_msd /usr/src/tmp/gromacs-buildroot/usr/bin/./g_msd_d /bin/sh ../../libtool --mode=install /bin/install -p g_morph '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_morph_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_morph /usr/src/tmp/gromacs-buildroot/usr/bin/./g_morph_d /bin/sh ../../libtool --mode=install /bin/install -p g_nmeig '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmeig_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmeig /usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmeig_d /bin/sh ../../libtool --mode=install /bin/install -p g_nmens '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmens_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmens /usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmens_d /bin/sh ../../libtool --mode=install /bin/install -p g_order '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_order_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_order /usr/src/tmp/gromacs-buildroot/usr/bin/./g_order_d /bin/sh ../../libtool --mode=install /bin/install -p g_polystat '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_polystat_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_polystat /usr/src/tmp/gromacs-buildroot/usr/bin/./g_polystat_d /bin/sh ../../libtool --mode=install /bin/install -p g_potential '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_potential_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_potential /usr/src/tmp/gromacs-buildroot/usr/bin/./g_potential_d /bin/sh ../../libtool --mode=install /bin/install -p g_rama '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rama_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rama /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rama_d /bin/sh ../../libtool --mode=install /bin/install -p g_rdf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rdf_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rdf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rdf_d /bin/sh ../../libtool --mode=install /bin/install -p g_rms '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rms_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rms /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rms_d /bin/sh ../../libtool --mode=install /bin/install -p g_rmsdist '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsdist_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rmsdist /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsdist_d /bin/sh ../../libtool --mode=install /bin/install -p g_rmsf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsf_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rmsf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsf_d /bin/sh ../../libtool --mode=install /bin/install -p g_rotacf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rotacf_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rotacf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rotacf_d /bin/sh ../../libtool --mode=install /bin/install -p g_saltbr '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_saltbr_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_saltbr /usr/src/tmp/gromacs-buildroot/usr/bin/./g_saltbr_d /bin/sh ../../libtool --mode=install /bin/install -p g_sas '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sas_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sas /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sas_d /bin/sh ../../libtool --mode=install /bin/install -p g_sgangle '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sgangle_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sgangle /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sgangle_d /bin/sh ../../libtool --mode=install /bin/install -p g_sham '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sham_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sham /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sham_d /bin/sh ../../libtool --mode=install /bin/install -p g_sorient '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sorient_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sorient /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sorient_d /bin/sh ../../libtool --mode=install /bin/install -p g_spol '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_spol_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_spol /usr/src/tmp/gromacs-buildroot/usr/bin/./g_spol_d /bin/sh ../../libtool --mode=install /bin/install -p g_sdf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sdf_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sdf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sdf_d /bin/sh ../../libtool --mode=install /bin/install -p g_spatial '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_spatial_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_spatial /usr/src/tmp/gromacs-buildroot/usr/bin/./g_spatial_d /bin/sh ../../libtool --mode=install /bin/install -p g_tcaf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_tcaf_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_tcaf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_tcaf_d /bin/sh ../../libtool --mode=install /bin/install -p g_traj '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_traj_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_traj /usr/src/tmp/gromacs-buildroot/usr/bin/./g_traj_d /bin/sh ../../libtool --mode=install /bin/install -p g_vanhove '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_vanhove_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_vanhove /usr/src/tmp/gromacs-buildroot/usr/bin/./g_vanhove_d /bin/sh ../../libtool --mode=install /bin/install -p g_velacc '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_velacc_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_velacc /usr/src/tmp/gromacs-buildroot/usr/bin/./g_velacc_d /bin/sh ../../libtool --mode=install /bin/install -p g_clustsize '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_clustsize_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_clustsize /usr/src/tmp/gromacs-buildroot/usr/bin/./g_clustsize_d /bin/sh ../../libtool --mode=install /bin/install -p g_mdmat '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_mdmat_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_mdmat /usr/src/tmp/gromacs-buildroot/usr/bin/./g_mdmat_d /bin/sh ../../libtool --mode=install /bin/install -p g_wham '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_wham_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_wham /usr/src/tmp/gromacs-buildroot/usr/bin/./g_wham_d /bin/sh ../../libtool --mode=install /bin/install -p g_kinetics '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_kinetics_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_kinetics /usr/src/tmp/gromacs-buildroot/usr/bin/./g_kinetics_d /bin/sh ../../libtool --mode=install /bin/install -p sigeps '/usr/src/tmp/gromacs-buildroot/usr/bin/./sigeps_d' libtool: install: warning: `libgmxana_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/gmxlib/.libs/libgmx_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/mdlib/.libs/libmd_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/sigeps /usr/src/tmp/gromacs-buildroot/usr/bin/./sigeps_d make install-exec-hook make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/tools' libname="libgmxana_d"; \ nompi="`echo $libname | sed -e 's,_mpi,,'`"; \ libdir="/usr/lib64"; \ if echo $libname | grep mpi >/dev/null ; then \ (cd $libdir && test -e $libname.a -a ! -e $nompi.a && ln -s $libname.a $nompi.a ; exit 0); \ (cd $libdir && test -e $libname.so -a ! -e $nompi.so && ln -s $libname.so $nompi.so ; exit 0); \ fi; make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/tools' make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/tools' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/tools' Making install in ngmx make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/ngmx' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/ngmx' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p ngmx '/usr/src/tmp/gromacs-buildroot/usr/bin/./ngmx_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/ngmx /usr/src/tmp/gromacs-buildroot/usr/bin/./ngmx_d /bin/sh ../../libtool --mode=install /bin/install -p xrama '/usr/src/tmp/gromacs-buildroot/usr/bin/./xrama_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/xrama /usr/src/tmp/gromacs-buildroot/usr/bin/./xrama_d /bin/sh ../../libtool --mode=install /bin/install -p highway '/usr/src/tmp/gromacs-buildroot/usr/bin/./highway_d' libtool: install: warning: `../mdlib/libmd_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/highway /usr/src/tmp/gromacs-buildroot/usr/bin/./highway_d make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/ngmx' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/ngmx' Making install in contrib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/contrib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/contrib' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/contrib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src/contrib' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/src' Making install in admin make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/admin' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/admin' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/admin' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/admin' Making install in scripts make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/scripts' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/scripts' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/install -p GMXRC GMXRC.csh GMXRC.bash GMXRC.zsh '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/install -p ../../scripts/completion.csh ../../scripts/completion.bash ../../scripts/completion.zsh ../../scripts/demux.pl ../../scripts/xplor2gmx.pl '/usr/src/tmp/gromacs-buildroot/usr/bin' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/scripts' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/scripts' Making install in share make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' Making install in top make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/top' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/top' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffgmx.itp ../../../share/top/ffgmxnb.itp ../../../share/top/ffgmxbon.itp ../../../share/top/ffgmx.atp ../../../share/top/ffgmx.hdb ../../../share/top/ffgmx.rtp ../../../share/top/ffgmx-c.tdb ../../../share/top/ffgmx-n.tdb ../../../share/top/ffgmx2.itp ../../../share/top/ffgmx2nb.itp ../../../share/top/ffgmx2bon.itp ../../../share/top/ffgmx2.atp ../../../share/top/ffgmx2.hdb ../../../share/top/ffgmx2.rtp ../../../share/top/ffgmx2-c.tdb ../../../share/top/ffgmx2-n.tdb ../../../share/top/ffG43a1.itp ../../../share/top/ffG43a1nb.itp ../../../share/top/ffG43a1bon.itp ../../../share/top/ffG43a1.atp ../../../share/top/ffG43a1.hdb ../../../share/top/ffG43a1.rtp ../../../share/top/ffG43a1-c.tdb ../../../share/top/ffG43a1-n.tdb ../../../share/top/ffG43a2.itp ../../../share/top/ffG43a2nb.itp ../../../share/top/ffG43a2bon.itp ../../../share/top/ffG43a2.atp ../../../share/top/ffG43a2.hdb ../../../share/top/ffG43a2.rtp ../../../share/top/ffG43a2-c.tdb ../../../share/top/ffG43a2-n.tdb ../../../share/top/ffgmx.ddb ../../../share/top/ffgmx2.ddb ../../../share/top/ffG43a1.ddb ../../../share/top/ffG43a2.ddb ../../../share/top/ffG45a3-c.tdb ../../../share/top/ffG45a3.atp ../../../share/top/ffG45a3.hdb ../../../share/top/ffG45a3.rtp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffG45a3nb.itp ../../../share/top/ffG45a3-n.tdb ../../../share/top/ffG45a3.ddb ../../../share/top/ffG45a3.itp ../../../share/top/ffG45a3bon.itp ../../../share/top/ffG53a5-c.tdb ../../../share/top/ffG53a5.atp ../../../share/top/ffG53a5.hdb ../../../share/top/ffG53a5.rtp ../../../share/top/ffG53a5nb.itp ../../../share/top/ffG53a5-n.tdb ../../../share/top/ffG53a5.ddb ../../../share/top/ffG53a5.itp ../../../share/top/ffG53a5bon.itp ../../../share/top/ffG53a5.n2t ../../../share/top/ffG53a6-c.tdb ../../../share/top/ffG53a6.atp ../../../share/top/ffG53a6.hdb ../../../share/top/ffG53a6.rtp ../../../share/top/ffG53a6nb.itp ../../../share/top/ffG53a6-n.tdb ../../../share/top/ffG53a6.ddb ../../../share/top/ffG53a6.itp ../../../share/top/ffG53a6bon.itp ../../../share/top/ffoplsaa.atp ../../../share/top/ffoplsaa.itp ../../../share/top/ffoplsaabon.itp ../../../share/top/ffoplsaanb.itp ../../../share/top/ffoplsaa.hdb ../../../share/top/ffoplsaa-n.tdb ../../../share/top/ffoplsaa-c.tdb ../../../share/top/ffoplsaa.rtp ../../../share/top/ffoplsaa.ddb ../../../share/top/ffoplsaa.n2t ../../../share/top/ffencads-c.tdb ../../../share/top/ffencads.itp ../../../share/top/ffencadv-c.tdb ../../../share/top/ffencadv.itp ../../../share/top/ffencads-n.tdb ../../../share/top/ffencads.rtp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffencadv-n.tdb ../../../share/top/ffencadv.rtp ../../../share/top/ffencads.atp ../../../share/top/ffencadsbon.itp ../../../share/top/ffencadv.atp ../../../share/top/ffencadvbon.itp ../../../share/top/ffencads.hdb ../../../share/top/ffencadsnb.itp ../../../share/top/ffencadv.hdb ../../../share/top/ffencadvnb.itp ../../../share/top/1mlg.itp ../../../share/top/2mlg.itp ../../../share/top/benzamide.itp ../../../share/top/bondadd.itp ../../../share/top/buck.itp ../../../share/top/decane.itp ../../../share/top/dlg.itp ../../../share/top/dmso.itp ../../../share/top/fa.itp ../../../share/top/ff_dum.itp ../../../share/top/flexspc.itp ../../../share/top/flexspce.itp ../../../share/top/flexwat-ferguson.itp ../../../share/top/h2p4o13.itp ../../../share/top/h2p8o25.itp ../../../share/top/h2po4.itp ../../../share/top/ions.itp ../../../share/top/methanol.itp ../../../share/top/spc.itp ../../../share/top/spce.itp ../../../share/top/tfe.itp ../../../share/top/tip3p.itp ../../../share/top/tip4p.itp ../../../share/top/urea.itp ../../../share/top/dgsolv.dat ../../../share/top/electroneg.dat ../../../share/top/dec50.gro ../../../share/top/dmso.gro ../../../share/top/spc216.gro ../../../share/top/tip4p.gro '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/urea+h2o.gro ../../../share/top/f3c.itp ../../../share/top/aminoacids.dat ../../../share/top/atommass.dat ../../../share/top/bromacs.dat ../../../share/top/ca-shift.dat ../../../share/top/cb-shift.dat ../../../share/top/co-shift.dat ../../../share/top/edissoc.dat ../../../share/top/FF.dat ../../../share/top/gurgle.dat ../../../share/top/ha-shift.dat ../../../share/top/links.dat ../../../share/top/phbres.dat ../../../share/top/random.dat ../../../share/top/refi_aa.dat ../../../share/top/specbond.dat ../../../share/top/surface.dat ../../../share/top/vdwradii.dat ../../../share/top/xlateat.dat ../../../share/top/highway.dat ../../../share/top/export.dlg ../../../share/top/bonds.dlg ../../../share/top/ss.map ../../../share/top/ps.m2p ../../../share/top/table6-10.xvg ../../../share/top/table6-11.xvg ../../../share/top/table6-12.xvg ../../../share/top/table6-8.xvg ../../../share/top/table6-9.xvg ../../../share/top/atom_nom.tbl ../../../share/top/gromacs.dtd ../../../share/top/tip5p.gro ../../../share/top/tip5p.itp ../../../share/top/sw.itp ../../../share/top/elements.dat '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/top' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/top' Making install in tutor make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' Making install in nmr1 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr1' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr1' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr1' /bin/install -p -m 644 ../../../../share/tutor/nmr1/conf.gro ../../../../share/tutor/nmr1/grompp.mdp ../../../../share/tutor/nmr1/pep.pdb ../../../../share/tutor/nmr1/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr1' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr1' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr1' Making install in nmr2 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr2' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr2' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr2' /bin/install -p -m 644 ../../../../share/tutor/nmr2/conf.gro ../../../../share/tutor/nmr2/genconf.gcp ../../../../share/tutor/nmr2/grompp.mdp ../../../../share/tutor/nmr2/pep.pdb ../../../../share/tutor/nmr2/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr2' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr2' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/nmr2' Making install in speptide make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/speptide' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/speptide' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/speptide' /bin/install -p -m 644 ../../../../share/tutor/speptide/em.mdp ../../../../share/tutor/speptide/full.mdp ../../../../share/tutor/speptide/pr.mdp ../../../../share/tutor/speptide/speptide.pdb '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/speptide' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/speptide' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/speptide' Making install in water make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/water' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/water' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/water' /bin/install -p -m 644 ../../../../share/tutor/water/index.ndx ../../../../share/tutor/water/conf.gro ../../../../share/tutor/water/spc216.pdb ../../../../share/tutor/water/grompp.mdp ../../../../share/tutor/water/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/water' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/water' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/water' Making install in gmxdemo make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/gmxdemo' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/gmxdemo' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/install -p -m 644 ../../../../share/tutor/gmxdemo/cpeptide.pdb '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/install -p ../../../../share/tutor/gmxdemo/demo '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo/./demo_d' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/gmxdemo' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/gmxdemo' Making install in methanol make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/methanol' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/methanol' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/methanol' /bin/install -p -m 644 ../../../../share/tutor/methanol/index.ndx ../../../../share/tutor/methanol/conf.gro ../../../../share/tutor/methanol/methanol.pdb ../../../../share/tutor/methanol/grompp.mdp ../../../../share/tutor/methanol/topol.top ../../../../share/tutor/methanol/methanol.itp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/methanol' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/methanol' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/methanol' Making install in mixed make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/mixed' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/mixed' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/mixed' /bin/install -p -m 644 ../../../../share/tutor/mixed/index.ndx ../../../../share/tutor/mixed/conf.gro ../../../../share/tutor/mixed/mixed.pdb ../../../../share/tutor/mixed/grompp.mdp ../../../../share/tutor/mixed/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/mixed' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/mixed' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor/mixed' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/tutor' Making install in template make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/template' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/template' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/template' /bin/install -p -m 644 ../../../share/template/template.c ../../../share/template/README Makefile.x86_64-alt-linux-gnu_double '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/template' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/template' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/template' Making install in html make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' Making install in . make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html' /bin/install -p -m 644 ../../../share/html/online.html ../../../share/html/gmxfaq.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' Making install in images make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/images' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/images' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/images' /bin/install -p -m 644 ../../../../share/html/images/features.gif ../../../../share/html/images/flow_leftrightup.gif ../../../../share/html/images/flow_vrule.gif ../../../../share/html/images/flow_down.gif ../../../../share/html/images/flow_leftup.gif ../../../../share/html/images/links.gif ../../../../share/html/images/articles.gif ../../../../share/html/images/flow_downleft.gif ../../../../share/html/images/flow_right+left.gif ../../../../share/html/images/mail.gif ../../../../share/html/images/bench.gif ../../../../share/html/images/flow_hline.gif ../../../../share/html/images/flow_right.gif ../../../../share/html/images/manual.gif ../../../../share/html/images/charts_down.gif ../../../../share/html/images/flow_left.gif ../../../../share/html/images/flow_rightleftdown.gif ../../../../share/html/images/gmxlogo_small.jpg ../../../../share/html/images/charts_up.gif ../../../../share/html/images/flow_leftright.gif ../../../../share/html/images/flow_uprightleft.gif ../../../../share/html/images/software.gif ../../../../share/html/images/faq.gif ../../../../share/html/images/flow_leftrightdown.gif ../../../../share/html/images/flow_vline.gif ../../../../share/html/images/topologies.gif ../../../../share/html/images/plotje.gif ../../../../share/html/images/xvgr.gif ../../../../share/html/images/1ctf-0.jpg ../../../../share/html/images/1ctf-0.2.jpg ../../../../share/html/images/1ctf-0.5.jpg ../../../../share/html/images/1ctf-1.jpg ../../../../share/html/images/1ctf-4.jpg ../../../../share/html/images/1ctf-10.jpg '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/images' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/images' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/images' Making install in online make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/online' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/online' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/cpt.html ../../../../share/html/online/dat.html ../../../../share/html/online/g_disre.html ../../../../share/html/online/g_sorient.html ../../../../share/html/online/ndx.html ../../../../share/html/online/dlg.html ../../../../share/html/online/g_dist.html ../../../../share/html/online/g_tcaf.html ../../../../share/html/online/ngmx.html ../../../../share/html/online/do_dssp.html ../../../../share/html/online/g_dyndom.html ../../../../share/html/online/g_traj.html ../../../../share/html/online/edi.html ../../../../share/html/online/g_enemat.html ../../../../share/html/online/g_velacc.html ../../../../share/html/online/options.html ../../../../share/html/online/editconf.html ../../../../share/html/online/g_energy.html ../../../../share/html/online/genbox.html ../../../../share/html/online/out.html ../../../../share/html/online/edo.html ../../../../share/html/online/g_gyrate.html ../../../../share/html/online/genconf.html ../../../../share/html/online/pdb.html ../../../../share/html/online/edr.html ../../../../share/html/online/g_h2order.html ../../../../share/html/online/genion.html ../../../../share/html/online/pdb2gmx.html ../../../../share/html/online/ene.html ../../../../share/html/online/g_hbond.html ../../../../share/html/online/genpr.html ../../../../share/html/online/protonate.html ../../../../share/html/online/eneconv.html ../../../../share/html/online/g_helix.html ../../../../share/html/online/getting_started.html ../../../../share/html/online/rtp.html ../../../../share/html/online/eps.html ../../../../share/html/online/g_lie.html ../../../../share/html/online/gmxcheck.html ../../../../share/html/online/tex.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/files.html ../../../../share/html/online/g_mdmat.html ../../../../share/html/online/gmxdump.html ../../../../share/html/online/top.html ../../../../share/html/online/flow.html ../../../../share/html/online/g_mindist.html ../../../../share/html/online/gro.html ../../../../share/html/online/tpa.html ../../../../share/html/online/g87.html ../../../../share/html/online/g_morph.html ../../../../share/html/online/grompp.html ../../../../share/html/online/tpb.html ../../../../share/html/online/g96.html ../../../../share/html/online/g_msd.html ../../../../share/html/online/hat.html ../../../../share/html/online/tpbconv.html ../../../../share/html/online/g_anaeig.html ../../../../share/html/online/g_nmeig.html ../../../../share/html/online/highway.html ../../../../share/html/online/tpr.html ../../../../share/html/online/g_analyze.html ../../../../share/html/online/g_nmens.html ../../../../share/html/online/include_bot.html ../../../../share/html/online/trj.html ../../../../share/html/online/g_angle.html ../../../../share/html/online/g_order.html ../../../../share/html/online/include_top.html ../../../../share/html/online/trjcat.html ../../../../share/html/online/g_bond.html ../../../../share/html/online/g_potential.html ../../../../share/html/online/itp.html ../../../../share/html/online/trjconv.html ../../../../share/html/online/g_bundle.html ../../../../share/html/online/g_rama.html ../../../../share/html/online/log.html ../../../../share/html/online/trjorder.html ../../../../share/html/online/g_chi.html ../../../../share/html/online/g_rdf.html ../../../../share/html/online/m2p.html ../../../../share/html/online/trr.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/g_cluster.html ../../../../share/html/online/g_rms.html ../../../../share/html/online/make_ndx.html ../../../../share/html/online/wheel.html ../../../../share/html/online/g_confrms.html ../../../../share/html/online/g_rmsdist.html ../../../../share/html/online/map.html ../../../../share/html/online/x2top.html ../../../../share/html/online/g_covar.html ../../../../share/html/online/g_rmsf.html ../../../../share/html/online/mdp.html ../../../../share/html/online/xpm.html ../../../../share/html/online/g_density.html ../../../../share/html/online/g_rotacf.html ../../../../share/html/online/mdp_opt.html ../../../../share/html/online/xpm2ps.html ../../../../share/html/online/g_dielectric.html ../../../../share/html/online/g_saltbr.html ../../../../share/html/online/mdrun.html ../../../../share/html/online/xrama.html ../../../../share/html/online/g_dih.html ../../../../share/html/online/g_sas.html ../../../../share/html/online/mk_angndx.html ../../../../share/html/online/xtc.html ../../../../share/html/online/g_dipoles.html ../../../../share/html/online/g_sgangle.html ../../../../share/html/online/mtx.html ../../../../share/html/online/xvg.html ../../../../share/html/online/g_densmap.html ../../../../share/html/online/g_sham.html ../../../../share/html/online/make_edi.html ../../../../share/html/online/style.css ../../../../share/html/online/water.html ../../../../share/html/online/gmxdemo.html ../../../../share/html/online/speptide.html ../../../../share/html/online/yourown.html ../../../../share/html/online/methanol.html ../../../../share/html/online/mixed.html ../../../../share/html/online/protunf.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/online' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html/online' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share/html' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/share' Making install in man make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' Making install in man1 make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man/man1' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man/man1' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1' /bin/install -p -m 644 '../../../man/man1/anadock.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/anadock_d.1' /bin/install -p -m 644 '../../../man/man1/do_dssp.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/do_dssp_d.1' /bin/install -p -m 644 '../../../man/man1/editconf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/editconf_d.1' /bin/install -p -m 644 '../../../man/man1/eneconv.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/eneconv_d.1' /bin/install -p -m 644 '../../../man/man1/g_anaeig.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_anaeig_d.1' /bin/install -p -m 644 '../../../man/man1/g_analyze.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_analyze_d.1' /bin/install -p -m 644 '../../../man/man1/g_angle.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_angle_d.1' /bin/install -p -m 644 '../../../man/man1/g_bond.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_bond_d.1' /bin/install -p -m 644 '../../../man/man1/g_bundle.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_bundle_d.1' /bin/install -p -m 644 '../../../man/man1/g_chi.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_chi_d.1' /bin/install -p -m 644 '../../../man/man1/g_cluster.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_cluster_d.1' /bin/install -p -m 644 '../../../man/man1/g_clustsize.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_clustsize_d.1' /bin/install -p -m 644 '../../../man/man1/g_confrms.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_confrms_d.1' /bin/install -p -m 644 '../../../man/man1/g_covar.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_covar_d.1' /bin/install -p -m 644 '../../../man/man1/g_current.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_current_d.1' /bin/install -p -m 644 '../../../man/man1/g_density.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_density_d.1' /bin/install -p -m 644 '../../../man/man1/g_densmap.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_densmap_d.1' /bin/install -p -m 644 '../../../man/man1/g_dielectric.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dielectric_d.1' /bin/install -p -m 644 '../../../man/man1/g_dih.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dih_d.1' /bin/install -p -m 644 '../../../man/man1/g_dipoles.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dipoles_d.1' /bin/install -p -m 644 '../../../man/man1/g_disre.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_disre_d.1' /bin/install -p -m 644 '../../../man/man1/g_dist.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dist_d.1' /bin/install -p -m 644 '../../../man/man1/g_dyndom.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dyndom_d.1' /bin/install -p -m 644 '../../../man/man1/g_enemat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_enemat_d.1' /bin/install -p -m 644 '../../../man/man1/g_energy.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_energy_d.1' /bin/install -p -m 644 '../../../man/man1/g_filter.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_filter_d.1' /bin/install -p -m 644 '../../../man/man1/g_gyrate.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_gyrate_d.1' /bin/install -p -m 644 '../../../man/man1/g_h2order.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_h2order_d.1' /bin/install -p -m 644 '../../../man/man1/g_hbond.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_hbond_d.1' /bin/install -p -m 644 '../../../man/man1/g_helix.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_helix_d.1' /bin/install -p -m 644 '../../../man/man1/g_helixorient.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_helixorient_d.1' /bin/install -p -m 644 '../../../man/man1/g_kinetics.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_kinetics_d.1' /bin/install -p -m 644 '../../../man/man1/g_lie.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_lie_d.1' /bin/install -p -m 644 '../../../man/man1/g_mdmat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mdmat_d.1' /bin/install -p -m 644 '../../../man/man1/g_mindist.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mindist_d.1' /bin/install -p -m 644 '../../../man/man1/g_morph.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_morph_d.1' /bin/install -p -m 644 '../../../man/man1/g_msd.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_msd_d.1' /bin/install -p -m 644 '../../../man/man1/g_nmeig.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_nmeig_d.1' /bin/install -p -m 644 '../../../man/man1/g_nmens.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_nmens_d.1' /bin/install -p -m 644 '../../../man/man1/g_nmtraj.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_nmtraj_d.1' /bin/install -p -m 644 '../../../man/man1/g_order.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_order_d.1' /bin/install -p -m 644 '../../../man/man1/g_polystat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_polystat_d.1' /bin/install -p -m 644 '../../../man/man1/g_potential.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_potential_d.1' /bin/install -p -m 644 '../../../man/man1/g_principal.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_principal_d.1' /bin/install -p -m 644 '../../../man/man1/g_rama.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rama_d.1' /bin/install -p -m 644 '../../../man/man1/g_rdf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rdf_d.1' /bin/install -p -m 644 '../../../man/man1/g_rms.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rms_d.1' /bin/install -p -m 644 '../../../man/man1/g_rmsdist.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rmsdist_d.1' /bin/install -p -m 644 '../../../man/man1/g_rmsf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rmsf_d.1' /bin/install -p -m 644 '../../../man/man1/g_rotacf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rotacf_d.1' /bin/install -p -m 644 '../../../man/man1/g_saltbr.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_saltbr_d.1' /bin/install -p -m 644 '../../../man/man1/g_sas.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sas_d.1' /bin/install -p -m 644 '../../../man/man1/g_sdf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sdf_d.1' /bin/install -p -m 644 '../../../man/man1/g_sgangle.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sgangle_d.1' /bin/install -p -m 644 '../../../man/man1/g_sham.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sham_d.1' /bin/install -p -m 644 '../../../man/man1/g_sorient.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sorient_d.1' /bin/install -p -m 644 '../../../man/man1/g_spatial.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_spatial_d.1' /bin/install -p -m 644 '../../../man/man1/g_spol.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_spol_d.1' /bin/install -p -m 644 '../../../man/man1/g_tcaf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_tcaf_d.1' /bin/install -p -m 644 '../../../man/man1/g_traj.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_traj_d.1' /bin/install -p -m 644 '../../../man/man1/g_vanhove.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_vanhove_d.1' /bin/install -p -m 644 '../../../man/man1/g_velacc.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_velacc_d.1' /bin/install -p -m 644 '../../../man/man1/g_wham.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_wham_d.1' /bin/install -p -m 644 '../../../man/man1/gen_table.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gen_table_d.1' /bin/install -p -m 644 '../../../man/man1/genbox.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genbox_d.1' /bin/install -p -m 644 '../../../man/man1/genconf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genconf_d.1' /bin/install -p -m 644 '../../../man/man1/genion.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genion_d.1' /bin/install -p -m 644 '../../../man/man1/genrestr.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genrestr_d.1' /bin/install -p -m 644 '../../../man/man1/gmxcheck.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxcheck_d.1' /bin/install -p -m 644 '../../../man/man1/gmxdump.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxdump_d.1' /bin/install -p -m 644 '../../../man/man1/grompp.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/grompp_d.1' /bin/install -p -m 644 '../../../man/man1/highway.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/highway_d.1' /bin/install -p -m 644 '../../../man/man1/make_edi.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_edi_d.1' /bin/install -p -m 644 '../../../man/man1/make_ndx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_ndx_d.1' /bin/install -p -m 644 '../../../man/man1/mdrun.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mdrun_d.1' /bin/install -p -m 644 '../../../man/man1/mk_angndx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mk_angndx_d.1' /bin/install -p -m 644 '../../../man/man1/ngmx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/ngmx_d.1' /bin/install -p -m 644 '../../../man/man1/pdb2gmx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/pdb2gmx_d.1' /bin/install -p -m 644 '../../../man/man1/protonate.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/protonate_d.1' /bin/install -p -m 644 '../../../man/man1/sigeps.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/sigeps_d.1' /bin/install -p -m 644 '../../../man/man1/tpbconv.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/tpbconv_d.1' /bin/install -p -m 644 '../../../man/man1/trjcat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjcat_d.1' /bin/install -p -m 644 '../../../man/man1/trjconv.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjconv_d.1' /bin/install -p -m 644 '../../../man/man1/trjorder.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjorder_d.1' /bin/install -p -m 644 '../../../man/man1/wheel.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/wheel_d.1' /bin/install -p -m 644 '../../../man/man1/x2top.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/x2top_d.1' /bin/install -p -m 644 '../../../man/man1/xpm2ps.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xpm2ps_d.1' /bin/install -p -m 644 '../../../man/man1/xrama.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xrama_d.1' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man/man1' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man/man1' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double/man' make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' make install-exec-hook make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' GROMACS is installed under /usr. Make sure to update your PATH and MANPATH to find the programs and unix manual pages, and possibly LD_LIBRARY_PATH or /etc/ld.so.conf if you are using dynamic libraries. Please run "make tests" now to verify your installation. If you want links to the executables in /usr/local/bin, you can issue "make links" now. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' make: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/double' + popd ~/RPM/BUILD/gromacs-4.0.7 + pushd mpi-single ~/RPM/BUILD/gromacs-4.0.7/mpi-single ~/RPM/BUILD/gromacs-4.0.7 + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/gromacs-buildroot make: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' Making install in include make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' Making install in . make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/3dview.h ../../include/assert.h ../../include/atomprop.h ../../include/bondf.h ../../include/calcgrid.h ../../include/calch.h ../../include/calcmu.h ../../include/checkpoint.h ../../include/confio.h ../../include/constr.h ../../include/copyrite.h ../../include/coulomb.h ../../include/dihre.h ../../include/disre.h ../../include/domdec.h ../../include/domdec_network.h ../../include/do_fit.h ../../include/ebin.h ../../include/edsam.h ../../include/enxio.h ../../include/gmx_fatal.h ../../include/ffscanf.h ../../include/fftgrid.h ../../include/filenm.h ../../include/force.h ../../include/futil.h ../../include/gbutil.h ../../include/gmx_ana.h ../../include/gmx_arpack.h ../../include/gmx_blas.h ../../include/gmxcomplex.h ../../include/gmx_cyclecounter.h ../../include/gmxfio.h ../../include/gmx_fft.h ../../include/gmx_lapack.h ../../include/gmx_random.h ../../include/gmx_parallel_3dfft.h ../../include/gmx_system_xdr.h ../../include/gmx_thread.h ../../include/gmx_wallcycle.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/gpp_atomtype.h ../../include/gpp_nextnb.h ../../include/grompp.h ../../include/gstat.h ../../include/index.h ../../include/invblock.h ../../include/macros.h ../../include/magic.h ../../include/main.h ../../include/maths.h ../../include/matio.h ../../include/mdatoms.h ../../include/mdebin.h ../../include/mdrun.h ../../include/mpelogging.h ../../include/mshift.h ../../include/mtop_util.h ../../include/mtxio.h ../../include/mvdata.h ../../include/names.h ../../include/network.h ../../include/nonbonded.h ../../include/nrama.h ../../include/nrjac.h ../../include/nrnb.h ../../include/nsgrid.h ../../include/ns.h ../../include/orires.h ../../include/partdec.h ../../include/pbc.h ../../include/pdbio.h ../../include/pdebug.h ../../include/perf_est.h ../../include/physics.h ../../include/pme.h ../../include/pppm.h ../../include/princ.h ../../include/pull.h ../../include/qmmm.h ../../include/random.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/rbin.h ../../include/rdgroup.h ../../include/readcomp.h ../../include/readinp.h ../../include/reorder.h ../../include/rmpbc.h ../../include/shellfc.h ../../include/shift.h ../../include/smalloc.h ../../include/sortwater.h ../../include/sparsematrix.h ../../include/split.h ../../include/splitter.h ../../include/statusio.h ../../include/statutil.h ../../include/strdb.h ../../include/string2.h ../../include/struc2.h ../../include/symtab.h ../../include/sysstuff.h ../../include/tags.h ../../include/tgroup.h ../../include/topsort.h ../../include/tpxio.h ../../include/transfer.h ../../include/trnio.h ../../include/txtdump.h ../../include/typedefs.h ../../include/update.h ../../include/utils.h ../../include/vcm.h ../../include/vec.h ../../include/viewit.h ../../include/vsite.h ../../include/wgms.h ../../include/wman.h ../../include/writeps.h ../../include/xdrf.h ../../include/xtcio.h ../../include/xvgr.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' Making install in types make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include/types' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include/types' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs/types' /bin/install -p -m 644 ../../../include/types/atoms.h ../../../include/types/forcerec.h ../../../include/types/ifunc.h ../../../include/types/mdatom.h ../../../include/types/simple.h ../../../include/types/block.h ../../../include/types/constr.h ../../../include/types/energy.h ../../../include/types/graph.h ../../../include/types/inputrec.h ../../../include/types/nblist.h ../../../include/types/ns.h ../../../include/types/nsgrid.h ../../../include/types/symtab.h ../../../include/types/commrec.h ../../../include/types/enums.h ../../../include/types/group.h ../../../include/types/ishift.h ../../../include/types/nbslist.h ../../../include/types/topology.h ../../../include/types/fcdata.h ../../../include/types/filenm.h ../../../include/types/idef.h ../../../include/types/matrix.h ../../../include/types/nrnb.h ../../../include/types/trx.h ../../../include/types/state.h ../../../include/types/pbc.h ../../../include/types/qmmmrec.h ../../../include/types/shellfc.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs/types' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include/types' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include/types' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/include' Making install in src make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' Making install in gmxlib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' Making install in nonbonded make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' Making install in nb_kernel_x86_64_sse make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel_x86_64_sse' Making install in nb_kernel make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' make install-am make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' make[6]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded/nb_kernel' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/nonbonded' Making install in gmx_blas make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_blas' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_blas' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_blas' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_blas' Making install in gmx_lapack make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_lapack' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_lapack' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_lapack' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/gmx_lapack' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libgmx_mpi.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/install -p .libs/libgmx_mpi.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmx_mpi.so.5.0.0 libgmx_mpi.so.5 || { rm -f libgmx_mpi.so.5 && ln -s libgmx_mpi.so.5.0.0 libgmx_mpi.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmx_mpi.so.5.0.0 libgmx_mpi.so || { rm -f libgmx_mpi.so && ln -s libgmx_mpi.so.5.0.0 libgmx_mpi.so; }; }) /bin/install -p .libs/libgmx_mpi.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib' Making install in mdlib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libmd_mpi.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' libtool: install: warning: relinking `libmd_mpi.la' (cd /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib; /bin/sh ../../libtool --tag=CC --mode=relink mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libmd_mpi.la -rpath /usr/lib64 calcmu.lo calcvir.lo constr.lo coupling.lo domdec.lo domdec_con.lo domdec_network.lo domdec_setup.lo domdec_top.lo ebin.lo edsam.lo ewald.lo fftgrid.lo force.lo ghat.lo init.lo mdatom.lo mdebin.lo minimize.lo mvxvf.lo ns.lo nsgrid.lo perf_est.lo pme.lo pme_pp.lo pppm.lo partdec.lo pull.lo pullutil.lo rf_util.lo shakef.lo sim_util.lo shellfc.lo stat.lo tables.lo tgroup.lo update.lo vcm.lo vsite.lo wall.lo wnblist.lo csettle.lo clincs.lo qmmm.lo gmx_fft.lo gmx_parallel_3dfft.lo gmx_wallcycle.lo qm_gaussian.lo gmx_fft_fftw3.lo ../gmxlib/libgmx_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -inst-prefix-dir /usr/src/tmp/gromacs-buildroot) mpicc -shared .libs/calcmu.o .libs/calcvir.o .libs/constr.o .libs/coupling.o .libs/domdec.o .libs/domdec_con.o .libs/domdec_network.o .libs/domdec_setup.o .libs/domdec_top.o .libs/ebin.o .libs/edsam.o .libs/ewald.o .libs/fftgrid.o .libs/force.o .libs/ghat.o .libs/init.o .libs/mdatom.o .libs/mdebin.o .libs/minimize.o .libs/mvxvf.o .libs/ns.o .libs/nsgrid.o .libs/perf_est.o .libs/pme.o .libs/pme_pp.o .libs/pppm.o .libs/partdec.o .libs/pull.o .libs/pullutil.o .libs/rf_util.o .libs/shakef.o .libs/sim_util.o .libs/shellfc.o .libs/stat.o .libs/tables.o .libs/tgroup.o .libs/update.o .libs/vcm.o .libs/vsite.o .libs/wall.o .libs/wnblist.o .libs/csettle.o .libs/clincs.o .libs/qmmm.o .libs/gmx_fft.o .libs/gmx_parallel_3dfft.o .libs/gmx_wallcycle.o .libs/qm_gaussian.o .libs/gmx_fft_fftw3.o -lgslcblas -L/usr/src/tmp/gromacs-buildroot/usr/lib64 -L/usr/lib64 -lgmx_mpi -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libmd_mpi.so.5 -o .libs/libmd_mpi.so.5.0.0 /bin/install -p .libs/libmd_mpi.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libmd_mpi.so.5.0.0 libmd_mpi.so.5 || { rm -f libmd_mpi.so.5 && ln -s libmd_mpi.so.5.0.0 libmd_mpi.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libmd_mpi.so.5.0.0 libmd_mpi.so || { rm -f libmd_mpi.so && ln -s libmd_mpi.so.5.0.0 libmd_mpi.so; }; }) /bin/install -p .libs/libmd_mpi.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' make install-exec-hook make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib' make[4]: Nothing to be done for `install-exec-hook'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib' make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib' Making install in kernel make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/kernel' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/kernel' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p grompp '/usr/src/tmp/gromacs-buildroot/usr/bin/./grompp_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/grompp /usr/src/tmp/gromacs-buildroot/usr/bin/./grompp_mpi /bin/sh ../../libtool --mode=install /bin/install -p mdrun '/usr/src/tmp/gromacs-buildroot/usr/bin/./mdrun_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/mdrun /usr/src/tmp/gromacs-buildroot/usr/bin/./mdrun_mpi /bin/sh ../../libtool --mode=install /bin/install -p tpbconv '/usr/src/tmp/gromacs-buildroot/usr/bin/./tpbconv_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/tpbconv /usr/src/tmp/gromacs-buildroot/usr/bin/./tpbconv_mpi /bin/sh ../../libtool --mode=install /bin/install -p pdb2gmx '/usr/src/tmp/gromacs-buildroot/usr/bin/./pdb2gmx_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/pdb2gmx /usr/src/tmp/gromacs-buildroot/usr/bin/./pdb2gmx_mpi /bin/sh ../../libtool --mode=install /bin/install -p protonate '/usr/src/tmp/gromacs-buildroot/usr/bin/./protonate_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/protonate /usr/src/tmp/gromacs-buildroot/usr/bin/./protonate_mpi /bin/sh ../../libtool --mode=install /bin/install -p luck '/usr/src/tmp/gromacs-buildroot/usr/bin/./luck_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/luck /usr/src/tmp/gromacs-buildroot/usr/bin/./luck_mpi /bin/sh ../../libtool --mode=install /bin/install -p gmxdump '/usr/src/tmp/gromacs-buildroot/usr/bin/./gmxdump_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/gmxdump /usr/src/tmp/gromacs-buildroot/usr/bin/./gmxdump_mpi /bin/sh ../../libtool --mode=install /bin/install -p gmxcheck '/usr/src/tmp/gromacs-buildroot/usr/bin/./gmxcheck_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/gmxcheck /usr/src/tmp/gromacs-buildroot/usr/bin/./gmxcheck_mpi /bin/sh ../../libtool --mode=install /bin/install -p x2top '/usr/src/tmp/gromacs-buildroot/usr/bin/./x2top_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/x2top /usr/src/tmp/gromacs-buildroot/usr/bin/./x2top_mpi make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/kernel' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/kernel' Making install in tools make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/tools' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/tools' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libgmxana_mpi.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' libtool: install: warning: relinking `libgmxana_mpi.la' (cd /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/tools; /bin/sh ../../libtool --tag=CC --mode=relink mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o libgmxana_mpi.la -rpath /usr/lib64 autocorr.lo expfit.lo polynomials.lo levenmar.lo anadih.lo pp2shift.lo dlist.lo eigio.lo lsq.lo cmat.lo eigensolver.lo nsc.lo hxprops.lo fitahx.lo gmx_analyze.lo gmx_anaeig.lo gmx_angle.lo gmx_bond.lo gmx_bundle.lo gmx_chi.lo gmx_cluster.lo gmx_confrms.lo gmx_covar.lo gmx_current.lo gmx_density.lo gmx_densmap.lo gmx_dih.lo gmx_dielectric.lo gmx_kinetics.lo gmx_spatial.lo gmx_dipoles.lo gmx_disre.lo gmx_dist.lo gmx_dyndom.lo gmx_enemat.lo gmx_energy.lo gmx_lie.lo gmx_filter.lo gmx_gyrate.lo gmx_h2order.lo gmx_hbond.lo gmx_helix.lo gmx_mindist.lo gmx_msd.lo gmx_morph.lo gmx_nmeig.lo gmx_nmens.lo gmx_order.lo gmx_principal.lo gmx_polystat.lo gmx_potential.lo gmx_rama.lo gmx_rdf.lo gmx_rms.lo gmx_rmsdist.lo gmx_rmsf.lo gmx_rotacf.lo gmx_saltbr.lo gmx_sas.lo gmx_sdf.lo gmx_sgangle.lo gmx_sorient.lo gmx_spol.lo gmx_tcaf.lo gmx_traj.lo gmx_velacc.lo gmx_helixorient.lo gmx_clustsize.lo gmx_mdmat.lo gmx_wham.lo correl.lo gmx_sham.lo gmx_nmtraj.lo gmx_trjconv.lo gmx_trjcat.lo gmx_trjorder.lo gmx_xpm2ps.lo gmx_editconf.lo gmx_genbox.lo gmx_genion.lo gmx_genconf.lo gmx_genpr.lo gmx_eneconv.lo gmx_vanhove.lo gmx_wheel.lo addconf.lo calcpot.lo edittop.lo ../gmxlib/libgmx_mpi.la ../mdlib/libmd_mpi.la -lgsl -lnsl -lfftw3f -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -lmpi -lopen-pal -lopen-rte -inst-prefix-dir /usr/src/tmp/gromacs-buildroot) mpicc -shared .libs/autocorr.o .libs/expfit.o .libs/polynomials.o .libs/levenmar.o .libs/anadih.o .libs/pp2shift.o .libs/dlist.o .libs/eigio.o .libs/lsq.o .libs/cmat.o .libs/eigensolver.o .libs/nsc.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_analyze.o .libs/gmx_anaeig.o .libs/gmx_angle.o .libs/gmx_bond.o .libs/gmx_bundle.o .libs/gmx_chi.o .libs/gmx_cluster.o .libs/gmx_confrms.o .libs/gmx_covar.o .libs/gmx_current.o .libs/gmx_density.o .libs/gmx_densmap.o .libs/gmx_dih.o .libs/gmx_dielectric.o .libs/gmx_kinetics.o .libs/gmx_spatial.o .libs/gmx_dipoles.o .libs/gmx_disre.o .libs/gmx_dist.o .libs/gmx_dyndom.o .libs/gmx_enemat.o .libs/gmx_energy.o .libs/gmx_lie.o .libs/gmx_filter.o .libs/gmx_gyrate.o .libs/gmx_h2order.o .libs/gmx_hbond.o .libs/gmx_helix.o .libs/gmx_mindist.o .libs/gmx_msd.o .libs/gmx_morph.o .libs/gmx_nmeig.o .libs/gmx_nmens.o .libs/gmx_order.o .libs/gmx_principal.o .libs/gmx_polystat.o .libs/gmx_potential.o .libs/gmx_rama.o .libs/gmx_rdf.o .libs/gmx_rms.o .libs/gmx_rmsdist.o .libs/gmx_rmsf.o .libs/gmx_rotacf.o .libs/gmx_saltbr.o .libs/gmx_sas.o .libs/gmx_sdf.o .libs/gmx_sgangle.o .libs/gmx_sorient.o .libs/gmx_spol.o .libs/gmx_tcaf.o .libs/gmx_traj.o .libs/gmx_velacc.o .libs/gmx_helixorient.o .libs/gmx_clustsize.o .libs/gmx_mdmat.o .libs/gmx_wham.o .libs/correl.o .libs/gmx_sham.o .libs/gmx_nmtraj.o .libs/gmx_trjconv.o .libs/gmx_trjcat.o .libs/gmx_trjorder.o .libs/gmx_xpm2ps.o .libs/gmx_editconf.o .libs/gmx_genbox.o .libs/gmx_genion.o .libs/gmx_genconf.o .libs/gmx_genpr.o .libs/gmx_eneconv.o .libs/gmx_vanhove.o .libs/gmx_wheel.o .libs/addconf.o .libs/calcpot.o .libs/edittop.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs -L/usr/lib64/openmpi/lib -L/usr/src/tmp/gromacs-buildroot/usr/lib64 -L/usr/lib64 -lgsl -lnsl -lfftw3f -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi -lmd_mpi -L/usr/src/tmp/gromacs-buildroot/usr/lib64/openmpi/lib -lmpi -lopen-pal -lopen-rte -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-Rpath:/usr/lib64/openmpi/lib -Wl,-soname -Wl,libgmxana_mpi.so.5 -o .libs/libgmxana_mpi.so.5.0.0 /bin/install -p .libs/libgmxana_mpi.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmxana_mpi.so.5.0.0 libgmxana_mpi.so.5 || { rm -f libgmxana_mpi.so.5 && ln -s libgmxana_mpi.so.5.0.0 libgmxana_mpi.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmxana_mpi.so.5.0.0 libgmxana_mpi.so || { rm -f libgmxana_mpi.so && ln -s libgmxana_mpi.so.5.0.0 libgmxana_mpi.so; }; }) /bin/install -p .libs/libgmxana_mpi.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p do_dssp '/usr/src/tmp/gromacs-buildroot/usr/bin/./do_dssp_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/do_dssp /usr/src/tmp/gromacs-buildroot/usr/bin/./do_dssp_mpi /bin/sh ../../libtool --mode=install /bin/install -p editconf '/usr/src/tmp/gromacs-buildroot/usr/bin/./editconf_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/editconf /usr/src/tmp/gromacs-buildroot/usr/bin/./editconf_mpi /bin/sh ../../libtool --mode=install /bin/install -p eneconv '/usr/src/tmp/gromacs-buildroot/usr/bin/./eneconv_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/eneconv /usr/src/tmp/gromacs-buildroot/usr/bin/./eneconv_mpi /bin/sh ../../libtool --mode=install /bin/install -p genbox '/usr/src/tmp/gromacs-buildroot/usr/bin/./genbox_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genbox /usr/src/tmp/gromacs-buildroot/usr/bin/./genbox_mpi /bin/sh ../../libtool --mode=install /bin/install -p genconf '/usr/src/tmp/gromacs-buildroot/usr/bin/./genconf_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genconf /usr/src/tmp/gromacs-buildroot/usr/bin/./genconf_mpi /bin/sh ../../libtool --mode=install /bin/install -p genrestr '/usr/src/tmp/gromacs-buildroot/usr/bin/./genrestr_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genrestr /usr/src/tmp/gromacs-buildroot/usr/bin/./genrestr_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_nmtraj '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmtraj_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmtraj /usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmtraj_mpi /bin/sh ../../libtool --mode=install /bin/install -p make_ndx '/usr/src/tmp/gromacs-buildroot/usr/bin/./make_ndx_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/make_ndx /usr/src/tmp/gromacs-buildroot/usr/bin/./make_ndx_mpi /bin/sh ../../libtool --mode=install /bin/install -p mk_angndx '/usr/src/tmp/gromacs-buildroot/usr/bin/./mk_angndx_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/mk_angndx /usr/src/tmp/gromacs-buildroot/usr/bin/./mk_angndx_mpi /bin/sh ../../libtool --mode=install /bin/install -p trjcat '/usr/src/tmp/gromacs-buildroot/usr/bin/./trjcat_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjcat /usr/src/tmp/gromacs-buildroot/usr/bin/./trjcat_mpi /bin/sh ../../libtool --mode=install /bin/install -p trjconv '/usr/src/tmp/gromacs-buildroot/usr/bin/./trjconv_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjconv /usr/src/tmp/gromacs-buildroot/usr/bin/./trjconv_mpi /bin/sh ../../libtool --mode=install /bin/install -p trjorder '/usr/src/tmp/gromacs-buildroot/usr/bin/./trjorder_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjorder /usr/src/tmp/gromacs-buildroot/usr/bin/./trjorder_mpi /bin/sh ../../libtool --mode=install /bin/install -p wheel '/usr/src/tmp/gromacs-buildroot/usr/bin/./wheel_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/wheel /usr/src/tmp/gromacs-buildroot/usr/bin/./wheel_mpi /bin/sh ../../libtool --mode=install /bin/install -p xpm2ps '/usr/src/tmp/gromacs-buildroot/usr/bin/./xpm2ps_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/xpm2ps /usr/src/tmp/gromacs-buildroot/usr/bin/./xpm2ps_mpi /bin/sh ../../libtool --mode=install /bin/install -p genion '/usr/src/tmp/gromacs-buildroot/usr/bin/./genion_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genion /usr/src/tmp/gromacs-buildroot/usr/bin/./genion_mpi /bin/sh ../../libtool --mode=install /bin/install -p anadock '/usr/src/tmp/gromacs-buildroot/usr/bin/./anadock_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/anadock /usr/src/tmp/gromacs-buildroot/usr/bin/./anadock_mpi /bin/sh ../../libtool --mode=install /bin/install -p make_edi '/usr/src/tmp/gromacs-buildroot/usr/bin/./make_edi_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/make_edi /usr/src/tmp/gromacs-buildroot/usr/bin/./make_edi_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_analyze '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_analyze_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_analyze /usr/src/tmp/gromacs-buildroot/usr/bin/./g_analyze_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_anaeig '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_anaeig_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_anaeig /usr/src/tmp/gromacs-buildroot/usr/bin/./g_anaeig_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_angle '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_angle_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_angle /usr/src/tmp/gromacs-buildroot/usr/bin/./g_angle_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_bond '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_bond_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_bond /usr/src/tmp/gromacs-buildroot/usr/bin/./g_bond_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_bundle '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_bundle_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_bundle /usr/src/tmp/gromacs-buildroot/usr/bin/./g_bundle_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_chi '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_chi_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_chi /usr/src/tmp/gromacs-buildroot/usr/bin/./g_chi_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_cluster '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_cluster_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_cluster /usr/src/tmp/gromacs-buildroot/usr/bin/./g_cluster_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_confrms '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_confrms_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_confrms /usr/src/tmp/gromacs-buildroot/usr/bin/./g_confrms_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_covar '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_covar_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_covar /usr/src/tmp/gromacs-buildroot/usr/bin/./g_covar_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_current '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_current_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_current /usr/src/tmp/gromacs-buildroot/usr/bin/./g_current_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_density '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_density_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_density /usr/src/tmp/gromacs-buildroot/usr/bin/./g_density_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_densmap '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_densmap_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_densmap /usr/src/tmp/gromacs-buildroot/usr/bin/./g_densmap_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_dih '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dih_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dih /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dih_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_dielectric '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dielectric_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dielectric /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dielectric_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_helixorient '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_helixorient_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_helixorient /usr/src/tmp/gromacs-buildroot/usr/bin/./g_helixorient_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_principal '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_principal_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_principal /usr/src/tmp/gromacs-buildroot/usr/bin/./g_principal_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_dipoles '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dipoles_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dipoles /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dipoles_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_disre '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_disre_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_disre /usr/src/tmp/gromacs-buildroot/usr/bin/./g_disre_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_dist '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dist_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dist /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dist_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_dyndom '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dyndom_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dyndom /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dyndom_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_enemat '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_enemat_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_enemat /usr/src/tmp/gromacs-buildroot/usr/bin/./g_enemat_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_energy '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_energy_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_energy /usr/src/tmp/gromacs-buildroot/usr/bin/./g_energy_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_lie '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_lie_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_lie /usr/src/tmp/gromacs-buildroot/usr/bin/./g_lie_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_filter '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_filter_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_filter /usr/src/tmp/gromacs-buildroot/usr/bin/./g_filter_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_gyrate '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_gyrate_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_gyrate /usr/src/tmp/gromacs-buildroot/usr/bin/./g_gyrate_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_h2order '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_h2order_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_h2order /usr/src/tmp/gromacs-buildroot/usr/bin/./g_h2order_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_hbond '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_hbond_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_hbond /usr/src/tmp/gromacs-buildroot/usr/bin/./g_hbond_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_helix '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_helix_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_helix /usr/src/tmp/gromacs-buildroot/usr/bin/./g_helix_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_mindist '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_mindist_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_mindist /usr/src/tmp/gromacs-buildroot/usr/bin/./g_mindist_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_msd '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_msd_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_msd /usr/src/tmp/gromacs-buildroot/usr/bin/./g_msd_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_morph '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_morph_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_morph /usr/src/tmp/gromacs-buildroot/usr/bin/./g_morph_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_nmeig '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmeig_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmeig /usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmeig_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_nmens '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmens_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmens /usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmens_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_order '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_order_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_order /usr/src/tmp/gromacs-buildroot/usr/bin/./g_order_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_polystat '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_polystat_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_polystat /usr/src/tmp/gromacs-buildroot/usr/bin/./g_polystat_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_potential '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_potential_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_potential /usr/src/tmp/gromacs-buildroot/usr/bin/./g_potential_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_rama '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rama_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rama /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rama_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_rdf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rdf_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rdf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rdf_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_rms '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rms_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rms /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rms_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_rmsdist '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsdist_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rmsdist /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsdist_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_rmsf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsf_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rmsf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsf_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_rotacf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rotacf_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rotacf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rotacf_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_saltbr '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_saltbr_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_saltbr /usr/src/tmp/gromacs-buildroot/usr/bin/./g_saltbr_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_sas '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sas_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sas /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sas_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_sgangle '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sgangle_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sgangle /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sgangle_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_sham '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sham_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sham /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sham_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_sorient '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sorient_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sorient /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sorient_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_spol '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_spol_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_spol /usr/src/tmp/gromacs-buildroot/usr/bin/./g_spol_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_sdf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sdf_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sdf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sdf_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_spatial '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_spatial_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_spatial /usr/src/tmp/gromacs-buildroot/usr/bin/./g_spatial_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_tcaf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_tcaf_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_tcaf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_tcaf_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_traj '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_traj_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_traj /usr/src/tmp/gromacs-buildroot/usr/bin/./g_traj_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_vanhove '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_vanhove_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_vanhove /usr/src/tmp/gromacs-buildroot/usr/bin/./g_vanhove_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_velacc '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_velacc_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_velacc /usr/src/tmp/gromacs-buildroot/usr/bin/./g_velacc_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_clustsize '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_clustsize_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_clustsize /usr/src/tmp/gromacs-buildroot/usr/bin/./g_clustsize_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_mdmat '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_mdmat_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_mdmat /usr/src/tmp/gromacs-buildroot/usr/bin/./g_mdmat_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_wham '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_wham_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_wham /usr/src/tmp/gromacs-buildroot/usr/bin/./g_wham_mpi /bin/sh ../../libtool --mode=install /bin/install -p g_kinetics '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_kinetics_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_kinetics /usr/src/tmp/gromacs-buildroot/usr/bin/./g_kinetics_mpi /bin/sh ../../libtool --mode=install /bin/install -p sigeps '/usr/src/tmp/gromacs-buildroot/usr/bin/./sigeps_mpi' libtool: install: warning: `libgmxana_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/gmxlib/.libs/libgmx_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/mdlib/.libs/libmd_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/sigeps /usr/src/tmp/gromacs-buildroot/usr/bin/./sigeps_mpi make install-exec-hook make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/tools' libname="libgmxana_mpi"; \ nompi="`echo $libname | sed -e 's,_mpi,,'`"; \ libdir="/usr/lib64"; \ if echo $libname | grep mpi >/dev/null ; then \ (cd $libdir && test -e $libname.a -a ! -e $nompi.a && ln -s $libname.a $nompi.a ; exit 0); \ (cd $libdir && test -e $libname.so -a ! -e $nompi.so && ln -s $libname.so $nompi.so ; exit 0); \ fi; make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/tools' make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/tools' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/tools' Making install in ngmx make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/ngmx' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/ngmx' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p ngmx '/usr/src/tmp/gromacs-buildroot/usr/bin/./ngmx_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/ngmx /usr/src/tmp/gromacs-buildroot/usr/bin/./ngmx_mpi /bin/sh ../../libtool --mode=install /bin/install -p xrama '/usr/src/tmp/gromacs-buildroot/usr/bin/./xrama_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/xrama /usr/src/tmp/gromacs-buildroot/usr/bin/./xrama_mpi /bin/sh ../../libtool --mode=install /bin/install -p highway '/usr/src/tmp/gromacs-buildroot/usr/bin/./highway_mpi' libtool: install: warning: `../mdlib/libmd_mpi.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi.la' has not been installed in `/usr/lib64' /bin/install -p .libs/highway /usr/src/tmp/gromacs-buildroot/usr/bin/./highway_mpi make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/ngmx' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/ngmx' Making install in contrib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/contrib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/contrib' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/contrib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src/contrib' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/src' Making install in admin make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/admin' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/admin' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/admin' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/admin' Making install in scripts make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/scripts' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/scripts' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/install -p GMXRC GMXRC.csh GMXRC.bash GMXRC.zsh '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/install -p ../../scripts/completion.csh ../../scripts/completion.bash ../../scripts/completion.zsh ../../scripts/demux.pl ../../scripts/xplor2gmx.pl '/usr/src/tmp/gromacs-buildroot/usr/bin' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/scripts' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/scripts' Making install in share make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' Making install in top make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/top' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/top' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffgmx.itp ../../../share/top/ffgmxnb.itp ../../../share/top/ffgmxbon.itp ../../../share/top/ffgmx.atp ../../../share/top/ffgmx.hdb ../../../share/top/ffgmx.rtp ../../../share/top/ffgmx-c.tdb ../../../share/top/ffgmx-n.tdb ../../../share/top/ffgmx2.itp ../../../share/top/ffgmx2nb.itp ../../../share/top/ffgmx2bon.itp ../../../share/top/ffgmx2.atp ../../../share/top/ffgmx2.hdb ../../../share/top/ffgmx2.rtp ../../../share/top/ffgmx2-c.tdb ../../../share/top/ffgmx2-n.tdb ../../../share/top/ffG43a1.itp ../../../share/top/ffG43a1nb.itp ../../../share/top/ffG43a1bon.itp ../../../share/top/ffG43a1.atp ../../../share/top/ffG43a1.hdb ../../../share/top/ffG43a1.rtp ../../../share/top/ffG43a1-c.tdb ../../../share/top/ffG43a1-n.tdb ../../../share/top/ffG43a2.itp ../../../share/top/ffG43a2nb.itp ../../../share/top/ffG43a2bon.itp ../../../share/top/ffG43a2.atp ../../../share/top/ffG43a2.hdb ../../../share/top/ffG43a2.rtp ../../../share/top/ffG43a2-c.tdb ../../../share/top/ffG43a2-n.tdb ../../../share/top/ffgmx.ddb ../../../share/top/ffgmx2.ddb ../../../share/top/ffG43a1.ddb ../../../share/top/ffG43a2.ddb ../../../share/top/ffG45a3-c.tdb ../../../share/top/ffG45a3.atp ../../../share/top/ffG45a3.hdb ../../../share/top/ffG45a3.rtp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffG45a3nb.itp ../../../share/top/ffG45a3-n.tdb ../../../share/top/ffG45a3.ddb ../../../share/top/ffG45a3.itp ../../../share/top/ffG45a3bon.itp ../../../share/top/ffG53a5-c.tdb ../../../share/top/ffG53a5.atp ../../../share/top/ffG53a5.hdb ../../../share/top/ffG53a5.rtp ../../../share/top/ffG53a5nb.itp ../../../share/top/ffG53a5-n.tdb ../../../share/top/ffG53a5.ddb ../../../share/top/ffG53a5.itp ../../../share/top/ffG53a5bon.itp ../../../share/top/ffG53a5.n2t ../../../share/top/ffG53a6-c.tdb ../../../share/top/ffG53a6.atp ../../../share/top/ffG53a6.hdb ../../../share/top/ffG53a6.rtp ../../../share/top/ffG53a6nb.itp ../../../share/top/ffG53a6-n.tdb ../../../share/top/ffG53a6.ddb ../../../share/top/ffG53a6.itp ../../../share/top/ffG53a6bon.itp ../../../share/top/ffoplsaa.atp ../../../share/top/ffoplsaa.itp ../../../share/top/ffoplsaabon.itp ../../../share/top/ffoplsaanb.itp ../../../share/top/ffoplsaa.hdb ../../../share/top/ffoplsaa-n.tdb ../../../share/top/ffoplsaa-c.tdb ../../../share/top/ffoplsaa.rtp ../../../share/top/ffoplsaa.ddb ../../../share/top/ffoplsaa.n2t ../../../share/top/ffencads-c.tdb ../../../share/top/ffencads.itp ../../../share/top/ffencadv-c.tdb ../../../share/top/ffencadv.itp ../../../share/top/ffencads-n.tdb ../../../share/top/ffencads.rtp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffencadv-n.tdb ../../../share/top/ffencadv.rtp ../../../share/top/ffencads.atp ../../../share/top/ffencadsbon.itp ../../../share/top/ffencadv.atp ../../../share/top/ffencadvbon.itp ../../../share/top/ffencads.hdb ../../../share/top/ffencadsnb.itp ../../../share/top/ffencadv.hdb ../../../share/top/ffencadvnb.itp ../../../share/top/1mlg.itp ../../../share/top/2mlg.itp ../../../share/top/benzamide.itp ../../../share/top/bondadd.itp ../../../share/top/buck.itp ../../../share/top/decane.itp ../../../share/top/dlg.itp ../../../share/top/dmso.itp ../../../share/top/fa.itp ../../../share/top/ff_dum.itp ../../../share/top/flexspc.itp ../../../share/top/flexspce.itp ../../../share/top/flexwat-ferguson.itp ../../../share/top/h2p4o13.itp ../../../share/top/h2p8o25.itp ../../../share/top/h2po4.itp ../../../share/top/ions.itp ../../../share/top/methanol.itp ../../../share/top/spc.itp ../../../share/top/spce.itp ../../../share/top/tfe.itp ../../../share/top/tip3p.itp ../../../share/top/tip4p.itp ../../../share/top/urea.itp ../../../share/top/dgsolv.dat ../../../share/top/electroneg.dat ../../../share/top/dec50.gro ../../../share/top/dmso.gro ../../../share/top/spc216.gro ../../../share/top/tip4p.gro '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/urea+h2o.gro ../../../share/top/f3c.itp ../../../share/top/aminoacids.dat ../../../share/top/atommass.dat ../../../share/top/bromacs.dat ../../../share/top/ca-shift.dat ../../../share/top/cb-shift.dat ../../../share/top/co-shift.dat ../../../share/top/edissoc.dat ../../../share/top/FF.dat ../../../share/top/gurgle.dat ../../../share/top/ha-shift.dat ../../../share/top/links.dat ../../../share/top/phbres.dat ../../../share/top/random.dat ../../../share/top/refi_aa.dat ../../../share/top/specbond.dat ../../../share/top/surface.dat ../../../share/top/vdwradii.dat ../../../share/top/xlateat.dat ../../../share/top/highway.dat ../../../share/top/export.dlg ../../../share/top/bonds.dlg ../../../share/top/ss.map ../../../share/top/ps.m2p ../../../share/top/table6-10.xvg ../../../share/top/table6-11.xvg ../../../share/top/table6-12.xvg ../../../share/top/table6-8.xvg ../../../share/top/table6-9.xvg ../../../share/top/atom_nom.tbl ../../../share/top/gromacs.dtd ../../../share/top/tip5p.gro ../../../share/top/tip5p.itp ../../../share/top/sw.itp ../../../share/top/elements.dat '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/top' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/top' Making install in tutor make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' Making install in nmr1 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr1' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr1' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr1' /bin/install -p -m 644 ../../../../share/tutor/nmr1/conf.gro ../../../../share/tutor/nmr1/grompp.mdp ../../../../share/tutor/nmr1/pep.pdb ../../../../share/tutor/nmr1/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr1' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr1' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr1' Making install in nmr2 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr2' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr2' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr2' /bin/install -p -m 644 ../../../../share/tutor/nmr2/conf.gro ../../../../share/tutor/nmr2/genconf.gcp ../../../../share/tutor/nmr2/grompp.mdp ../../../../share/tutor/nmr2/pep.pdb ../../../../share/tutor/nmr2/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr2' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr2' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/nmr2' Making install in speptide make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/speptide' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/speptide' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/speptide' /bin/install -p -m 644 ../../../../share/tutor/speptide/em.mdp ../../../../share/tutor/speptide/full.mdp ../../../../share/tutor/speptide/pr.mdp ../../../../share/tutor/speptide/speptide.pdb '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/speptide' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/speptide' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/speptide' Making install in water make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/water' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/water' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/water' /bin/install -p -m 644 ../../../../share/tutor/water/index.ndx ../../../../share/tutor/water/conf.gro ../../../../share/tutor/water/spc216.pdb ../../../../share/tutor/water/grompp.mdp ../../../../share/tutor/water/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/water' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/water' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/water' Making install in gmxdemo make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/gmxdemo' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/gmxdemo' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/install -p -m 644 ../../../../share/tutor/gmxdemo/cpeptide.pdb '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/install -p ../../../../share/tutor/gmxdemo/demo '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo/./demo_mpi' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/gmxdemo' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/gmxdemo' Making install in methanol make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/methanol' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/methanol' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/methanol' /bin/install -p -m 644 ../../../../share/tutor/methanol/index.ndx ../../../../share/tutor/methanol/conf.gro ../../../../share/tutor/methanol/methanol.pdb ../../../../share/tutor/methanol/grompp.mdp ../../../../share/tutor/methanol/topol.top ../../../../share/tutor/methanol/methanol.itp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/methanol' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/methanol' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/methanol' Making install in mixed make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/mixed' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/mixed' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/mixed' /bin/install -p -m 644 ../../../../share/tutor/mixed/index.ndx ../../../../share/tutor/mixed/conf.gro ../../../../share/tutor/mixed/mixed.pdb ../../../../share/tutor/mixed/grompp.mdp ../../../../share/tutor/mixed/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/mixed' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/mixed' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor/mixed' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/tutor' Making install in template make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/template' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/template' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/template' /bin/install -p -m 644 ../../../share/template/template.c ../../../share/template/README Makefile.x86_64-alt-linux-gnu '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/template' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/template' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/template' Making install in html make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' Making install in . make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html' /bin/install -p -m 644 ../../../share/html/online.html ../../../share/html/gmxfaq.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' Making install in images make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/images' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/images' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/images' /bin/install -p -m 644 ../../../../share/html/images/features.gif ../../../../share/html/images/flow_leftrightup.gif ../../../../share/html/images/flow_vrule.gif ../../../../share/html/images/flow_down.gif ../../../../share/html/images/flow_leftup.gif ../../../../share/html/images/links.gif ../../../../share/html/images/articles.gif ../../../../share/html/images/flow_downleft.gif ../../../../share/html/images/flow_right+left.gif ../../../../share/html/images/mail.gif ../../../../share/html/images/bench.gif ../../../../share/html/images/flow_hline.gif ../../../../share/html/images/flow_right.gif ../../../../share/html/images/manual.gif ../../../../share/html/images/charts_down.gif ../../../../share/html/images/flow_left.gif ../../../../share/html/images/flow_rightleftdown.gif ../../../../share/html/images/gmxlogo_small.jpg ../../../../share/html/images/charts_up.gif ../../../../share/html/images/flow_leftright.gif ../../../../share/html/images/flow_uprightleft.gif ../../../../share/html/images/software.gif ../../../../share/html/images/faq.gif ../../../../share/html/images/flow_leftrightdown.gif ../../../../share/html/images/flow_vline.gif ../../../../share/html/images/topologies.gif ../../../../share/html/images/plotje.gif ../../../../share/html/images/xvgr.gif ../../../../share/html/images/1ctf-0.jpg ../../../../share/html/images/1ctf-0.2.jpg ../../../../share/html/images/1ctf-0.5.jpg ../../../../share/html/images/1ctf-1.jpg ../../../../share/html/images/1ctf-4.jpg ../../../../share/html/images/1ctf-10.jpg '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/images' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/images' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/images' Making install in online make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/online' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/online' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/cpt.html ../../../../share/html/online/dat.html ../../../../share/html/online/g_disre.html ../../../../share/html/online/g_sorient.html ../../../../share/html/online/ndx.html ../../../../share/html/online/dlg.html ../../../../share/html/online/g_dist.html ../../../../share/html/online/g_tcaf.html ../../../../share/html/online/ngmx.html ../../../../share/html/online/do_dssp.html ../../../../share/html/online/g_dyndom.html ../../../../share/html/online/g_traj.html ../../../../share/html/online/edi.html ../../../../share/html/online/g_enemat.html ../../../../share/html/online/g_velacc.html ../../../../share/html/online/options.html ../../../../share/html/online/editconf.html ../../../../share/html/online/g_energy.html ../../../../share/html/online/genbox.html ../../../../share/html/online/out.html ../../../../share/html/online/edo.html ../../../../share/html/online/g_gyrate.html ../../../../share/html/online/genconf.html ../../../../share/html/online/pdb.html ../../../../share/html/online/edr.html ../../../../share/html/online/g_h2order.html ../../../../share/html/online/genion.html ../../../../share/html/online/pdb2gmx.html ../../../../share/html/online/ene.html ../../../../share/html/online/g_hbond.html ../../../../share/html/online/genpr.html ../../../../share/html/online/protonate.html ../../../../share/html/online/eneconv.html ../../../../share/html/online/g_helix.html ../../../../share/html/online/getting_started.html ../../../../share/html/online/rtp.html ../../../../share/html/online/eps.html ../../../../share/html/online/g_lie.html ../../../../share/html/online/gmxcheck.html ../../../../share/html/online/tex.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/files.html ../../../../share/html/online/g_mdmat.html ../../../../share/html/online/gmxdump.html ../../../../share/html/online/top.html ../../../../share/html/online/flow.html ../../../../share/html/online/g_mindist.html ../../../../share/html/online/gro.html ../../../../share/html/online/tpa.html ../../../../share/html/online/g87.html ../../../../share/html/online/g_morph.html ../../../../share/html/online/grompp.html ../../../../share/html/online/tpb.html ../../../../share/html/online/g96.html ../../../../share/html/online/g_msd.html ../../../../share/html/online/hat.html ../../../../share/html/online/tpbconv.html ../../../../share/html/online/g_anaeig.html ../../../../share/html/online/g_nmeig.html ../../../../share/html/online/highway.html ../../../../share/html/online/tpr.html ../../../../share/html/online/g_analyze.html ../../../../share/html/online/g_nmens.html ../../../../share/html/online/include_bot.html ../../../../share/html/online/trj.html ../../../../share/html/online/g_angle.html ../../../../share/html/online/g_order.html ../../../../share/html/online/include_top.html ../../../../share/html/online/trjcat.html ../../../../share/html/online/g_bond.html ../../../../share/html/online/g_potential.html ../../../../share/html/online/itp.html ../../../../share/html/online/trjconv.html ../../../../share/html/online/g_bundle.html ../../../../share/html/online/g_rama.html ../../../../share/html/online/log.html ../../../../share/html/online/trjorder.html ../../../../share/html/online/g_chi.html ../../../../share/html/online/g_rdf.html ../../../../share/html/online/m2p.html ../../../../share/html/online/trr.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/g_cluster.html ../../../../share/html/online/g_rms.html ../../../../share/html/online/make_ndx.html ../../../../share/html/online/wheel.html ../../../../share/html/online/g_confrms.html ../../../../share/html/online/g_rmsdist.html ../../../../share/html/online/map.html ../../../../share/html/online/x2top.html ../../../../share/html/online/g_covar.html ../../../../share/html/online/g_rmsf.html ../../../../share/html/online/mdp.html ../../../../share/html/online/xpm.html ../../../../share/html/online/g_density.html ../../../../share/html/online/g_rotacf.html ../../../../share/html/online/mdp_opt.html ../../../../share/html/online/xpm2ps.html ../../../../share/html/online/g_dielectric.html ../../../../share/html/online/g_saltbr.html ../../../../share/html/online/mdrun.html ../../../../share/html/online/xrama.html ../../../../share/html/online/g_dih.html ../../../../share/html/online/g_sas.html ../../../../share/html/online/mk_angndx.html ../../../../share/html/online/xtc.html ../../../../share/html/online/g_dipoles.html ../../../../share/html/online/g_sgangle.html ../../../../share/html/online/mtx.html ../../../../share/html/online/xvg.html ../../../../share/html/online/g_densmap.html ../../../../share/html/online/g_sham.html ../../../../share/html/online/make_edi.html ../../../../share/html/online/style.css ../../../../share/html/online/water.html ../../../../share/html/online/gmxdemo.html ../../../../share/html/online/speptide.html ../../../../share/html/online/yourown.html ../../../../share/html/online/methanol.html ../../../../share/html/online/mixed.html ../../../../share/html/online/protunf.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/online' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html/online' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share/html' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/share' Making install in man make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' Making install in man1 make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man/man1' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man/man1' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1' /bin/install -p -m 644 '../../../man/man1/anadock.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/anadock_mpi.1' /bin/install -p -m 644 '../../../man/man1/do_dssp.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/do_dssp_mpi.1' /bin/install -p -m 644 '../../../man/man1/editconf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/editconf_mpi.1' /bin/install -p -m 644 '../../../man/man1/eneconv.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/eneconv_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_anaeig.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_anaeig_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_analyze.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_analyze_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_angle.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_angle_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_bond.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_bond_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_bundle.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_bundle_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_chi.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_chi_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_cluster.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_cluster_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_clustsize.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_clustsize_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_confrms.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_confrms_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_covar.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_covar_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_current.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_current_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_density.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_density_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_densmap.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_densmap_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_dielectric.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dielectric_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_dih.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dih_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_dipoles.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dipoles_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_disre.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_disre_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_dist.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dist_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_dyndom.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dyndom_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_enemat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_enemat_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_energy.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_energy_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_filter.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_filter_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_gyrate.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_gyrate_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_h2order.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_h2order_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_hbond.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_hbond_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_helix.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_helix_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_helixorient.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_helixorient_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_kinetics.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_kinetics_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_lie.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_lie_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_mdmat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mdmat_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_mindist.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mindist_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_morph.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_morph_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_msd.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_msd_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_nmeig.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_nmeig_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_nmens.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_nmens_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_nmtraj.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_nmtraj_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_order.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_order_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_polystat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_polystat_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_potential.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_potential_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_principal.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_principal_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_rama.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rama_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_rdf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rdf_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_rms.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rms_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_rmsdist.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rmsdist_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_rmsf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rmsf_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_rotacf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rotacf_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_saltbr.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_saltbr_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_sas.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sas_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_sdf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sdf_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_sgangle.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sgangle_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_sham.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sham_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_sorient.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sorient_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_spatial.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_spatial_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_spol.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_spol_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_tcaf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_tcaf_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_traj.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_traj_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_vanhove.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_vanhove_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_velacc.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_velacc_mpi.1' /bin/install -p -m 644 '../../../man/man1/g_wham.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_wham_mpi.1' /bin/install -p -m 644 '../../../man/man1/gen_table.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gen_table_mpi.1' /bin/install -p -m 644 '../../../man/man1/genbox.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genbox_mpi.1' /bin/install -p -m 644 '../../../man/man1/genconf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genconf_mpi.1' /bin/install -p -m 644 '../../../man/man1/genion.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genion_mpi.1' /bin/install -p -m 644 '../../../man/man1/genrestr.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genrestr_mpi.1' /bin/install -p -m 644 '../../../man/man1/gmxcheck.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxcheck_mpi.1' /bin/install -p -m 644 '../../../man/man1/gmxdump.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxdump_mpi.1' /bin/install -p -m 644 '../../../man/man1/grompp.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/grompp_mpi.1' /bin/install -p -m 644 '../../../man/man1/highway.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/highway_mpi.1' /bin/install -p -m 644 '../../../man/man1/make_edi.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_edi_mpi.1' /bin/install -p -m 644 '../../../man/man1/make_ndx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_ndx_mpi.1' /bin/install -p -m 644 '../../../man/man1/mdrun.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mdrun_mpi.1' /bin/install -p -m 644 '../../../man/man1/mk_angndx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mk_angndx_mpi.1' /bin/install -p -m 644 '../../../man/man1/ngmx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/ngmx_mpi.1' /bin/install -p -m 644 '../../../man/man1/pdb2gmx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/pdb2gmx_mpi.1' /bin/install -p -m 644 '../../../man/man1/protonate.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/protonate_mpi.1' /bin/install -p -m 644 '../../../man/man1/sigeps.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/sigeps_mpi.1' /bin/install -p -m 644 '../../../man/man1/tpbconv.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/tpbconv_mpi.1' /bin/install -p -m 644 '../../../man/man1/trjcat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjcat_mpi.1' /bin/install -p -m 644 '../../../man/man1/trjconv.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjconv_mpi.1' /bin/install -p -m 644 '../../../man/man1/trjorder.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjorder_mpi.1' /bin/install -p -m 644 '../../../man/man1/wheel.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/wheel_mpi.1' /bin/install -p -m 644 '../../../man/man1/x2top.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/x2top_mpi.1' /bin/install -p -m 644 '../../../man/man1/xpm2ps.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xpm2ps_mpi.1' /bin/install -p -m 644 '../../../man/man1/xrama.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xrama_mpi.1' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man/man1' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man/man1' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single/man' make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' make install-exec-hook make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' GROMACS is installed under /usr. Make sure to update your PATH and MANPATH to find the programs and unix manual pages, and possibly LD_LIBRARY_PATH or /etc/ld.so.conf if you are using dynamic libraries. Please run "make tests" now to verify your installation. If you want links to the executables in /usr/local/bin, you can issue "make links" now. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' make: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-single' + popd ~/RPM/BUILD/gromacs-4.0.7 + pushd mpi-double ~/RPM/BUILD/gromacs-4.0.7/mpi-double ~/RPM/BUILD/gromacs-4.0.7 + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/gromacs-buildroot make: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' Making install in include make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' Making install in . make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/3dview.h ../../include/assert.h ../../include/atomprop.h ../../include/bondf.h ../../include/calcgrid.h ../../include/calch.h ../../include/calcmu.h ../../include/checkpoint.h ../../include/confio.h ../../include/constr.h ../../include/copyrite.h ../../include/coulomb.h ../../include/dihre.h ../../include/disre.h ../../include/domdec.h ../../include/domdec_network.h ../../include/do_fit.h ../../include/ebin.h ../../include/edsam.h ../../include/enxio.h ../../include/gmx_fatal.h ../../include/ffscanf.h ../../include/fftgrid.h ../../include/filenm.h ../../include/force.h ../../include/futil.h ../../include/gbutil.h ../../include/gmx_ana.h ../../include/gmx_arpack.h ../../include/gmx_blas.h ../../include/gmxcomplex.h ../../include/gmx_cyclecounter.h ../../include/gmxfio.h ../../include/gmx_fft.h ../../include/gmx_lapack.h ../../include/gmx_random.h ../../include/gmx_parallel_3dfft.h ../../include/gmx_system_xdr.h ../../include/gmx_thread.h ../../include/gmx_wallcycle.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/gpp_atomtype.h ../../include/gpp_nextnb.h ../../include/grompp.h ../../include/gstat.h ../../include/index.h ../../include/invblock.h ../../include/macros.h ../../include/magic.h ../../include/main.h ../../include/maths.h ../../include/matio.h ../../include/mdatoms.h ../../include/mdebin.h ../../include/mdrun.h ../../include/mpelogging.h ../../include/mshift.h ../../include/mtop_util.h ../../include/mtxio.h ../../include/mvdata.h ../../include/names.h ../../include/network.h ../../include/nonbonded.h ../../include/nrama.h ../../include/nrjac.h ../../include/nrnb.h ../../include/nsgrid.h ../../include/ns.h ../../include/orires.h ../../include/partdec.h ../../include/pbc.h ../../include/pdbio.h ../../include/pdebug.h ../../include/perf_est.h ../../include/physics.h ../../include/pme.h ../../include/pppm.h ../../include/princ.h ../../include/pull.h ../../include/qmmm.h ../../include/random.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' /bin/install -p -m 644 ../../include/rbin.h ../../include/rdgroup.h ../../include/readcomp.h ../../include/readinp.h ../../include/reorder.h ../../include/rmpbc.h ../../include/shellfc.h ../../include/shift.h ../../include/smalloc.h ../../include/sortwater.h ../../include/sparsematrix.h ../../include/split.h ../../include/splitter.h ../../include/statusio.h ../../include/statutil.h ../../include/strdb.h ../../include/string2.h ../../include/struc2.h ../../include/symtab.h ../../include/sysstuff.h ../../include/tags.h ../../include/tgroup.h ../../include/topsort.h ../../include/tpxio.h ../../include/transfer.h ../../include/trnio.h ../../include/txtdump.h ../../include/typedefs.h ../../include/update.h ../../include/utils.h ../../include/vcm.h ../../include/vec.h ../../include/viewit.h ../../include/vsite.h ../../include/wgms.h ../../include/wman.h ../../include/writeps.h ../../include/xdrf.h ../../include/xtcio.h ../../include/xvgr.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' Making install in types make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include/types' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include/types' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs/types' /bin/install -p -m 644 ../../../include/types/atoms.h ../../../include/types/forcerec.h ../../../include/types/ifunc.h ../../../include/types/mdatom.h ../../../include/types/simple.h ../../../include/types/block.h ../../../include/types/constr.h ../../../include/types/energy.h ../../../include/types/graph.h ../../../include/types/inputrec.h ../../../include/types/nblist.h ../../../include/types/ns.h ../../../include/types/nsgrid.h ../../../include/types/symtab.h ../../../include/types/commrec.h ../../../include/types/enums.h ../../../include/types/group.h ../../../include/types/ishift.h ../../../include/types/nbslist.h ../../../include/types/topology.h ../../../include/types/fcdata.h ../../../include/types/filenm.h ../../../include/types/idef.h ../../../include/types/matrix.h ../../../include/types/nrnb.h ../../../include/types/trx.h ../../../include/types/state.h ../../../include/types/pbc.h ../../../include/types/qmmmrec.h ../../../include/types/shellfc.h '/usr/src/tmp/gromacs-buildroot/usr/include/gromacs/types' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include/types' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include/types' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/include' Making install in src make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' Making install in gmxlib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' Making install in nonbonded make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' Making install in nb_kernel_x86_64_sse2 make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel_x86_64_sse2' Making install in nb_kernel make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' make install-am make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' make[6]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded/nb_kernel' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' make[5]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/nonbonded' Making install in gmx_blas make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_blas' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_blas' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_blas' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_blas' Making install in gmx_lapack make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_lapack' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_lapack' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_lapack' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/gmx_lapack' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libgmx_mpi_d.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/install -p .libs/libgmx_mpi_d.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi_d.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmx_mpi_d.so.5.0.0 libgmx_mpi_d.so.5 || { rm -f libgmx_mpi_d.so.5 && ln -s libgmx_mpi_d.so.5.0.0 libgmx_mpi_d.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmx_mpi_d.so.5.0.0 libgmx_mpi_d.so || { rm -f libgmx_mpi_d.so && ln -s libgmx_mpi_d.so.5.0.0 libgmx_mpi_d.so; }; }) /bin/install -p .libs/libgmx_mpi_d.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi_d.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib' Making install in mdlib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libmd_mpi_d.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' libtool: install: warning: relinking `libmd_mpi_d.la' (cd /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib; /bin/sh ../../libtool --tag=CC --mode=relink mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -lgslcblas -o libmd_mpi_d.la -rpath /usr/lib64 calcmu.lo calcvir.lo constr.lo coupling.lo domdec.lo domdec_con.lo domdec_network.lo domdec_setup.lo domdec_top.lo ebin.lo edsam.lo ewald.lo fftgrid.lo force.lo ghat.lo init.lo mdatom.lo mdebin.lo minimize.lo mvxvf.lo ns.lo nsgrid.lo perf_est.lo pme.lo pme_pp.lo pppm.lo partdec.lo pull.lo pullutil.lo rf_util.lo shakef.lo sim_util.lo shellfc.lo stat.lo tables.lo tgroup.lo update.lo vcm.lo vsite.lo wall.lo wnblist.lo csettle.lo clincs.lo qmmm.lo gmx_fft.lo gmx_parallel_3dfft.lo gmx_wallcycle.lo qm_gaussian.lo gmx_fft_fftw3.lo ../gmxlib/libgmx_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -inst-prefix-dir /usr/src/tmp/gromacs-buildroot) mpicc -shared .libs/calcmu.o .libs/calcvir.o .libs/constr.o .libs/coupling.o .libs/domdec.o .libs/domdec_con.o .libs/domdec_network.o .libs/domdec_setup.o .libs/domdec_top.o .libs/ebin.o .libs/edsam.o .libs/ewald.o .libs/fftgrid.o .libs/force.o .libs/ghat.o .libs/init.o .libs/mdatom.o .libs/mdebin.o .libs/minimize.o .libs/mvxvf.o .libs/ns.o .libs/nsgrid.o .libs/perf_est.o .libs/pme.o .libs/pme_pp.o .libs/pppm.o .libs/partdec.o .libs/pull.o .libs/pullutil.o .libs/rf_util.o .libs/shakef.o .libs/sim_util.o .libs/shellfc.o .libs/stat.o .libs/tables.o .libs/tgroup.o .libs/update.o .libs/vcm.o .libs/vsite.o .libs/wall.o .libs/wnblist.o .libs/csettle.o .libs/clincs.o .libs/qmmm.o .libs/gmx_fft.o .libs/gmx_parallel_3dfft.o .libs/gmx_wallcycle.o .libs/qm_gaussian.o .libs/gmx_fft_fftw3.o -lgslcblas -L/usr/src/tmp/gromacs-buildroot/usr/lib64 -L/usr/lib64 -lgmx_mpi_d -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-soname -Wl,libmd_mpi_d.so.5 -o .libs/libmd_mpi_d.so.5.0.0 /bin/install -p .libs/libmd_mpi_d.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libmd_mpi_d.so.5.0.0 libmd_mpi_d.so.5 || { rm -f libmd_mpi_d.so.5 && ln -s libmd_mpi_d.so.5.0.0 libmd_mpi_d.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libmd_mpi_d.so.5.0.0 libmd_mpi_d.so || { rm -f libmd_mpi_d.so && ln -s libmd_mpi_d.so.5.0.0 libmd_mpi_d.so; }; }) /bin/install -p .libs/libmd_mpi_d.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' make install-exec-hook make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib' make[4]: Nothing to be done for `install-exec-hook'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib' make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib' Making install in kernel make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/kernel' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/kernel' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p grompp '/usr/src/tmp/gromacs-buildroot/usr/bin/./grompp_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/grompp /usr/src/tmp/gromacs-buildroot/usr/bin/./grompp_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p mdrun '/usr/src/tmp/gromacs-buildroot/usr/bin/./mdrun_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/mdrun /usr/src/tmp/gromacs-buildroot/usr/bin/./mdrun_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p tpbconv '/usr/src/tmp/gromacs-buildroot/usr/bin/./tpbconv_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/tpbconv /usr/src/tmp/gromacs-buildroot/usr/bin/./tpbconv_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p pdb2gmx '/usr/src/tmp/gromacs-buildroot/usr/bin/./pdb2gmx_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/pdb2gmx /usr/src/tmp/gromacs-buildroot/usr/bin/./pdb2gmx_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p protonate '/usr/src/tmp/gromacs-buildroot/usr/bin/./protonate_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/protonate /usr/src/tmp/gromacs-buildroot/usr/bin/./protonate_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p luck '/usr/src/tmp/gromacs-buildroot/usr/bin/./luck_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/luck /usr/src/tmp/gromacs-buildroot/usr/bin/./luck_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p gmxdump '/usr/src/tmp/gromacs-buildroot/usr/bin/./gmxdump_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/gmxdump /usr/src/tmp/gromacs-buildroot/usr/bin/./gmxdump_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p gmxcheck '/usr/src/tmp/gromacs-buildroot/usr/bin/./gmxcheck_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/gmxcheck /usr/src/tmp/gromacs-buildroot/usr/bin/./gmxcheck_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p x2top '/usr/src/tmp/gromacs-buildroot/usr/bin/./x2top_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/x2top /usr/src/tmp/gromacs-buildroot/usr/bin/./x2top_mpi_d make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/kernel' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/kernel' Making install in tools make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/tools' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/tools' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/lib64' /bin/sh ../../libtool --mode=install /bin/install -p libgmxana_mpi_d.la '/usr/src/tmp/gromacs-buildroot/usr/lib64' libtool: install: warning: relinking `libgmxana_mpi_d.la' (cd /usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/tools; /bin/sh ../../libtool --tag=CC --mode=relink mpicc -g -pipe -O2 -Wall -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wa,--noexecstack -version-info 5:0:0 -Wl,-Rpath:/usr/lib64/openmpi/lib -Wa,--noexecstack -fPIC -L../gmxlib/.libs -L../mdlib/.libs -L/usr/lib64/openmpi/lib -o libgmxana_mpi_d.la -rpath /usr/lib64 autocorr.lo expfit.lo polynomials.lo levenmar.lo anadih.lo pp2shift.lo dlist.lo eigio.lo lsq.lo cmat.lo eigensolver.lo nsc.lo hxprops.lo fitahx.lo gmx_analyze.lo gmx_anaeig.lo gmx_angle.lo gmx_bond.lo gmx_bundle.lo gmx_chi.lo gmx_cluster.lo gmx_confrms.lo gmx_covar.lo gmx_current.lo gmx_density.lo gmx_densmap.lo gmx_dih.lo gmx_dielectric.lo gmx_kinetics.lo gmx_spatial.lo gmx_dipoles.lo gmx_disre.lo gmx_dist.lo gmx_dyndom.lo gmx_enemat.lo gmx_energy.lo gmx_lie.lo gmx_filter.lo gmx_gyrate.lo gmx_h2order.lo gmx_hbond.lo gmx_helix.lo gmx_mindist.lo gmx_msd.lo gmx_morph.lo gmx_nmeig.lo gmx_nmens.lo gmx_order.lo gmx_principal.lo gmx_polystat.lo gmx_potential.lo gmx_rama.lo gmx_rdf.lo gmx_rms.lo gmx_rmsdist.lo gmx_rmsf.lo gmx_rotacf.lo gmx_saltbr.lo gmx_sas.lo gmx_sdf.lo gmx_sgangle.lo gmx_sorient.lo gmx_spol.lo gmx_tcaf.lo gmx_traj.lo gmx_velacc.lo gmx_helixorient.lo gmx_clustsize.lo gmx_mdmat.lo gmx_wham.lo correl.lo gmx_sham.lo gmx_nmtraj.lo gmx_trjconv.lo gmx_trjcat.lo gmx_trjorder.lo gmx_xpm2ps.lo gmx_editconf.lo gmx_genbox.lo gmx_genion.lo gmx_genconf.lo gmx_genpr.lo gmx_eneconv.lo gmx_vanhove.lo gmx_wheel.lo addconf.lo calcpot.lo edittop.lo ../gmxlib/libgmx_mpi_d.la ../mdlib/libmd_mpi_d.la -lgsl -lnsl -lfftw3 -lm -lopenblas -llapack -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -lmpi -lopen-pal -lopen-rte -inst-prefix-dir /usr/src/tmp/gromacs-buildroot) mpicc -shared .libs/autocorr.o .libs/expfit.o .libs/polynomials.o .libs/levenmar.o .libs/anadih.o .libs/pp2shift.o .libs/dlist.o .libs/eigio.o .libs/lsq.o .libs/cmat.o .libs/eigensolver.o .libs/nsc.o .libs/hxprops.o .libs/fitahx.o .libs/gmx_analyze.o .libs/gmx_anaeig.o .libs/gmx_angle.o .libs/gmx_bond.o .libs/gmx_bundle.o .libs/gmx_chi.o .libs/gmx_cluster.o .libs/gmx_confrms.o .libs/gmx_covar.o .libs/gmx_current.o .libs/gmx_density.o .libs/gmx_densmap.o .libs/gmx_dih.o .libs/gmx_dielectric.o .libs/gmx_kinetics.o .libs/gmx_spatial.o .libs/gmx_dipoles.o .libs/gmx_disre.o .libs/gmx_dist.o .libs/gmx_dyndom.o .libs/gmx_enemat.o .libs/gmx_energy.o .libs/gmx_lie.o .libs/gmx_filter.o .libs/gmx_gyrate.o .libs/gmx_h2order.o .libs/gmx_hbond.o .libs/gmx_helix.o .libs/gmx_mindist.o .libs/gmx_msd.o .libs/gmx_morph.o .libs/gmx_nmeig.o .libs/gmx_nmens.o .libs/gmx_order.o .libs/gmx_principal.o .libs/gmx_polystat.o .libs/gmx_potential.o .libs/gmx_rama.o .libs/gmx_rdf.o .libs/gmx_rms.o .libs/gmx_rmsdist.o .libs/gmx_rmsf.o .libs/gmx_rotacf.o .libs/gmx_saltbr.o .libs/gmx_sas.o .libs/gmx_sdf.o .libs/gmx_sgangle.o .libs/gmx_sorient.o .libs/gmx_spol.o .libs/gmx_tcaf.o .libs/gmx_traj.o .libs/gmx_velacc.o .libs/gmx_helixorient.o .libs/gmx_clustsize.o .libs/gmx_mdmat.o .libs/gmx_wham.o .libs/correl.o .libs/gmx_sham.o .libs/gmx_nmtraj.o .libs/gmx_trjconv.o .libs/gmx_trjcat.o .libs/gmx_trjorder.o .libs/gmx_xpm2ps.o .libs/gmx_editconf.o .libs/gmx_genbox.o .libs/gmx_genion.o .libs/gmx_genconf.o .libs/gmx_genpr.o .libs/gmx_eneconv.o .libs/gmx_vanhove.o .libs/gmx_wheel.o .libs/addconf.o .libs/calcpot.o .libs/edittop.o -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs -L/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs -L/usr/lib64/openmpi/lib -L/usr/src/tmp/gromacs-buildroot/usr/lib64 -L/usr/lib64 -lgsl -lnsl -lfftw3 -lSM -lICE -lX11 -L/usr/lib64/gcc/x86_64-alt-linux/5 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/5/../../.. -lopenblas -llapack -lgfortran -lm -lquadmath -lgmx_mpi_d -lmd_mpi_d -L/usr/src/tmp/gromacs-buildroot/usr/lib64/openmpi/lib -lmpi -lopen-pal -lopen-rte -Wl,-Rpath:/usr/lib64/openmpi/lib/ -Wl,-Rpath:/usr/lib64/openmpi/lib -Wl,-soname -Wl,libgmxana_mpi_d.so.5 -o .libs/libgmxana_mpi_d.so.5.0.0 /bin/install -p .libs/libgmxana_mpi_d.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5.0.0 (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmxana_mpi_d.so.5.0.0 libgmxana_mpi_d.so.5 || { rm -f libgmxana_mpi_d.so.5 && ln -s libgmxana_mpi_d.so.5.0.0 libgmxana_mpi_d.so.5; }; }) (cd /usr/src/tmp/gromacs-buildroot/usr/lib64 && { ln -s -f libgmxana_mpi_d.so.5.0.0 libgmxana_mpi_d.so || { rm -f libgmxana_mpi_d.so && ln -s libgmxana_mpi_d.so.5.0.0 libgmxana_mpi_d.so; }; }) /bin/install -p .libs/libgmxana_mpi_d.lai /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p do_dssp '/usr/src/tmp/gromacs-buildroot/usr/bin/./do_dssp_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/do_dssp /usr/src/tmp/gromacs-buildroot/usr/bin/./do_dssp_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p editconf '/usr/src/tmp/gromacs-buildroot/usr/bin/./editconf_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/editconf /usr/src/tmp/gromacs-buildroot/usr/bin/./editconf_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p eneconv '/usr/src/tmp/gromacs-buildroot/usr/bin/./eneconv_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/eneconv /usr/src/tmp/gromacs-buildroot/usr/bin/./eneconv_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p genbox '/usr/src/tmp/gromacs-buildroot/usr/bin/./genbox_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genbox /usr/src/tmp/gromacs-buildroot/usr/bin/./genbox_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p genconf '/usr/src/tmp/gromacs-buildroot/usr/bin/./genconf_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genconf /usr/src/tmp/gromacs-buildroot/usr/bin/./genconf_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p genrestr '/usr/src/tmp/gromacs-buildroot/usr/bin/./genrestr_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genrestr /usr/src/tmp/gromacs-buildroot/usr/bin/./genrestr_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_nmtraj '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmtraj_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmtraj /usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmtraj_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p make_ndx '/usr/src/tmp/gromacs-buildroot/usr/bin/./make_ndx_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/make_ndx /usr/src/tmp/gromacs-buildroot/usr/bin/./make_ndx_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p mk_angndx '/usr/src/tmp/gromacs-buildroot/usr/bin/./mk_angndx_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/mk_angndx /usr/src/tmp/gromacs-buildroot/usr/bin/./mk_angndx_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p trjcat '/usr/src/tmp/gromacs-buildroot/usr/bin/./trjcat_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjcat /usr/src/tmp/gromacs-buildroot/usr/bin/./trjcat_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p trjconv '/usr/src/tmp/gromacs-buildroot/usr/bin/./trjconv_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjconv /usr/src/tmp/gromacs-buildroot/usr/bin/./trjconv_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p trjorder '/usr/src/tmp/gromacs-buildroot/usr/bin/./trjorder_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/trjorder /usr/src/tmp/gromacs-buildroot/usr/bin/./trjorder_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p wheel '/usr/src/tmp/gromacs-buildroot/usr/bin/./wheel_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/wheel /usr/src/tmp/gromacs-buildroot/usr/bin/./wheel_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p xpm2ps '/usr/src/tmp/gromacs-buildroot/usr/bin/./xpm2ps_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/xpm2ps /usr/src/tmp/gromacs-buildroot/usr/bin/./xpm2ps_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p genion '/usr/src/tmp/gromacs-buildroot/usr/bin/./genion_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/genion /usr/src/tmp/gromacs-buildroot/usr/bin/./genion_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p anadock '/usr/src/tmp/gromacs-buildroot/usr/bin/./anadock_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/anadock /usr/src/tmp/gromacs-buildroot/usr/bin/./anadock_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p make_edi '/usr/src/tmp/gromacs-buildroot/usr/bin/./make_edi_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/make_edi /usr/src/tmp/gromacs-buildroot/usr/bin/./make_edi_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_analyze '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_analyze_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_analyze /usr/src/tmp/gromacs-buildroot/usr/bin/./g_analyze_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_anaeig '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_anaeig_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_anaeig /usr/src/tmp/gromacs-buildroot/usr/bin/./g_anaeig_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_angle '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_angle_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_angle /usr/src/tmp/gromacs-buildroot/usr/bin/./g_angle_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_bond '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_bond_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_bond /usr/src/tmp/gromacs-buildroot/usr/bin/./g_bond_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_bundle '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_bundle_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_bundle /usr/src/tmp/gromacs-buildroot/usr/bin/./g_bundle_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_chi '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_chi_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_chi /usr/src/tmp/gromacs-buildroot/usr/bin/./g_chi_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_cluster '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_cluster_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_cluster /usr/src/tmp/gromacs-buildroot/usr/bin/./g_cluster_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_confrms '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_confrms_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_confrms /usr/src/tmp/gromacs-buildroot/usr/bin/./g_confrms_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_covar '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_covar_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_covar /usr/src/tmp/gromacs-buildroot/usr/bin/./g_covar_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_current '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_current_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_current /usr/src/tmp/gromacs-buildroot/usr/bin/./g_current_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_density '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_density_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_density /usr/src/tmp/gromacs-buildroot/usr/bin/./g_density_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_densmap '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_densmap_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_densmap /usr/src/tmp/gromacs-buildroot/usr/bin/./g_densmap_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_dih '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dih_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dih /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dih_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_dielectric '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dielectric_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dielectric /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dielectric_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_helixorient '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_helixorient_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_helixorient /usr/src/tmp/gromacs-buildroot/usr/bin/./g_helixorient_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_principal '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_principal_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_principal /usr/src/tmp/gromacs-buildroot/usr/bin/./g_principal_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_dipoles '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dipoles_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dipoles /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dipoles_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_disre '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_disre_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_disre /usr/src/tmp/gromacs-buildroot/usr/bin/./g_disre_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_dist '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dist_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dist /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dist_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_dyndom '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_dyndom_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_dyndom /usr/src/tmp/gromacs-buildroot/usr/bin/./g_dyndom_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_enemat '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_enemat_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_enemat /usr/src/tmp/gromacs-buildroot/usr/bin/./g_enemat_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_energy '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_energy_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_energy /usr/src/tmp/gromacs-buildroot/usr/bin/./g_energy_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_lie '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_lie_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_lie /usr/src/tmp/gromacs-buildroot/usr/bin/./g_lie_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_filter '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_filter_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_filter /usr/src/tmp/gromacs-buildroot/usr/bin/./g_filter_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_gyrate '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_gyrate_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_gyrate /usr/src/tmp/gromacs-buildroot/usr/bin/./g_gyrate_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_h2order '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_h2order_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_h2order /usr/src/tmp/gromacs-buildroot/usr/bin/./g_h2order_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_hbond '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_hbond_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_hbond /usr/src/tmp/gromacs-buildroot/usr/bin/./g_hbond_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_helix '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_helix_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_helix /usr/src/tmp/gromacs-buildroot/usr/bin/./g_helix_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_mindist '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_mindist_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_mindist /usr/src/tmp/gromacs-buildroot/usr/bin/./g_mindist_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_msd '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_msd_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_msd /usr/src/tmp/gromacs-buildroot/usr/bin/./g_msd_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_morph '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_morph_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_morph /usr/src/tmp/gromacs-buildroot/usr/bin/./g_morph_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_nmeig '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmeig_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmeig /usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmeig_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_nmens '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmens_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_nmens /usr/src/tmp/gromacs-buildroot/usr/bin/./g_nmens_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_order '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_order_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_order /usr/src/tmp/gromacs-buildroot/usr/bin/./g_order_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_polystat '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_polystat_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_polystat /usr/src/tmp/gromacs-buildroot/usr/bin/./g_polystat_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_potential '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_potential_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_potential /usr/src/tmp/gromacs-buildroot/usr/bin/./g_potential_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_rama '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rama_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rama /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rama_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_rdf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rdf_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rdf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rdf_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_rms '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rms_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rms /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rms_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_rmsdist '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsdist_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rmsdist /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsdist_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_rmsf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsf_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rmsf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rmsf_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_rotacf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_rotacf_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_rotacf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_rotacf_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_saltbr '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_saltbr_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_saltbr /usr/src/tmp/gromacs-buildroot/usr/bin/./g_saltbr_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_sas '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sas_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sas /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sas_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_sgangle '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sgangle_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sgangle /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sgangle_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_sham '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sham_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sham /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sham_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_sorient '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sorient_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sorient /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sorient_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_spol '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_spol_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_spol /usr/src/tmp/gromacs-buildroot/usr/bin/./g_spol_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_sdf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_sdf_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_sdf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_sdf_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_spatial '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_spatial_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_spatial /usr/src/tmp/gromacs-buildroot/usr/bin/./g_spatial_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_tcaf '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_tcaf_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_tcaf /usr/src/tmp/gromacs-buildroot/usr/bin/./g_tcaf_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_traj '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_traj_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_traj /usr/src/tmp/gromacs-buildroot/usr/bin/./g_traj_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_vanhove '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_vanhove_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_vanhove /usr/src/tmp/gromacs-buildroot/usr/bin/./g_vanhove_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_velacc '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_velacc_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_velacc /usr/src/tmp/gromacs-buildroot/usr/bin/./g_velacc_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_clustsize '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_clustsize_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_clustsize /usr/src/tmp/gromacs-buildroot/usr/bin/./g_clustsize_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_mdmat '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_mdmat_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_mdmat /usr/src/tmp/gromacs-buildroot/usr/bin/./g_mdmat_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_wham '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_wham_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_wham /usr/src/tmp/gromacs-buildroot/usr/bin/./g_wham_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p g_kinetics '/usr/src/tmp/gromacs-buildroot/usr/bin/./g_kinetics_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/g_kinetics /usr/src/tmp/gromacs-buildroot/usr/bin/./g_kinetics_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p sigeps '/usr/src/tmp/gromacs-buildroot/usr/bin/./sigeps_mpi_d' libtool: install: warning: `libgmxana_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/gmxlib/.libs/libgmx_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/mdlib/.libs/libmd_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/sigeps /usr/src/tmp/gromacs-buildroot/usr/bin/./sigeps_mpi_d make install-exec-hook make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/tools' libname="libgmxana_mpi_d"; \ nompi="`echo $libname | sed -e 's,_mpi,,'`"; \ libdir="/usr/lib64"; \ if echo $libname | grep mpi >/dev/null ; then \ (cd $libdir && test -e $libname.a -a ! -e $nompi.a && ln -s $libname.a $nompi.a ; exit 0); \ (cd $libdir && test -e $libname.so -a ! -e $nompi.so && ln -s $libname.so $nompi.so ; exit 0); \ fi; make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/tools' make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/tools' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/tools' Making install in ngmx make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/ngmx' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/ngmx' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/sh ../../libtool --mode=install /bin/install -p ngmx '/usr/src/tmp/gromacs-buildroot/usr/bin/./ngmx_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/ngmx /usr/src/tmp/gromacs-buildroot/usr/bin/./ngmx_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p xrama '/usr/src/tmp/gromacs-buildroot/usr/bin/./xrama_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/xrama /usr/src/tmp/gromacs-buildroot/usr/bin/./xrama_mpi_d /bin/sh ../../libtool --mode=install /bin/install -p highway '/usr/src/tmp/gromacs-buildroot/usr/bin/./highway_mpi_d' libtool: install: warning: `../mdlib/libmd_mpi_d.la' has not been installed in `/usr/lib64' libtool: install: warning: `../gmxlib/libgmx_mpi_d.la' has not been installed in `/usr/lib64' /bin/install -p .libs/highway /usr/src/tmp/gromacs-buildroot/usr/bin/./highway_mpi_d make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/ngmx' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/ngmx' Making install in contrib make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/contrib' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/contrib' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/contrib' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src/contrib' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/src' Making install in admin make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/admin' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/admin' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/admin' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/admin' Making install in scripts make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/scripts' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/scripts' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/install -p GMXRC GMXRC.csh GMXRC.bash GMXRC.zsh '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/bin' /bin/install -p ../../scripts/completion.csh ../../scripts/completion.bash ../../scripts/completion.zsh ../../scripts/demux.pl ../../scripts/xplor2gmx.pl '/usr/src/tmp/gromacs-buildroot/usr/bin' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/scripts' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/scripts' Making install in share make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' Making install in top make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/top' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/top' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffgmx.itp ../../../share/top/ffgmxnb.itp ../../../share/top/ffgmxbon.itp ../../../share/top/ffgmx.atp ../../../share/top/ffgmx.hdb ../../../share/top/ffgmx.rtp ../../../share/top/ffgmx-c.tdb ../../../share/top/ffgmx-n.tdb ../../../share/top/ffgmx2.itp ../../../share/top/ffgmx2nb.itp ../../../share/top/ffgmx2bon.itp ../../../share/top/ffgmx2.atp ../../../share/top/ffgmx2.hdb ../../../share/top/ffgmx2.rtp ../../../share/top/ffgmx2-c.tdb ../../../share/top/ffgmx2-n.tdb ../../../share/top/ffG43a1.itp ../../../share/top/ffG43a1nb.itp ../../../share/top/ffG43a1bon.itp ../../../share/top/ffG43a1.atp ../../../share/top/ffG43a1.hdb ../../../share/top/ffG43a1.rtp ../../../share/top/ffG43a1-c.tdb ../../../share/top/ffG43a1-n.tdb ../../../share/top/ffG43a2.itp ../../../share/top/ffG43a2nb.itp ../../../share/top/ffG43a2bon.itp ../../../share/top/ffG43a2.atp ../../../share/top/ffG43a2.hdb ../../../share/top/ffG43a2.rtp ../../../share/top/ffG43a2-c.tdb ../../../share/top/ffG43a2-n.tdb ../../../share/top/ffgmx.ddb ../../../share/top/ffgmx2.ddb ../../../share/top/ffG43a1.ddb ../../../share/top/ffG43a2.ddb ../../../share/top/ffG45a3-c.tdb ../../../share/top/ffG45a3.atp ../../../share/top/ffG45a3.hdb ../../../share/top/ffG45a3.rtp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffG45a3nb.itp ../../../share/top/ffG45a3-n.tdb ../../../share/top/ffG45a3.ddb ../../../share/top/ffG45a3.itp ../../../share/top/ffG45a3bon.itp ../../../share/top/ffG53a5-c.tdb ../../../share/top/ffG53a5.atp ../../../share/top/ffG53a5.hdb ../../../share/top/ffG53a5.rtp ../../../share/top/ffG53a5nb.itp ../../../share/top/ffG53a5-n.tdb ../../../share/top/ffG53a5.ddb ../../../share/top/ffG53a5.itp ../../../share/top/ffG53a5bon.itp ../../../share/top/ffG53a5.n2t ../../../share/top/ffG53a6-c.tdb ../../../share/top/ffG53a6.atp ../../../share/top/ffG53a6.hdb ../../../share/top/ffG53a6.rtp ../../../share/top/ffG53a6nb.itp ../../../share/top/ffG53a6-n.tdb ../../../share/top/ffG53a6.ddb ../../../share/top/ffG53a6.itp ../../../share/top/ffG53a6bon.itp ../../../share/top/ffoplsaa.atp ../../../share/top/ffoplsaa.itp ../../../share/top/ffoplsaabon.itp ../../../share/top/ffoplsaanb.itp ../../../share/top/ffoplsaa.hdb ../../../share/top/ffoplsaa-n.tdb ../../../share/top/ffoplsaa-c.tdb ../../../share/top/ffoplsaa.rtp ../../../share/top/ffoplsaa.ddb ../../../share/top/ffoplsaa.n2t ../../../share/top/ffencads-c.tdb ../../../share/top/ffencads.itp ../../../share/top/ffencadv-c.tdb ../../../share/top/ffencadv.itp ../../../share/top/ffencads-n.tdb ../../../share/top/ffencads.rtp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/ffencadv-n.tdb ../../../share/top/ffencadv.rtp ../../../share/top/ffencads.atp ../../../share/top/ffencadsbon.itp ../../../share/top/ffencadv.atp ../../../share/top/ffencadvbon.itp ../../../share/top/ffencads.hdb ../../../share/top/ffencadsnb.itp ../../../share/top/ffencadv.hdb ../../../share/top/ffencadvnb.itp ../../../share/top/1mlg.itp ../../../share/top/2mlg.itp ../../../share/top/benzamide.itp ../../../share/top/bondadd.itp ../../../share/top/buck.itp ../../../share/top/decane.itp ../../../share/top/dlg.itp ../../../share/top/dmso.itp ../../../share/top/fa.itp ../../../share/top/ff_dum.itp ../../../share/top/flexspc.itp ../../../share/top/flexspce.itp ../../../share/top/flexwat-ferguson.itp ../../../share/top/h2p4o13.itp ../../../share/top/h2p8o25.itp ../../../share/top/h2po4.itp ../../../share/top/ions.itp ../../../share/top/methanol.itp ../../../share/top/spc.itp ../../../share/top/spce.itp ../../../share/top/tfe.itp ../../../share/top/tip3p.itp ../../../share/top/tip4p.itp ../../../share/top/urea.itp ../../../share/top/dgsolv.dat ../../../share/top/electroneg.dat ../../../share/top/dec50.gro ../../../share/top/dmso.gro ../../../share/top/spc216.gro ../../../share/top/tip4p.gro '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' /bin/install -p -m 644 ../../../share/top/urea+h2o.gro ../../../share/top/f3c.itp ../../../share/top/aminoacids.dat ../../../share/top/atommass.dat ../../../share/top/bromacs.dat ../../../share/top/ca-shift.dat ../../../share/top/cb-shift.dat ../../../share/top/co-shift.dat ../../../share/top/edissoc.dat ../../../share/top/FF.dat ../../../share/top/gurgle.dat ../../../share/top/ha-shift.dat ../../../share/top/links.dat ../../../share/top/phbres.dat ../../../share/top/random.dat ../../../share/top/refi_aa.dat ../../../share/top/specbond.dat ../../../share/top/surface.dat ../../../share/top/vdwradii.dat ../../../share/top/xlateat.dat ../../../share/top/highway.dat ../../../share/top/export.dlg ../../../share/top/bonds.dlg ../../../share/top/ss.map ../../../share/top/ps.m2p ../../../share/top/table6-10.xvg ../../../share/top/table6-11.xvg ../../../share/top/table6-12.xvg ../../../share/top/table6-8.xvg ../../../share/top/table6-9.xvg ../../../share/top/atom_nom.tbl ../../../share/top/gromacs.dtd ../../../share/top/tip5p.gro ../../../share/top/tip5p.itp ../../../share/top/sw.itp ../../../share/top/elements.dat '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/top' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/top' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/top' Making install in tutor make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' Making install in nmr1 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr1' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr1' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr1' /bin/install -p -m 644 ../../../../share/tutor/nmr1/conf.gro ../../../../share/tutor/nmr1/grompp.mdp ../../../../share/tutor/nmr1/pep.pdb ../../../../share/tutor/nmr1/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr1' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr1' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr1' Making install in nmr2 make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr2' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr2' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr2' /bin/install -p -m 644 ../../../../share/tutor/nmr2/conf.gro ../../../../share/tutor/nmr2/genconf.gcp ../../../../share/tutor/nmr2/grompp.mdp ../../../../share/tutor/nmr2/pep.pdb ../../../../share/tutor/nmr2/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/nmr2' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr2' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/nmr2' Making install in speptide make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/speptide' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/speptide' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/speptide' /bin/install -p -m 644 ../../../../share/tutor/speptide/em.mdp ../../../../share/tutor/speptide/full.mdp ../../../../share/tutor/speptide/pr.mdp ../../../../share/tutor/speptide/speptide.pdb '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/speptide' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/speptide' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/speptide' Making install in water make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/water' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/water' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/water' /bin/install -p -m 644 ../../../../share/tutor/water/index.ndx ../../../../share/tutor/water/conf.gro ../../../../share/tutor/water/spc216.pdb ../../../../share/tutor/water/grompp.mdp ../../../../share/tutor/water/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/water' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/water' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/water' Making install in gmxdemo make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/gmxdemo' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/gmxdemo' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/install -p -m 644 ../../../../share/tutor/gmxdemo/cpeptide.pdb '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo' /bin/install -p ../../../../share/tutor/gmxdemo/demo '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/gmxdemo/./demo_mpi_d' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/gmxdemo' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/gmxdemo' Making install in methanol make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/methanol' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/methanol' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/methanol' /bin/install -p -m 644 ../../../../share/tutor/methanol/index.ndx ../../../../share/tutor/methanol/conf.gro ../../../../share/tutor/methanol/methanol.pdb ../../../../share/tutor/methanol/grompp.mdp ../../../../share/tutor/methanol/topol.top ../../../../share/tutor/methanol/methanol.itp '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/methanol' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/methanol' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/methanol' Making install in mixed make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/mixed' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/mixed' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/mixed' /bin/install -p -m 644 ../../../../share/tutor/mixed/index.ndx ../../../../share/tutor/mixed/conf.gro ../../../../share/tutor/mixed/mixed.pdb ../../../../share/tutor/mixed/grompp.mdp ../../../../share/tutor/mixed/topol.top '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/tutor/mixed' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/mixed' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor/mixed' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/tutor' Making install in template make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/template' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/template' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/template' /bin/install -p -m 644 ../../../share/template/template.c ../../../share/template/README Makefile.x86_64-alt-linux-gnu_double '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/template' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/template' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/template' Making install in html make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' Making install in . make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html' /bin/install -p -m 644 ../../../share/html/online.html ../../../share/html/gmxfaq.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' Making install in images make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/images' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/images' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/images' /bin/install -p -m 644 ../../../../share/html/images/features.gif ../../../../share/html/images/flow_leftrightup.gif ../../../../share/html/images/flow_vrule.gif ../../../../share/html/images/flow_down.gif ../../../../share/html/images/flow_leftup.gif ../../../../share/html/images/links.gif ../../../../share/html/images/articles.gif ../../../../share/html/images/flow_downleft.gif ../../../../share/html/images/flow_right+left.gif ../../../../share/html/images/mail.gif ../../../../share/html/images/bench.gif ../../../../share/html/images/flow_hline.gif ../../../../share/html/images/flow_right.gif ../../../../share/html/images/manual.gif ../../../../share/html/images/charts_down.gif ../../../../share/html/images/flow_left.gif ../../../../share/html/images/flow_rightleftdown.gif ../../../../share/html/images/gmxlogo_small.jpg ../../../../share/html/images/charts_up.gif ../../../../share/html/images/flow_leftright.gif ../../../../share/html/images/flow_uprightleft.gif ../../../../share/html/images/software.gif ../../../../share/html/images/faq.gif ../../../../share/html/images/flow_leftrightdown.gif ../../../../share/html/images/flow_vline.gif ../../../../share/html/images/topologies.gif ../../../../share/html/images/plotje.gif ../../../../share/html/images/xvgr.gif ../../../../share/html/images/1ctf-0.jpg ../../../../share/html/images/1ctf-0.2.jpg ../../../../share/html/images/1ctf-0.5.jpg ../../../../share/html/images/1ctf-1.jpg ../../../../share/html/images/1ctf-4.jpg ../../../../share/html/images/1ctf-10.jpg '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/images' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/images' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/images' Making install in online make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/online' make[4]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/online' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/cpt.html ../../../../share/html/online/dat.html ../../../../share/html/online/g_disre.html ../../../../share/html/online/g_sorient.html ../../../../share/html/online/ndx.html ../../../../share/html/online/dlg.html ../../../../share/html/online/g_dist.html ../../../../share/html/online/g_tcaf.html ../../../../share/html/online/ngmx.html ../../../../share/html/online/do_dssp.html ../../../../share/html/online/g_dyndom.html ../../../../share/html/online/g_traj.html ../../../../share/html/online/edi.html ../../../../share/html/online/g_enemat.html ../../../../share/html/online/g_velacc.html ../../../../share/html/online/options.html ../../../../share/html/online/editconf.html ../../../../share/html/online/g_energy.html ../../../../share/html/online/genbox.html ../../../../share/html/online/out.html ../../../../share/html/online/edo.html ../../../../share/html/online/g_gyrate.html ../../../../share/html/online/genconf.html ../../../../share/html/online/pdb.html ../../../../share/html/online/edr.html ../../../../share/html/online/g_h2order.html ../../../../share/html/online/genion.html ../../../../share/html/online/pdb2gmx.html ../../../../share/html/online/ene.html ../../../../share/html/online/g_hbond.html ../../../../share/html/online/genpr.html ../../../../share/html/online/protonate.html ../../../../share/html/online/eneconv.html ../../../../share/html/online/g_helix.html ../../../../share/html/online/getting_started.html ../../../../share/html/online/rtp.html ../../../../share/html/online/eps.html ../../../../share/html/online/g_lie.html ../../../../share/html/online/gmxcheck.html ../../../../share/html/online/tex.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/files.html ../../../../share/html/online/g_mdmat.html ../../../../share/html/online/gmxdump.html ../../../../share/html/online/top.html ../../../../share/html/online/flow.html ../../../../share/html/online/g_mindist.html ../../../../share/html/online/gro.html ../../../../share/html/online/tpa.html ../../../../share/html/online/g87.html ../../../../share/html/online/g_morph.html ../../../../share/html/online/grompp.html ../../../../share/html/online/tpb.html ../../../../share/html/online/g96.html ../../../../share/html/online/g_msd.html ../../../../share/html/online/hat.html ../../../../share/html/online/tpbconv.html ../../../../share/html/online/g_anaeig.html ../../../../share/html/online/g_nmeig.html ../../../../share/html/online/highway.html ../../../../share/html/online/tpr.html ../../../../share/html/online/g_analyze.html ../../../../share/html/online/g_nmens.html ../../../../share/html/online/include_bot.html ../../../../share/html/online/trj.html ../../../../share/html/online/g_angle.html ../../../../share/html/online/g_order.html ../../../../share/html/online/include_top.html ../../../../share/html/online/trjcat.html ../../../../share/html/online/g_bond.html ../../../../share/html/online/g_potential.html ../../../../share/html/online/itp.html ../../../../share/html/online/trjconv.html ../../../../share/html/online/g_bundle.html ../../../../share/html/online/g_rama.html ../../../../share/html/online/log.html ../../../../share/html/online/trjorder.html ../../../../share/html/online/g_chi.html ../../../../share/html/online/g_rdf.html ../../../../share/html/online/m2p.html ../../../../share/html/online/trr.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' /bin/install -p -m 644 ../../../../share/html/online/g_cluster.html ../../../../share/html/online/g_rms.html ../../../../share/html/online/make_ndx.html ../../../../share/html/online/wheel.html ../../../../share/html/online/g_confrms.html ../../../../share/html/online/g_rmsdist.html ../../../../share/html/online/map.html ../../../../share/html/online/x2top.html ../../../../share/html/online/g_covar.html ../../../../share/html/online/g_rmsf.html ../../../../share/html/online/mdp.html ../../../../share/html/online/xpm.html ../../../../share/html/online/g_density.html ../../../../share/html/online/g_rotacf.html ../../../../share/html/online/mdp_opt.html ../../../../share/html/online/xpm2ps.html ../../../../share/html/online/g_dielectric.html ../../../../share/html/online/g_saltbr.html ../../../../share/html/online/mdrun.html ../../../../share/html/online/xrama.html ../../../../share/html/online/g_dih.html ../../../../share/html/online/g_sas.html ../../../../share/html/online/mk_angndx.html ../../../../share/html/online/xtc.html ../../../../share/html/online/g_dipoles.html ../../../../share/html/online/g_sgangle.html ../../../../share/html/online/mtx.html ../../../../share/html/online/xvg.html ../../../../share/html/online/g_densmap.html ../../../../share/html/online/g_sham.html ../../../../share/html/online/make_edi.html ../../../../share/html/online/style.css ../../../../share/html/online/water.html ../../../../share/html/online/gmxdemo.html ../../../../share/html/online/speptide.html ../../../../share/html/online/yourown.html ../../../../share/html/online/methanol.html ../../../../share/html/online/mixed.html ../../../../share/html/online/protunf.html '/usr/src/tmp/gromacs-buildroot/usr/share/gromacs/html/online' make[4]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/online' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html/online' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share/html' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/share' Making install in man make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' Making install in man1 make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man/man1' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man/man1' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1' /bin/install -p -m 644 '../../../man/man1/anadock.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/anadock_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/do_dssp.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/do_dssp_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/editconf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/editconf_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/eneconv.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/eneconv_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_anaeig.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_anaeig_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_analyze.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_analyze_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_angle.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_angle_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_bond.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_bond_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_bundle.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_bundle_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_chi.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_chi_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_cluster.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_cluster_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_clustsize.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_clustsize_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_confrms.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_confrms_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_covar.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_covar_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_current.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_current_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_density.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_density_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_densmap.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_densmap_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_dielectric.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dielectric_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_dih.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dih_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_dipoles.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dipoles_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_disre.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_disre_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_dist.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dist_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_dyndom.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_dyndom_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_enemat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_enemat_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_energy.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_energy_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_filter.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_filter_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_gyrate.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_gyrate_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_h2order.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_h2order_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_hbond.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_hbond_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_helix.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_helix_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_helixorient.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_helixorient_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_kinetics.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_kinetics_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_lie.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_lie_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_mdmat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mdmat_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_mindist.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mindist_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_morph.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_morph_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_msd.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_msd_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_nmeig.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_nmeig_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_nmens.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_nmens_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_nmtraj.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_nmtraj_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_order.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_order_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_polystat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_polystat_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_potential.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_potential_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_principal.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_principal_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_rama.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rama_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_rdf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rdf_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_rms.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rms_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_rmsdist.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rmsdist_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_rmsf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rmsf_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_rotacf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_rotacf_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_saltbr.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_saltbr_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_sas.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sas_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_sdf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sdf_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_sgangle.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sgangle_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_sham.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sham_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_sorient.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sorient_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_spatial.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_spatial_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_spol.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_spol_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_tcaf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_tcaf_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_traj.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_traj_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_vanhove.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_vanhove_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_velacc.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_velacc_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/g_wham.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_wham_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/gen_table.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gen_table_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/genbox.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genbox_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/genconf.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genconf_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/genion.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genion_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/genrestr.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genrestr_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/gmxcheck.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxcheck_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/gmxdump.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxdump_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/grompp.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/grompp_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/highway.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/highway_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/make_edi.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_edi_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/make_ndx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_ndx_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/mdrun.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mdrun_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/mk_angndx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mk_angndx_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/ngmx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/ngmx_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/pdb2gmx.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/pdb2gmx_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/protonate.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/protonate_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/sigeps.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/sigeps_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/tpbconv.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/tpbconv_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/trjcat.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjcat_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/trjconv.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjconv_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/trjorder.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjorder_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/wheel.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/wheel_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/x2top.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/x2top_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/xpm2ps.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xpm2ps_mpi_d.1' /bin/install -p -m 644 '../../../man/man1/xrama.1' '/usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xrama_mpi_d.1' make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man/man1' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man/man1' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double/man' make[1]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' make[2]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' make install-exec-hook make[3]: Entering directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' GROMACS is installed under /usr. Make sure to update your PATH and MANPATH to find the programs and unix manual pages, and possibly LD_LIBRARY_PATH or /etc/ld.so.conf if you are using dynamic libraries. Please run "make tests" now to verify your installation. If you want links to the executables in /usr/local/bin, you can issue "make links" now. make[3]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' make[1]: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' make: Leaving directory `/usr/src/RPM/BUILD/gromacs-4.0.7/mpi-double' + popd ~/RPM/BUILD/gromacs-4.0.7 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/anadock /usr/src/tmp/gromacs-buildroot/usr/bin/g_anadock + mv /usr/src/tmp/gromacs-buildroot/usr/bin/anadock_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_anadock_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/do_dssp /usr/src/tmp/gromacs-buildroot/usr/bin/g_do_dssp + mv /usr/src/tmp/gromacs-buildroot/usr/bin/do_dssp_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_do_dssp_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/editconf /usr/src/tmp/gromacs-buildroot/usr/bin/g_editconf + mv /usr/src/tmp/gromacs-buildroot/usr/bin/editconf_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_editconf_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/eneconv /usr/src/tmp/gromacs-buildroot/usr/bin/g_eneconv + mv /usr/src/tmp/gromacs-buildroot/usr/bin/eneconv_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_eneconv_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/genbox /usr/src/tmp/gromacs-buildroot/usr/bin/g_genbox + mv /usr/src/tmp/gromacs-buildroot/usr/bin/genbox_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_genbox_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/genconf /usr/src/tmp/gromacs-buildroot/usr/bin/g_genconf + mv /usr/src/tmp/gromacs-buildroot/usr/bin/genconf_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_genconf_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/genion /usr/src/tmp/gromacs-buildroot/usr/bin/g_genion + mv /usr/src/tmp/gromacs-buildroot/usr/bin/genion_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_genion_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/genrestr /usr/src/tmp/gromacs-buildroot/usr/bin/g_genrestr + mv /usr/src/tmp/gromacs-buildroot/usr/bin/genrestr_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_genrestr_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/gmxcheck /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxcheck + mv /usr/src/tmp/gromacs-buildroot/usr/bin/gmxcheck_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxcheck_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/gmxdump /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxdump + mv /usr/src/tmp/gromacs-buildroot/usr/bin/gmxdump_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxdump_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/grompp /usr/src/tmp/gromacs-buildroot/usr/bin/g_grompp + mv /usr/src/tmp/gromacs-buildroot/usr/bin/grompp_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_grompp_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/highway /usr/src/tmp/gromacs-buildroot/usr/bin/g_highway + mv /usr/src/tmp/gromacs-buildroot/usr/bin/highway_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_highway_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/luck /usr/src/tmp/gromacs-buildroot/usr/bin/g_luck + mv /usr/src/tmp/gromacs-buildroot/usr/bin/luck_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_luck_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/make_edi /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_edi + mv /usr/src/tmp/gromacs-buildroot/usr/bin/make_edi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_edi_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/make_ndx /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_ndx + mv /usr/src/tmp/gromacs-buildroot/usr/bin/make_ndx_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_ndx_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/mdrun /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun + mv /usr/src/tmp/gromacs-buildroot/usr/bin/mdrun_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/mk_angndx /usr/src/tmp/gromacs-buildroot/usr/bin/g_mk_angndx + mv /usr/src/tmp/gromacs-buildroot/usr/bin/mk_angndx_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mk_angndx_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/ngmx /usr/src/tmp/gromacs-buildroot/usr/bin/g_ngmx + mv /usr/src/tmp/gromacs-buildroot/usr/bin/ngmx_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_ngmx_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/pdb2gmx /usr/src/tmp/gromacs-buildroot/usr/bin/g_pdb2gmx + mv /usr/src/tmp/gromacs-buildroot/usr/bin/pdb2gmx_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_pdb2gmx_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/protonate /usr/src/tmp/gromacs-buildroot/usr/bin/g_protonate + mv /usr/src/tmp/gromacs-buildroot/usr/bin/protonate_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_protonate_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/sigeps /usr/src/tmp/gromacs-buildroot/usr/bin/g_sigeps + mv /usr/src/tmp/gromacs-buildroot/usr/bin/sigeps_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sigeps_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/tpbconv /usr/src/tmp/gromacs-buildroot/usr/bin/g_tpbconv + mv /usr/src/tmp/gromacs-buildroot/usr/bin/tpbconv_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_tpbconv_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/trjcat /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjcat + mv /usr/src/tmp/gromacs-buildroot/usr/bin/trjcat_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjcat_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/trjconv /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjconv + mv /usr/src/tmp/gromacs-buildroot/usr/bin/trjconv_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjconv_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/trjorder /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjorder + mv /usr/src/tmp/gromacs-buildroot/usr/bin/trjorder_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjorder_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/wheel /usr/src/tmp/gromacs-buildroot/usr/bin/g_wheel + mv /usr/src/tmp/gromacs-buildroot/usr/bin/wheel_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_wheel_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/x2top /usr/src/tmp/gromacs-buildroot/usr/bin/g_x2top + mv /usr/src/tmp/gromacs-buildroot/usr/bin/x2top_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_x2top_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/xpm2ps /usr/src/tmp/gromacs-buildroot/usr/bin/g_xpm2ps + mv /usr/src/tmp/gromacs-buildroot/usr/bin/xpm2ps_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_xpm2ps_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway luck make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/xrama /usr/src/tmp/gromacs-buildroot/usr/bin/g_xrama + mv /usr/src/tmp/gromacs-buildroot/usr/bin/xrama_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_xrama_d + for bin in demux.pl xplor2gmx.pl + mv /usr/src/tmp/gromacs-buildroot/usr/bin/demux.pl /usr/src/tmp/gromacs-buildroot/usr/bin/g_demux.pl + for bin in demux.pl xplor2gmx.pl + mv /usr/src/tmp/gromacs-buildroot/usr/bin/xplor2gmx.pl /usr/src/tmp/gromacs-buildroot/usr/bin/g_xplor2gmx.pl + for mpibin in mdrun + mv /usr/src/tmp/gromacs-buildroot/usr/bin/mdrun_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_mpi + mv /usr/src/tmp/gromacs-buildroot/usr/bin/mdrun_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_mpi_d + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/anadock.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_anadock.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/anadock_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_anadock_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/do_dssp.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_do_dssp.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/do_dssp_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_do_dssp_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/editconf.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_editconf.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/editconf_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_editconf_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/eneconv.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_eneconv.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/eneconv_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_eneconv_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genbox.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_genbox.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genbox_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_genbox_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genconf.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_genconf.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genconf_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_genconf_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genion.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_genion.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genion_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_genion_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genrestr.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_genrestr.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/genrestr_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_genrestr_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxcheck.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_gmxcheck.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxcheck_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_gmxcheck_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxdump.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_gmxdump.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/gmxdump_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_gmxdump_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/grompp.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_grompp.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/grompp_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_grompp_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/highway.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_highway.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/highway_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_highway_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_edi.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_make_edi.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_edi_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_make_edi_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_ndx.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_make_ndx.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/make_ndx_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_make_ndx_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mdrun.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mdrun.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mdrun_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mdrun_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mk_angndx.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mk_angndx.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/mk_angndx_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_mk_angndx_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/ngmx.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_ngmx.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/ngmx_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_ngmx_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/pdb2gmx.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_pdb2gmx.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/pdb2gmx_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_pdb2gmx_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/protonate.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_protonate.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/protonate_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_protonate_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/sigeps.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sigeps.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/sigeps_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_sigeps_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/tpbconv.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_tpbconv.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/tpbconv_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_tpbconv_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjcat.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_trjcat.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjcat_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_trjcat_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjconv.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_trjconv.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjconv_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_trjconv_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjorder.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_trjorder.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/trjorder_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_trjorder_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/wheel.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_wheel.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/wheel_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_wheel_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/x2top.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_x2top.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/x2top_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_x2top_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xpm2ps.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_xpm2ps.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xpm2ps_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_xpm2ps_d.1 + for bin in anadock do_dssp editconf eneconv genbox genconf genion genrestr gmxcheck gmxdump grompp highway make_edi make_ndx mdrun mk_angndx ngmx pdb2gmx protonate sigeps tpbconv trjcat trjconv trjorder wheel x2top xpm2ps xrama + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xrama.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_xrama.1 + mv /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/xrama_d.1 /usr/src/tmp/gromacs-buildroot/usr/share/man/man1/g_xrama_d.1 + chmod a-x /usr/src/tmp/gromacs-buildroot/usr/bin/completion.bash /usr/src/tmp/gromacs-buildroot/usr/bin/completion.csh /usr/src/tmp/gromacs-buildroot/usr/bin/completion.zsh + mkdir -p /usr/src/tmp/gromacs-buildroot/usr/share/zsh/site-functions + mv /usr/src/tmp/gromacs-buildroot/usr/bin/completion.zsh /usr/src/tmp/gromacs-buildroot/usr/share/zsh/site-functions/gromacs + mkdir -p /usr/src/tmp/gromacs-buildroot/etc/bash_completion.d + mv /usr/src/tmp/gromacs-buildroot/usr/bin/completion.bash /usr/src/tmp/gromacs-buildroot/etc/bash_completion.d/gromacs + mv /usr/src/tmp/gromacs-buildroot/usr/bin/completion.csh . + rm -rf /usr/src/tmp/gromacs-buildroot//usr/lib64/libgmx.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libgmx_d.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libgmx_mpi.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libgmx_mpi_d.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libgmxana.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libgmxana_d.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libgmxana_mpi.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libgmxana_mpi_d.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libmd.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libmd_d.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libmd_mpi.la /usr/src/tmp/gromacs-buildroot//usr/lib64/libmd_mpi_d.la + mv mpi-single/src/mdlib/.libs/libmd_mpi.so mpi-single/src/mdlib/.libs/libmd_mpi.so.5 mpi-single/src/mdlib/.libs/libmd_mpi.so.5.0.0 mpi-single/src/mdlib/.libs/libmd_mpi.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/ + mv mpi-double/src/mdlib/.libs/libmd_mpi_d.so mpi-double/src/mdlib/.libs/libmd_mpi_d.so.5 mpi-double/src/mdlib/.libs/libmd_mpi_d.so.5.0.0 mpi-double/src/mdlib/.libs/libmd_mpi_d.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/ + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/GMXRC `/usr/src/tmp/gromacs-buildroot/usr/bin/GMXRC' probably isn't an ELF file. elf_open: Exec format error + : + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/GMXRC.bash `/usr/src/tmp/gromacs-buildroot/usr/bin/GMXRC.bash' probably isn't an ELF file. elf_open: Exec format error + : + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/GMXRC.csh `/usr/src/tmp/gromacs-buildroot/usr/bin/GMXRC.csh' probably isn't an ELF file. elf_open: Exec format error + : + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/GMXRC.zsh `/usr/src/tmp/gromacs-buildroot/usr/bin/GMXRC.zsh' probably isn't an ELF file. elf_open: Exec format error + : + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/anadock_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/anadock_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/anadock_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/anadock_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/anadock_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/anadock_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/do_dssp_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/do_dssp_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/do_dssp_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/do_dssp_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/do_dssp_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/do_dssp_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/editconf_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/editconf_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/editconf_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/editconf_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/editconf_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/editconf_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/eneconv_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/eneconv_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/eneconv_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/eneconv_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/eneconv_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/eneconv_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anadock /usr/src/tmp/gromacs-buildroot/usr/bin/g_anadock: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anadock: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anadock_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_anadock_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anadock_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_anaeig_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_angle_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bond_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_bundle_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_chi_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_cluster_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_clustsize_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_confrms_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_covar_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_current /usr/src/tmp/gromacs-buildroot/usr/bin/g_current: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_current: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_current_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_current_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_current_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_current_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_current_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_current_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_current_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_current_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_current_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_demux.pl `/usr/src/tmp/gromacs-buildroot/usr/bin/g_demux.pl' probably isn't an ELF file. elf_open: Exec format error + : + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_density /usr/src/tmp/gromacs-buildroot/usr/bin/g_density: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_density: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_density_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_density_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_density_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_density_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_density_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_density_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_density_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_density_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_density_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_densmap_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dielectric_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dih_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dipoles_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_disre_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dist_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_do_dssp /usr/src/tmp/gromacs-buildroot/usr/bin/g_do_dssp: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_do_dssp: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_do_dssp_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_do_dssp_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_do_dssp_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_dyndom_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_editconf /usr/src/tmp/gromacs-buildroot/usr/bin/g_editconf: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_editconf: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_editconf_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_editconf_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_editconf_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_eneconv /usr/src/tmp/gromacs-buildroot/usr/bin/g_eneconv: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_eneconv: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_eneconv_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_eneconv_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_eneconv_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_enemat_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_energy_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_filter_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genbox /usr/src/tmp/gromacs-buildroot/usr/bin/g_genbox: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genbox: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genbox_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_genbox_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genbox_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genconf /usr/src/tmp/gromacs-buildroot/usr/bin/g_genconf: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genconf: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genconf_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_genconf_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genconf_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genion /usr/src/tmp/gromacs-buildroot/usr/bin/g_genion: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genion: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genion_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_genion_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genion_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genrestr /usr/src/tmp/gromacs-buildroot/usr/bin/g_genrestr: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genrestr: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genrestr_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_genrestr_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_genrestr_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxcheck /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxcheck: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxcheck: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxcheck_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxcheck_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxcheck_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxdump /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxdump: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxdump: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxdump_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxdump_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_gmxdump_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_grompp /usr/src/tmp/gromacs-buildroot/usr/bin/g_grompp: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_grompp: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_grompp_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_grompp_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_grompp_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_gyrate_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_h2order_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helix_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_helixorient_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_highway /usr/src/tmp/gromacs-buildroot/usr/bin/g_highway: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_highway: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_highway_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_highway_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_highway_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_lie_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_luck /usr/src/tmp/gromacs-buildroot/usr/bin/g_luck: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_luck: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_luck_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_luck_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_luck_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_edi /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_edi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_edi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_edi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_edi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_edi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_ndx /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_ndx: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_ndx: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_ndx_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_ndx_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_make_ndx_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdmat_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mdrun_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mindist_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mk_angndx /usr/src/tmp/gromacs-buildroot/usr/bin/g_mk_angndx: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mk_angndx: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mk_angndx_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_mk_angndx_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_mk_angndx_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_morph_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_msd_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_ngmx /usr/src/tmp/gromacs-buildroot/usr/bin/g_ngmx: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_ngmx: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_ngmx_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_ngmx_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_ngmx_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmeig_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmens_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_nmtraj_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_order /usr/src/tmp/gromacs-buildroot/usr/bin/g_order: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_order: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_order_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_order_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_order_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_order_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_order_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_order_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_order_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_order_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_order_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_pdb2gmx /usr/src/tmp/gromacs-buildroot/usr/bin/g_pdb2gmx: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_pdb2gmx: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_pdb2gmx_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_pdb2gmx_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_pdb2gmx_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_polystat_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_potential_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_principal_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_protonate /usr/src/tmp/gromacs-buildroot/usr/bin/g_protonate: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_protonate: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_protonate_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_protonate_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_protonate_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rama_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rdf_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rms_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsdist_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rmsf_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_rotacf_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_saltbr_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sas_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sdf_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sgangle_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sham_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sigeps /usr/src/tmp/gromacs-buildroot/usr/bin/g_sigeps: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sigeps: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sigeps_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sigeps_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sigeps_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_sorient_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spatial_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_spol_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tcaf_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tpbconv /usr/src/tmp/gromacs-buildroot/usr/bin/g_tpbconv: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_tpbconv: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_tpbconv_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_tpbconv_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_tpbconv_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_traj_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjcat /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjcat: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjcat: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjcat_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjcat_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjcat_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjconv /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjconv: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjconv: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjconv_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjconv_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjconv_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjorder /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjorder: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjorder: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjorder_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjorder_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_trjorder_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_vanhove_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_velacc_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wham_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wheel /usr/src/tmp/gromacs-buildroot/usr/bin/g_wheel: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wheel: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wheel_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_wheel_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_wheel_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_x2top /usr/src/tmp/gromacs-buildroot/usr/bin/g_x2top: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_x2top: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_x2top_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_x2top_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_x2top_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_xplor2gmx.pl `/usr/src/tmp/gromacs-buildroot/usr/bin/g_xplor2gmx.pl' probably isn't an ELF file. elf_open: Exec format error + : + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_xpm2ps /usr/src/tmp/gromacs-buildroot/usr/bin/g_xpm2ps: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_xpm2ps: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_xpm2ps_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_xpm2ps_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_xpm2ps_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_xrama /usr/src/tmp/gromacs-buildroot/usr/bin/g_xrama: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_xrama: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/g_xrama_d /usr/src/tmp/gromacs-buildroot/usr/bin/g_xrama_d: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/bin/g_xrama_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genbox_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/genbox_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genbox_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genbox_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/genbox_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genbox_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genconf_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/genconf_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genconf_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genconf_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/genconf_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genconf_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genion_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/genion_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genion_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genion_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/genion_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genion_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genrestr_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/genrestr_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genrestr_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genrestr_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/genrestr_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/genrestr_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/gmxcheck_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/gmxcheck_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/gmxcheck_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/gmxcheck_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/gmxcheck_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/gmxcheck_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/gmxdump_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/gmxdump_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/gmxdump_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/gmxdump_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/gmxdump_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/gmxdump_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/grompp_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/grompp_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/grompp_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/grompp_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/grompp_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/grompp_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/highway_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/highway_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/highway_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/highway_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/highway_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/highway_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/luck_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/luck_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/luck_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/luck_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/luck_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/luck_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/make_edi_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/make_edi_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/make_edi_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/make_edi_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/make_edi_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/make_edi_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/make_ndx_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/make_ndx_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/make_ndx_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/make_ndx_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/make_ndx_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/make_ndx_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/mk_angndx_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/mk_angndx_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/mk_angndx_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/mk_angndx_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/mk_angndx_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/mk_angndx_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/ngmx_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/ngmx_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/ngmx_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/ngmx_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/ngmx_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/ngmx_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/pdb2gmx_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/pdb2gmx_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/pdb2gmx_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/pdb2gmx_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/pdb2gmx_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/pdb2gmx_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/protonate_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/protonate_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/protonate_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/protonate_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/protonate_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/protonate_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/sigeps_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/sigeps_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/sigeps_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/sigeps_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/sigeps_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/sigeps_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/tpbconv_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/tpbconv_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/tpbconv_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/tpbconv_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/tpbconv_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/tpbconv_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjcat_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/trjcat_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjcat_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjcat_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/trjcat_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjcat_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjconv_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/trjconv_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjconv_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjconv_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/trjconv_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjconv_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjorder_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/trjorder_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjorder_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjorder_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/trjorder_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/trjorder_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/wheel_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/wheel_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/wheel_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/wheel_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/wheel_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/wheel_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/x2top_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/x2top_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/x2top_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/x2top_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/x2top_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/x2top_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/xpm2ps_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/xpm2ps_mpi: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/xpm2ps_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/xpm2ps_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/xpm2ps_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/xpm2ps_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/xrama_mpi /usr/src/tmp/gromacs-buildroot/usr/bin/xrama_mpi: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/xrama_mpi: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/xrama_mpi_d /usr/src/tmp/gromacs-buildroot/usr/bin/xrama_mpi_d: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/bin/xrama_mpi_d: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx.so.5: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_d.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_d.so.5: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_d.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_d.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_d.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_d.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi.so.5: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi_d.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi_d.so.5: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi_d.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi_d.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi_d.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi_d.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5: RPATH=path:/usr/lib64/openmpi/lib/:path:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd.so.5: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_d.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_d.so.5: RPATH=path:/usr/lib64/openmpi/lib/ /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_d.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_d.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_d.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_d.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5.0.0T: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5.0.0T: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5 /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5.0.0 /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5.0.0: RPATH=/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5.0.0: new RPATH: /usr/lib64/openmpi/lib + for i in '/usr/src/tmp/gromacs-buildroot/usr/bin/*' '/usr/src/tmp/gromacs-buildroot/usr/lib64/*.so.*' + chrpath -r /usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5.0.0T /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5.0.0T: RPATH=path:/usr/lib64/openmpi/lib/:/usr/lib64/openmpi/lib /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5.0.0T: new RPATH: /usr/lib64/openmpi/lib + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/gromacs-buildroot (auto) mode of './usr/lib64/libmd_mpi_d.so.5.0.0T' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libmd_mpi_d.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libmd_mpi.so.5.0.0T' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libmd_mpi.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgmxana_mpi_d.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgmx_mpi_d.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgmxana_mpi.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgmx_mpi.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgmxana_d.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libmd_d.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgmx_d.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgmxana.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libmd.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgmx.so.5.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/gromacs-buildroot (binconfig,pkgconfig,libtool,desktop) Compressing files in /usr/src/tmp/gromacs-buildroot (auto) Adjusting library links in /usr/src/tmp/gromacs-buildroot ./usr/lib64: libgmx.so.5 -> libgmx.so.5.0.0 libmd.so.5 -> libmd.so.5.0.0 libgmxana.so.5 -> libgmxana.so.5.0.0 libgmx_d.so.5 -> libgmx_d.so.5.0.0 libmd_d.so.5 -> libmd_d.so.5.0.0 libgmxana_d.so.5 -> libgmxana_d.so.5.0.0 libgmx_mpi.so.5 -> libgmx_mpi.so.5.0.0 libgmxana_mpi.so.5 -> libgmxana_mpi.so.5.0.0 libgmx_mpi_d.so.5 -> libgmx_mpi_d.so.5.0.0 libgmxana_mpi_d.so.5 -> libgmxana_mpi_d.so.5.0.0 libmd_mpi.so.5 -> libmd_mpi.so.5.0.0T (changed) libmd_mpi_d.so.5 -> libmd_mpi_d.so.5.0.0T (changed) Verifying ELF objects in /usr/src/tmp/gromacs-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) verify-elf: WARNING: ./usr/bin/g_mdrun_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mdrun_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_xrama_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_xrama: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_xpm2ps_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_xpm2ps: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_x2top_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_x2top: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_wheel_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_wheel: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_trjorder_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_trjorder: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_trjconv_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_trjconv: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_trjcat_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_trjcat: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_tpbconv_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_tpbconv: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sigeps_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sigeps: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_protonate_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_protonate: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_pdb2gmx_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_pdb2gmx: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_ngmx_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_ngmx: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mk_angndx_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mk_angndx: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mdrun_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mdrun: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_make_ndx_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_make_ndx: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_make_edi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_make_edi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_luck_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_luck: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_highway_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_highway: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_grompp_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_grompp: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_gmxdump_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_gmxdump: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_gmxcheck_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_gmxcheck: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_genrestr_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_genrestr: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_genion_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_genion: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_genconf_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_genconf: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_genbox_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_genbox: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_eneconv_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_eneconv: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_editconf_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_editconf: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_do_dssp_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_do_dssp: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_anadock_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_anadock: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/highway_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/xrama_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/ngmx_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/sigeps_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_kinetics_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_wham_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mdmat_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_clustsize_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_velacc_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_vanhove_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_traj_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_tcaf_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_spatial_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sdf_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_spol_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sorient_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sham_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sgangle_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sas_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_saltbr_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rotacf_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rmsf_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rmsdist_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rms_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rdf_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rama_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_potential_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_polystat_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_order_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmens_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmeig_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_morph_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_msd_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mindist_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_helix_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_hbond_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_h2order_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_gyrate_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_filter_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_lie_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_energy_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_enemat_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dyndom_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dist_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_disre_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dipoles_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_principal_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_helixorient_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dielectric_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dih_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_densmap_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_density_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_current_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_covar_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_confrms_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_cluster_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_chi_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_bundle_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_bond_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_angle_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_anaeig_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_analyze_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/make_edi_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/anadock_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/genion_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/xpm2ps_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/wheel_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/trjorder_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/trjconv_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/trjcat_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/mk_angndx_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/make_ndx_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmtraj_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/genrestr_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/genconf_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/genbox_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/eneconv_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/editconf_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/do_dssp_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/x2top_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/gmxcheck_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/gmxdump_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/luck_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/protonate_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/pdb2gmx_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/tpbconv_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/grompp_mpi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/highway_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/xrama_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/ngmx_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/sigeps_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_kinetics_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_wham_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mdmat_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_clustsize_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_velacc_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_vanhove_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_traj_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_tcaf_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_spatial_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sdf_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_spol_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sorient_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sham_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sgangle_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sas_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_saltbr_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rotacf_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rmsf_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rmsdist_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rms_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rdf_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rama_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_potential_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_polystat_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_order_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmens_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmeig_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_morph_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_msd_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mindist_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_helix_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_hbond_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_h2order_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_gyrate_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_filter_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_lie_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_energy_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_enemat_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dyndom_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dist_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_disre_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dipoles_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_principal_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_helixorient_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dielectric_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dih_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_densmap_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_density_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_current_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_covar_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_confrms_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_cluster_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_chi_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_bundle_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_bond_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_angle_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_anaeig_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_analyze_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/make_edi_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/anadock_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/genion_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/xpm2ps_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/wheel_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/trjorder_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/trjconv_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/trjcat_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/mk_angndx_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/make_ndx_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmtraj_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/genrestr_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/genconf_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/genbox_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/eneconv_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/editconf_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/do_dssp_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/x2top_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/gmxcheck_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/gmxdump_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/luck_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/protonate_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/pdb2gmx_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/tpbconv_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/grompp_mpi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_kinetics_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_wham_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mdmat_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_clustsize_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_velacc_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_vanhove_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_traj_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_tcaf_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_spatial_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sdf_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_spol_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sorient_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sham_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sgangle_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sas_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_saltbr_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rotacf_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rmsf_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rmsdist_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rms_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rdf_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rama_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_potential_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_polystat_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_order_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmens_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmeig_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_morph_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_msd_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mindist_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_helix_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_hbond_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_h2order_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_gyrate_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_filter_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_lie_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_energy_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_enemat_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dyndom_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dist_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_disre_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dipoles_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_principal_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_helixorient_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dielectric_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dih_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_densmap_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_density_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_current_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_covar_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_confrms_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_cluster_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_chi_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_bundle_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_bond_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_angle_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_anaeig_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_analyze_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmtraj_d: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_kinetics: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_wham: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mdmat: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_clustsize: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_velacc: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_vanhove: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_traj: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_tcaf: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_spatial: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sdf: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_spol: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sorient: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sham: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sgangle: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_sas: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_saltbr: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rotacf: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rmsf: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rmsdist: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rms: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rdf: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_rama: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_potential: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_polystat: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_order: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmens: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmeig: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_morph: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_msd: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_mindist: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_helix: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_hbond: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_h2order: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_gyrate: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_filter: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_lie: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_energy: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_enemat: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dyndom: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dist: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_disre: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dipoles: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_principal: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_helixorient: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dielectric: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_dih: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_densmap: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_density: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_current: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_covar: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_confrms: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_cluster: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_chi: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_bundle: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_bond: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_angle: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_anaeig: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_analyze: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/bin/g_nmtraj: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libmd_mpi_d.so.5.0.0T: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libmd_mpi_d.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libmd_mpi.so.5.0.0T: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libmd_mpi.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libgmxana_mpi_d.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libgmx_mpi_d.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libgmxana_mpi.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libgmx_mpi.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libgmxana_d.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libmd_d.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libgmx_d.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libgmxana.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libmd.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib verify-elf: WARNING: ./usr/lib64/libgmx.so.5.0.0: RPATH entry found: /usr/lib64/openmpi/lib Hardlinking identical .pyc and .pyo files Processing files: gromacs-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.QbIkqe find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.9ZM5yc find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_d: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_mpi: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_analyze_mpi_d: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_d: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_mpi: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_hbond_mpi_d: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_d: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_mpi: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/bin/g_kinetics_mpi_d: overlinked libraries: /usr/lib64/libopenblas.so.0 /usr/src/tmp/gromacs-buildroot/usr/bin/g_demux.pl syntax OK /usr/src/tmp/gromacs-buildroot/usr/bin/g_xplor2gmx.pl syntax OK Requires: gromacs-common = 4.0.7-alt8, /lib64/ld-linux-x86-64.so.2, /usr/bin/perl, libX11.so.6()(64bit) >= set:oiUgZmS1kvNxeWShD68IxxrZhWBJAmK824Jj27NZBiKhya7QJH2a20VekdqAOTaWymJYl3wBk2x1BdP2D3AgbBsEp3LisNUqVJRjZb3QbeyZoGS9M0ZwMaWyM9oEAYyr5ACLNAIN6, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libc.so.6(GLIBC_2.7)(64bit), libgmx.so.5()(64bit) >= set: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, libgmx_d.so.5()(64bit) >= set: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, libgmx_mpi.so.5()(64bit) >= set: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, libgmx_mpi_d.so.5()(64bit) >= set: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, libgsl.so.0()(64bit) >= set:qmkdQnOro2KmlIXqZDc4OU3MRrrijCppBDL3ZvW6BZbfFFC4rJx1, libm.so.6(GLIBC_2.2.5)(64bit), libmd.so.5()(64bit) >= set:mfgTAjqcF4B6GDIaXV8o5OZDA6tW5d5KpN5NRxMZqQ3EnzeV1Zs7bwD4WCV1g45t8kapnxqlnHPO8ZmaaCKADZrIVadAsws76SEMjrxCtVDmDZcHsyR8QCLXkF6LYDHONNZaIG9JzcQZtqygkPe5VycD3HwVASAL45rg6oyknzMmbMedpgYa8y6SeDgcnwZmcLgjAsbjuzyF9Zys4B53j40QPSkHC55v4WWNcWSrtk3BA0JMOLGnN, libmd_d.so.5()(64bit) >= set:mfgTAjqcF4B6GDIaXV8o5OZDA6tW5d5KpN5NRxMZqQ3EnzeV1Zs7bwD4WCV1g45t8kapnxqlnHPO8ZmaaCKADZrIVadAsws76SEMjrxCtVDmDZcHsyR8QCLXkF6LYDHONNZaIG9JzcQZtqygkPe5VycD3HwVASAL45rg6oyknzMmbMedpgYa8y6SeDgcnwZmcLgjAsbjuzyF9Zys4B53j40QPSkHC55v4WWNcWSrtk3BA0JMOLGnN, libmd_mpi.so.5()(64bit) >= set:mh0sFwfmV9xHPcy2WG2qSrrqPeqT9aqHkGGT5QPahYNXZFQw8z3, libmd_mpi_d.so.5()(64bit) >= set:mh0sFwfmV9xHPcy2WG2qSrrqPeqT9aqHkGGT5QPahYNXZFQw8z3, libopenblas.so.0()(64bit), rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.6gMEZV Creating gromacs-debuginfo package Processing files: gromacs-libs-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.jA0IBV find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx.so.5: 1348 symbols, 21 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_d.so.5: 1348 symbols, 21 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5: 341 symbols, 19 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5: 341 symbols, 19 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd.so.5: 322 symbols, 19 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_d.so.5: 322 symbols, 19 bpp Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.SEtm2X find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5.0.0: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5.0.0: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana.so.5: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_d.so.5: overlinked libraries: /usr/lib64/libopenblas.so.0 Provides: libgmx.so.5()(64bit) = set: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, libgmx_d.so.5()(64bit) = set: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, libgmxana.so.5()(64bit) = set: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, libgmxana_d.so.5()(64bit) = set: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, libmd.so.5()(64bit) = set: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, libmd_d.so.5()(64bit) = set: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 Requires: gromacs-common = 4.0.7-alt8, libc.so.6(GLIBC_2.11)(64bit), libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libc.so.6(GLIBC_2.7)(64bit), libfftw3.so.3()(64bit) >= set:lhRviZyOH3Z6fGJT03sbjTGvskrJcZc8YJd6Z40NTd1, libfftw3f.so.3()(64bit) >= set:lhFZpi5UEx4HyjpRfT63zoy92T3kgVbCLRWJcO8HL3, libgsl.so.0()(64bit) >= set:qmkdQnOro2KmlIXqZDc4OU3MRrrijCppBDL3ZvW6BZbfFFC4rJx1, liblapack.so.4()(64bit) >= set:omax1kCj8, libm.so.6(GLIBC_2.2.5)(64bit), libopenblas.so.0()(64bit), rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Rkn5Kg Creating gromacs-libs-debuginfo package Processing files: gromacs-mpi-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.g4r3mC find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.NJmp00 find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Requires: gromacs-common = 4.0.7-alt8, /lib64/ld-linux-x86-64.so.2, /usr/lib64/openmpi/lib/libmpi.so.1, libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libc.so.6(GLIBC_2.7)(64bit), libgmx_mpi.so.5()(64bit) >= set:ohsOuTxkT4szlByhH3u8hMrApZdcEQbY868b0rYTQgUD0CvRIj4cHGGLm8BkTP1woJuRhrP9aukBHR8OngUbBLqumY4FxnK7pA8OsqZI5wyRNu986lgUnKnadfOpHWgnNHFWb7LqrPdmivKHv8j7JzKsZ2cG5aHmTGxZclJVfpcMvSxVFEtoJKNC0QjdahuN07q5ZtUWzVNZcaY0oY0UWqGrPa41, libgmx_mpi_d.so.5()(64bit) >= set:ohsOuTxkT4szlByhH3u8hMrApZdcEQbY868b0rYTQgUD0CvRIj4cHGGLm8BkTP1woJuRhrP9aukBbiCavFYlPPyD8dYOZ8ci4peJvK0kIeSb1NE22ZyTbBC7VIltEHURkZ5euRSCrIAZstZ3AFzShnKuxhJgpRWmdIDHqPvOowZIecf5J3HRdS4wuGh9Ob6UgHet6OMDZoVNZcaY0oY0UWqGrPa41, libm.so.6(GLIBC_2.2.5)(64bit), libmd_mpi.so.5()(64bit) >= set:mfgTAjqcF4B6GDIaXV8o5OZDA6tW5d5KpN5NRxMZqQ3EnzeVZkdwluu04hh72BiSlEmRRq9hlkct9fZ7pPlq8V0VeU8nrxCtVDmDZcHsyR8QCLXkF6LYheDZaIG9JzcQsA1RIjhK8PVMaoeFdVbhN6A1C8RR8IR2Ijj64L2wRd94P5ELNY2dhOJcVBelbs4B53jMPCkHC55v4WWNcWSrtk3BA0JMOLGnN, libmd_mpi_d.so.5()(64bit) >= set:mfgTAjqcF4B6GDIaXV8o5OZDA6tW5d5KpN5NRxMZqQ3EnzeVZkdwluu04hh72BiSlEmRRq9hlkct9fZ7pPlq8V0VeU8nrxCtVDmDZcHsyR8QCLXkF6LYheDZaIG9JzcQsA1RIjhK8PVMaoeFdVbhN6A1C8RR8IR2Ijj64L2wRd94P5ELNY2dhOJcVBelbs4B53jMPCkHC55v4WWNcWSrtk3BA0JMOLGnN, rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.O2Lkav Creating gromacs-mpi-debuginfo package Processing files: gromacs-common-4.0.7-alt8 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.87159 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd gromacs-4.0.7 + DOCDIR=/usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-common-4.0.7 + export DOCDIR + rm -rf /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-common-4.0.7 + /bin/mkdir -p /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-common-4.0.7 + cp -prL AUTHORS COPYING README /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-common-4.0.7 + chmod -R go-w /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-common-4.0.7 + chmod -R a+rX /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-common-4.0.7 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.5vuBM2 find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.q9upeD find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Processing files: gromacs-devel-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.XeB9bj find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.s9pId2 find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) /usr/src/tmp/gromacs-buildroot/usr/include/gromacs/statusio.h:45:21: fatal error: sheader.h: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/gromacs-buildroot/usr/include/gromacs/statusio.h: cpp failed, trying c++ mode /usr/src/tmp/gromacs-buildroot/usr/include/gromacs/statusio.h:45:21: fatal error: sheader.h: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/include/gromacs/statusio.h: cpp failed Requires: gromacs-common = 4.0.7-alt8, gromacs-libs = 4.0.7-alt8, /usr/lib64/libgmx.so.5.0.0, /usr/lib64/libgmx_d.so.5.0.0, /usr/lib64/libgmxana.so.5.0.0, /usr/lib64/libgmxana_d.so.5.0.0, /usr/lib64/libmd.so.5.0.0, /usr/lib64/libmd_d.so.5.0.0 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.hCPud9 Processing files: gromacs-mpi-devel-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.UsU17i find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.djU1Uv find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Requires: gromacs-mpi-libs = 4.0.7-alt8, gromacs-devel = 4.0.7-alt8, /usr/lib64/libgmx_mpi.so.5.0.0, /usr/lib64/libgmx_mpi_d.so.5.0.0, /usr/lib64/libgmxana_mpi.so.5.0.0, /usr/lib64/libgmxana_mpi_d.so.5.0.0, /usr/lib64/libmd_mpi.so.5.0.0, /usr/lib64/libmd_mpi_d.so.5.0.0 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.4CMaDL Processing files: gromacs-mpi-libs-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.nfd7o4 find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi.so.5: 1348 symbols, 21 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmx_mpi_d.so.5: 1348 symbols, 21 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5: 341 symbols, 19 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5: 341 symbols, 19 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi.so.5: 328 symbols, 19 bpp lib.prov: /usr/src/tmp/gromacs-buildroot/usr/lib64/libmd_mpi_d.so.5: 328 symbols, 19 bpp Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.wgXr2p find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5.0.0: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5.0.0: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi.so.5: overlinked libraries: /usr/lib64/libopenblas.so.0 lib.req: WARNING: /usr/src/tmp/gromacs-buildroot/usr/lib64/libgmxana_mpi_d.so.5: overlinked libraries: /usr/lib64/libopenblas.so.0 Provides: libgmx_mpi.so.5()(64bit) = set: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, libgmx_mpi_d.so.5()(64bit) = set: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, libgmxana_mpi.so.5()(64bit) = set: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, libgmxana_mpi_d.so.5()(64bit) = set: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, libmd_mpi.so.5()(64bit) = set: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, libmd_mpi_d.so.5()(64bit) = set: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 Requires: gromacs-common = 4.0.7-alt8, /usr/lib64/openmpi/lib/libmpi.so.1, libc.so.6(GLIBC_2.11)(64bit), libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libc.so.6(GLIBC_2.7)(64bit), libfftw3.so.3()(64bit) >= set:lhRviZyOH3Z6fGJT03sbjTGvskrJcZc8YJd6Z40NTd1, libfftw3f.so.3()(64bit) >= set:lhFZpi5UEx4HyjpRfT63zoy92T3kgVbCLRWJcO8HL3, libgsl.so.0()(64bit) >= set:qmkdQnOro2KmlIXqZDc4OU3MRrrijCppBDL3ZvW6BZbfFFC4rJx1, liblapack.so.4()(64bit) >= set:omax1kCj8, libm.so.6(GLIBC_2.2.5)(64bit), libopenblas.so.0()(64bit), libpthread.so.0(GLIBC_2.2.5)(64bit), rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.9A3r56 Creating gromacs-mpi-libs-debuginfo package Processing files: gromacs-shell-extensions-4.0.7-alt8 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.88039 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd gromacs-4.0.7 + DOCDIR=/usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-shell-extensions-4.0.7 + export DOCDIR + rm -rf /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-shell-extensions-4.0.7 + /bin/mkdir -p /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-shell-extensions-4.0.7 + cp -prL completion.csh /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-shell-extensions-4.0.7 + chmod -R go-w /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-shell-extensions-4.0.7 + chmod -R a+rX /usr/src/tmp/gromacs-buildroot/usr/share/doc/gromacs-shell-extensions-4.0.7 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.QDjooR find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.nv2fGE find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Obsoletes: gromacs-bash, gromacs-zsh, gromacs-csh Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.sqseSu Processing files: gromacs-tutor-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.hnrZ2n find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.EPVmak find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Requires: /bin/csh Processing files: gromacs-doc-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.BMiIfj find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.8tO9hl find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Processing files: gromacs-debuginfo-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.ZFOyvr find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.SG400E find-requires: running scripts (debuginfo) Requires: gromacs = 4.0.7-alt8, /usr/lib/debug/lib64/ld-linux-x86-64.so.2.debug, debug64(libX11.so.6), debug64(libc.so.6), debug64(libgmx.so.5), debug64(libgmx_d.so.5), debug64(libgmx_mpi.so.5), debug64(libgmx_mpi_d.so.5), debug64(libgsl.so.0), debug64(libm.so.6), debug64(libmd.so.5), debug64(libmd_d.so.5), debug64(libmd_mpi.so.5), debug64(libmd_mpi_d.so.5), debug64(libopenblas.so.0) Processing files: gromacs-libs-debuginfo-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.TzamUP find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.MKV4L6 find-requires: running scripts (debuginfo) Provides: debug64(libgmx.so.5), debug64(libgmx_d.so.5), debug64(libgmxana.so.5), debug64(libgmxana_d.so.5), debug64(libmd.so.5), debug64(libmd_d.so.5) Requires: gromacs-libs = 4.0.7-alt8, debug64(libc.so.6), debug64(libfftw3.so.3), debug64(libfftw3f.so.3), debug64(libgsl.so.0), debug64(liblapack.so.4), debug64(libm.so.6), debug64(libopenblas.so.0) Processing files: gromacs-mpi-debuginfo-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.h5Tkoz find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Cq9X04 find-requires: running scripts (debuginfo) Requires: gromacs-mpi = 4.0.7-alt8, /usr/lib/debug/lib64/ld-linux-x86-64.so.2.debug, /usr/lib/debug/usr/lib64/openmpi/lib/libmpi.so.1.debug, debug64(libc.so.6), debug64(libgmx_mpi.so.5), debug64(libgmx_mpi_d.so.5), debug64(libm.so.6), debug64(libmd_mpi.so.5), debug64(libmd_mpi_d.so.5) Processing files: gromacs-mpi-libs-debuginfo-4.0.7-alt8 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.HJzNmE find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.u53dzj find-requires: running scripts (debuginfo) Provides: debug64(libgmx_mpi.so.5), debug64(libgmx_mpi_d.so.5), debug64(libgmxana_mpi.so.5), debug64(libgmxana_mpi_d.so.5), debug64(libmd_mpi.so.5), debug64(libmd_mpi_d.so.5) Requires: gromacs-mpi-libs = 4.0.7-alt8, /usr/lib/debug/usr/lib64/openmpi/lib/libmpi.so.1.debug, debug64(libc.so.6), debug64(libfftw3.so.3), debug64(libfftw3f.so.3), debug64(libgsl.so.0), debug64(liblapack.so.4), debug64(libm.so.6), debug64(libopenblas.so.0), debug64(libpthread.so.0) Adding to gromacs a strict dependency on gromacs-libs Adding to gromacs a strict dependency on gromacs-mpi-libs Adding to gromacs-mpi a strict dependency on gromacs-mpi-libs Adding to gromacs-debuginfo a strict dependency on gromacs-libs-debuginfo Adding to gromacs-debuginfo a strict dependency on gromacs-mpi-libs-debuginfo Adding to gromacs-mpi-debuginfo a strict dependency on gromacs-mpi-libs-debuginfo Removing from gromacs-debuginfo 203 sources provided by gromacs-libs-debuginfo also prunning dir /usr/src/debug/gromacs-4.0.7/include/types Removing from gromacs-mpi-debuginfo 79 sources provided by gromacs-mpi-libs-debuginfo also prunning dir /usr/src/debug/gromacs-4.0.7/include/types Removing 4 extra deps from gromacs due to dependency on gromacs-libs Removing 4 extra deps from gromacs due to dependency on gromacs-mpi-libs Removing 6 extra deps from gromacs-devel due to dependency on gromacs-libs Removing 5 extra deps from gromacs-mpi due to dependency on gromacs-mpi-libs Removing 6 extra deps from gromacs-mpi-devel due to dependency on gromacs-mpi-libs Removing 4 extra deps from gromacs-debuginfo due to dependency on gromacs-libs-debuginfo Removing 4 extra deps from gromacs-debuginfo due to dependency on gromacs-mpi-libs-debuginfo Removing 4 extra deps from gromacs-mpi-debuginfo due to dependency on gromacs-mpi-libs-debuginfo Removing 12 extra deps from gromacs due to repentancy on gromacs-libs Removing 1 extra deps from gromacs-devel due to repentancy on gromacs-libs Removing 8 extra deps from gromacs-mpi due to repentancy on gromacs-mpi-libs Removing 4 extra deps from gromacs-debuginfo due to repentancy on gromacs-libs-debuginfo Removing 3 extra deps from gromacs-mpi-debuginfo due to repentancy on gromacs-mpi-libs-debuginfo Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-libs-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-mpi-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/noarch/gromacs-common-4.0.7-alt8.noarch.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-devel-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-mpi-devel-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-mpi-libs-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-shell-extensions-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/noarch/gromacs-tutor-4.0.7-alt8.noarch.rpm Wrote: /usr/src/RPM/RPMS/noarch/gromacs-doc-4.0.7-alt8.noarch.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-debuginfo-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-libs-debuginfo-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-mpi-debuginfo-4.0.7-alt8.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/gromacs-mpi-libs-debuginfo-4.0.7-alt8.x86_64.rpm 893.17user 170.35system 16:57.32elapsed 104%CPU (0avgtext+0avgdata 97504maxresident)k 0inputs+0outputs (0major+93411856minor)pagefaults 0swaps 905.57user 174.28system 17:24.86elapsed 103%CPU (0avgtext+0avgdata 122252maxresident)k 400inputs+0outputs (0major+94009582minor)pagefaults 0swaps --- gromacs-4.0.7-alt8.x86_64.rpm.repo 2012-08-11 20:29:06.000000000 +0000 +++ gromacs-4.0.7-alt8.x86_64.rpm.hasher 2019-04-14 04:18:59.986212961 +0000 @@ -354,3 +354,2 @@ /usr/bin/xrama_mpi_d 100755 -Requires: gromacs-common = 4.0.7-alt8 Requires: /lib64/ld-linux-x86-64.so.2 @@ -358,20 +357,4 @@ Requires: libX11.so.6()(64bit) >= set:oiUgZmS1kvNxeWShD68IxxrZhWBJAmK824Jj27NZBiKhya7QJH2a20VekdqAOTaWymJYl3wBk2x1BdP2D3AgbBsEp3LisNUqVJRjZb3QbeyZoGS9M0ZwMaWyM9oEAYyr5ACLNAIN6 -Requires: rpmlib(SetVersions) -Requires: libc.so.6(GLIBC_2.2.5)(64bit) -Requires: libc.so.6(GLIBC_2.3)(64bit) -Requires: libc.so.6(GLIBC_2.3.4)(64bit) -Requires: libc.so.6(GLIBC_2.4)(64bit) -Requires: libc.so.6(GLIBC_2.7)(64bit) -Requires: libgmx.so.5()(64bit) >= set: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 -Requires: libgmx_d.so.5()(64bit) >= set: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 -Requires: libgmx_mpi.so.5()(64bit) >= 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gromacs-common-4.0.7-alt8.noarch.rpm.repo 2012-08-11 20:29:04.000000000 +0000 +++ gromacs-common-4.0.7-alt8.noarch.rpm.hasher 2019-04-14 04:19:00.078213094 +0000 @@ -162,354 +162,354 @@ /usr/share/gromacs/top/xlateat.dat 100644 -/usr/share/man/man1/anadock_mpi.1.gz 100644 -/usr/share/man/man1/anadock_mpi_d.1.gz 100644 -/usr/share/man/man1/do_dssp_mpi.1.gz 100644 -/usr/share/man/man1/do_dssp_mpi_d.1.gz 100644 -/usr/share/man/man1/editconf_mpi.1.gz 100644 -/usr/share/man/man1/editconf_mpi_d.1.gz 100644 -/usr/share/man/man1/eneconv_mpi.1.gz 100644 -/usr/share/man/man1/eneconv_mpi_d.1.gz 100644 -/usr/share/man/man1/g_anadock.1.gz 100644 -/usr/share/man/man1/g_anadock_d.1.gz 100644 -/usr/share/man/man1/g_anaeig.1.gz 100644 -/usr/share/man/man1/g_anaeig_d.1.gz 100644 -/usr/share/man/man1/g_anaeig_mpi.1.gz 100644 -/usr/share/man/man1/g_anaeig_mpi_d.1.gz 100644 -/usr/share/man/man1/g_analyze.1.gz 100644 -/usr/share/man/man1/g_analyze_d.1.gz 100644 -/usr/share/man/man1/g_analyze_mpi.1.gz 100644 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-/usr/src/debug/gromacs-4.0.7/include/types/constr.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/energy.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/enums.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/fcdata.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/filenm.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/forcerec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/graph.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/group.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/idef.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/ifunc.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/inputrec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/matrix.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/mdatom.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/nblist.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/nrnb.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/ns.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/nsgrid.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/pbc.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/qmmmrec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/shellfc.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/simple.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/state.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/symtab.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/topology.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/trx.h 100644 -/usr/src/debug/gromacs-4.0.7/include/update.h 100644 -/usr/src/debug/gromacs-4.0.7/include/vcm.h 100644 -/usr/src/debug/gromacs-4.0.7/include/vec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/viewit.h 100644 -/usr/src/debug/gromacs-4.0.7/include/vsite.h 100644 -/usr/src/debug/gromacs-4.0.7/include/wgms.h 100644 -/usr/src/debug/gromacs-4.0.7/include/writeps.h 100644 -/usr/src/debug/gromacs-4.0.7/include/xtcio.h 100644 -/usr/src/debug/gromacs-4.0.7/include/xvgr.h 100644 /usr/src/debug/gromacs-4.0.7/src 40755 @@ -595,24 +487,6 @@ /usr/src/debug/gromacs-4.0.7/src/tools 40755 -/usr/src/debug/gromacs-4.0.7/src/tools/addconf.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/addconf.h 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/anadih.c 100644 /usr/src/debug/gromacs-4.0.7/src/tools/anadock.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/autocorr.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/calcpot.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/calcpot.h 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/cmat.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/cmat.h 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/correl.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/correl.h 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/dlist.c 100644 /usr/src/debug/gromacs-4.0.7/src/tools/do_dssp.c 100644 /usr/src/debug/gromacs-4.0.7/src/tools/editconf.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/eigensolver.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/eigensolver.h 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/eigio.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/eigio.h 100644 /usr/src/debug/gromacs-4.0.7/src/tools/eneconv.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/expfit.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/fitahx.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/fitahx.h 100644 /usr/src/debug/gromacs-4.0.7/src/tools/g_anaeig.c 100644 @@ -680,76 +554,2 @@ /usr/src/debug/gromacs-4.0.7/src/tools/genrestr.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_anaeig.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_analyze.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_angle.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_bond.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_bundle.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_chi.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_cluster.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_clustsize.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_confrms.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_covar.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_current.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_density.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_densmap.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_dielectric.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_dih.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_dipoles.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_disre.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_dist.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_dyndom.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_editconf.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_eneconv.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_enemat.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_energy.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_filter.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_genbox.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_genconf.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_genion.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_genpr.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_gyrate.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_h2order.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_hbond.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_helix.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_helixorient.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_kinetics.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_lie.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_mdmat.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_mindist.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_morph.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_msd.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_nmeig.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_nmens.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_nmtraj.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_order.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_polystat.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_potential.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_principal.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_rama.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_rdf.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_rms.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_rmsdist.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_rmsf.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_rotacf.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_saltbr.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_sas.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_sdf.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_sgangle.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_sham.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_sorient.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_spatial.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_spol.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_tcaf.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_traj.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_trjcat.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_trjconv.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_trjorder.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_vanhove.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_velacc.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_wham.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_wheel.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/gmx_xpm2ps.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/hxprops.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/hxprops.h 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/levenmar.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/lsq.c 100644 /usr/src/debug/gromacs-4.0.7/src/tools/make_edi.c 100644 @@ -757,6 +557,2 @@ /usr/src/debug/gromacs-4.0.7/src/tools/mk_angndx.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/nsc.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/nsc.h 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/polynomials.c 100644 -/usr/src/debug/gromacs-4.0.7/src/tools/pp2shift.c 100644 /usr/src/debug/gromacs-4.0.7/src/tools/sigeps.c 100644 @@ -770,14 +566,4 @@ Requires: debug64(libX11.so.6) -Requires: debug64(libc.so.6) -Requires: debug64(libgmx.so.5) -Requires: debug64(libgmx_d.so.5) -Requires: debug64(libgmx_mpi.so.5) -Requires: debug64(libgmx_mpi_d.so.5) -Requires: debug64(libgsl.so.0) -Requires: debug64(libm.so.6) -Requires: debug64(libmd.so.5) -Requires: debug64(libmd_d.so.5) -Requires: debug64(libmd_mpi.so.5) -Requires: debug64(libmd_mpi_d.so.5) -Requires: debug64(libpthread.so.0) +Requires: gromacs-libs-debuginfo = 4.0.7-alt8 +Requires: gromacs-mpi-libs-debuginfo = 4.0.7-alt8 Requires: rpmlib(PayloadIsLzma) --- gromacs-libs-4.0.7-alt8.x86_64.rpm.repo 2012-08-11 20:29:06.000000000 +0000 +++ gromacs-libs-4.0.7-alt8.x86_64.rpm.hasher 2019-04-14 04:19:00.358213497 +0000 @@ -14,2 +14,3 @@ Requires: libc.so.6(GLIBC_2.11)(64bit) +Requires: libc.so.6(GLIBC_2.14)(64bit) Requires: libc.so.6(GLIBC_2.2.5)(64bit) @@ -19,5 +20,5 @@ Requires: libc.so.6(GLIBC_2.7)(64bit) -Requires: libfftw3.so.3()(64bit) >= set:njvWohu96CktcRqXhkPvHBAu6qHBD02ZmK8KoqUbFM1OiA0 +Requires: libfftw3.so.3()(64bit) >= set:lhRviZyOH3Z6fGJT03sbjTGvskrJcZc8YJd6Z40NTd1 Requires: rpmlib(SetVersions) -Requires: libfftw3f.so.3()(64bit) >= set:njd9yz66TfRRr1P91P6VQRZaA59LbaV5uJsDO2VZmyMt3k0 +Requires: libfftw3f.so.3()(64bit) >= set:lhFZpi5UEx4HyjpRfT63zoy92T3kgVbCLRWJcO8HL3 Requires: libgsl.so.0()(64bit) >= set:qmkdQnOro2KmlIXqZDc4OU3MRrrijCppBDL3ZvW6BZbfFFC4rJx1 --- gromacs-mpi-4.0.7-alt8.x86_64.rpm.repo 2012-08-11 20:29:06.000000000 +0000 +++ gromacs-mpi-4.0.7-alt8.x86_64.rpm.hasher 2019-04-14 04:19:00.507213711 +0000 @@ -2,16 +2,4 @@ /usr/bin/g_mdrun_mpi_d 100755 -Requires: gromacs-common = 4.0.7-alt8 Requires: /lib64/ld-linux-x86-64.so.2 -Requires: /usr/lib64/openmpi/lib/libmpi.so.1 -Requires: libc.so.6(GLIBC_2.2.5)(64bit) -Requires: libc.so.6(GLIBC_2.3.4)(64bit) -Requires: libc.so.6(GLIBC_2.4)(64bit) -Requires: libc.so.6(GLIBC_2.7)(64bit) -Requires: libgmx_mpi.so.5()(64bit) >= set:ohsOuTxkT4szlByhH3u8hMrApZdcEQbY868b0rYTQgUD0CvRIj4cHGGLm8BkTP1woJuRhrP9aukBHR8OngUbBLqumY4FxnK7pA8OsqZI5wyRNu986lgUnKnadfOpHWgnNHFWb7LqrPdmivKHv8j7JzKsZ2cG5aHmTGxZclJVfpcMvSxVFEtoJKNC0QjdahuN07q5ZtUWzVNZcaY0oY0UWqGrPa41 -Requires: rpmlib(SetVersions) -Requires: libgmx_mpi_d.so.5()(64bit) >= set:ohsOuTxkT4szlByhH3u8hMrApZdcEQbY868b0rYTQgUD0CvRIj4cHGGLm8BkTP1woJuRhrP9aukBbiCavFYlPPyD8dYOZ8ci4peJvK0kIeSb1NE22ZyTbBC7VIltEHURkZ5euRSCrIAZstZ3AFzShnKuxhJgpRWmdIDHqPvOowZIecf5J3HRdS4wuGh9Ob6UgHet6OMDZoVNZcaY0oY0UWqGrPa41 -Requires: libm.so.6(GLIBC_2.2.5)(64bit) -Requires: libmd_mpi.so.5()(64bit) >= set:mfgTAjqcF4B6GDIaXV8o5OZDA6tW5d5KpN5NRxMZqQ3EnzeVZkdwluu04hh72BiSlEmRRq9hlkct9fZ7pPlq8V0VeU8nrxCtVDmDZcHsyR8QCLXkF6LYheDZaIG9JzcQsA1RIjhK8PVMaoeFdVbhN6A1C8RR8IR2Ijj64L2wRd94P5ELNY2dhOJcVBelbs4B53jMPCkHC55v4WWNcWSrtk3BA0JMOLGnN -Requires: libmd_mpi_d.so.5()(64bit) >= set:mfgTAjqcF4B6GDIaXV8o5OZDA6tW5d5KpN5NRxMZqQ3EnzeVZkdwluu04hh72BiSlEmRRq9hlkct9fZ7pPlq8V0VeU8nrxCtVDmDZcHsyR8QCLXkF6LYheDZaIG9JzcQsA1RIjhK8PVMaoeFdVbhN6A1C8RR8IR2Ijj64L2wRd94P5ELNY2dhOJcVBelbs4B53jMPCkHC55v4WWNcWSrtk3BA0JMOLGnN -Requires: rtld(GNU_HASH) +Requires: gromacs-mpi-libs = 4.0.7-alt8 Requires: rpmlib(PayloadIsLzma) --- gromacs-mpi-debuginfo-4.0.7-alt8.x86_64.rpm.repo 2012-08-11 20:29:06.000000000 +0000 +++ gromacs-mpi-debuginfo-4.0.7-alt8.x86_64.rpm.hasher 2019-04-14 04:19:00.577213811 +0000 @@ -4,83 +4,3 @@ /usr/src/debug/gromacs-4.0.7/include 40755 -/usr/src/debug/gromacs-4.0.7/include/checkpoint.h 100644 -/usr/src/debug/gromacs-4.0.7/include/confio.h 100644 -/usr/src/debug/gromacs-4.0.7/include/constr.h 100644 -/usr/src/debug/gromacs-4.0.7/include/copyrite.h 100644 -/usr/src/debug/gromacs-4.0.7/include/coulomb.h 100644 /usr/src/debug/gromacs-4.0.7/include/dihre.h 100644 -/usr/src/debug/gromacs-4.0.7/include/disre.h 100644 -/usr/src/debug/gromacs-4.0.7/include/domdec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/ebin.h 100644 -/usr/src/debug/gromacs-4.0.7/include/edsam.h 100644 -/usr/src/debug/gromacs-4.0.7/include/enxio.h 100644 -/usr/src/debug/gromacs-4.0.7/include/filenm.h 100644 -/usr/src/debug/gromacs-4.0.7/include/force.h 100644 -/usr/src/debug/gromacs-4.0.7/include/futil.h 100644 -/usr/src/debug/gromacs-4.0.7/include/gmx_fatal.h 100644 -/usr/src/debug/gromacs-4.0.7/include/gmx_random.h 100644 -/usr/src/debug/gromacs-4.0.7/include/gmx_wallcycle.h 100644 -/usr/src/debug/gromacs-4.0.7/include/gmxcomplex.h 100644 -/usr/src/debug/gromacs-4.0.7/include/gmxfio.h 100644 -/usr/src/debug/gromacs-4.0.7/include/main.h 100644 -/usr/src/debug/gromacs-4.0.7/include/mdatoms.h 100644 -/usr/src/debug/gromacs-4.0.7/include/mdebin.h 100644 -/usr/src/debug/gromacs-4.0.7/include/mdrun.h 100644 -/usr/src/debug/gromacs-4.0.7/include/mshift.h 100644 -/usr/src/debug/gromacs-4.0.7/include/mtop_util.h 100644 -/usr/src/debug/gromacs-4.0.7/include/mvdata.h 100644 -/usr/src/debug/gromacs-4.0.7/include/names.h 100644 -/usr/src/debug/gromacs-4.0.7/include/network.h 100644 -/usr/src/debug/gromacs-4.0.7/include/ns.h 100644 -/usr/src/debug/gromacs-4.0.7/include/orires.h 100644 -/usr/src/debug/gromacs-4.0.7/include/partdec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/pbc.h 100644 -/usr/src/debug/gromacs-4.0.7/include/pme.h 100644 -/usr/src/debug/gromacs-4.0.7/include/pppm.h 100644 -/usr/src/debug/gromacs-4.0.7/include/pull.h 100644 -/usr/src/debug/gromacs-4.0.7/include/qmmm.h 100644 -/usr/src/debug/gromacs-4.0.7/include/random.h 100644 -/usr/src/debug/gromacs-4.0.7/include/readinp.h 100644 -/usr/src/debug/gromacs-4.0.7/include/shellfc.h 100644 -/usr/src/debug/gromacs-4.0.7/include/smalloc.h 100644 -/usr/src/debug/gromacs-4.0.7/include/statutil.h 100644 -/usr/src/debug/gromacs-4.0.7/include/strdb.h 100644 -/usr/src/debug/gromacs-4.0.7/include/string2.h 100644 -/usr/src/debug/gromacs-4.0.7/include/tgroup.h 100644 -/usr/src/debug/gromacs-4.0.7/include/trnio.h 100644 -/usr/src/debug/gromacs-4.0.7/include/txtdump.h 100644 -/usr/src/debug/gromacs-4.0.7/include/typedefs.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types 40755 -/usr/src/debug/gromacs-4.0.7/include/types/atoms.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/block.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/commrec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/constr.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/energy.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/enums.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/fcdata.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/filenm.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/forcerec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/graph.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/group.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/idef.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/ifunc.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/inputrec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/mdatom.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/nblist.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/nrnb.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/ns.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/nsgrid.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/pbc.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/qmmmrec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/shellfc.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/simple.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/state.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/symtab.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/topology.h 100644 -/usr/src/debug/gromacs-4.0.7/include/types/trx.h 100644 -/usr/src/debug/gromacs-4.0.7/include/update.h 100644 -/usr/src/debug/gromacs-4.0.7/include/vcm.h 100644 -/usr/src/debug/gromacs-4.0.7/include/vec.h 100644 -/usr/src/debug/gromacs-4.0.7/include/vsite.h 100644 -/usr/src/debug/gromacs-4.0.7/include/xtcio.h 100644 -/usr/src/debug/gromacs-4.0.7/include/xvgr.h 100644 /usr/src/debug/gromacs-4.0.7/src 40755 @@ -104,9 +24,3 @@ Requires: /usr/lib/debug/lib64/ld-linux-x86-64.so.2.debug -Requires: /usr/lib/debug/usr/lib64/openmpi/lib/libmpi.so.1.debug -Requires: debug64(libc.so.6) -Requires: debug64(libgmx_mpi.so.5) -Requires: debug64(libgmx_mpi_d.so.5) -Requires: debug64(libm.so.6) -Requires: debug64(libmd_mpi.so.5) -Requires: debug64(libmd_mpi_d.so.5) +Requires: gromacs-mpi-libs-debuginfo = 4.0.7-alt8 Requires: rpmlib(PayloadIsLzma) --- gromacs-mpi-libs-4.0.7-alt8.x86_64.rpm.repo 2012-08-11 20:29:06.000000000 +0000 +++ gromacs-mpi-libs-4.0.7-alt8.x86_64.rpm.hasher 2019-04-14 04:19:00.770214089 +0000 @@ -17,2 +17,3 @@ Requires: libc.so.6(GLIBC_2.11)(64bit) +Requires: libc.so.6(GLIBC_2.14)(64bit) Requires: libc.so.6(GLIBC_2.2.5)(64bit) @@ -22,5 +23,5 @@ Requires: libc.so.6(GLIBC_2.7)(64bit) -Requires: libfftw3.so.3()(64bit) >= set:njvWohu96CktcRqXhkPvHBAu6qHBD02ZmK8KoqUbFM1OiA0 +Requires: libfftw3.so.3()(64bit) >= set:lhRviZyOH3Z6fGJT03sbjTGvskrJcZc8YJd6Z40NTd1 Requires: rpmlib(SetVersions) -Requires: libfftw3f.so.3()(64bit) >= set:njd9yz66TfRRr1P91P6VQRZaA59LbaV5uJsDO2VZmyMt3k0 +Requires: libfftw3f.so.3()(64bit) >= set:lhFZpi5UEx4HyjpRfT63zoy92T3kgVbCLRWJcO8HL3 Requires: libgsl.so.0()(64bit) >= set:qmkdQnOro2KmlIXqZDc4OU3MRrrijCppBDL3ZvW6BZbfFFC4rJx1