<86>Apr 14 03:35:14 userdel[125023]: delete user 'rooter' <86>Apr 14 03:35:14 groupadd[125047]: group added to /etc/group: name=rooter, GID=663 <86>Apr 14 03:35:14 groupadd[125047]: group added to /etc/gshadow: name=rooter <86>Apr 14 03:35:14 groupadd[125047]: new group: name=rooter, GID=663 <86>Apr 14 03:35:14 useradd[125066]: new user: name=rooter, UID=663, GID=663, home=/root, shell=/bin/bash <86>Apr 14 03:35:14 userdel[125088]: delete user 'builder' <86>Apr 14 03:35:14 userdel[125088]: removed group 'builder' owned by 'builder' <86>Apr 14 03:35:14 groupadd[125106]: group added to /etc/group: name=builder, GID=664 <86>Apr 14 03:35:14 groupadd[125106]: group added to /etc/gshadow: name=builder <86>Apr 14 03:35:14 groupadd[125106]: new group: name=builder, GID=664 <86>Apr 14 03:35:14 useradd[125120]: new user: name=builder, UID=664, GID=664, home=/usr/src, shell=/bin/bash <13>Apr 14 03:35:49 rpmi: tex-common-0.2-alt4 1244804096 installed <13>Apr 14 03:35:49 rpmi: texlive-common-0.1-alt3 1244804816 installed <13>Apr 14 03:35:49 rpmi: xorg-xproto-devel-7.0.28-alt1 1448272470 installed <13>Apr 14 03:35:49 rpmi: libjpeg-2:1.3.1-alt0.1 1388074033 installed <13>Apr 14 03:35:49 rpmi: libpng15-1.5.28-alt1 1484572014 installed <13>Apr 14 03:35:49 rpmi: perl-Encode-2.83-alt1 1459157776 installed <13>Apr 14 03:35:49 rpmi: libexpat-2.2.4-alt0.M80P.1 1503871120 installed <13>Apr 14 03:35:49 rpmi: libtiff5-4.0.3-alt1 1348347498 installed <13>Apr 14 03:35:49 rpmi: libsqlite3-3.15.2-alt1 1480432212 installed <13>Apr 14 03:35:49 rpmi: liblcms2-2.8-alt1 1471601528 installed <13>Apr 14 03:35:49 rpmi: ca-certificates-2016.02.25-alt1 1462368370 installed <13>Apr 14 03:35:49 rpmi: libcrypto10-1.0.2n-alt0.M80P.1 1512766129 installed <13>Apr 14 03:35:49 rpmi: xorg-xextproto-devel-2:7.3.0-alt1 1389258977 installed <13>Apr 14 03:35:49 rpmi: perl-HTTP-Date-6.02-alt1 1348645274 installed <13>Apr 14 03:35:49 rpmi: libICE-1.0.9-alt1 1409902719 installed <13>Apr 14 03:35:49 rpmi: libSM-1.2.2-alt1 1391072686 installed <13>Apr 14 03:35:49 rpmi: sgml-common-0.6.3-alt15 1423664786 installed <13>Apr 14 03:35:49 rpmi: libboost_system1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:49 rpmi: libcom_err-1.42.13-alt2 1449075846 installed <13>Apr 14 03:35:49 rpmi: perl-XML-NamespaceSupport-1.11-alt3 1322003535 installed <13>Apr 14 03:35:49 rpmi: libtasn1-4.9-alt1 1469555628 installed <13>Apr 14 03:35:49 rpmi: libwayland-client-1.14.0-alt0.M80P.1 1502720500 installed <13>Apr 14 03:35:49 rpmi: libnspr-1:4.20-alt1 p8.216526.40 1542382588 installed <13>Apr 14 03:35:49 rpmi: libnss-3.40.0-alt0.M80P.1 p8.216526.44 1542814585 installed <13>Apr 14 03:35:49 rpmi: libpng12-1.2.50-alt2 1347753407 installed <13>Apr 14 03:35:49 rpmi: libidn2-2.0.4-alt3.M80P.1 1520307194 installed <13>Apr 14 03:35:49 rpmi: libnettle6-3.4.1-alt1 p8.217493.100 1544204548 installed <13>Apr 14 03:35:49 rpmi: libICE-devel-1.0.9-alt1 1409902719 installed <13>Apr 14 03:35:49 rpmi: xorg-fixesproto-devel-1:5.0-alt1 1300091058 installed <13>Apr 14 03:35:49 rpmi: libjasper-1.900.1-alt3 1391718482 installed <13>Apr 14 03:35:49 rpmi: qt4-mobility-common-1.2.2-alt3 1432058328 installed <13>Apr 14 03:35:49 rpmi: zlib-devel-1.2.8-alt1 1371079009 installed <13>Apr 14 03:35:50 rpmi: qt4-common-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:50 rpmi: libqt4-core-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:50 rpmi: libqt4-sql-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:50 rpmi: libqt4-xml-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:50 rpmi: libnumpy-1:1.12.1-alt0.M80P.1 1496160663 installed <13>Apr 14 03:35:50 rpmi: libopenblas-0.2.14-alt1.git20150324 1433158855 installed <13>Apr 14 03:35:50 rpmi: xorg-videoproto-devel-2.3.2-alt1 1391068637 installed <13>Apr 14 03:35:50 rpmi: xorg-randrproto-devel-1:1.5.0-alt1 1431936131 installed <13>Apr 14 03:35:50 rpmi: xorg-renderproto-devel-0.11.1-alt3 1303465056 installed <13>Apr 14 03:35:50 rpmi: xorg-inputproto-devel-1:2.3-alt1 1362636518 installed <13>Apr 14 03:35:50 rpmi: xorg-kbproto-devel-1.0.6-alt1 1332531883 installed <13>Apr 14 03:35:50 rpmi: perl-LWP-MediaTypes-6.02-alt1 1329754558 installed <13>Apr 14 03:35:50 rpmi: perl-Compress-Raw-Zlib-2.069-alt1.1 1448470036 installed <13>Apr 14 03:35:50 rpmi: perl-libnet-1:3.08-alt1 1458419902 installed <13>Apr 14 03:35:50 rpmi: perl-URI-1.71-alt1 1455181348 installed <13>Apr 14 03:35:50 rpmi: perl-XML-SAX-Base-1.08-alt1 1317871344 installed <13>Apr 14 03:35:50 rpmi: libwayland-server-1.14.0-alt0.M80P.1 1502720500 installed <13>Apr 14 03:35:50 rpmi: libopenjpeg2.0-2.2.0-alt0.M80P.1 1503526491 installed <13>Apr 14 03:35:50 rpmi: perl-Term-ANSIColor-4.05-alt1 1458575791 installed <13>Apr 14 03:35:50 rpmi: libkpathsea-2008.0-alt0.15.6 1449446882 installed <13>Apr 14 03:35:50 rpmi: libXau-1.0.8-alt1 1369565807 installed <13>Apr 14 03:35:50 rpmi: libOpenSP-1.5.2-alt3.qa1 1365943428 installed <13>Apr 14 03:35:50 rpmi: libverto-0.2.6-alt1_6 1455633234 installed <13>Apr 14 03:35:50 rpmi: libgdbm-1.8.3-alt10 1454943313 installed <13>Apr 14 03:35:50 rpmi: perl-DBM-1:5.22.3-alt0.M80P.1 1485958065 installed <13>Apr 14 03:35:50 rpmi: libverto-devel-0.2.6-alt1_6 1455633234 installed <13>Apr 14 03:35:50 rpmi: OpenSP-1.5.2-alt3.qa1 1365943428 installed <13>Apr 14 03:35:50 rpmi: libXau-devel-1.0.8-alt1 1369565807 installed <13>Apr 14 03:35:50 rpmi: perl-WWW-RobotRules-6.02-alt1 1329756211 installed <13>Apr 14 03:35:50 rpmi: libqt4-sql-sqlite-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:50 rpmi: libqt4-clucene-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:50 rpmi: libqt4-test-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:50 rpmi: rpm-macros-qt4-4.8.7-alt7 1461590563 installed <13>Apr 14 03:35:50 rpmi: libpng-devel-1.5.28-alt1 1484572014 installed <13>Apr 14 03:35:50 rpmi: libSM-devel-1.2.2-alt1 1391072686 installed <13>Apr 14 03:35:50 rpmi: libhogweed4-3.4.1-alt1 p8.217493.100 1544204548 installed <13>Apr 14 03:35:50 rpmi: nss-utils-3.40.0-alt0.M80P.1 p8.216526.44 1542814585 installed <13>Apr 14 03:35:50 rpmi: libwayland-cursor-1.14.0-alt0.M80P.1 1502720500 installed <13>Apr 14 03:35:50 rpmi: libcom_err-devel-1.42.13-alt2 1449075846 installed <13>Apr 14 03:35:50 rpmi: libboost_atomic1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:50 rpmi: libboost_random1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:50 rpmi: libboost_chrono1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:50 rpmi: libboost_timer1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:50 rpmi: libboost_thread1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:50 rpmi: perl-File-Listing-6.04-alt1 1329758996 installed <13>Apr 14 03:35:50 rpmi: libmng-1.0.10-alt2.M80P.1 1476964805 installed <13>Apr 14 03:35:50 rpmi: perl-Encode-Locale-1.05-alt1 1444608613 installed <13>Apr 14 03:35:50 rpmi: perl-IO-HTML-1.001-alt1 1404821752 installed <13>Apr 14 03:35:50 rpmi: texlive-doc-base-2008.0-alt0.10 1238420746 installed <13>Apr 14 03:35:51 rpmi: fonts-type1-tipa-tex-1.3-alt4 1246545601 installed <13>Apr 14 03:35:51 rpmi: texmf-tex4ht-1.0.2009_06_11_1038-alt1 1328304130 installed <13>Apr 14 03:35:51 rpmi: rpm-macros-ubt-0.2-alt1.M80P.1 1488269670 installed <13>Apr 14 03:35:51 rpmi: libwebp6-0.5.2-alt1.M80P.1 1504615878 installed <13>Apr 14 03:35:51 rpmi: libalsa-1:1.1.0-alt1.1.1 1454429213 installed <13>Apr 14 03:35:51 rpmi: libwrap-1:7.6-alt11 1297041305 installed <13>Apr 14 03:35:51 rpmi: libxapian-1.2.23-alt1 1459318465 installed <13>Apr 14 03:35:51 rpmi: python-module-xapian-1.2.23-alt1.M80P.1 1503464748 installed <13>Apr 14 03:35:51 rpmi: python-module-google-0.4.0-alt2.1 1457968526 installed <13>Apr 14 03:35:51 rpmi: python-module-sphinx_rtd_theme-0.1.8-alt1.git20150730.1 1457859644 installed <13>Apr 14 03:35:51 rpmi: python-sphinx-objects.inv-2.3.6.20160413-alt1 1460595508 installed <13>Apr 14 03:35:51 rpmi: python-module-z3c-3.0.0-alt2.a2.dev0.git20130313.1.1.1 1460417103 installed <13>Apr 14 03:35:51 rpmi: python-module-pycares-0.6.3-alt1.1.1 1459598195 installed <13>Apr 14 03:35:51 rpmi: python-module-certifi-2015.04.28-alt1.1 1457893771 installed <13>Apr 14 03:35:51 rpmi: pytz-zoneinfo-1:2015.4-alt1.1.1 1460413776 installed <13>Apr 14 03:35:51 rpmi: libltdl7-2.4.2-alt5 1450059753 installed <13>Apr 14 03:35:51 rpmi: libunixODBC2-2.3.4-alt1 1470328253 installed <13>Apr 14 03:35:51 rpmi: libunixODBC-devel-compat-2.3.4-alt1 1470328253 installed <13>Apr 14 03:35:51 rpmi: libunixODBC-devel-2.3.4-alt1 1470328253 installed <13>Apr 14 03:35:51 rpmi: libxblas-1.0.248-alt1 1322010716 installed <13>Apr 14 03:35:51 rpmi: libjson-c-0.12-alt1 1401212997 installed <13>Apr 14 03:35:51 rpmi: libxkbcommon-0.7.2-alt0.M80P.1 1503524837 installed <13>Apr 14 03:35:51 rpmi: libgudev-1:231-alt0.M80P.1 1487052830 installed <13>Apr 14 03:35:51 rpmi: udev-rules-1:237-alt2.M80P.6 p8+221965.100.2.1 1550786259 installed <13>Apr 14 03:35:52 rpmi: libgtk+2-locales-2.24.31-alt1 1473461664 installed <13>Apr 14 03:35:52 rpmi: liborc-0.4.27-alt1.M80P.1 1503911715 installed <13>Apr 14 03:35:52 rpmi: libgsm-1.0.13-alt8 1365910842 installed <13>Apr 14 03:35:52 rpmi: libsndfile-1.0.28-alt1.M80P.1 p8.212938.100 1536756416 installed <13>Apr 14 03:35:52 rpmi: libquadmath0-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 03:35:52 rpmi: libgfortran3-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 03:35:52 rpmi: liblapack-1:3.5.0-alt1 1401382194 installed <13>Apr 14 03:35:52 rpmi: libepoxy-1.4.3-alt0.M80P.1 1498727071 installed <13>Apr 14 03:35:52 rpmi: libdatrie-0.2.8-alt1_5 1410185969 installed <13>Apr 14 03:35:52 rpmi: libthai-0.1.24-alt1_1 1459282110 installed <13>Apr 14 03:35:52 rpmi: libusb-1.0.21-alt0.M80P.1 1485147102 installed <13>Apr 14 03:35:52 rpmi: libboost_python1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:52 rpmi: libasyncns-0.8-alt2.qa1 1365949819 installed <13>Apr 14 03:35:52 rpmi: xorg-recordproto-devel-1:1.14.2-alt1 1332531993 installed <13>Apr 14 03:35:52 rpmi: xorg-xineramaproto-devel-1:1.2.1-alt1 1294328562 installed <13>Apr 14 03:35:52 rpmi: rpm-macros-kde-common-devel-14.12.1-alt1 1422279175 installed <13>Apr 14 03:35:52 rpmi: libunwind-1.1-alt2 1442339814 installed <13>Apr 14 03:35:52 rpmi: strace-4.22-alt1 1522934588 installed <13>Apr 14 03:35:52 rpmi: rpm-utils-0.9.21-alt1 1463014856 installed <13>Apr 14 03:35:52 rpmi: icon-theme-hicolor-0.17-alt1 1505715846 installed <13>Apr 14 03:35:52 rpmi: perl-IO-Socket-IP-0.37-alt1 1444921335 installed <13>Apr 14 03:35:52 rpmi: perl-Compress-Raw-Bzip2-2.069-alt1.1 1448470068 installed <13>Apr 14 03:35:52 rpmi: perl-IO-Compress-2.069-alt1 1444618007 installed <13>Apr 14 03:35:52 rpmi: perl-HTTP-Message-6.11-alt1 1444616672 installed <13>Apr 14 03:35:52 rpmi: perl-HTTP-Cookies-6.01-alt1 1329759964 installed <13>Apr 14 03:35:52 rpmi: perl-HTTP-Negotiate-6.01-alt1 1329760563 installed <13>Apr 14 03:35:52 rpmi: perl-Net-HTTP-6.09-alt1 1432310023 installed <13>Apr 14 03:35:52 rpmi: perl-HTML-Tagset-3.20-alt2 1317725093 installed <13>Apr 14 03:35:52 rpmi: perl-HTML-Parser-3.72-alt1 1455170565 installed <13>Apr 14 03:35:52 rpmi: perl-libwww-6.15-alt1 1449505512 installed <13>Apr 14 03:35:52 rpmi: libgdk-pixbuf-locales-2.36.11-alt0.M80P.1 1507198237 installed <13>Apr 14 03:35:52 rpmi: gtk+3-themes-incompatible-3.20-alt3 1461944560 installed <13>Apr 14 03:35:52 rpmi: libproxy-0.4.14-alt0.M80P.1 1491211278 installed <13>Apr 14 03:35:52 rpmi: gcc-c++-common-1.4.20-alt1 1432315196 installed <13>Apr 14 03:35:52 rpmi: libstdc++5-devel-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 03:35:52 rpmi: mailx-8.1.2-alt7 1366314831 installed <13>Apr 14 03:35:52 rpmi: sharutils-4.6.3-alt1.1.qa2.1 1449219807 installed <13>Apr 14 03:35:52 rpmi: ncompress-4.2.4.4-alt1 1366160439 installed <13>Apr 14 03:35:52 rpmi: libjbig-2.1-alt1 1401380921 installed <13>Apr 14 03:35:52 rpmi: xorg-rgb-1.0.4-alt1.qa1 1366268675 installed <13>Apr 14 03:35:52 rpmi: libnetpbm-10.35.97-alt1 1447854203 installed <13>Apr 14 03:35:53 rpmi: netpbm-10.35.97-alt1 1447854203 installed <13>Apr 14 03:35:53 rpmi: t1lib-5.1.2-alt5 1326979643 installed <13>Apr 14 03:35:53 rpmi: libpaper-1.1.24-alt4 1315383473 installed <13>Apr 14 03:35:53 rpmi: libruby-2.5.1-alt0.M80P.1 1525659669 installed <13>Apr 14 03:35:53 rpmi: ruby-2.5.1-alt0.M80P.1 1525659669 installed <13>Apr 14 03:35:53 rpmi: libpixman-3:0.32.8-alt1 1447610691 installed <13>Apr 14 03:35:53 rpmi: libxshmfence-1.2-alt1 1420972191 installed <13>Apr 14 03:35:53 rpmi: libpciaccess-1:0.13.4-alt1 1431681688 installed <13>Apr 14 03:35:53 rpmi: libdrm-1:2.4.89-alt1.M80P.1 1516609380 installed <13>Apr 14 03:35:53 rpmi: libgbm-4:18.0.5-alt1.M80P.1 p8+226404.100.1.1 1554206332 installed <13>Apr 14 03:35:53 rpmi: poppler-data-0.4.8-alt1.M80P.1 1524561858 installed <13>Apr 14 03:35:53 rpmi: libgraphite2-1.3.10-alt0.M80P.1 1496411360 installed <13>Apr 14 03:35:53 rpmi: perl-Term-Cap-1.17-alt1 1445018869 installed <13>Apr 14 03:35:53 rpmi: perl-Pod-Escapes-1.07-alt1 1418767892 installed <13>Apr 14 03:35:53 rpmi: perl-Pod-Simple-3.32-alt1 1447205413 installed <13>Apr 14 03:35:53 rpmi: tcsh-6.18.01-alt2 1442313244 installed <13>Apr 14 03:35:53 rpmi: xml-utils-1:2.9.4.0.12.e905-alt1 1488560683 installed <13>Apr 14 03:35:53 rpmi: docbook-dtds-4.5-alt1 1223476557 installed <13>Apr 14 03:35:53 rpmi: openjade-1.3.2-alt13 1454948805 installed <13>Apr 14 03:35:53 rpmi: docbook-style-dsssl-1.79-alt3 1324062818 installed <13>Apr 14 03:35:53 rpmi: perl-SGMLSpm-1.03ii-alt6 1321013930 installed <13>Apr 14 03:35:53 rpmi: docbook-utils-0.6.14-alt4 1285177233 installed <13>Apr 14 03:35:53 rpmi: libjsoncpp1-1.7.2-alt3.M80P.1 1518818590 installed <13>Apr 14 03:35:53 rpmi: publicsuffix-list-dafsa-20190329-alt1 p8+226349.100.1.1 1554128046 installed <13>Apr 14 03:35:53 rpmi: libpsl-0.18.0-alt0.M80P.1 1502785107 installed <13>Apr 14 03:35:53 rpmi: libnghttp2-1.8.0-alt1 1456818805 installed <13>Apr 14 03:35:53 rpmi: libbrotlicommon0-1.0.4-alt0.M80P.1 1528205024 installed <13>Apr 14 03:35:53 rpmi: libbrotlidec0-1.0.4-alt0.M80P.1 1528205024 installed <13>Apr 14 03:35:53 rpmi: liblzo2-2.08-alt1 1405435908 installed <13>Apr 14 03:35:54 rpmi: libarchive13-3.2.1-alt1 1467155787 installed <13>Apr 14 03:35:54 rpmi: rpm-macros-cmake-3.6.3-alt0.1.M80P.1 1505734848 installed <13>Apr 14 03:35:54 rpmi: cmake-modules-3.6.3-alt0.1.M80P.1 1505734959 installed <13>Apr 14 03:35:54 rpmi: boost-python-headers-1:1.58.0-alt4 1463060108 installed <13>Apr 14 03:35:54 rpmi: libboost_test1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:54 rpmi: libboost_serialization1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:54 rpmi: libboost_iostreams1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:54 rpmi: libicu56-1:5.6.1-alt1.1 1458012333 installed <13>Apr 14 03:35:54 rpmi: libboost_regex1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:54 rpmi: libboost_graph1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:54 rpmi: libboost_date_time1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:54 rpmi: libboost_container1.58.0-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:35:54 rpmi: libatk-locales-2.24.0-alt0.M80P.1 1504535386 installed <13>Apr 14 03:35:54 rpmi: libatk-2.24.0-alt0.M80P.1 1504535253 installed <13>Apr 14 03:35:54 rpmi: rpm-build-xdg-0.2-alt1 1250461503 installed <13>Apr 14 03:35:54 rpmi: shared-mime-info-1.9-alt0.M80P.1 1506021412 installed <13>Apr 14 03:35:54 rpmi: gsettings-desktop-schemas-data-3.24.1-alt0.M80P.1 1504768054 installed <13>Apr 14 03:35:54 rpmi: liblz4-1:1.7.5-alt1 1488766699 installed <13>Apr 14 03:35:55 rpmi: libgpg-error-1.31-alt1.M80P.1 1529024730 installed <13>Apr 14 03:35:55 rpmi: libgcrypt20-1.8.3-alt4 p8+219793.200.6.1 1551112986 installed <13>Apr 14 03:35:55 rpmi: libsystemd-1:237-alt2.M80P.6 p8+221965.100.2.1 1550786217 installed <13>Apr 14 03:35:55 rpmi: libdbus-1.10.24-alt4.M80P.1 1518773282 installed <13>Apr 14 03:35:55 rpmi: libqt4-dbus-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:55 rpmi: libqt4-network-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:55 rpmi: libqt4-script-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:55 rpmi: libxslt-1.1.28-alt4 1448210404 installed <13>Apr 14 03:35:55 rpmi: libqt4-xmlpatterns-4.8.7-alt7 1461589658 installed <13>Apr 14 03:35:55 rpmi: libavahi-0.6.31-alt7.M80P.1 1526318593 installed <13>Apr 14 03:35:55 rpmi: libdbus-devel-1.10.24-alt4.M80P.1 1518773282 installed <13>Apr 14 03:35:55 rpmi: libX11-locales-3:1.6.3-alt1 1431956885 installed <13>Apr 14 03:35:55 rpmi: libXdmcp-1.1.1-alt1 1334617699 installed <13>Apr 14 03:35:55 rpmi: libxcb-1.12-alt2 p8.218219.300 1545313310 installed <13>Apr 14 03:35:55 rpmi: libX11-3:1.6.3-alt1 1431956911 installed <13>Apr 14 03:35:55 rpmi: libXext-1.3.3-alt1 1409902932 installed <13>Apr 14 03:35:55 rpmi: libXrender-0.9.8-alt1 1371312110 installed <13>Apr 14 03:35:55 rpmi: libXfixes-5.0.1-alt1 1369809606 installed <13>Apr 14 03:35:55 rpmi: libXinerama-1.1.3-alt1 1369984571 installed <13>Apr 14 03:35:55 rpmi: libXcursor-1.1.15-alt1.M80P.1 1512373713 installed <13>Apr 14 03:35:55 rpmi: libXrandr-1.5.0-alt1 1431936188 installed <13>Apr 14 03:35:55 rpmi: libXi-1.7.9-alt1.M80P.1 1515766146 installed <13>Apr 14 03:35:55 rpmi: libXt-1.1.4-alt1 1369984716 installed <13>Apr 14 03:35:55 rpmi: libXdamage-1.1.3-alt4 1297162596 installed <13>Apr 14 03:35:55 rpmi: libXmu-1.1.2-alt1 1391072528 installed <13>Apr 14 03:35:55 rpmi: libXpm-3.5.11-alt1 1391072398 installed <13>Apr 14 03:35:55 rpmi: libXtst-1.2.2-alt1 1369984880 installed <13>Apr 14 03:35:55 rpmi: libat-spi2-core-2.24.1-alt0.M80P.1 1504536015 installed <13>Apr 14 03:35:55 rpmi: libXcomposite-0.4.3-alt3 1297306939 installed <13>Apr 14 03:35:55 rpmi: libXaw-1.0.12-alt1 1391072621 installed <13>Apr 14 03:35:55 rpmi: libXxf86vm-1.1.3-alt1 1369984824 installed <13>Apr 14 03:35:55 rpmi: libGL-4:18.0.5-alt1.M80P.1 p8+226404.100.1.1 1554206332 installed <13>Apr 14 03:35:55 rpmi: libEGL-4:18.0.5-alt1.M80P.1 p8+226404.100.1.1 1554206332 installed <13>Apr 14 03:35:55 rpmi: libGLU-4:9.0.0-alt1 1347643776 installed <13>Apr 14 03:35:55 rpmi: libGLEW2.0-2.0.0-alt1 1470176354 installed <13>Apr 14 03:35:55 rpmi: libwayland-egl-4:18.0.5-alt1.M80P.1 p8+226404.100.1.1 1554206332 installed <13>Apr 14 03:35:55 rpmi: libXv-1.0.10-alt1 1391072328 installed <13>Apr 14 03:35:56 rpmi: libxcb-devel-1.12-alt2 p8.218219.300 1545313310 installed <13>Apr 14 03:35:57 rpmi: libX11-devel-3:1.6.3-alt1 1431956911 installed <13>Apr 14 03:35:57 rpmi: libXext-devel-1.3.3-alt1 1409902932 installed <13>Apr 14 03:35:57 rpmi: libGL-devel-4:18.0.5-alt1.M80P.1 p8+226404.100.1.1 1554206332 installed <13>Apr 14 03:35:57 rpmi: libGLU-devel-4:9.0.0-alt1 1347643776 installed <13>Apr 14 03:35:57 rpmi: libXfixes-devel-5.0.1-alt1 1369809606 installed <13>Apr 14 03:35:57 rpmi: libXi-devel-1.7.9-alt1.M80P.1 1515766146 installed <13>Apr 14 03:35:57 rpmi: libXrender-devel-0.9.8-alt1 1371312110 installed <13>Apr 14 03:35:57 rpmi: libXrandr-devel-1.5.0-alt1 1431936188 installed <13>Apr 14 03:35:57 rpmi: libXtst-devel-1.2.2-alt1 1369984880 installed <13>Apr 14 03:35:57 rpmi: libXv-devel-1.0.10-alt1 1391072328 installed <13>Apr 14 03:35:57 rpmi: libXcursor-devel-1.1.15-alt1.M80P.1 1512373713 installed <13>Apr 14 03:35:57 rpmi: libXinerama-devel-1.1.3-alt1 1369984571 installed <13>Apr 14 03:35:57 rpmi: libpulseaudio-9.0-alt2 1469793979 installed <13>Apr 14 03:35:57 rpmi: libtinfo-devel-5.9-alt8 1456756459 installed <13>Apr 14 03:35:57 rpmi: libncurses-devel-5.9-alt8 1456756459 installed <13>Apr 14 03:35:57 rpmi: python-modules-curses-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:35:57 rpmi: libkeyutils-1.5.10-alt0.M80P.2 p8+216694.100.6.1 1547827915 installed <13>Apr 14 03:35:57 rpmi: libGLEW-devel-2.0.0-alt1 1470176354 installed <13>Apr 14 03:35:57 rpmi: gcc5-c++-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 14 03:35:57 rpmi: kde-common-devel-14.12.1-alt1 1422279175 installed <13>Apr 14 03:35:57 rpmi: rpm-build-ubt-0.3.1-alt1.M80P.1 1513692283 installed <13>Apr 14 03:35:58 rpmi: eigen3-3.3.3-alt0.M80P.1 1496859227 installed <13>Apr 14 03:35:58 rpmi: libgio-2.52.3-alt0.M80P.1 1504533271 installed <13>Apr 14 03:35:59 rpmi: texlive-base-bin-2008.0-alt0.15.6 1449446882 installed <13>Apr 14 03:36:01 rpmi: texlive-latex-base-2008.0-alt0.15 1300007455 installed <13>Apr 14 03:36:01 rpmi: texlive-base-2008.0-alt0.15 1300007455 installed <13>Apr 14 03:36:01 rpmi: gobject-introspection-1.52.1-alt0.M80P.1 1504533480 installed <86>Apr 14 03:36:01 groupadd[44242]: group added to /etc/group: name=_keytab, GID=499 <86>Apr 14 03:36:01 groupadd[44242]: group added to /etc/gshadow: name=_keytab <86>Apr 14 03:36:01 groupadd[44242]: new group: name=_keytab, GID=499 <13>Apr 14 03:36:01 rpmi: libkrb5-1.14.6-alt1.M80P.1 1525355673 installed <13>Apr 14 03:36:01 rpmi: libgdk-pixbuf-2.36.11-alt0.M80P.1 1507198160 installed <13>Apr 14 03:36:01 rpmi: libssl10-1.0.2n-alt0.M80P.1 1512766129 installed <13>Apr 14 03:36:01 rpmi: libcups-2.1.0-alt2.M80P.4 p8+223280.100.1.1 1551372192 installed <13>Apr 14 03:36:01 rpmi: libgstreamer1.0-1.12.3-alt0.M80P.1 1505901068 installed <13>Apr 14 03:36:02 rpmi: libp11-kit-0.23.8-alt1.M80P.1 1504877563 installed <13>Apr 14 03:36:02 rpmi: perl-Pod-Usage-1.68-alt1 1451923699 installed <86>Apr 14 03:36:02 groupadd[45037]: group added to /etc/group: name=messagebus, GID=498 <86>Apr 14 03:36:02 groupadd[45037]: group added to /etc/gshadow: name=messagebus <86>Apr 14 03:36:02 groupadd[45037]: new group: name=messagebus, GID=498 <86>Apr 14 03:36:02 useradd[45093]: new user: name=messagebus, UID=499, GID=498, home=/run/dbus, shell=/dev/null <13>Apr 14 03:36:02 rpmi: dbus-1.10.24-alt4.M80P.1 1518773282 installed <13>Apr 14 03:36:02 rpmi: libgst-plugins1.0-1.12.3-alt0.M80P.1 1505901518 installed <13>Apr 14 03:36:02 rpmi: gtk-update-icon-cache-2.24.31-alt1 1473461609 installed <13>Apr 14 03:36:02 rpmi: gobject-introspection-x11-1.52.1-alt0.M80P.1 1504533480 installed <13>Apr 14 03:36:02 rpmi: texmf-latex-tipa-1.3-alt4 1246545601 installed <13>Apr 14 03:36:02 rpmi: gsettings-desktop-schemas-3.24.1-alt0.M80P.1 1504768052 installed <13>Apr 14 03:36:02 rpmi: libgusb-0.2.11-alt0.M80P.1 1503526571 installed <13>Apr 14 03:36:02 rpmi: libcolord-1.3.5-alt0.M80P.1 1488875506 installed <13>Apr 14 03:36:02 rpmi: perl-XML-SAX-0.99-alt2 1384805188 installed <13>Apr 14 03:36:02 rpmi: libharfbuzz-1.6.3-alt0.M80P.1 1509918814 installed <13>Apr 14 03:36:02 rpmi: libfreetype-2.8-alt0.M80P.3 1505462817 installed <13>Apr 14 03:36:02 rpmi: fontconfig-2.12.6-alt1.M80P.1 1506008910 installed Updating fonts cache: <29>Apr 14 03:36:03 fontconfig: Updating fonts cache: succeeded [ DONE ] <13>Apr 14 03:36:03 rpmi: libqt4-gui-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:03 rpmi: libcairo-1:1.14.4-alt1 1447005495 installed <13>Apr 14 03:36:03 rpmi: libcairo-gobject-1:1.14.4-alt1 1447005495 installed <13>Apr 14 03:36:03 rpmi: libopenbabel-2.3.2-alt2 1454335712 installed <13>Apr 14 03:36:04 rpmi: libqt4-designer-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:04 rpmi: libqt4-opengl-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:04 rpmi: libqt4-declarative-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:04 rpmi: libXft-2.3.2-alt1 1409902650 installed <13>Apr 14 03:36:04 rpmi: libpango-1.40.14-alt0.M80P.1 1510824230 installed <13>Apr 14 03:36:04 rpmi: libfreetype-devel-2.8-alt0.M80P.3 1505462817 installed <13>Apr 14 03:36:04 rpmi: fontconfig-devel-2.12.6-alt1.M80P.1 1506008910 installed <13>Apr 14 03:36:04 rpmi: libgtk+2-2.24.31-alt1 1473461609 installed <13>Apr 14 03:36:04 rpmi: libpango-gir-1.40.14-alt0.M80P.1 1510824230 installed <13>Apr 14 03:36:04 rpmi: perl-Tk-804.033-alt1.1 1448484960 installed <13>Apr 14 03:36:04 rpmi: libqt4-location-1.2.2-alt3 1432058328 installed <13>Apr 14 03:36:04 rpmi: libqt4-sensors-1.2.2-alt3 1432058328 installed <13>Apr 14 03:36:05 rpmi: libqt4-webkit-1:2.3.4-alt3 1453755870 installed <13>Apr 14 03:36:05 rpmi: libphonon-4.8.3-alt1 1418134063 installed <13>Apr 14 03:36:05 rpmi: libphononexperimental-4.8.3-alt1 1418134063 installed <13>Apr 14 03:36:05 rpmi: libqt4-qt3support-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:05 rpmi: libqt4-svg-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:05 rpmi: libqt4-uitools-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:05 rpmi: libqt4-multimedia-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:05 rpmi: libqt4-help-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:05 rpmi: libqt4-4.8.7-alt7 1461590563 installed <13>Apr 14 03:36:05 rpmi: libqt4-scripttools-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:05 rpmi: fonts-type1-urw-3:1.0.7pre44-alt3 p8+224868.100.1.1 1552412385 installed <13>Apr 14 03:36:06 rpmi: libgs-9.20-alt1.M80P.1 1494700569 installed <13>Apr 14 03:36:06 rpmi: perl-XML-Simple-2.22-alt1 1449506808 installed <13>Apr 14 03:36:06 rpmi: icon-naming-utils-0.8.90-alt1 1236573102 installed <13>Apr 14 03:36:07 rpmi: icon-theme-adwaita-3.24.0-alt0.M80P.1 1504567873 installed <13>Apr 14 03:36:07 rpmi: dbus-tools-gui-1.10.24-alt4.M80P.1 1518773282 installed <13>Apr 14 03:36:07 rpmi: at-spi2-core-2.24.1-alt0.M80P.1 1504536015 installed <13>Apr 14 03:36:07 rpmi: at-spi2-atk-2.24.1-alt0.M80P.1 1504536077 installed <13>Apr 14 03:36:07 rpmi: libgnutls30-3.6.7-alt0.M80P.1 p8+225835.100.2.1 1554226496 installed <13>Apr 14 03:36:07 rpmi: glib-networking-2.50.0-alt1.M80P.1 1503575484 installed <13>Apr 14 03:36:07 rpmi: libsoup-2.62.2-alt0.M80P.1 1528058397 installed <13>Apr 14 03:36:07 rpmi: libsoup-gnome-2.62.2-alt0.M80P.1 1528058397 installed <13>Apr 14 03:36:07 rpmi: librest-0.8.1-alt0.M80P.1 1509920808 installed <13>Apr 14 03:36:07 rpmi: libgdk-pixbuf-gir-2.36.11-alt0.M80P.1 1507198160 installed <86>Apr 14 03:36:07 groupadd[62637]: group added to /etc/group: name=sasl, GID=497 <86>Apr 14 03:36:07 groupadd[62637]: group added to /etc/gshadow: name=sasl <86>Apr 14 03:36:07 groupadd[62637]: new group: name=sasl, GID=497 <13>Apr 14 03:36:07 rpmi: libsasl2-3-2.1.26-alt7 1479477445 installed <13>Apr 14 03:36:07 rpmi: libldap-2.4.45-alt1.M80P.1 1513980376 installed <13>Apr 14 03:36:07 rpmi: libcurl-7.64.0-alt1 p8+220788.100.1.1 1549495393 installed <13>Apr 14 03:36:07 rpmi: libpoppler72-0.61.1-alt1.M80P.1 1524829028 installed <13>Apr 14 03:36:07 rpmi: poppler-0.61.1-alt1.M80P.1 1524829028 installed <13>Apr 14 03:36:07 rpmi: libkrb5-ldap-1.14.6-alt1.M80P.1 1525355673 installed <13>Apr 14 03:36:07 rpmi: libkrb5-devel-1.14.6-alt1.M80P.1 1525355673 installed <13>Apr 14 03:36:07 rpmi: libssl-devel-1.0.2n-alt0.M80P.1 1512766129 installed <13>Apr 14 03:36:07 rpmi: libatk-gir-2.24.0-alt0.M80P.1 1504535253 installed <13>Apr 14 03:36:07 rpmi: texlive-font-utils-2008.0-alt0.15.6 1449446882 installed <13>Apr 14 03:36:07 rpmi: texlive-lang-tibetan-2008.0-alt0.14 1248958512 installed <13>Apr 14 03:36:08 rpmi: texlive-generic-extra-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:08 rpmi: texlive-latex3-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:08 rpmi: texlive-lang-polish-2008.0-alt0.14 1248958512 installed <13>Apr 14 03:36:08 rpmi: libdconf-0.26.1-alt0.M80P.1 1507197872 installed <13>Apr 14 03:36:08 rpmi: dconf-0.26.1-alt0.M80P.1 1507197872 installed <13>Apr 14 03:36:08 rpmi: libgtk+3-schemas-3.22.26-alt0.M80P.1 1510825424 installed <13>Apr 14 03:36:08 rpmi: libpolkit-0.113-alt2 1469643478 installed <86>Apr 14 03:36:08 groupadd[66344]: group added to /etc/group: name=colord, GID=496 <86>Apr 14 03:36:08 groupadd[66344]: group added to /etc/gshadow: name=colord <86>Apr 14 03:36:08 groupadd[66344]: new group: name=colord, GID=496 <86>Apr 14 03:36:08 useradd[66393]: new user: name=colord, UID=498, GID=496, home=/var/colord, shell=/dev/null <13>Apr 14 03:36:08 rpmi: colord-1.3.5-alt0.M80P.1 1488875506 installed <13>Apr 14 03:36:08 rpmi: libjson-glib-1.2.8-alt0.M80P.1 1489956779 installed <13>Apr 14 03:36:09 rpmi: libgtk+3-3.22.26-alt0.M80P.1 1510825302 installed <13>Apr 14 03:36:09 rpmi: libgtk+3-gir-3.22.26-alt0.M80P.1 1510825302 installed <13>Apr 14 03:36:09 rpmi: perl-XML-LibXML-2.0124-alt1 1458750523 installed <13>Apr 14 03:36:09 rpmi: libp11-kit-trust-0.23.8-alt1.M80P.1 1504877563 installed <13>Apr 14 03:36:09 rpmi: perl-podlators-4.07-alt1 1458574366 installed <13>Apr 14 03:36:10 rpmi: boost-devel-headers-1:1.58.0-alt4 1463060108 installed <13>Apr 14 03:36:10 rpmi: boost-devel-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:36:10 rpmi: dbus-tools-1.10.24-alt4.M80P.1 1518773282 installed <13>Apr 14 03:36:10 rpmi: cmake-3.6.3-alt0.1.M80P.1 1505734848 installed <13>Apr 14 03:36:10 rpmi: libopenbabel-devel-2.3.2-alt2 1454335712 installed <13>Apr 14 03:36:10 rpmi: python-modules-compiler-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:10 rpmi: libwxGTK-2:2.8.12-alt1.svn20131012.3.M80P.1 1491241128 installed <13>Apr 14 03:36:10 rpmi: wxGTK-2:2.8.12-alt1.svn20131012.3.M80P.1 1491241128 installed <13>Apr 14 03:36:10 rpmi: phonon-devel-4.8.3-alt1 1418134063 installed <13>Apr 14 03:36:11 rpmi: ghostscript-common-9.20-alt1.M80P.1 1494700614 installed <13>Apr 14 03:36:11 rpmi: ghostscript-classic-9.20-alt1.M80P.1 1494700569 installed <13>Apr 14 03:36:11 rpmi: latex2html-2012-alt1 1450368036 installed <13>Apr 14 03:36:11 rpmi: openbabel-2.3.2-alt2 1454335712 installed <13>Apr 14 03:36:11 rpmi: python-modules-email-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: libqt4-devel-4.8.7-alt7 1461589658 installed <13>Apr 14 03:36:12 rpmi: libqt4-webkit-devel-1:2.3.4-alt3 1453755870 installed <13>Apr 14 03:36:12 rpmi: python-modules-unittest-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-modules-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-modules-xml-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-modules-json-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-module-six-1.10.0-alt7 1496087616 installed <13>Apr 14 03:36:12 rpmi: python-modules-ctypes-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-modules-encodings-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-modules-multiprocessing-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-modules-logging-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-module-simplejson-3.15.0-alt1.M80P.1 1528995430 installed <13>Apr 14 03:36:12 rpmi: python-tools-2to3-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-module-whoosh-2.7.0-alt1.hg20150805.1.1 1457859779 installed <13>Apr 14 03:36:12 rpmi: python-module-cycler-0.10.0-alt1 1493854024 installed <13>Apr 14 03:36:12 rpmi: python-module-webencodings-0.5.1-alt0.M80P.1 1507185481 installed <13>Apr 14 03:36:12 rpmi: python-modules-hotshot-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-modules-bsddb-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-strict-2.7.11-alt6.M80P.1 1527682534 installed <13>Apr 14 03:36:12 rpmi: python-dev-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-module-sip-4.19.3-alt0.M80P.1 1507188513 installed <13>Apr 14 03:36:12 rpmi: python-module-dateutil-2.6.0-alt0.M80P.1 1507185893 installed <13>Apr 14 03:36:12 rpmi: python-module-pyparsing-2.0.3-alt1 1423469752 installed <13>Apr 14 03:36:12 rpmi: python-module-pycurl-7.19.5.3-alt1.1.1 1459598459 installed <13>Apr 14 03:36:12 rpmi: python-module-zc-1.0.0-alt6.2 1458024144 installed <13>Apr 14 03:36:12 rpmi: python-module-pycairo-1.13.3-alt0.M80P.1 1504561359 installed <13>Apr 14 03:36:12 rpmi: python-module-pygobject3-3.24.1-alt1.M80P.1 1504561842 installed <13>Apr 14 03:36:12 rpmi: python-module-pytz-1:2015.4-alt1.1.1 1460413776 installed <13>Apr 14 03:36:12 rpmi: python-module-PyStemmer-1.0.1-alt1.2.1 1321387369 installed <13>Apr 14 03:36:12 rpmi: python-module-snowballstemmer-1.2.0-alt2.1 1457859319 installed <13>Apr 14 03:36:12 rpmi: python-module-functools32-3.2.3.2-alt1.git20150711 1438148996 installed <13>Apr 14 03:36:12 rpmi: python-module-backports-3.5.0.1-alt0.M80P.1 1525453027 installed <13>Apr 14 03:36:12 rpmi: python-module-backports.ssl_match_hostname-3.5.0.1-alt0.M80P.1 1525453027 installed <13>Apr 14 03:36:12 rpmi: python-modules-wsgiref-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-module-py-1.4.34-alt0.M80P.1 1503506764 installed <13>Apr 14 03:36:12 rpmi: python-module-markupsafe-0.23-alt1.2.1 1459593526 installed <13>Apr 14 03:36:12 rpmi: python-modules-sqlite3-2.7.11-alt6.M80P.1 1527682470 installed <13>Apr 14 03:36:12 rpmi: python-module-SQLAlchemy-1.2.15-alt1 p8+223214.600.2.1 1551354313 installed <13>Apr 14 03:36:12 rpmi: python-module-sip-devel-4.19.3-alt0.M80P.1 1507188516 installed <13>Apr 14 03:36:12 rpmi: boost-python-devel-1:1.58.0-alt4 1463059984 installed <13>Apr 14 03:36:15 rpmi: texlive-fonts-recommended-2008.0-alt0.15 1300007455 installed <13>Apr 14 03:36:15 rpmi: python-module-setuptools-1:18.5-alt0.M80P.1 1497527461 installed <13>Apr 14 03:36:15 rpmi: python-module-numpy-1:1.12.1-alt0.M80P.1 1496160663 installed <13>Apr 14 03:36:15 rpmi: python-module-jinja2-2.9-alt1.dev.git20150726.1.1.1 1460400640 installed <13>Apr 14 03:36:15 rpmi: python-module-zope-3.3.0-alt8.4 1458261152 installed <13>Apr 14 03:36:15 rpmi: python-module-tornado-4.2.1-alt2.M80P.1 1496088637 installed <13>Apr 14 03:36:16 rpmi: python-module-babel-1:2.3.4-alt0.M80P.1 1480881327 installed <13>Apr 14 03:36:16 rpmi: scons-3.0.1-alt0.M80P.1 p8.217801.200 1547224686 installed <13>Apr 14 03:36:16 rpmi: python-module-jinja2-tests-2.9-alt1.dev.git20150726.1.1.1 1460400640 installed <13>Apr 14 03:36:16 rpmi: python-module-pytest-3.2.1-alt0.M80P.1 1503499784 installed <13>Apr 14 03:36:16 rpmi: python-module-numpy-testing-1:1.12.1-alt0.M80P.1 1496160663 installed <13>Apr 14 03:36:16 rpmi: python-module-zope.interface-4.1.3-alt1.dev0.git20150601.4 1459629874 installed <13>Apr 14 03:36:16 rpmi: python-module-cssselect-0.9.1-alt1.1 1457858257 installed <13>Apr 14 03:36:25 rpmi: texlive-latex-recommended-2008.0-alt0.15 1300007455 installed <13>Apr 14 03:36:25 rpmi: texlive-generic-recommended-2008.0-alt0.15 1300007455 installed <13>Apr 14 03:36:26 rpmi: texlive-math-extra-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:26 rpmi: python-module-lxml-4.0.0-alt0.M80P.1 1507163741 installed <13>Apr 14 03:36:26 rpmi: python-module-docutils-0.13-alt4.git20150716.1.1 1460400317 installed <13>Apr 14 03:36:26 rpmi: python-module-matplotlib-2.0.0-alt3.M80P.1 1498628280 installed <13>Apr 14 03:36:27 rpmi: texlive-lang-french-2008.0-alt0.14 1248958512 installed <13>Apr 14 03:36:27 rpmi: texlive-extra-utils-2008.0-alt0.15.6 1449446882 installed <13>Apr 14 03:36:27 rpmi: texlive-lang-german-2008.0-alt0.14 1248958512 installed <13>Apr 14 03:36:27 rpmi: texlive-lang-cyrillic-2008.0-alt0.14 1248958512 installed <13>Apr 14 03:36:27 rpmi: jadetex-3.13-alt4 1257583364 installed <13>Apr 14 03:36:27 rpmi: python-module-matplotlib-gtk3-2.0.0-alt3.M80P.1 1498628280 installed <13>Apr 14 03:36:27 rpmi: python-module-matplotlib-cairo-2.0.0-alt3.M80P.1 1498628280 installed <13>Apr 14 03:36:27 rpmi: python-module-html5lib-1:0.999999999-alt1.M80P.2 1507185603 installed <13>Apr 14 03:36:27 rpmi: docbook-utils-print-0.6.14-alt4 1285177233 installed <13>Apr 14 03:36:27 rpmi: texmf-latex-xcolor-2.06-alt3 1244802289 installed <13>Apr 14 03:36:28 rpmi: texmf-pgf-3.0.1-alt1 1439012888 installed <13>Apr 14 03:36:34 rpmi: texlive-fonts-extra-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:44 rpmi: texlive-pstricks-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:44 rpmi: python-module-Pygments-2.2.0-alt1.M80P.2 p8.214223.100 1538848792 installed <13>Apr 14 03:36:44 rpmi: python-module-alabaster-0.7.6-alt1.git20150703.1 1457857919 installed <13>Apr 14 03:36:44 rpmi: python-module-sphinx-1:1.4-alt8.a0.git20150813 1460726255 installed <13>Apr 14 03:36:44 rpmi: python-module-numpydoc-1:0.6-alt1.dev.git20150712 1440938301 installed <13>Apr 14 03:36:44 rpmi: texlive-games-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:44 rpmi: texmf-latex-obsolete-0.1-alt1 1244748792 installed <13>Apr 14 03:36:45 rpmi: texlive-lang-arab-2008.0-alt0.14 1248958512 installed <13>Apr 14 03:36:45 rpmi: texlive-xetex-2008.0-alt0.15.6 1449446882 installed <13>Apr 14 03:36:45 rpmi: texmf-latex-beamer-3.36-alt4 1451249538 installed <13>Apr 14 03:36:46 rpmi: libnumpy-devel-1:1.12.1-alt0.M80P.1 1496160663 installed <13>Apr 14 03:36:47 rpmi: texlive-publishers-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:48 rpmi: texlive-pictures-2008.0-alt0.15 1300007455 installed <13>Apr 14 03:36:49 rpmi: texlive-science-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:50 rpmi: texlive-humanities-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:50 rpmi: texlive-bibtex-extra-2008.0-alt0.16 1300008623 installed <13>Apr 14 03:36:57 rpmi: texlive-latex-extra-2008.0-alt0.16 1300008623 installed Installing avogadro-1.2.0-alt3.M80P.1.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.49801 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf avogadro-1.2.0 + echo 'Source #0 (avogadro-1.2.0.tar):' Source #0 (avogadro-1.2.0.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/avogadro-1.2.0.tar + cd avogadro-1.2.0 + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #1 (avogadro-1.0.3-mkspecs-dir.patch):' Patch #1 (avogadro-1.0.3-mkspecs-dir.patch): + /usr/bin/patch -p1 patching file CMakeLists.txt Hunk #1 succeeded at 552 with fuzz 2 (offset 61 lines). + echo 'Patch #2 (avogadro-1.0.3-no-strip.patch):' Patch #2 (avogadro-1.0.3-no-strip.patch): + /usr/bin/patch -p1 patching file CMakeLists.txt Hunk #1 succeeded at 114 with fuzz 1 (offset 16 lines). + echo 'Patch #3 (avogadro-1.1.1-pkgconfig_eigen.patch):' Patch #3 (avogadro-1.1.1-pkgconfig_eigen.patch): + /usr/bin/patch -p1 patching file avogadro.pc.in + echo 'Patch #4 (avogadro-1.1.1-qt.patch):' Patch #4 (avogadro-1.1.1-qt.patch): + /usr/bin/patch -p1 patching file libavogadro/tests/moleculefiletest.cpp Hunk #1 succeeded at 153 (offset 2 lines). Hunk #2 succeeded at 173 (offset 2 lines). + echo 'Patch #5 (avogadro-1.1.1-python_openbabel.patch):' Patch #5 (avogadro-1.1.1-python_openbabel.patch): + /usr/bin/patch -p1 patching file libavogadro/src/python/CMakeLists.txt + echo 'Patch #6 (avogadro-1.1.1-Q_MOC_RUN.patch):' Patch #6 (avogadro-1.1.1-Q_MOC_RUN.patch): + /usr/bin/patch -p1 patching file libavogadro/src/pythonengine_p.h Hunk #1 succeeded at 31 (offset 4 lines). patching file libavogadro/src/pythonextension_p.h Hunk #1 succeeded at 33 (offset 4 lines). patching file libavogadro/src/pythoninterpreter.h patching file libavogadro/src/pythonscript.h patching file libavogadro/src/pythontool_p.h Hunk #1 succeeded at 31 (offset 4 lines). + echo 'Patch #7 (avogadro-1.2.0-libmsymfloat.patch):' Patch #7 (avogadro-1.2.0-libmsymfloat.patch): + /usr/bin/patch -p1 patching file libavogadro/src/extensions/symmetry/libmsym/src/orbital.c + echo 'Patch #8 (avogadro_eigen3.patch):' Patch #8 (avogadro_eigen3.patch): + /usr/bin/patch -p1 patching file avogadro/src/CMakeLists.txt patching file avogadro/src/mainwindow.cpp patching file CMakeLists.txt patching file libavogadro/src/camera.cpp patching file libavogadro/src/camera.h patching file libavogadro/src/CMakeLists.txt patching file libavogadro/src/engines/wireengine.cpp patching file libavogadro/src/extensions/crystallography/crystallographyextension.cpp patching file libavogadro/src/extensions/crystallography/ui/ceviewoptionswidget.cpp patching file libavogadro/src/extensions/orca/orcaanalysedialog.cpp patching file libavogadro/src/extensions/orca/orcainputdialog.cpp patching file libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp patching file libavogadro/src/extensions/qtaim/qtaimwavefunctionevaluator.cpp patching file libavogadro/src/extensions/surfaces/openqube/CMakeLists.txt patching file libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp patching file libavogadro/src/extensions/surfaces/openqube/slaterset.cpp patching file libavogadro/src/glpainter_p.cpp patching file libavogadro/src/glwidget.cpp patching file libavogadro/src/leastsquares.h patching file libavogadro/src/molecule.cpp patching file libavogadro/src/navigate.cpp patching file libavogadro/src/python/camera.cpp patching file libavogadro/src/python/eigen.cpp patching file libavogadro/src/tools/bondcentrictool.cpp patching file libavogadro/src/tools/manipulatetool.cpp patching file libavogadro/src/tools/navigatetool.cpp patching file libavogadro/src/tools/skeletontree.cpp patching file libavogadro/src/tools/skeletontree.h patching file libavogadro/tests/CMakeLists.txt + echo 'Patch #100 (avogadro-1.1.0-alt-config.patch):' Patch #100 (avogadro-1.1.0-alt-config.patch): + /usr/bin/patch -p1 patching file cmake/modules/AvogadroConfig.cmake.in patching file CMakeLists.txt Hunk #1 succeeded at 335 (offset 7 lines). + echo 'Patch #101 (avogadro-1.0.3-alt-desktopfile.patch):' Patch #101 (avogadro-1.0.3-alt-desktopfile.patch): + /usr/bin/patch -p1 patching file avogadro/src/avogadro.desktop Hunk #1 succeeded at 66 (offset 60 lines). + echo 'Patch #102 (avogadro-1.1.1-alt-fix-gcc6-version.patch):' Patch #102 (avogadro-1.1.1-alt-fix-gcc6-version.patch): + /usr/bin/patch -p1 patching file CMakeLists.txt + rm -f cmake/modules/FindPythonLibs.cmake + sed -i 's|\${PYTHON_LIB_PATH}|/usr/lib64/python2.7/site-packages|g' libavogadro/src/python/CMakeLists.txt + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.49801 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd avogadro-1.2.0 + mkdir -p BUILD-x86_64-alt-linux + __kde4_cmake -DINCLUDE_INSTALL_DIR=/usr/include -DSOUND_INSTALL_DIR=/usr/share/sounds -DAUTOSTART_INSTALL_DIR=/etc/xdg/autostart -DXDG_DIRECTORY_INSTALL_DIR=/usr/share/desktop-directories -DXDG_APPS_INSTALL_DIR=/usr/share/applications -DENABLE_TESTS:BOOL=OFF -DENABLE_RPATH:BOOL=OFF -DENABLE_GLSL:BOOL=ON -DPython_ADDITIONAL_VERSIONS=2.7 -DENABLE_PYTHON:BOOL=ON -DENABLE_VERSIONED_PLUGIN_DIR:BOOL=OFF -DINSTALL_CMAKE_DIR:PATH=/usr/lib64/libmsym/cmake + export PATH=/usr/lib/kde4/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games + PATH=/usr/lib/kde4/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games + pushd BUILD-x86_64-alt-linux ~/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux ~/RPM/BUILD/avogadro-1.2.0 + cmake .. -DCMAKE_SKIP_RPATH:BOOL=yes -DCMAKE_BUILD_TYPE=Release '-DCMAKE_C_FLAGS:STRING=-pipe -Wall -g -O2 -DPIC -fPIC -I/usr/include/eigen2' '-DCMAKE_CXX_FLAGS:STRING=-pipe -Wall -g -O2 -DPIC -fPIC -I/usr/include/eigen2' '-DCMAKE_EXE_LINKER_FLAGS:STRING=-L/usr/lib64/kde4link -L/usr/lib64/kde4/devel' '-DCMAKE_MODULE_LINKER_FLAGS:STRING=-L/usr/lib64/kde4link -L/usr/lib64/kde4/devel' '-DCMAKE_SHARED_LINKER_FLAGS:STRING=-L/usr/lib64/kde4link -L/usr/lib64/kde4/devel' '-DCMAKE_LIBRARY_PATH:LIST=/usr/lib64/kde4/devel;/usr/lib64/kde4link;/usr/lib64;/lib64' -DLIB_DESTINATION=lib64 -DLIB_SUFFIX=64 -DCMAKE_INSTALL_PREFIX=/usr -DBIN_INSTALL_DIR=/usr/bin -DSBIN_INSTALL_DIR=/usr/sbin -DICON_INSTALL_DIR=/usr/share/icons -DXDG_APPS_INSTALL_DIR=/usr/share/applications/kde4 -DXDG_DIRECTORY_INSTALL_DIR=/usr/share/desktop-directories -DLIB_INSTALL_DIR=/usr/lib64 -DLIBEXEC_INSTALL_DIR=/usr/lib64/kde4/libexec -DINCLUDE_INSTALL_DIR=/usr/include/kde4 -DKDE4_INCLUDE_INSTALL_DIR=/usr/include/kde4 -DSYSCONF_INSTALL_DIR=/etc -DDATA_INSTALL_DIR=/usr/share/kde4/apps -DCONFIG_INSTALL_DIR=/usr/share/kde4/config -DKCFG_INSTALL_DIR=/usr/share/kde4/config.kcfg -DHTML_INSTALL_DIR=/usr/share/kde4/doc/HTML -DAPPLNK_INSTALL_DIR=/usr/share/applnk -DLOCALE_INSTALL_DIR=/usr/share/kde4/locale -DSERVICES_INSTALL_DIR=/usr/share/kde4/services -DSERVICETYPES_INSTALL_DIR=/usr/share/kde4/servicetypes -DKCONF_UPDATE_INSTALL_DIR=/usr/share/kde4/apps/kconf_update -DXDG_MIME_INSTALL_DIR=/usr/share/mime/packages -DAUTOSTART_INSTALL_DIR=/usr/share/kde4/autostart -DSOUND_INSTALL_DIR=/usr/share/kde4/sounds -DTEMPLATES_INSTALL_DIR=/usr/share/kde4/templates -DWALLPAPER_INSTALL_DIR=/usr/share/wallpapers -DDBUS_INTERFACES_INSTALL_DIR=/usr/share/dbus-1/interfaces -DDBUS_SERVICES_INSTALL_DIR=/usr/share/dbus-1/services -DDBUS_SYSTEM_SERVICES_INSTALL_DIR=/usr/share/dbus-1/system-services -DMAN_INSTALL_DIR=/usr/share/man -DINFO_INSTALL_DIR=/usr/share/info -DINSTALL_PYTHON_FILES_IN_PYTHON_PREFIX:BOOL=yes -DINCLUDE_INSTALL_DIR=/usr/include -DSOUND_INSTALL_DIR=/usr/share/sounds -DAUTOSTART_INSTALL_DIR=/etc/xdg/autostart -DXDG_DIRECTORY_INSTALL_DIR=/usr/share/desktop-directories -DXDG_APPS_INSTALL_DIR=/usr/share/applications -DENABLE_TESTS:BOOL=OFF -DENABLE_RPATH:BOOL=OFF -DENABLE_GLSL:BOOL=ON -DPython_ADDITIONAL_VERSIONS=2.7 -DENABLE_PYTHON:BOOL=ON -DENABLE_VERSIONED_PLUGIN_DIR:BOOL=OFF -DINSTALL_CMAKE_DIR:PATH=/usr/lib64/libmsym/cmake -- The C compiler identification is GNU 5.3.1 -- The CXX compiler identification is GNU 5.3.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- The build type is Release -- Performing Test HAVE_NO_RTTI -- Performing Test HAVE_NO_RTTI - Success -- Performing Test HAVE_RTTI -- Performing Test HAVE_RTTI - Success -- Performing Test HAVE_GCC_VISIBILITY -- Performing Test HAVE_GCC_VISIBILITY - Success -- Performing Test COMPILES_WITHOUT_FPERMISSIVE -- Performing Test COMPILES_WITHOUT_FPERMISSIVE - Failed -- Looking for Q_WS_X11 -- Looking for Q_WS_X11 - found -- Looking for Q_WS_WIN -- Looking for Q_WS_WIN - not found -- Looking for Q_WS_QWS -- Looking for Q_WS_QWS - not found -- Looking for Q_WS_MAC -- Looking for Q_WS_MAC - not found -- Found Qt4: /usr/bin/qmake-qt4 (found suitable version "4.8.7", minimum required is "4.6.0") -- Found OpenGL: /usr/lib64/libGL.so -- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so -- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Looking for IceConnectionNumber in ICE -- Looking for IceConnectionNumber in ICE - found -- Found X11: /usr/lib64/libX11.so -- Found lupdate: /usr/bin/lupdate-qt4 -- Found lrelease: /usr/bin/lrelease-qt4 -- Found lconvert: /usr/bin/lconvert-qt4 -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Found ZLIB: /usr/lib64/libz.so (found version "1.2.8") -- Found PkgConfig: /usr/bin/pkg-config (found version "0.25") -- Checking for module 'openbabel-2.0>=2.3.0' -- Found openbabel-2.0, version 2.3.2 -- Found OpenBabel 2.3 or later: openbabel -- Found OpenBabel2 executable: /usr/bin/babel -- Found Git revision is: -- Building released version. -- Searching for python dependencies... -- [1/5] Boost Python -- Boost version: 1.58.0 -- Found the following Boost libraries: -- python -- Boost Python found... -- [2/5] Python Libraries -- Found PythonLibs: /usr/lib64/libpython2.7.so (found version "2.7.11") -- [3/5] Python Interpreter -- Found PythonInterp: /usr/bin/python2.7 (found version "2.7.11") -- [4/5] Numpy Module -- Numpy headers found -- [5/5] SIP Module -- SIP version 267011 found -- Found SIP: /usr/include/python2.7 -- All python dependencies found - Python support enabled -- GLEW found and GLSL support enabled -- Threaded OpenGL rendering not enabled -- Setting new boost python libraries failed to create symbolic link '/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro//usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/config.h': No such file or directory -- Enabled python terminal -- Found Qt4: /usr/bin/qmake-qt4 (found suitable version "4.8.7", minimum required is "4.6") -- Linking in static plugins: bsdyengine;navigatetool;elementcolor -- Python site-packages directory: /usr/lib64/python2.7/site-packages -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Configuring done CMake Warning (dev) in libavogadro/src/CMakeLists.txt: Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link interface. Run "cmake --help-policy CMP0022" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Target "avogadro" has an INTERFACE_LINK_LIBRARIES property which differs from its LINK_INTERFACE_LIBRARIES properties. INTERFACE_LINK_LIBRARIES: openbabel;/usr/lib64/libQtOpenGL.so;/usr/lib64/libQtGui.so;/usr/lib64/libQtCore.so;/usr/lib64/libGLU.so;/usr/lib64/libGL.so;/usr/lib64/libGLEW.so;/usr/lib64/libpython2.7.so;/usr/lib64/libboost_python-mt.so;bsdyengine;navigatetool;elementcolor LINK_INTERFACE_LIBRARIES: This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) in libavogadro/src/extensions/surfaces/openqube/CMakeLists.txt: Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link interface. Run "cmake --help-policy CMP0022" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Target "OpenQube" has an INTERFACE_LINK_LIBRARIES property which differs from its LINK_INTERFACE_LIBRARIES properties. INTERFACE_LINK_LIBRARIES: $<$>:/usr/lib64/libQtCore.so>;$<$:/usr/lib64/libQtCore.so>;$<$>:/usr/lib64/libQtGui.so>;$<$:/usr/lib64/libQtGui.so> LINK_INTERFACE_LIBRARIES: This warning is for project developers. Use -Wno-dev to suppress it. -- Generating done CMake Warning: Manually-specified variables were not used by the project: APPLNK_INSTALL_DIR AUTOSTART_INSTALL_DIR CONFIG_INSTALL_DIR DATA_INSTALL_DIR DBUS_INTERFACES_INSTALL_DIR DBUS_SERVICES_INSTALL_DIR DBUS_SYSTEM_SERVICES_INSTALL_DIR HTML_INSTALL_DIR ICON_INSTALL_DIR INFO_INSTALL_DIR INSTALL_PYTHON_FILES_IN_PYTHON_PREFIX KCFG_INSTALL_DIR KCONF_UPDATE_INSTALL_DIR KDE4_INCLUDE_INSTALL_DIR LIBEXEC_INSTALL_DIR LIB_DESTINATION LOCALE_INSTALL_DIR MAN_INSTALL_DIR SBIN_INSTALL_DIR SERVICES_INSTALL_DIR SERVICETYPES_INSTALL_DIR SOUND_INSTALL_DIR SYSCONF_INSTALL_DIR TEMPLATES_INSTALL_DIR WALLPAPER_INSTALL_DIR XDG_MIME_INSTALL_DIR -- Build files have been written to: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux + popd ~/RPM/BUILD/avogadro-1.2.0 + __kde4_make + pushd BUILD-x86_64-alt-linux ~/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux ~/RPM/BUILD/avogadro-1.2.0 + '[' -n '' ']' + NPROCS=8 + make -j8 make: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[1]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 0%] Generating moc_elementcolor.cxx make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 0%] Generating moc_bsdyengine.cxx make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 0%] Generating moc_navigatetool.cxx [ 0%] Generating ui_bsdysettingswidget.h [ 0%] Generating ui_navigatesettingswidget.h [ 0%] Generating qrc_navigatetool.cxx make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' Scanning dependencies of target spglib Scanning dependencies of target msym make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 0%] Generating moc_slaterset.cxx [ 0%] Generating moc_basisset.cxx make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' Scanning dependencies of target tubegen [ 0%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/cell.c.o make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 0%] Building C object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Bitmap.c.o [ 0%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/character_table.c.o In file included from /usr/include/stdlib.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target elementcolor make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 0%] Generating moc_gaussianset.cxx [ 1%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/debug.c.o [ 1%] Building CXX object libavogadro/src/colors/CMakeFiles/elementcolor.dir/elementcolor.cpp.o Scanning dependencies of target bsdyengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/elementcolor.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/elementcolor.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 1%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/hall_symbol.c.o make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.c:14:0: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:299:50: warning: 'CnhIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnhIrrep[] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:303:50: warning: 'CnvIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnvIrrep[] = { ^ [ 1%] Building CXX object libavogadro/src/engines/CMakeFiles/bsdyengine.dir/bsdyengine.cpp.o [ 1%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/lattice.c.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/bsdyengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/bsdyengine.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 1%] Building C object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Core3DMath.c.o Scanning dependencies of target navigatetool make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' Scanning dependencies of target OpenQube make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 2%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/context.c.o make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 2%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/atom.cpp.o In file included from /usr/include/stdlib.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 2%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/navigatetool.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/navigatetool.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/navigatetool.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/bits/stl_algobase.h:59, from /usr/include/c++/5/vector:60, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/atom.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/atom.cpp:17: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.h:16, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.c:16: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:20:20: warning: 'IrreducibleRepresentationName' defined but not used [-Wunused-variable] static const char *IrreducibleRepresentationName[] = ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:299:50: warning: 'CnhIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnhIrrep[] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:303:50: warning: 'CnvIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnvIrrep[] = { ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.c:16: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:21:15: warning: 'spolynomial' defined but not used [-Wunused-variable] static double spolynomial [][1] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:25:15: warning: 'ppolynomial' defined but not used [-Wunused-variable] static double ppolynomial [][3] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:34:15: warning: 'dpolynomial' defined but not used [-Wunused-variable] static double dpolynomial [][9] = { ^ [ 2%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/mathfunc.c.o [ 2%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/pointgroup.c.o [ 2%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/primitive.c.o [ 2%] Building C object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/eprintf.c.o [ 2%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/ANSR.cpp.o [ 2%] Building CXX object libavogadro/src/colors/CMakeFiles/elementcolor.dir/moc_elementcolor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/../../../../libavogadro/src/colors/elementcolor.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/moc_elementcolor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 2%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/refinement.c.o [ 2%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/elements.c.o In file included from /usr/include/string.h:25:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/elements.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 2%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/Cell.cpp.o [ 2%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/equivalence_set.c.o In file included from /usr/include/stdlib.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/equivalence_set.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/equivalence_set.c: In function 'copyEquivalenceSets': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/equivalence_set.c:38:1: warning: label 'err' defined but not used [-Wunused-label] err: ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/equivalence_set.h:16, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/equivalence_set.c:15: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/equivalence_set.c: At top level: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:20:20: warning: 'IrreducibleRepresentationName' defined but not used [-Wunused-variable] static const char *IrreducibleRepresentationName[] = ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:299:50: warning: 'CnhIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnhIrrep[] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:303:50: warning: 'CnvIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnvIrrep[] = { ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/equivalence_set.c:17: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:21:15: warning: 'spolynomial' defined but not used [-Wunused-variable] static double spolynomial [][1] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:25:15: warning: 'ppolynomial' defined but not used [-Wunused-variable] static double ppolynomial [][3] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:34:15: warning: 'dpolynomial' defined but not used [-Wunused-variable] static double dpolynomial [][9] = { ^ [ 2%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/spacegroup.c.o [ 2%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/spg_database.c.o [ 2%] Linking CXX static library elementcolor.a make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 2%] Built target elementcolor [ 2%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/spglib.c.o [ 3%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/symmetry.c.o [ 3%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/kpoint.c.o [ 4%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/CrystalCell.cpp.o [ 4%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/geometry.c.o In file included from /usr/include/math.h:26:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/geometry.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 4%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/basisset.cpp.o [ 4%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/linalg.c.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/atom.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/basisset.cpp:17: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/stdio.h:27:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/linalg.c:12: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 4%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/site_symmetry.c.o [ 4%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/sitesym_database.c.o [ 4%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/spglib_f.c.o [ 4%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/spin.c.o [ 4%] Building C object libavogadro/src/extensions/crystallography/spglib/CMakeFiles/spglib.dir/tetrahedron_method.c.o [ 4%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/basissetloader.cpp.o [ 4%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/cube.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/bits/stl_algobase.h:59, from /usr/include/c++/5/vector:60, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/cube.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/cube.cpp:17: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/atom.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gaussianset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/basissetloader.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 4%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/diamond.cpp.o [ 4%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/msym.c.o In file included from /usr/include/stdio.h:27:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/msym.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 4%] Linking C static library libspglib.a In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.h:16, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/msym.c:16: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:20:20: warning: 'IrreducibleRepresentationName' defined but not used [-Wunused-variable] static const char *IrreducibleRepresentationName[] = ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:299:50: warning: 'CnhIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnhIrrep[] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:303:50: warning: 'CnvIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnvIrrep[] = { ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/msym.c:16: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:21:15: warning: 'spolynomial' defined but not used [-Wunused-variable] static double spolynomial [][1] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:25:15: warning: 'ppolynomial' defined but not used [-Wunused-variable] static double ppolynomial [][3] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:34:15: warning: 'dpolynomial' defined but not used [-Wunused-variable] static double dpolynomial [][9] = { ^ [ 4%] Built target spglib [ 4%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/msym_error.c.o In file included from /usr/include/stdio.h:27:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/msym_error.c:12: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 4%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/fcc.cpp.o [ 4%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/orbital.c.o In file included from /usr/include/stdlib.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.c:18: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:20:20: warning: 'IrreducibleRepresentationName' defined but not used [-Wunused-variable] static const char *IrreducibleRepresentationName[] = ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:299:50: warning: 'CnhIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnhIrrep[] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:303:50: warning: 'CnvIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnvIrrep[] = { ^ [ 4%] Building CXX object libavogadro/src/engines/CMakeFiles/bsdyengine.dir/moc_bsdyengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/bsdyengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_bsdyengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 4%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/graphite.cpp.o [ 4%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/eyecandy.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/eyecandy.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/eyecandy.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 4%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/permutation.c.o [ 4%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/TubeGen.cpp.o In file included from /usr/include/stdlib.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/permutation.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/permutation.c: In function 'findPermutationSubgroups': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/permutation.c:183:1: warning: label 'err' defined but not used [-Wunused-label] err: ^ [ 5%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/point_group.c.o [ 5%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/gamessukout.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/atom.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gaussianset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gamessukout.cpp:17: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/math.h:26:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.c:12: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 5%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/symmetrize.c.o In file included from /usr/include/stdlib.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetrize.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetrize.c: In function 'symmetrizeTranslation': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetrize.c:222:1: warning: label 'err' defined but not used [-Wunused-label] err: ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetrize.h:17, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetrize.c:16: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetrize.c: At top level: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:20:20: warning: 'IrreducibleRepresentationName' defined but not used [-Wunused-variable] static const char *IrreducibleRepresentationName[] = ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:299:50: warning: 'CnhIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnhIrrep[] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:303:50: warning: 'CnvIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnvIrrep[] = { ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetrize.c:17:0: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:21:15: warning: 'spolynomial' defined but not used [-Wunused-variable] static double spolynomial [][1] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:25:15: warning: 'ppolynomial' defined but not used [-Wunused-variable] static double ppolynomial [][3] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:34:15: warning: 'dpolynomial' defined but not used [-Wunused-variable] static double dpolynomial [][9] = { ^ [ 5%] Building CXX object libavogadro/src/extensions/swcntbuilder/tubegen/CMakeFiles/tubegen.dir/TubuleBasis.cpp.o /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.c: In function 'findPointGroup': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.c:454:1: warning: label 'err' defined but not used [-Wunused-label] err: ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.c:19: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.c: At top level: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:20:20: warning: 'IrreducibleRepresentationName' defined but not used [-Wunused-variable] static const char *IrreducibleRepresentationName[] = ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:299:50: warning: 'CnhIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnhIrrep[] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:303:50: warning: 'CnvIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnvIrrep[] = { ^ [ 5%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/symmetry.c.o In file included from /usr/include/stdio.h:27:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symop.h:16, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.h:15, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c: In function 'findSymmetryPlanarRegular': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c:196:110: warning: variable 'split' set but not used [-Wunused-but-set-variable] int sigma_h = vzero(cm,thresholds->zero), order = es->length, prim = 2, div_len, even, inversion, n = 0, split = 0; ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c: In function 'findSymmetrySymmetricPolyhedron': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c:378:71: warning: variable 'theta_sigma' set but not used [-Wunused-but-set-variable] double v0[3], v0_proj[3], v_init[3], dot0, theta, theta_C2 = 0.0, theta_sigma = 0.0; ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c: In function 'findSymmetrySpherical': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c:636:1: warning: label 'err' defined but not used [-Wunused-label] err: ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c: In function 'findSymmetryCubic': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c:650:122: warning: variable 'ecb' set but not used [-Wunused-but-set-variable] int found = 0, nsigma = 0, esigma = 0, inversion = 0, nc[6] = {0,0,0,0,0,0}, ec[6] = {0,0,0,0,0,0}, *ncb = &nsigma, *ecb = &esigma,*nc3b = &nsigma; ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c: In function 'filterSymmetryOperations': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c:1204:1: warning: label 'err' defined but not used [-Wunused-label] err: ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/equivalence_set.h:16, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c:16: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symmetry.c: At top level: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:20:20: warning: 'IrreducibleRepresentationName' defined but not used [-Wunused-variable] static const char *IrreducibleRepresentationName[] = ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:299:50: warning: 'CnhIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnhIrrep[] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:303:50: warning: 'CnvIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnvIrrep[] = { ^ [ 5%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/gamessus.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/QIODevice:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gamessus.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gamessus.cpp:17: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 5%] Building C object libavogadro/src/extensions/symmetry/libmsym/CMakeFiles/msym.dir/src/symop.c.o In file included from /usr/include/math.h:26:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symop.c:11: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/point_group.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.h:16, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symop.c:14: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:20:20: warning: 'IrreducibleRepresentationName' defined but not used [-Wunused-variable] static const char *IrreducibleRepresentationName[] = ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:299:50: warning: 'CnhIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnhIrrep[] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/character_table.h:303:50: warning: 'CnvIrrep' defined but not used [-Wunused-variable] static const enum IrreducibleRepresentationEnum *CnvIrrep[] = { ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/context.h:17:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/symop.c:14: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:21:15: warning: 'spolynomial' defined but not used [-Wunused-variable] static double spolynomial [][1] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:25:15: warning: 'ppolynomial' defined but not used [-Wunused-variable] static double ppolynomial [][3] = { ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/libmsym/src/orbital.h:34:15: warning: 'dpolynomial' defined but not used [-Wunused-variable] static double dpolynomial [][9] = { ^ [ 6%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/moc_navigatetool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/navigatetool.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_navigatetool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 6%] Linking C static library libmsym.a make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 6%] Built target msym [ 6%] Building CXX object libavogadro/src/tools/CMakeFiles/navigatetool.dir/qrc_navigatetool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/qrc_navigatetool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 7%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/orca.cpp.o [ 7%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/gaussianfchk.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qalgorithms.h:45, from /usr/include/qt4/QtCore/qstringlist.h:45, from /usr/include/qt4/QtCore/QStringList:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/orca.h:20, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/orca.cpp:17: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/QIODevice:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gaussianfchk.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gaussianfchk.cpp:17: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/bsdyengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_bsdyengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 7%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/gaussianset.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/atom.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/molecule.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gaussianset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/gaussianset.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 7%] Linking CXX static library bsdyengine.a make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 7%] Built target bsdyengine [ 7%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/molden.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/molden.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp:17: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp: In member function 'void OpenQube::MoldenFile::unnormalizeBasis()': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/molden.cpp:259:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i=0;i::max(); ^ [ 7%] Linking CXX static library libtubegen.a make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 7%] Built target tubegen [ 7%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_basisset.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/atom.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/molecule.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/moc_basisset.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 7%] Linking CXX static library navigatetool.a make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 7%] Built target navigatetool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 7%] Generating qrc_pythontool.cxx [ 7%] Generating moc_animation.cxx [ 7%] Generating moc_atom.cxx [ 7%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_gaussianset.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/atom.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/molecule.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/gaussianset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/moc_gaussianset.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 7%] Generating moc_bond.cxx [ 8%] Generating moc_color.cxx [ 8%] Generating moc_colorbutton.cxx [ 8%] Generating moc_cube.cxx [ 8%] Generating moc_dockextension.cxx [ 8%] Generating moc_dockwidget.cxx [ 8%] Generating moc_elementdetail_p.cxx [ 8%] Generating moc_elementtranslator.cxx [ 8%] Generating moc_engine.cxx [ 8%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/OpenQube.dir/moc_slaterset.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/atom.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/molecule.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/basisset.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/../../../../../../libavogadro/src/extensions/surfaces/openqube/slaterset.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/openqube/moc_slaterset.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 8%] Generating moc_extension.cxx [ 9%] Generating moc_fragment.cxx [ 9%] Generating moc_glwidget.cxx [ 9%] Generating moc_mesh.cxx [ 9%] Generating moc_meshgenerator.cxx In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/fragment.h:28:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/orca.cpp:25: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h: At global scope: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 9%] Generating moc_molecule.cxx [ 9%] Generating moc_moleculefile.cxx [ 9%] Generating moc_periodictablescene_p.cxx [ 9%] Generating moc_periodictableview.cxx [ 9%] Generating moc_plotwidget.cxx [ 9%] Generating moc_plugin.cxx [ 10%] Generating moc_pluginmanager.cxx [ 10%] Generating moc_primitive.cxx [ 10%] Generating moc_protein.cxx [ 10%] Generating moc_readfilethread_p.cxx [ 10%] Generating moc_residue.cxx [ 10%] Generating moc_textmatrixeditor.cxx [ 10%] Generating moc_tool.cxx [ 10%] Generating moc_toolgroup.cxx [ 10%] Generating moc_zmatrix.cxx [ 11%] Generating moc_pythonerror.cxx [ 11%] Generating moc_pythonengine_p.cxx [ 11%] Generating moc_pythonextension_p.cxx [ 11%] Generating moc_pythontool_p.cxx [ 11%] Generating libavogadro_ar.qm [ 11%] Generating libavogadro_bg.qm [ 11%] Generating libavogadro_bs.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 11%] Generating libavogadro_ca.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 11%] Generating libavogadro_ca@valencia.qm [ 11%] Generating libavogadro_cs.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 12%] Generating libavogadro_da.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 12%] Generating libavogadro_de.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 12%] Generating libavogadro_el.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 12%] Generating libavogadro_en_AU.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 12%] Generating libavogadro_en_CA.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 12%] Generating libavogadro_en_GB.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 12%] Generating libavogadro_es.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 12%] Generating libavogadro_et.qm [ 12%] Generating libavogadro_eu.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 12%] Generating libavogadro_fi.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 13%] Generating libavogadro_fr.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 13%] Generating libavogadro_gl.qm [ 13%] Generating libavogadro_hi.qm [ 13%] Generating libavogadro_he.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 13%] Generating libavogadro_hu.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 13%] Generating libavogadro_id.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 13%] Generating libavogadro_it.qm [ 13%] Generating libavogadro_ja.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 13%] Generating libavogadro_kn.qm [ 14%] Generating libavogadro_ko.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 14%] Generating libavogadro_ms.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 14%] Generating libavogadro_nb.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 14%] Generating libavogadro_nl.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 14%] Generating libavogadro_oc.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 14%] Generating libavogadro_pl.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 14%] Generating libavogadro_pt.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 14%] Generating libavogadro_pt_BR.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 14%] Generating libavogadro_ru.qm [ 14%] Generating libavogadro_sk.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 15%] Generating libavogadro_sl.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 15%] Generating libavogadro_sq.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 15%] Generating libavogadro_sr.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 15%] Generating libavogadro_sv.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 15%] Generating libavogadro_th.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 15%] Generating libavogadro_tr.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 15%] Generating libavogadro_ug.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 15%] Generating libavogadro_uk.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 15%] Generating libavogadro_vi.qm [ 16%] Generating libavogadro_zh_CN.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 16%] Generating libavogadro_zh_TW.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src'... [ 17%] Linking CXX shared library ../../../../../lib64/libavogadro_OpenQube.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 17%] Built target OpenQube make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' Scanning dependencies of target qube make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 17%] Building CXX object libavogadro/src/extensions/surfaces/openqube/CMakeFiles/qube.dir/qube.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/iostream:38, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/openqube/qube.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target avogadro make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/animation.cpp.o [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/camera.cpp.o [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/colorbutton.cpp.o [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/atom.cpp.o [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/color.cpp.o [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/cube.cpp.o [ 17%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/bond.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/cube.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/cube.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/atom.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/atom.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/color.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/color.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/animation.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/animation.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/camera.h:35, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/camera.cpp:28: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colorbutton.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colorbutton.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/bond.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/bond.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 17%] Linking CXX executable ../../../../../bin/qube [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/cylinder_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/cylinder_p.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/cylinder_p.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/dockextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/dockextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/dockextension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 18%] Built target qube [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/dockwidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/dockwidget.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/elementdetail_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtGui/qgraphicsitem.h:45, from /usr/include/qt4/QtGui/QGraphicsItem:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/elementdetail_p.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/elementdetail_p.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/elementitem_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtGui/qgraphicsitem.h:45, from /usr/include/qt4/QtGui/QGraphicsItem:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/elementitem_p.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/elementitem_p.cpp:28: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/elementtranslator.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/elementtranslator.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/elementtranslator.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/engine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engine.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/extension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 18%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/fragment.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/fragment.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/fragment.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/glhit.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/glhit.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/glhit.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/global.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/global.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/glpainter_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/glpainter_p.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/glpainter_p.cpp:31: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/glwidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/camera.h:35, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/glwidget.cpp:32: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/idlist.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/idlist.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/idlist.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/mesh.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/mesh.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/mesh.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/meshgenerator.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/meshgenerator.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/meshgenerator.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/molecule.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/molecule.cpp:28: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moleculefile.cpp.o In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/idlist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/idlist.cpp:25: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/moleculefile.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/moleculefile.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 19%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/navigate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/navigate.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/navigate.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/cube.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/meshgenerator.cpp:30: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/glpainter_p.cpp: In member function 'virtual void Avogadro::GLPainter::drawTriangle(const Vector3d&, const Vector3d&, const Vector3d&)': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/glpainter_p.cpp:575:27: warning: variable 'planeNormalVector' set but not used [-Wunused-but-set-variable] const Eigen::Vector3d planeNormalVector = d->widget->normalVector(); ^ [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/neighborlist.cpp.o [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/painter.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/painter.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/painter.cpp:28: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/neighborlist.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/neighborlist.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/molecule.cpp:39:0: /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/leastsquares.h: In instantiation of 'void Avogadro::fitHyperplane(int, VectorType**, HyperplaneType*, typename Eigen::NumTraits::Real*) [with VectorType = Eigen::Matrix; HyperplaneType = Eigen::Hyperplane; typename Eigen::NumTraits::Real = double]': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/molecule.cpp:1911:62: required from here /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/leastsquares.h:54:14: warning: variable 'remean' set but not used [-Wunused-but-set-variable] VectorType remean = VectorType::Zero(size); ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/painter.h:33:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/painter.cpp:28: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/periodictablescene_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qgraphicsscene.h:45, from /usr/include/qt4/QtGui/QGraphicsScene:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/periodictablescene_p.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/periodictablescene_p.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/periodictableview.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/periodictableview.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/periodictableview.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plotaxis.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qchar.h:45, from /usr/include/qt4/QtCore/qstring.h:45, from /usr/include/qt4/QtCore/QString:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plotaxis.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plotaxis.cpp:29: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plotobject.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qchar.h:45, from /usr/include/qt4/QtCore/qstring.h:45, from /usr/include/qt4/QtCore/QString:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plotobject.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plotobject.cpp:29: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plotpoint.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plotpoint.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plotpoint.cpp:29: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plotwidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qchar.h:45, from /usr/include/qt4/QtCore/qstring.h:45, from /usr/include/qt4/QtCore/QString:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plotaxis.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plotwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plotwidget.cpp:29: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/plugin.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/plugin.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 20%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pluginmanager.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pluginmanager.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pluginmanager.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/primitive.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/primitive.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/primitivelist.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/primitivelist.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/primitivelist.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/protein.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/protein.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/protein.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/primitivelist.cpp:25: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/readfilethread_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qthread.h:45, from /usr/include/qt4/QtCore/QThread:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/readfilethread_p.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/readfilethread_p.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/residue.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/fragment.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/residue.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/residue.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/sphere_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/sphere_p.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/sphere_p.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythonengine_p.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pluginmanager.cpp:32: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/textrenderer_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/textrenderer_p.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/textrenderer_p.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/textmatrixeditor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/textmatrixeditor.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/textmatrixeditor.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 21%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/tool.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tool.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/toolgroup.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/toolgroup.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/toolgroup.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/undosequence.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qundostack.h:45, from /usr/include/qt4/QtGui/QUndoCommand:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/undosequence.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/undosequence.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/zmatrix.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/zmatrix.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/zmatrix.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythoninterpreter.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythoninterpreter.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythoninterpreter.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythonscript.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythonscript.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythonscript.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythonerror.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/pythonerror.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythonerror.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythontool_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythontool_p.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythontool_p.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythonengine_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythonengine_p.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythonengine_p.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/pythonextension_p.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythonextension_p.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/pythonextension_p.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 22%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_animation.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/animation.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_animation.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_atom.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/atom.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_atom.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_bond.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/bond.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_bond.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_color.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/color.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_color.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/atom.h:31:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_atom.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_colorbutton.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/colorbutton.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_colorbutton.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/bond.h:31:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_bond.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_cube.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/cube.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_cube.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/cube.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_cube.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_dockextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/dockextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_dockextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_dockwidget.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_dockwidget.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_elementdetail_p.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtGui/qgraphicsitem.h:45, from /usr/include/qt4/QtGui/QGraphicsItem:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/elementdetail_p.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_elementdetail_p.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 23%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_elementtranslator.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/elementtranslator.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_elementtranslator.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_engine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/engine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_engine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_extension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_extension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_fragment.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/fragment.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_fragment.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_glwidget.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_glwidget.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_mesh.cxx.o [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_meshgenerator.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/mesh.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_mesh.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/meshgenerator.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_meshgenerator.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_molecule.cxx.o In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/fragment.h:28:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_fragment.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_molecule.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_engine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_moleculefile.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/moleculefile.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_moleculefile.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_periodictablescene_p.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qgraphicsscene.h:45, from /usr/include/qt4/QtGui/QGraphicsScene:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/periodictablescene_p.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_periodictablescene_p.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 24%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_periodictableview.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/periodictableview.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_periodictableview.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 25%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_plotwidget.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qchar.h:45, from /usr/include/qt4/QtCore/qstring.h:45, from /usr/include/qt4/QtCore/QString:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plotaxis.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/plotwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_plotwidget.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 25%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_plugin.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_plugin.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 25%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pluginmanager.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/pluginmanager.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_pluginmanager.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/mesh.h:30:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_mesh.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 25%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_primitive.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_primitive.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 25%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_protein.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/protein.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_protein.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 25%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_readfilethread_p.cxx.o [ 25%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_residue.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qthread.h:45, from /usr/include/qt4/QtCore/QThread:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/readfilethread_p.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_readfilethread_p.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/fragment.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/residue.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_residue.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 25%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_textmatrixeditor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/textmatrixeditor.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_textmatrixeditor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 25%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_tool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/tool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_tool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 26%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_toolgroup.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/toolgroup.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_toolgroup.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 26%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_zmatrix.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/zmatrix.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_zmatrix.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/fragment.h:28:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/residue.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_residue.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 26%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pythonengine_p.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/pythonengine_p.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_pythonengine_p.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 26%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pythonerror.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/pythonerror.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_pythonerror.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 26%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pythonextension_p.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/pythonextension_p.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_pythonextension_p.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 26%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/moc_pythontool_p.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/pythontool_p.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_pythontool_p.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 26%] Building CXX object libavogadro/src/CMakeFiles/avogadro.dir/qrc_pythontool.cxx.o In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_primitive.cxx:9:0: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/qrc_pythontool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/pythonextension_p.h:34:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_pythonextension_p.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/../../../libavogadro/src/pythonengine_p.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/moc_pythonengine_p.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 26%] Linking CXX shared library ../../lib64/libavogadro.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 26%] Built target avogadro make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 26%] Generating ui_ringsettingswidget.h [ 26%] Generating moc_forceengine.cxx [ 26%] Generating ui_sticksettingswidget.h [ 27%] Generating ui_spheresettingswidget.h [ 27%] Generating moc_cartoonengine.cxx [ 27%] Generating ui_cartoonsettingswidget.h [ 27%] Generating ui_axessettingswidget.h [ 27%] Generating moc_sphereengine.cxx [ 27%] Generating moc_axesengine.cxx make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 27%] Generating moc_stickengine.cxx [ 27%] Generating moc_ringengine.cxx [ 27%] Generating ui_hbondsettingswidget.h [ 27%] Generating ui_dipolesettingswidget.h [ 27%] Generating moc_hbondengine.cxx [ 27%] Generating moc_dipoleengine.cxx Scanning dependencies of target cartoonengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 27%] Building CXX object libavogadro/src/engines/CMakeFiles/cartoonengine.dir/cartoonengine.cpp.o Scanning dependencies of target stickengine In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/cartoonengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/cartoonengine.cpp:28: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 27%] Building CXX object libavogadro/src/engines/CMakeFiles/stickengine.dir/stickengine.cpp.o Scanning dependencies of target forceengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 27%] Building CXX object libavogadro/src/engines/CMakeFiles/forceengine.dir/forceengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/stickengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/stickengine.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target axesengine In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/forceengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/forceengine.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 28%] Building CXX object libavogadro/src/engines/CMakeFiles/axesengine.dir/axesengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/axesengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/axesengine.cpp:28: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target ringengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' Scanning dependencies of target dipoleengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/dipoleengine.dir/dipoleengine.cpp.o Scanning dependencies of target sphereengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/ringengine.dir/ringengine.cpp.o make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/dipoleengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/dipoleengine.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/sphereengine.dir/sphereengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/ringengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/ringengine.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/sphereengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/sphereengine.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target hbondengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/hbondengine.dir/hbondengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/hbondengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/hbondengine.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/forceengine.dir/moc_forceengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/forceengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_forceengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/stickengine.dir/moc_stickengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/stickengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_stickengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/forceengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_forceengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 29%] Linking CXX shared module ../../../lib64/forceengine.so [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/axesengine.dir/moc_axesengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/axesengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_axesengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 29%] Built target forceengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 29%] Generating ui_wiresettingswidget.h [ 29%] Generating moc_wireengine.cxx Scanning dependencies of target wireengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/wireengine.dir/wireengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/wireengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/wireengine.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/stickengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_stickengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 29%] Linking CXX shared module ../../../lib64/stickengine.so [ 29%] Building CXX object libavogadro/src/engines/CMakeFiles/dipoleengine.dir/moc_dipoleengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/dipoleengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_dipoleengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 29%] Built target stickengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 30%] Generating moc_polygonengine.cxx [ 30%] Building CXX object libavogadro/src/engines/CMakeFiles/wireengine.dir/moc_wireengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/wireengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_wireengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 30%] Building CXX object libavogadro/src/engines/CMakeFiles/sphereengine.dir/moc_sphereengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/sphereengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_sphereengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target polygonengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 30%] Building CXX object libavogadro/src/engines/CMakeFiles/polygonengine.dir/polygonengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/polygonengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/polygonengine.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 30%] Building CXX object libavogadro/src/engines/CMakeFiles/cartoonengine.dir/cartoonmeshgenerator.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/cartoonmeshgenerator.h:41, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/cartoonmeshgenerator.cpp:38: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/dipoleengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_dipoleengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 30%] Linking CXX shared module ../../../lib64/dipoleengine.so In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/axesengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_axesengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 30%] Built target dipoleengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/wireengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_wireengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 30%] Generating ui_qtaimsettingswidget.h In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/sphereengine.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_sphereengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 30%] Generating moc_qtaimengine.cxx [ 31%] Linking CXX shared module ../../../lib64/wireengine.so [ 31%] Linking CXX shared module ../../../lib64/axesengine.so [ 31%] Linking CXX shared module ../../../lib64/sphereengine.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Built target axesengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Generating moc_simplewireengine.cxx Scanning dependencies of target qtaimengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Building CXX object libavogadro/src/engines/CMakeFiles/qtaimengine.dir/qtaimengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/qtaimengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/qtaimengine.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Built target wireengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Generating ui_ribbonsettingswidget.h [ 31%] Building CXX object libavogadro/src/engines/CMakeFiles/polygonengine.dir/moc_polygonengine.cxx.o [ 31%] Generating moc_ribbonengine.cxx In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/polygonengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_polygonengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target simplewireengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Building CXX object libavogadro/src/engines/CMakeFiles/simplewireengine.dir/simplewireengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/simplewireengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/simplewireengine.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Built target sphereengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Generating ui_surfacesettingswidget.h [ 31%] Generating moc_surfaceengine.cxx [ 31%] Building CXX object libavogadro/src/engines/CMakeFiles/ringengine.dir/moc_ringengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/ringengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_ringengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target ribbonengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Building CXX object libavogadro/src/engines/CMakeFiles/ribbonengine.dir/ribbonengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/ribbonengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/ribbonengine.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target surfaceengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Building CXX object libavogadro/src/engines/CMakeFiles/surfaceengine.dir/surfaceengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/surfaceengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/surfaceengine.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 32%] Building CXX object libavogadro/src/engines/CMakeFiles/hbondengine.dir/moc_hbondengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/hbondengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_hbondengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/ringengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_ringengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 32%] Linking CXX shared module ../../../lib64/ringengine.so [ 32%] Building CXX object libavogadro/src/engines/CMakeFiles/simplewireengine.dir/moc_simplewireengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/simplewireengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_simplewireengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 32%] Built target ringengine [ 32%] Building CXX object libavogadro/src/engines/CMakeFiles/ribbonengine.dir/moc_ribbonengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/ribbonengine.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_ribbonengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/simplewireengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_simplewireengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 32%] Linking CXX shared module ../../../lib64/simplewireengine.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 32%] Built target simplewireengine [ 33%] Building CXX object libavogadro/src/engines/CMakeFiles/surfaceengine.dir/moc_surfaceengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/surfaceengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_surfaceengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/polygonengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_polygonengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 33%] Linking CXX shared module ../../../lib64/polygonengine.so [ 33%] Building CXX object libavogadro/src/engines/CMakeFiles/cartoonengine.dir/moc_cartoonengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/cartoonengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_cartoonengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 33%] Built target polygonengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 34%] Generating ui_labelsettingswidget.h [ 34%] Generating moc_labelengine.cxx In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/surfaceengine.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_surfaceengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 34%] Generating qrc_selectrotatetool.cxx [ 35%] Generating moc_selectrotatetool.cxx In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/hbondengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_hbondengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ Scanning dependencies of target labelengine make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 35%] Building CXX object libavogadro/src/engines/CMakeFiles/labelengine.dir/labelengine.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/labelengine.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/engines/labelengine.cpp:28: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target selectrotatetool make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 35%] Linking CXX shared module ../../../lib64/hbondengine.so make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 35%] Building CXX object libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/selectrotatetool.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/tool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/selectrotatetool.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/selectrotatetool.cpp:29: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/ribbonengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_ribbonengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 35%] Built target hbondengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 35%] Linking CXX shared module ../../../lib64/surfaceengine.so [ 36%] Linking CXX shared module ../../../lib64/ribbonengine.so [ 36%] Generating qrc_bondcentrictool.cxx [ 36%] Generating moc_bondcentrictool.cxx In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/cartoonengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_cartoonengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 36%] Built target surfaceengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 36%] Generating qrc_autorotatetool.cxx [ 36%] Built target ribbonengine [ 36%] Generating moc_skeletontree.cxx [ 36%] Generating moc_autorotatetool.cxx make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 36%] Generating qrc_drawtool.cxx [ 36%] Building CXX object libavogadro/src/engines/CMakeFiles/qtaimengine.dir/moc_qtaimengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/qtaimengine.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_qtaimengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 36%] Generating moc_drawtool.cxx Scanning dependencies of target autorotatetool make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 36%] Building CXX object libavogadro/src/tools/CMakeFiles/autorotatetool.dir/autorotatetool.cpp.o Scanning dependencies of target drawtool In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/autorotatetool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/autorotatetool.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 36%] Building CXX object libavogadro/src/tools/CMakeFiles/drawtool.dir/drawtool.cpp.o Scanning dependencies of target bondcentrictool In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/tool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/drawtool.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/drawtool.cpp:30: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 36%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/bondcentrictool.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/skeletontree.h:35, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/bondcentrictool.h:34, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/bondcentrictool.cpp:29: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/qtaimengine.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_qtaimengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 36%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/skeletontree.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/skeletontree.h:35, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/skeletontree.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 37%] Linking CXX shared module ../../../lib64/cartoonengine.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 37%] Built target cartoonengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 37%] Generating qrc_manipulatetool.cxx [ 37%] Generating moc_manipulatetool.cxx [ 37%] Linking CXX shared module ../../../lib64/qtaimengine.so [ 37%] Generating ui_manipulatesettingswidget.h Scanning dependencies of target manipulatetool make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 37%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/manipulatetool.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/manipulatetool.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/manipulatetool.cpp:24: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/bondcentrictool.cpp: In member function 'virtual QUndoCommand* Avogadro::BondCentricTool::mouseMoveEvent(Avogadro::GLWidget*, QMouseEvent*)': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/bondcentrictool.cpp:579:20: warning: variable 'clicked' set but not used [-Wunused-but-set-variable] Vector3d clicked = *m_clickedAtom->pos(); ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/bondcentrictool.cpp:679:20: warning: variable 'clicked' set but not used [-Wunused-but-set-variable] Vector3d clicked = *m_clickedAtom->pos(); ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 37%] Built target qtaimengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 37%] Generating qrc_autoopttool.cxx [ 37%] Generating moc_autoopttool.cxx [ 37%] Building CXX object libavogadro/src/tools/CMakeFiles/autorotatetool.dir/moc_autorotatetool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/autorotatetool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_autorotatetool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target autoopttool make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 37%] Building CXX object libavogadro/src/tools/CMakeFiles/autoopttool.dir/autoopttool.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/autoopttool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/autoopttool.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 37%] Building CXX object libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/moc_selectrotatetool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/tool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/selectrotatetool.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_selectrotatetool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 38%] Building CXX object libavogadro/src/tools/CMakeFiles/drawtool.dir/drawcommand.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qundostack.h:45, from /usr/include/qt4/QtGui/QUndoCommand:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/drawcommand.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/drawcommand.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 38%] Building CXX object libavogadro/src/tools/CMakeFiles/selectrotatetool.dir/qrc_selectrotatetool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/qrc_selectrotatetool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 38%] Linking CXX shared module ../../../lib64/selectrotatetool.so [ 38%] Building CXX object libavogadro/src/engines/CMakeFiles/labelengine.dir/moc_labelengine.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/labelengine.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_labelengine.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 38%] Built target selectrotatetool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 38%] Generating qrc_clickmeasuretool.cxx [ 38%] Generating moc_clickmeasuretool.cxx Scanning dependencies of target clickmeasuretool make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 38%] Building CXX object libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/clickmeasuretool.cpp.o [ 38%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/moc_bondcentrictool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/clickmeasuretool.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/clickmeasuretool.cpp:28: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/skeletontree.h:35, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/bondcentrictool.h:34, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_bondcentrictool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/../../../../libavogadro/src/engines/labelengine.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/engines/moc_labelengine.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 38%] Linking CXX shared module ../../../lib64/labelengine.so [ 38%] Building CXX object libavogadro/src/tools/CMakeFiles/autorotatetool.dir/qrc_autorotatetool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/qrc_autorotatetool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 38%] Linking CXX shared module ../../../lib64/autorotatetool.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 38%] Built target labelengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 38%] Generating qrc_aligntool.cxx [ 38%] Generating moc_aligntool.cxx [ 38%] Building CXX object libavogadro/src/tools/CMakeFiles/drawtool.dir/moc_drawtool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/tool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/drawtool.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_drawtool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target aligntool make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 38%] Building CXX object libavogadro/src/tools/CMakeFiles/aligntool.dir/aligntool.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/tool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/aligntool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/aligntool.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 38%] Built target autorotatetool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 38%] Generating ui_insertfragmentdialog.h [ 38%] Generating moc_insertfragmentextension.cxx [ 38%] Building CXX object libavogadro/src/tools/CMakeFiles/drawtool.dir/qrc_drawtool.cxx.o [ 38%] Generating moc_insertfragmentdialog.cxx In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/qrc_drawtool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 38%] Generating moc_sortfiltertreeproxymodel.cxx Scanning dependencies of target insertfragmentextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 39%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/insertfragmentextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertfragmentextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertfragmentextension.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 39%] Building CXX object libavogadro/src/tools/CMakeFiles/autoopttool.dir/moc_autoopttool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/autoopttool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_autoopttool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 39%] Linking CXX shared module ../../../lib64/drawtool.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 39%] Built target drawtool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 39%] Generating ui_insertdnadialog.h [ 40%] Generating moc_insertdnaextension.cxx Scanning dependencies of target insertdnaextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 40%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertdnaextension.dir/insertdnaextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertdnaextension.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertdnaextension.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 40%] Building CXX object libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/moc_clickmeasuretool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/clickmeasuretool.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_clickmeasuretool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 40%] Building CXX object libavogadro/src/tools/CMakeFiles/autoopttool.dir/qrc_autoopttool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/qrc_autoopttool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 41%] Linking CXX shared module ../../../lib64/autoopttool.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 41%] Built target autoopttool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 41%] Generating moc_selectextension.cxx [ 42%] Building CXX object libavogadro/src/tools/CMakeFiles/clickmeasuretool.dir/qrc_clickmeasuretool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/qrc_clickmeasuretool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target selectextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 42%] Building CXX object libavogadro/src/extensions/CMakeFiles/selectextension.dir/selectextension.cpp.o [ 42%] Linking CXX shared module ../../../lib64/clickmeasuretool.so In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/selectextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/selectextension.cpp:24: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 42%] Built target clickmeasuretool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 43%] Generating qrc_cartesianextension.cxx [ 43%] Generating ui_cartesianeditor.h [ 43%] Generating moc_cartesianextension.cxx make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 43%] Generating ui_shaderdialog.h [ 43%] Generating moc_shaderextension.cxx Scanning dependencies of target shaderextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' Scanning dependencies of target cartesianextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/shaderextension.dir/shaderextension.cpp.o [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/cartesianextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/shaderextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/shaderextension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/cartesianextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/cartesianextension.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/tools/CMakeFiles/aligntool.dir/moc_aligntool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/tool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/aligntool.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_aligntool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/insertfragmentdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertfragmentdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertfragmentdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/tools/CMakeFiles/aligntool.dir/qrc_aligntool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/qrc_aligntool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertdnaextension.dir/insertcommand.cpp.o [ 43%] Linking CXX shared module ../../../lib64/aligntool.so In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qundostack.h:45, from /usr/include/qt4/QtGui/QUndoCommand:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertcommand.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertcommand.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 43%] Built target aligntool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 43%] Generating moc_hydrogensextension.cxx Scanning dependencies of target hydrogensextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/hydrogensextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/hydrogensextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/hydrogensextension.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/insertcommand.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qundostack.h:45, from /usr/include/qt4/QtGui/QUndoCommand:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertcommand.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertcommand.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/moc_cartesianextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/cartesianextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_cartesianextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/eyecandy.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/eyecandy.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/eyecandy.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/selectextension.dir/moc_selectextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/selectextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_selectextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/shaderextension.dir/moc_shaderextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/shaderextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_shaderextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Building CXX object libavogadro/src/extensions/CMakeFiles/cartesianextension.dir/qrc_cartesianextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/qrc_cartesianextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 43%] Linking CXX shared module ../../../lib64/cartesianextension.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 43%] Built target cartesianextension [ 44%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/moveatomcommand.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qundostack.h:45, from /usr/include/qt4/QtGui/QUndoCommand:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/moveatomcommand.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/moveatomcommand.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 44%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertdnaextension.dir/moc_insertdnaextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/insertdnaextension.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_insertdnaextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/painter.h:33:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/eyecandy.cpp:30: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 44%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/moc_manipulatetool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/manipulatetool.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_manipulatetool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 44%] Building CXX object libavogadro/src/tools/CMakeFiles/manipulatetool.dir/qrc_manipulatetool.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/qrc_manipulatetool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 44%] Linking CXX shared module ../../../lib64/selectextension.so [ 44%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/moc_skeletontree.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/../../../../libavogadro/src/tools/skeletontree.h:35, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/moc_skeletontree.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 44%] Linking CXX shared module ../../../lib64/manipulatetool.so [ 45%] Linking CXX shared module ../../../lib64/shaderextension.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 45%] Built target selectextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Building CXX object libavogadro/src/tools/CMakeFiles/bondcentrictool.dir/qrc_bondcentrictool.cxx.o [ 46%] Generating moc_gl2psextension.cxx In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/tools/qrc_bondcentrictool.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/sortfiltertreeproxymodel.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/qabstractitemmodel.h:45, from /usr/include/qt4/QtGui/qabstractproxymodel.h:45, from /usr/include/qt4/QtGui/qsortfilterproxymodel.h:45, from /usr/include/qt4/QtGui/QSortFilterProxyModel:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/sortfiltertreeproxymodel.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/sortfiltertreeproxymodel.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 46%] Linking CXX shared module ../../../lib64/insertdnaextension.so [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/hydrogensextension.dir/moc_hydrogensextension.cxx.o make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Linking CXX shared module ../../../lib64/bondcentrictool.so In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/hydrogensextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_hydrogensextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 46%] Built target shaderextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Generating ui_pythonterminalwidget.h [ 46%] Generating moc_pythonterminal.cxx Scanning dependencies of target gl2psextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/gl2psextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/gl2psextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/gl2psextension.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/moc_insertfragmentextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/insertfragmentextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_insertfragmentextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Built target insertdnaextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Generating ui_vrmldialog.h /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmldialog.ui: Warning: Buddy assignment: 'dimX' is not a valid widget. [ 46%] Generating moc_vrmlextension.cxx make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Generating moc_vrmldialog.cxx make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Generating moc_highlighter.cxx [ 46%] Built target manipulatetool [ 46%] Generating moc_propextension.cxx [ 46%] Generating __/tools/moc_skeletontree.cxx [ 46%] Generating moc_propmodel.cxx Scanning dependencies of target pythonterminal make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/pythonterminal.cpp.o Scanning dependencies of target vrmlextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Building CXX object libavogadro/src/extensions/CMakeFiles/vrmlextension.dir/vrmlextension.cpp.o make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Generating ui_insertpeptidedialog.h In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/pythonterminal.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/pythonterminal.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmldialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlextension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Generating moc_insertpeptideextension.cxx [ 47%] Built target bondcentrictool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Generating moc_h2methylextension.cxx Scanning dependencies of target h2methylextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Building CXX object libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/h2methylextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/h2methylextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/h2methylextension.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target insertpeptideextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/insertpeptideextension.cpp.o Scanning dependencies of target propextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertpeptideextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertpeptideextension.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/__/tools/skeletontree.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/skeletontree.h:35, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/tools/skeletontree.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/idlist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/hydrogensextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_hydrogensextension.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 47%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/moc_insertfragmentdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/insertfragmentdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_insertfragmentdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 47%] Linking CXX shared module ../../../lib64/hydrogensextension.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Built target hydrogensextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Generating moc_invertchiralextension.cxx Scanning dependencies of target invertchiralextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Building CXX object libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/invertchiralextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/invertchiralextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/invertchiralextension.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 47%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertfragmentextension.dir/moc_sortfiltertreeproxymodel.cxx.o [ 48%] Building C object libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/gl2ps/gl2ps.c.o In file included from /usr/include/stdio.h:27:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/gl2ps/gl2ps.h:39, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/gl2ps/gl2ps.c:36: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/qabstractitemmodel.h:45, from /usr/include/qt4/QtGui/qabstractproxymodel.h:45, from /usr/include/qt4/QtGui/qsortfilterproxymodel.h:45, from /usr/include/qt4/QtGui/QSortFilterProxyModel:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/sortfiltertreeproxymodel.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_sortfiltertreeproxymodel.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 48%] Building CXX object libavogadro/src/extensions/CMakeFiles/h2methylextension.dir/moc_h2methylextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/h2methylextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_h2methylextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 49%] Building CXX object libavogadro/src/extensions/CMakeFiles/vrmlextension.dir/vrmlpainter.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.h:4, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.cpp:3: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/h2methylextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_h2methylextension.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 49%] Linking CXX shared module ../../../lib64/insertfragmentextension.so [ 49%] Linking CXX shared module ../../../lib64/h2methylextension.so [ 49%] Building CXX object libavogadro/src/extensions/CMakeFiles/invertchiralextension.dir/moc_invertchiralextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/invertchiralextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_invertchiralextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 49%] Built target h2methylextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 49%] Generating ui_conformersearchdialog.h [ 49%] Generating moc_forcefieldextension.cxx [ 49%] Generating moc_forcefielddialog.cxx [ 50%] Generating moc_constraintsdialog.cxx make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 50%] Built target insertfragmentextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 50%] Generating moc_networkfetchextension.cxx /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/gl2ps/gl2ps.c: In function 'gl2psPrintPrimitives': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/gl2ps/gl2ps.c:2204:16: warning: 'ounits' may be used uninitialized in this function [-Wmaybe-uninitialized] prim->ounits = ounits; ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/gl2ps/gl2ps.c:2247:49: note: 'ounits' was declared here GLfloat lwidth = 1.0F, psize = 1.0F, ofactor, ounits; ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/gl2ps/gl2ps.c:2203:17: warning: 'ofactor' may be used uninitialized in this function [-Wmaybe-uninitialized] prim->ofactor = ofactor; ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/gl2ps/gl2ps.c:2247:40: note: 'ofactor' was declared here GLfloat lwidth = 1.0F, psize = 1.0F, ofactor, ounits; ^ Scanning dependencies of target networkfetchextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 50%] Generating moc_constraintsmodel.cxx [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/networkfetchextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/networkfetchextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/networkfetchextension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/idlist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/invertchiralextension.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_invertchiralextension.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 50%] Linking CXX shared module ../../../lib64/invertchiralextension.so [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/gl2psextension.dir/moc_gl2psextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/gl2psextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_gl2psextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 50%] Generating moc_conformersearchdialog.cxx [ 50%] Built target invertchiralextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 50%] Generating ui_molecularpropdialog.h [ 50%] Generating moc_molecularpropextension.cxx [ 50%] Generating ui_forcefielddialog.h [ 50%] Generating ui_constraintsdialog.h Scanning dependencies of target forcefieldextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/forcefieldextension.cpp.o Scanning dependencies of target molecularpropextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/forcefielddialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/forcefieldextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/forcefieldextension.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/propmodel.cpp.o make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/include/math.h:26:0, from /usr/include/openbabel-2.0/openbabel/mol.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/propmodel.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/propmodel.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/molecularpropextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/molecularpropextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/molecularpropextension.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 50%] Building CXX object libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/highlighter.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtGui/qsyntaxhighlighter.h:45, from /usr/include/qt4/QtGui/QSyntaxHighlighter:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/highlighter.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/highlighter.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 50%] Linking CXX shared module ../../../lib64/gl2psextension.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 50%] Built target gl2psextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 50%] Generating qrc_animationextension.cxx [ 50%] Generating moc_animationextension.cxx [ 50%] Generating moc_animationdialog.cxx [ 51%] Generating ui_animationdialog.h [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/networkfetchextension.dir/moc_networkfetchextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/networkfetchextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_networkfetchextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target animationextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/animationextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/animationextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/animationextension.cpp:24: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/forcefieldextension.cpp:32:0: /usr/include/openbabel-2.0/openbabel/conformersearch.h: In member function 'void OpenBabel::OBConformerSearch::SetFilter(OpenBabel::OBConformerFilter*)': /usr/include/openbabel-2.0/openbabel/conformersearch.h:260:16: warning: deleting object of abstract class type 'OpenBabel::OBConformerFilter' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] delete m_filter; ^ /usr/include/openbabel-2.0/openbabel/conformersearch.h: In member function 'void OpenBabel::OBConformerSearch::SetScore(OpenBabel::OBConformerScore*)': /usr/include/openbabel-2.0/openbabel/conformersearch.h:274:16: warning: deleting object of abstract class type 'OpenBabel::OBConformerScore' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] delete m_score; ^ [ 51%] Linking CXX shared module ../../../lib64/networkfetchextension.so [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/moc_pythonterminal.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/pythonterminal.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_pythonterminal.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 51%] Built target networkfetchextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 51%] Generating ui_povraydialog.h [ 51%] Generating moc_povrayextension.cxx [ 51%] Generating moc_povraydialog.cxx [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/molecularpropextension.dir/moc_molecularpropextension.cxx.o Scanning dependencies of target povrayextension In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/molecularpropextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_molecularpropextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/povrayextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povraydialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povrayextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povrayextension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/propextension.cpp.o In file included from /usr/include/math.h:26:0, from /usr/include/openbabel-2.0/openbabel/mol.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/propmodel.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/propextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/propextension.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/forcefielddialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/forcefielddialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/forcefielddialog.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.cpp: In member function 'void Avogadro::VRMLPainterDevice::initializeVRML()': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.cpp:425:12: warning: variable 'cameraT' set but not used [-Wunused-but-set-variable] Vector3d cameraT = -(m_glwidget->camera()->modelview().linear().adjoint() ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.cpp:428:12: warning: variable 'cameraX' set but not used [-Wunused-but-set-variable] Vector3d cameraX = m_glwidget->camera()->backTransformedXAxis(); ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.cpp:429:12: warning: variable 'cameraY' set but not used [-Wunused-but-set-variable] Vector3d cameraY = m_glwidget->camera()->backTransformedYAxis(); ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.cpp:430:12: warning: variable 'cameraZ' set but not used [-Wunused-but-set-variable] Vector3d cameraZ = -m_glwidget->camera()->backTransformedZAxis(); ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.cpp:440:12: warning: variable 'light0pos' set but not used [-Wunused-but-set-variable] Vector3d light0pos = huge * (m_glwidget->camera()->modelview().linear().adjoint() ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.cpp:444:12: warning: variable 'light1pos' set but not used [-Wunused-but-set-variable] Vector3d light1pos = huge * (m_glwidget->camera()->modelview().linear().adjoint() ^ [ 51%] Linking CXX shared module ../../../lib64/molecularpropextension.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 51%] Built target molecularpropextension [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/constraintsdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/bits/stl_algobase.h:59, from /usr/include/c++/5/vector:60, from /usr/include/openbabel-2.0/openbabel/forcefield.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/constraintsmodel.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/constraintsdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/constraintsdialog.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/pythonterminal.dir/moc_highlighter.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtGui/qsyntaxhighlighter.h:45, from /usr/include/qt4/QtGui/QSyntaxHighlighter:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/highlighter.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_highlighter.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/animationdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/animationdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/animationdialog.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/povpainter.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povpainter.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povpainter.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/insertcommand.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qundostack.h:45, from /usr/include/qt4/QtGui/QUndoCommand:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertcommand.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertcommand.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/povpainter.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povpainter.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povpainter.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 51%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/trajvideomaker.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/trajvideomaker.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/trajvideomaker.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/pythonterminal.h:31:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_pythonterminal.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 52%] Linking CXX shared module ../../../lib64/pythonterminal.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 52%] Built target pythonterminal make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 53%] Generating ui_fileimportdialog.h [ 54%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/__/tools/moc_skeletontree.cxx.o [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/constraintsmodel.cpp.o [ 55%] Generating moc_fileimportextension.cxx In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/bits/stl_algobase.h:59, from /usr/include/c++/5/vector:60, from /usr/include/openbabel-2.0/openbabel/forcefield.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/constraintsmodel.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/constraintsmodel.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/__/tools/../../../../../../libavogadro/src/tools/skeletontree.h:35, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/__/tools/moc_skeletontree.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target fileimportextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/fileimportextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/ui_fileimportdialog.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/fileimportextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/fileimportextension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/painter.h:33:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.h:5, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmlpainter.cpp:3: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h: At global scope: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/insertpeptideextension.dir/moc_insertpeptideextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/insertpeptideextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_insertpeptideextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/moc_propmodel.cxx.o In file included from /usr/include/math.h:26:0, from /usr/include/openbabel-2.0/openbabel/mol.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/propmodel.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_propmodel.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/vrmlextension.dir/vrmldialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmldialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/vrmldialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/constraintsmodel.cpp:23:0: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/moc_animationextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/animationextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_animationextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/conformersearchdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/conformersearchdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/conformersearchdialog.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/painter.h:33:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povpainter.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povpainter.cpp:27: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 55%] Linking CXX shared module ../../../lib64/insertpeptideextension.so [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/propextension.dir/moc_propextension.cxx.o In file included from /usr/include/math.h:26:0, from /usr/include/openbabel-2.0/openbabel/mol.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/propmodel.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/propextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_propextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/moc_animationdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/animationdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_animationdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 55%] Building CXX object libavogadro/src/extensions/CMakeFiles/animationextension.dir/qrc_animationextension.cxx.o [ 55%] Built target insertpeptideextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 55%] Generating ui_supercelldialog.h In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/qrc_animationextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 55%] Generating moc_supercellextension.cxx [ 56%] Generating moc_supercelldialog.cxx make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 56%] Generating ui_symmetrydialog.h [ 57%] Generating moc_symmetryextension.cxx In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/painter.h:33:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povpainter.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povpainter.cpp:27: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ Scanning dependencies of target supercellextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 57%] Building CXX object libavogadro/src/extensions/CMakeFiles/vrmlextension.dir/moc_vrmlextension.cxx.o make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 57%] Building CXX object libavogadro/src/extensions/CMakeFiles/supercellextension.dir/supercellextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/vrmldialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/vrmlextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_vrmlextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/supercellextension.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/supercellextension.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 57%] Building CXX object libavogadro/src/extensions/CMakeFiles/fileimportextension.dir/moc_fileimportextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/ui_fileimportdialog.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/fileimportextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_fileimportextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 57%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_forcefieldextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/forcefielddialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/forcefieldextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_forcefieldextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 57%] Linking CXX shared module ../../../lib64/animationextension.so [ 58%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/povraydialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povraydialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/povraydialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target symmetryextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 58%] Building CXX object libavogadro/src/extensions/symmetry/CMakeFiles/symmetryextension.dir/symmetryextension.cpp.o [ 58%] Built target animationextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/symmetryextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/symmetry/symmetryextension.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 58%] Generating ui_ceviewoptionswidget.h [ 58%] Generating moc_crystallographyextension.cxx [ 58%] Generating moc_crystalpastedialog.cxx [ 58%] Generating ui/moc_ceabstractdockwidget.cxx [ 58%] Generating ui/moc_ceabstracteditor.cxx [ 58%] Generating ui/moc_cecoordinateeditor.cxx [ 58%] Generating ui/moc_cematrixeditor.cxx [ 58%] Linking CXX shared module ../../../lib64/propextension.so [ 58%] Generating ui/moc_ceparametereditor.cxx [ 58%] Building CXX object libavogadro/src/extensions/CMakeFiles/vrmlextension.dir/moc_vrmldialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/vrmldialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_vrmldialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 58%] Built target propextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 59%] Generating ui_vibrationwidget.h [ 59%] Generating ui/moc_ceslabbuilder.cxx [ 59%] Generating moc_vibrationextension.cxx [ 60%] Generating ui/moc_cetranslatewidget.cxx [ 60%] Generating ui/moc_ceviewoptionswidget.cxx [ 60%] Generating ui_crystalpastedialog.h [ 60%] Generating ui_cecoordinateeditor.h [ 60%] Generating ui_cematrixeditor.h [ 60%] Generating ui_ceparametereditor.h [ 60%] Generating ui_ceslabbuilder.h [ 60%] Generating ui_cetranslatewidget.h [ 60%] Generating moc_vibrationwidget.cxx [ 60%] Linking CXX shared module ../../../lib64/fileimportextension.so Scanning dependencies of target crystallographyextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 60%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/avospglib.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/new:39, from /usr/include/eigen3/Eigen/Core:66, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/avospglib.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/avospglib.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 60%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_forcefielddialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/forcefielddialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_forcefielddialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' Scanning dependencies of target vibrationextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 60%] Built target fileimportextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 60%] Generating ui_tab_cd.h [ 60%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/vibrationextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/QWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/vibrationwidget.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/vibrationextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/vibrationextension.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 61%] Generating moc_spectraextension.cxx [ 61%] Generating moc_spectradialog.cxx [ 61%] Generating moc_spectratype.cxx [ 61%] Generating moc_abstract_ir.cxx [ 61%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_constraintsdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/bits/stl_algobase.h:59, from /usr/include/c++/5/vector:60, from /usr/include/openbabel-2.0/openbabel/forcefield.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/constraintsmodel.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/constraintsdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_constraintsdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 61%] Generating moc_ir.cxx [ 61%] Generating moc_nmr.cxx [ 61%] Building CXX object libavogadro/src/extensions/CMakeFiles/supercellextension.dir/supercelldialog.cpp.o [ 61%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/moc_povrayextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/povraydialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/povrayextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_povrayextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/ui_supercelldialog.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/supercelldialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/supercelldialog.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 61%] Generating moc_dos.cxx [ 61%] Generating moc_uv.cxx [ 61%] Generating moc_cd.cxx [ 61%] Generating moc_raman.cxx [ 62%] Generating ui_spectradialog.h [ 62%] Generating ui_tab_ir_raman.h [ 62%] Generating ui_tab_nmr.h [ 62%] Generating ui_tab_dos.h [ 62%] Generating ui_tab_uv.h [ 62%] Linking CXX shared module ../../../lib64/vrmlextension.so Scanning dependencies of target spectraextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 62%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/spectraextension.cpp.o [ 62%] Built target vrmlextension In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/spectradialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/spectraextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/spectraextension.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 62%] Generating ui_surfacedialog.h [ 62%] Generating moc_surfaceextension.cxx [ 62%] Generating moc_surfacedialog.cxx [ 62%] Generating moc_vdwsurface.cxx [ 62%] Generating qtiocompressor/moc_qtiocompressor.cxx [ 62%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_constraintsmodel.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/bits/stl_algobase.h:59, from /usr/include/c++/5/vector:60, from /usr/include/openbabel-2.0/openbabel/forcefield.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/constraintsmodel.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_constraintsmodel.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target surfaceextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 62%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/surfaceextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/surfacedialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/surfaceextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/surfaceextension.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 62%] Building CXX object libavogadro/src/extensions/CMakeFiles/povrayextension.dir/moc_povraydialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/povraydialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_povraydialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 62%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/vibrationwidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/QWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/vibrationwidget.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/vibrationwidget.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 63%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ceundo.cpp.o [ 63%] Building CXX object libavogadro/src/extensions/CMakeFiles/supercellextension.dir/moc_supercellextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceslabbuilder.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/crystallographyextension.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ceundo.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ceundo.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/supercellextension.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_supercellextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 63%] Building CXX object libavogadro/src/extensions/symmetry/CMakeFiles/symmetryextension.dir/moc_symmetryextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/symmetry/../../../../../libavogadro/src/extensions/symmetry/symmetryextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/symmetry/moc_symmetryextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 63%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/spectradialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/spectradialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/spectradialog.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 63%] Building CXX object libavogadro/src/extensions/CMakeFiles/supercellextension.dir/moc_supercelldialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/ui_supercelldialog.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/supercelldialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_supercelldialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 63%] Linking CXX shared module ../../../lib64/povrayextension.so [ 63%] Building CXX object libavogadro/src/extensions/CMakeFiles/forcefieldextension.dir/moc_conformersearchdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/conformersearchdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_conformersearchdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 63%] Linking CXX shared module ../../../lib64/supercellextension.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 63%] Built target povrayextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 63%] Generating ui_orbitalsettingsdialog.h [ 63%] Generating moc_orbitalextension.cxx [ 63%] Linking CXX shared module ../../../../lib64/symmetryextension.so [ 63%] Generating moc_orbitalsettingsdialog.cxx [ 63%] Generating moc_orbitaltablemodel.cxx [ 64%] Generating moc_orbitalwidget.cxx make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 64%] Generating moc_htmldelegate.cxx [ 64%] Built target supercellextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 65%] Generating ui_swcntbuilderwidget.h [ 65%] Generating ui_orbitalwidget.h [ 65%] Generating moc_swcntbuilderextension.cxx [ 65%] Generating moc_swcntbuilderwidget.cxx make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 65%] Built target symmetryextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 65%] Generating moc_qtaimextension.cxx [ 65%] Generating moc_avotubegen.cxx Scanning dependencies of target orbitalextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 65%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/orbitalextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalextension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target qtaimextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' Scanning dependencies of target swcntbuilderextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 65%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimextension.cpp.o make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 65%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/__/insertcommand.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimextension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qundostack.h:45, from /usr/include/qt4/QtGui/QUndoCommand:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertcommand.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/insertcommand.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/../../../../libavogadro/src/extensions/conformersearchdialog.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/moc_conformersearchdialog.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 65%] Linking CXX shared module ../../../lib64/forcefieldextension.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 65%] Built target forcefieldextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 65%] Generating ui_lammpsinputdialog.h [ 65%] Generating moc_inputfileextension.cxx [ 65%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/surfacedialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/surfacedialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/surfacedialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 65%] Generating moc_inputdialog.cxx [ 65%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/crystallographyextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceslabbuilder.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/crystallographyextension.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/crystallographyextension.cpp:32: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 65%] Generating moc_abinitinputdialog.cxx [ 66%] Generating moc_daltoninputdialog.cxx [ 66%] Generating moc_gamessukinputdialog.cxx [ 66%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/moc_vibrationextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/QWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/vibrationwidget.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/vibrationextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_vibrationextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 66%] Generating moc_gaussianinputdialog.cxx [ 66%] Generating moc_molproinputdialog.cxx [ 66%] Generating moc_mopacinputdialog.cxx [ 66%] Generating moc_nwcheminputdialog.cxx [ 66%] Generating moc_psi4inputdialog.cxx [ 66%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/swcntbuilderextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/swcntbuilder/swcntbuilderextension.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/swcntbuilder/swcntbuilderextension.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 66%] Generating moc_qcheminputdialog.cxx [ 66%] Generating moc_teracheminputdialog.cxx [ 66%] Generating moc_lammpsinputdialog.cxx [ 67%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/vdwsurface.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/vdwsurface.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/vdwsurface.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 68%] Generating ui_abinitinputdialog.h [ 68%] Generating ui_gaussianinputdialog.h [ 68%] Generating ui_daltoninputdialog.h [ 68%] Generating ui_gamessukinputdialog.h [ 68%] Generating ui_molproinputdialog.h [ 68%] Generating ui_mopacinputdialog.h [ 68%] Generating ui_nwcheminputdialog.h [ 68%] Generating ui_psi4inputdialog.h [ 68%] Generating ui_qcheminputdialog.h [ 69%] Generating ui_teracheminputdialog.h In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/vibrationwidget.h:28:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/vibrationextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_vibrationextension.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 69%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/spectratype.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/spectratype.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/spectratype.cpp:21: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 69%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/vibrationextension.dir/moc_vibrationwidget.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/QWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/vibrationwidget.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_vibrationwidget.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target inputfileextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 69%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/swcntbuilderwidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/swcntbuilder/swcntbuilderwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/swcntbuilder/swcntbuilderwidget.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 69%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/inputfileextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputfileextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputfileextension.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 69%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/orbitalsettingsdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalsettingsdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalsettingsdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 69%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimwavefunction.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qalgorithms.h:45, from /usr/include/qt4/QtCore/qdebug.h:45, from /usr/include/qt4/QtCore/QDebug:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimwavefunction.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/vibrationwidget.h:28:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_vibrationwidget.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 69%] Linking CXX shared module ../../../../lib64/vibrationextension.so [ 69%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/qtiocompressor/qtiocompressor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/QIODevice:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/qtiocompressor/qtiocompressor.h:50, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/qtiocompressor/qtiocompressor.cpp:47: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 69%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/avotubegen.cpp.o make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 69%] Built target vibrationextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 69%] Generating ui_gamessefpmatchdialog.h In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/swcntbuilder/avotubegen.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/swcntbuilder/avotubegen.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 69%] Generating moc_gamessextension.cxx [ 70%] Generating moc_gamessinputdialog.cxx [ 70%] Generating moc_gamesshighlighter.cxx [ 70%] Generating moc_gamessefpmatchdialog.cxx [ 70%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/moc_surfaceextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/surfacedialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/surfaceextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_surfaceextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 70%] Generating ui_gamessinputdialog.h Scanning dependencies of target gamessextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 70%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/inputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 71%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/abstract_ir.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/spectradialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/abstract_ir.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/abstract_ir.cpp:21: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 71%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/moc_swcntbuilderextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/swcntbuilder/../../../../../libavogadro/src/extensions/swcntbuilder/swcntbuilderextension.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/swcntbuilder/moc_swcntbuilderextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalwidget.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalsettingsdialog.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalsettingsdialog.cpp:25: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 71%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/orbitaltablemodel.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitaltablemodel.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitaltablemodel.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 71%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamessextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessinputdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessextension.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/cube.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/surfacedialog.h:34, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/surfaceextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_surfaceextension.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 71%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/moc_surfacedialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/surfacedialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_surfacedialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 71%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/moc_swcntbuilderwidget.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/swcntbuilder/../../../../../libavogadro/src/extensions/swcntbuilder/swcntbuilderwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/swcntbuilder/moc_swcntbuilderwidget.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 71%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/inputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 71%] Building CXX object libavogadro/src/extensions/swcntbuilder/CMakeFiles/swcntbuilderextension.dir/moc_avotubegen.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/swcntbuilder/../../../../../libavogadro/src/extensions/swcntbuilder/avotubegen.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/swcntbuilder/moc_avotubegen.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 72%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimwavefunctionevaluator.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/cmath:41, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimwavefunctionevaluator.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 72%] Linking CXX shared module ../../../../lib64/swcntbuilderextension.so [ 72%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/ir.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/spectradialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/abstract_ir.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/ir.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/ir.cpp:21: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/cube.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/surfacedialog.h:34, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_surfacedialog.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 72%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/moc_vdwsurface.cxx.o make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 72%] Built target swcntbuilderextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/vdwsurface.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_vdwsurface.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 72%] Generating ui_orcaspectra.h [ 72%] Generating moc_orcaextension.cxx [ 72%] Generating moc_orcainputdialog.cxx In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalwidget.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitaltablemodel.cpp:21: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 72%] Generating moc_orcaanalysedialog.cxx [ 73%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/orbitalwidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/QWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalwidget.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalwidget.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 73%] Generating moc_orcaspectra.cxx [ 73%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/abinitinputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qprocess.h:45, from /usr/include/qt4/QtCore/QProcess:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/abinitinputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/abinitinputdialog.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 73%] Generating ui_orcainputdialog.h /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget1'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget2'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget3'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget4'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget5'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget6'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget7'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget8'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget9'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget10'. /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget11'. [ 73%] Generating ui_orcaanalysedialog.h /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcaanalysedialog.ui: Warning: The name 'layoutWidget' (QWidget) is already in use, defaulting to 'layoutWidget1'. [ 73%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/surfaceextension.dir/qtiocompressor/moc_qtiocompressor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/QIODevice:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/qtiocompressor/../../../../../../libavogadro/src/extensions/surfaces/qtiocompressor/qtiocompressor.h:50, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/qtiocompressor/moc_qtiocompressor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target orcaextension make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 74%] Building CXX object libavogadro/src/extensions/orca/CMakeFiles/orcaextension.dir/orcaextension.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcaextension.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcaextension.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 74%] Linking CXX shared module ../../../../lib64/surfaceextension.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 74%] Built target surfaceextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 74%] Generating ui_residuecolorsettings.h [ 75%] Generating moc_residuecolor.cxx In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalwidget.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/orbitalwidget.cpp:19: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ Scanning dependencies of target residuecolor make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 75%] Building CXX object libavogadro/src/colors/CMakeFiles/residuecolor.dir/residuecolor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/residuecolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/residuecolor.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/vdwsurface.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/vdwsurface.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/vdwsurface.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/nmr.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qhash.h:45, from /usr/include/qt4/QtCore/QHash:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/nmr.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/nmr.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamessinputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessinputdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessinputdialog.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/dos.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/string:38, from /usr/include/openbabel-2.0/openbabel/generic.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/dos.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/crystalpastedialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/crystalpastedialog.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/crystalpastedialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/orca/CMakeFiles/orcaextension.dir/orcainputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcainputdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/qtiocompressor/qtiocompressor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/QIODevice:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/qtiocompressor/qtiocompressor.h:50, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/qtiocompressor/qtiocompressor.cpp:47: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimodeintegrator.cpp.o [ 75%] Building CXX object libavogadro/src/colors/CMakeFiles/residuecolor.dir/moc_residuecolor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qalgorithms.h:45, from /usr/include/qt4/QtCore/qdebug.h:45, from /usr/include/qt4/QtCore/QDebug:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimodeintegrator.cpp:29: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/../../../../libavogadro/src/colors/residuecolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/moc_residuecolor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/daltoninputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/daltoninputdialog.h:13, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/daltoninputdialog.cpp:10: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Linking CXX shared module ../../../lib64/residuecolor.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 75%] Built target residuecolor [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamessinputdata.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/iostream:38, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessinputdata.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessinputdata.cpp:14: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/htmldelegate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qabstractitemdelegate.h:45, from /usr/include/qt4/QtGui/qstyleditemdelegate.h:45, from /usr/include/qt4/QtGui/QStyledItemDelegate:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/htmldelegate.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/surfaces/htmldelegate.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimcriticalpointlocator.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qalgorithms.h:45, from /usr/include/qt4/QtCore/qdebug.h:45, from /usr/include/qt4/QtCore/QDebug:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimcriticalpointlocator.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimcriticalpointlocator.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/uv.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/string:38, from /usr/include/openbabel-2.0/openbabel/generic.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/uv.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_orbitalextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_orbitalextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceabstractdockwidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_orbitalsettingsdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalsettingsdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_orbitalsettingsdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceabstracteditor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstracteditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstracteditor.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamesshighlighter.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtGui/qsyntaxhighlighter.h:45, from /usr/include/qt4/QtGui/QSyntaxHighlighter:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamesshighlighter.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamesshighlighter.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 75%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/cd.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/string:38, from /usr/include/openbabel-2.0/openbabel/generic.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/cd.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/gamessefpmatchdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/cecoordinateeditor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstracteditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/cecoordinateeditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/cecoordinateeditor.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalwidget.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalsettingsdialog.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_orbitalsettingsdialog.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 76%] Building CXX object libavogadro/src/extensions/orca/CMakeFiles/orcaextension.dir/orcaanalysedialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcaanalysedialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcaanalysedialog.cpp:29: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_orbitaltablemodel.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitaltablemodel.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_orbitaltablemodel.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/gamessukinputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessukinputdialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessukinputdialog.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimmathutilities.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/QtGlobal:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_inputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_inputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.h:27:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.cpp:25: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 76%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_gamessextension.cxx.o [ 76%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_orbitalwidget.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessinputdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessextension.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_gamessextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/QWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalwidget.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_orbitalwidget.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_gamessinputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessinputdialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_gamessinputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/orbitalwidget.h:24:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_orbitalwidget.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp: In function 'Eigen::Matrix Avogadro::QTAIMMathUtilities::minusThreeSignatureLocatorGradient(const Eigen::Matrix&, const Eigen::Matrix&)': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp:184:25: warning: variable 'evec' set but not used [-Wunused-but-set-variable] Matrix evec = eigenvectorsOfASymmetricFourByFourMatrix(A); ^ [ 76%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_vdwsurface.cxx.o /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp: In function 'Eigen::Matrix Avogadro::QTAIMMathUtilities::minusOneSignatureLocatorGradient(const Eigen::Matrix&, const Eigen::Matrix&)': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp:224:25: warning: variable 'evec' set but not used [-Wunused-but-set-variable] Matrix evec = eigenvectorsOfASymmetricThreeByThreeMatrix(A); ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/vdwsurface.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_vdwsurface.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp: In function 'Eigen::Matrix Avogadro::QTAIMMathUtilities::plusOneSignatureLocatorGradient(const Eigen::Matrix&, const Eigen::Matrix&)': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp:264:25: warning: variable 'evec' set but not used [-Wunused-but-set-variable] Matrix evec = eigenvectorsOfASymmetricThreeByThreeMatrix(A); ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp: In function 'Eigen::Matrix Avogadro::QTAIMMathUtilities::plusThreeSignatureLocatorGradient(const Eigen::Matrix&, const Eigen::Matrix&)': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimmathutilities.cpp:305:25: warning: variable 'evec' set but not used [-Wunused-but-set-variable] Matrix evec = eigenvectorsOfASymmetricFourByFourMatrix(A); ^ /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcaanalysedialog.cpp: In member function 'QString Avogadro::OrcaAnalyseDialog::readOutputFile()': /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcaanalysedialog.cpp:470:10: warning: variable 'virtualAtoms' set but not used [-Wunused-but-set-variable] bool virtualAtoms = false; ^ [ 76%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/raman.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/string:38, from /usr/include/openbabel-2.0/openbabel/generic.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/spectra/raman.cpp:20: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/cematrixeditor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstracteditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/cematrixeditor.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/cematrixeditor.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_gamesshighlighter.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtGui/qsyntaxhighlighter.h:45, from /usr/include/qt4/QtGui/QSyntaxHighlighter:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamesshighlighter.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_gamesshighlighter.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 76%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/qtiocompressor/moc_qtiocompressor.cxx.o [ 76%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/gamessextension.dir/moc_gamessefpmatchdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/QIODevice:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/qtiocompressor/../../../../../../libavogadro/src/extensions/surfaces/qtiocompressor/qtiocompressor.h:50, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/qtiocompressor/moc_qtiocompressor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_gamessefpmatchdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 77%] Building CXX object libavogadro/src/extensions/surfaces/CMakeFiles/orbitalextension.dir/moc_htmldelegate.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qabstractitemdelegate.h:45, from /usr/include/qt4/QtGui/qstyleditemdelegate.h:45, from /usr/include/qt4/QtGui/QStyledItemDelegate:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/../../../../../libavogadro/src/extensions/surfaces/htmldelegate.h:22, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/surfaces/moc_htmldelegate.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 77%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimlsodaintegrator.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qalgorithms.h:45, from /usr/include/qt4/QtCore/qdebug.h:45, from /usr/include/qt4/QtCore/QDebug:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimlsodaintegrator.cpp:48: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 77%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_spectraextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectraextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_spectraextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessefpmatchdialog.h:27:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_gamessefpmatchdialog.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 77%] Linking CXX shared module ../../../../lib64/gamessextension.so [ 77%] Linking CXX shared module ../../../../lib64/orbitalextension.so [ 77%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceparametereditor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstracteditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceparametereditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceparametereditor.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 77%] Built target gamessextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Generating moc_atomindexcolor.cxx Scanning dependencies of target atomindexcolor make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/atomindexcolor.cpp.o [ 78%] Built target orbitalextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/atomindexcolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/atomindexcolor.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 78%] Generating moc_smartscolor.cxx [ 78%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/gaussianinputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qprocess.h:45, from /usr/include/qt4/QtCore/QProcess:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gaussianinputdialog.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/gaussianinputdialog.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target smartscolor make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/smartscolor.dir/smartscolor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/smartscolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/smartscolor.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 78%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/qtaimcubature.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qalgorithms.h:45, from /usr/include/qt4/QtCore/qdebug.h:45, from /usr/include/qt4/QtCore/QDebug:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/qtaim/qtaimcubature.cpp:39: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 78%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_spectradialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_spectradialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 78%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceslabbuilder.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceslabbuilder.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceslabbuilder.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/atomindexcolor.dir/moc_atomindexcolor.cxx.o [ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/smartscolor.dir/moc_smartscolor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/../../../../libavogadro/src/colors/atomindexcolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/moc_atomindexcolor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/../../../../libavogadro/src/colors/smartscolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/moc_smartscolor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 78%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_spectratype.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectratype.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_spectratype.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 78%] Linking CXX shared module ../../../lib64/atomindexcolor.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Built target atomindexcolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Generating moc_chargecolor.cxx [ 78%] Linking CXX shared module ../../../lib64/smartscolor.so Scanning dependencies of target chargecolor make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/chargecolor.dir/chargecolor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/chargecolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/chargecolor.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Built target smartscolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Generating moc_distancecolor.cxx Scanning dependencies of target distancecolor make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/distancecolor.dir/distancecolor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/distancecolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/distancecolor.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 78%] Building CXX object libavogadro/src/colors/CMakeFiles/distancecolor.dir/moc_distancecolor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/../../../../libavogadro/src/colors/distancecolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/moc_distancecolor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 79%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_abstract_ir.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/abstract_ir.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_abstract_ir.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 79%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/molproinputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/molproinputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/molproinputdialog.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 79%] Building CXX object libavogadro/src/colors/CMakeFiles/chargecolor.dir/moc_chargecolor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/../../../../libavogadro/src/colors/chargecolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/moc_chargecolor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 79%] Linking CXX shared module ../../../lib64/distancecolor.so [ 79%] Linking CXX shared module ../../../lib64/chargecolor.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 79%] Building CXX object libavogadro/src/extensions/qtaim/CMakeFiles/qtaimextension.dir/moc_qtaimextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/qtaim/../../../../../libavogadro/src/extensions/qtaim/qtaimextension.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/qtaim/moc_qtaimextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 79%] Building CXX object libavogadro/src/extensions/orca/CMakeFiles/orcaextension.dir/orcaspectra.cpp.o [ 79%] Built target chargecolor make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/ui_orcaspectra.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcaspectra.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcaspectra.cpp:24: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 79%] Generating moc_customcolor.cxx [ 79%] Built target distancecolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 79%] Generating moleculelist.moc Scanning dependencies of target customcolor make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 79%] Building CXX object libavogadro/src/colors/CMakeFiles/customcolor.dir/customcolor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/customcolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/colors/customcolor.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target python-module make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 79%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/animation.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/animation.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 79%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_ir.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/abstract_ir.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/ir.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_ir.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/qtaim/../../../../../libavogadro/src/extensions/qtaim/qtaimextension.h:26:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/qtaim/moc_qtaimextension.cxx:9: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 79%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_nmr.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qhash.h:45, from /usr/include/qt4/QtCore/QHash:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/nmr.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_nmr.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 80%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/cetranslatewidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/cetranslatewidget.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/cetranslatewidget.cpp:18: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 80%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_dos.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qhash.h:45, from /usr/include/qt4/QtCore/QHash:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/dos.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_dos.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 80%] Building CXX object libavogadro/src/extensions/orca/CMakeFiles/orcaextension.dir/orcadata.cpp.o [ 80%] Linking CXX shared module ../../../../lib64/qtaimextension.so In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/orca/orcadata.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 80%] Building CXX object libavogadro/src/colors/CMakeFiles/customcolor.dir/moc_customcolor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/../../../../libavogadro/src/colors/customcolor.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/colors/moc_customcolor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 80%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_uv.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qhash.h:45, from /usr/include/qt4/QtCore/QHash:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/uv.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_uv.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 80%] Built target qtaimextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 81%] Generating avogadro_zh_TW.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 81%] Linking CXX shared module ../../../lib64/customcolor.so [ 81%] Generating aboutdialog.moc [ 81%] Generating addenginedialog.moc [ 82%] Generating application.moc [ 82%] Generating detachedview.moc [ 82%] Generating enginecolorswidget.moc [ 82%] Generating engineitemdelegate.moc make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 82%] Built target customcolor [ 82%] Generating engineitemmodel.moc [ 82%] Generating enginelistview.moc [ 82%] Generating engineprimitiveswidget.moc [ 82%] Generating engineviewwidget.moc [ 82%] Generating flattabwidget.moc [ 83%] Generating glgraphicsview.moc [ 83%] Generating importdialog.moc [ 83%] Generating mainwindow.moc [ 83%] Generating pluginitemmodel.moc [ 83%] Generating pluginlistview.moc [ 83%] Generating pluginsettings.moc [ 83%] Generating primitiveitemmodel.moc [ 83%] Generating primitivetreeview.moc [ 83%] Generating projecttreeeditor.moc [ 83%] Generating projecttreemodel.moc [ 84%] Generating projecttreemodeldelegate.moc [ 84%] Generating savedialog.moc [ 84%] Generating settingsdialog.moc [ 84%] Generating atomdelegate.moc [ 84%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_cd.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qhash.h:45, from /usr/include/qt4/QtCore/QHash:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/cd.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_cd.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 84%] Generating bonddelegate.moc [ 84%] Generating labeldelegate.moc [ 84%] Building CXX object libavogadro/src/extensions/orca/CMakeFiles/orcaextension.dir/moc_orcaextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/../../../../../libavogadro/src/extensions/orca/orcaextension.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/moc_orcaextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 84%] Generating moleculedelegate.moc [ 84%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/mopacinputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/mopacinputdialog.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/mopacinputdialog.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 84%] Generating residuedelegate.moc [ 84%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/ceviewoptionswidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceviewoptionswidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/crystallography/ui/ceviewoptionswidget.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 84%] Generating selectiondelegate.moc [ 84%] Generating ui_addenginedialog.h [ 85%] Generating ui_enginecolorswidget.h [ 85%] Generating ui_engineprimitiveswidget.h [ 85%] Generating ui_importdialog.h [ 85%] Generating ui_mainwindow.h [ 85%] Generating ui_pluginsettings.h [ 85%] Generating ui_projecttreeeditor.h [ 85%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/moc_raman.cxx.o [ 85%] Generating ui_settingsdialog.h In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/spectradialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/abstract_ir.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/../../../../../libavogadro/src/extensions/spectra/raman.h:24, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/spectra/moc_raman.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 85%] Generating qrc_avogadro.cxx [ 85%] Generating avogadro_af.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 85%] Building CXX object libavogadro/src/extensions/orca/CMakeFiles/orcaextension.dir/moc_orcainputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/../../../../../libavogadro/src/extensions/orca/orcainputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/moc_orcainputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 86%] Generating avogadro_ar.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Generating avogadro_bg.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Generating avogadro_ca.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/atom.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/atom.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 86%] Generating avogadro_ca@valencia.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Generating avogadro_cs.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Generating avogadro_da.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Generating avogadro_de.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/bond.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/bond.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 86%] Generating avogadro_el.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Building CXX object libavogadro/src/extensions/orca/CMakeFiles/orcaextension.dir/moc_orcaanalysedialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/../../../../../libavogadro/src/extensions/orca/orcaanalysedialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/moc_orcaanalysedialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 86%] Generating avogadro_en_AU.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Generating avogadro_en_CA.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 86%] Building CXX object libavogadro/src/extensions/orca/CMakeFiles/orcaextension.dir/moc_orcaspectra.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/ui_orcaspectra.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/../../../../../libavogadro/src/extensions/orca/orcaspectra.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/orca/moc_orcaspectra.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 87%] Generating avogadro_en_GB.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 87%] Linking CXX shared module ../../../../lib64/spectraextension.so [ 87%] Generating avogadro_es.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 87%] Generating avogadro_et.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 87%] Built target spectraextension [ 87%] Generating avogadro_eu.qm [ 87%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/camera.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/camera.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 87%] Generating avogadro_fi.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 87%] Generating avogadro_fr.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 87%] Generating avogadro_fr_CA.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 88%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/color.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/color.cpp:3: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 88%] Generating avogadro_gl.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 88%] Generating avogadro_he.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 89%] Generating avogadro_hi.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 89%] Generating avogadro_hr.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 89%] Generating avogadro_hu.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 89%] Generating avogadro_id.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 89%] Generating avogadro_it.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 89%] Generating avogadro_ja.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 89%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/moc_crystallographyextension.cxx.o [ 89%] Generating avogadro_kn.qm In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/../../../../../libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/../../../../../libavogadro/src/extensions/crystallography/ui/ceslabbuilder.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/../../../../../libavogadro/src/extensions/crystallography/crystallographyextension.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/moc_crystallographyextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 89%] Generating avogadro_ko.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 89%] Generating avogadro_ms.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 90%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/nwcheminputdialog.cpp.o [ 90%] Generating avogadro_nb.qm In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/nwcheminputdialog.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/nwcheminputdialog.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 91%] Generating avogadro_nl.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 91%] Generating avogadro_oc.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 91%] Generating avogadro_pl.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 91%] Generating avogadro_pt.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 91%] Generating avogadro_pt_BR.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 91%] Generating avogadro_ru.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 91%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/cube.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/cube.cpp:3: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 91%] Generating avogadro_sk.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 91%] Generating avogadro_sl.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 91%] Linking CXX shared module ../../../../lib64/orcaextension.so [ 91%] Generating avogadro_sq.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 92%] Generating avogadro_sr.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 92%] Built target orcaextension [ 92%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/psi4inputdialog.cpp.o [ 92%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/moc_crystalpastedialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/psi4inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/psi4inputdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/../../../../../libavogadro/src/extensions/crystallography/crystalpastedialog.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/moc_crystalpastedialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Generating avogadro_sv.qm [ 92%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceabstractdockwidget.cxx.o Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/moc_ceabstractdockwidget.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Generating avogadro_ta.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 92%] Generating avogadro_te.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 92%] Generating avogadro_th.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 92%] Generating avogadro_tr.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 92%] Generating avogadro_ug.qm [ 92%] Generating avogadro_uk.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 92%] Generating avogadro_vi.qm [ 92%] Generating avogadro_zh_CN.qm Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... Scanning directory '/usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src'... [ 92%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/qcheminputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/qcheminputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/qcheminputdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ Scanning dependencies of target avogadro-app make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 92%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/aboutdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdialog.h:45, from /usr/include/qt4/QtGui/QDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/aboutdialog.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/aboutdialog.cpp:19: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/teracheminputdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/teracheminputdialog.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/teracheminputdialog.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/addenginedialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/avogadro/src/ui_addenginedialog.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/addenginedialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/addenginedialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceabstracteditor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceabstracteditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/moc_ceabstracteditor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_cecoordinateeditor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceabstracteditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/cecoordinateeditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/moc_cecoordinateeditor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/color.cpp:6:0: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 92%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/lammpsinputdialog.cpp.o [ 92%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_inputfileextension.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/lammpsinputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/extensions/quantuminput/lammpsinputdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/eigen.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputfileextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_inputfileextension.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/eigen.cpp:4: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1788:0, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18, from /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/eigen.cpp:5: /usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ [ 92%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_cematrixeditor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceabstracteditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/cematrixeditor.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/moc_cematrixeditor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/addenginedialog.cpp:27: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 92%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_inputdialog.cxx.o [ 92%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_abinitinputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_inputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/application.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qprocess.h:45, from /usr/include/qt4/QtCore/QProcess:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/abinitinputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_abinitinputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qcoreapplication.h:45, from /usr/include/qt4/QtGui/qapplication.h:45, from /usr/include/qt4/QtGui/QApplication:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/application.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/application.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceparametereditor.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceabstracteditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceparametereditor.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/moc_ceparametereditor.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_daltoninputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/daltoninputdialog.h:13, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_daltoninputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/mainwindow.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/application.cpp:23: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 92%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceslabbuilder.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceslabbuilder.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/moc_ceslabbuilder.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/detachedview.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/QWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/detachedview.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/detachedview.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 92%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_gamessukinputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gamessukinputdialog.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_gamessukinputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 93%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_gaussianinputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qiodevice.h:46, from /usr/include/qt4/QtCore/qprocess.h:45, from /usr/include/qt4/QtCore/QProcess:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/gaussianinputdialog.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_gaussianinputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 93%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/editcommands.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qundostack.h:45, from /usr/include/qt4/QtGui/QUndoCommand:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/editcommands.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/editcommands.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 93%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_molproinputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/molproinputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_molproinputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 93%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_mopacinputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/mopacinputdialog.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_mopacinputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 93%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_nwcheminputdialog.cxx.o [ 94%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_cetranslatewidget.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/nwcheminputdialog.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_nwcheminputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/cetranslatewidget.h:23, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/moc_cetranslatewidget.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 94%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/enginecolorswidget.cpp.o [ 94%] Building CXX object libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/ui/moc_ceviewoptionswidget.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/avogadro/src/ui_enginecolorswidget.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/enginecolorswidget.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/enginecolorswidget.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qdockwidget.h:45, from /usr/include/qt4/QtGui/QDockWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceabstractdockwidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/../../../../../../libavogadro/src/extensions/crystallography/ui/ceviewoptionswidget.h:21, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/crystallography/ui/moc_ceviewoptionswidget.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 94%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_psi4inputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/glwidget.h:32, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/psi4inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_psi4inputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/elementtranslator.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/elementtranslator.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/engine.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/engine.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 94%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_qcheminputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/qcheminputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_qcheminputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/enginecolorswidget.cpp:27: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 94%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/engineitemdelegate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtGui/qabstractitemdelegate.h:45, from /usr/include/qt4/QtGui/qstyleditemdelegate.h:45, from /usr/include/qt4/QtGui/QStyledItemDelegate:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineitemdelegate.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineitemdelegate.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 94%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_teracheminputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/teracheminputdialog.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_teracheminputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 94%] Linking CXX shared module ../../../../lib64/crystallographyextension.so [ 94%] Building CXX object libavogadro/src/extensions/quantuminput/CMakeFiles/inputfileextension.dir/moc_lammpsinputdialog.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:31, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/molecule.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/inputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/../../../../../libavogadro/src/extensions/quantuminput/lammpsinputdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/src/extensions/quantuminput/moc_lammpsinputdialog.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 94%] Built target crystallographyextension [ 94%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/engineitemmodel.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/qabstractitemmodel.h:45, from /usr/include/qt4/QtCore/QModelIndex:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineitemmodel.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineitemmodel.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/extension.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/extension.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 94%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/fragment.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/fragment.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineitemdelegate.cpp:27: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 94%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/enginelistview.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qabstractscrollarea.h:45, from /usr/include/qt4/QtGui/qabstractitemview.h:45, from /usr/include/qt4/QtGui/qlistview.h:45, from /usr/include/qt4/QtGui/QListView:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/enginelistview.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/enginelistview.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineitemmodel.cpp:29: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/engineprimitiveswidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/avogadro/src/ui_engineprimitiveswidget.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineprimitiveswidget.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineprimitiveswidget.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/engineviewwidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/QWidget:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineviewwidget.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineviewwidget.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineprimitiveswidget.cpp:30: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 95%] Linking CXX shared module ../../../../lib64/inputfileextension.so [ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/flattabwidget.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/QObject:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/flattabwidget.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/flattabwidget.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/enginelistview.cpp:26: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/glgraphicsview.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qmetatype.h:45, from /usr/include/qt4/QtGui/qgraphicsview.h:45, from /usr/include/qt4/QtGui/QGraphicsView:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/glgraphicsview.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/glgraphicsview.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 95%] Built target inputfileextension [ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/importdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/avogadro/src/ui_importdialog.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/importdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/importdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 95%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/glwidget.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/glwidget.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/engineviewwidget.cpp:30: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/main.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/main.cpp:27: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/mainwindow.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/plugin.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/extension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/dockextension.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/mainwindow.cpp:24: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 95%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/main.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/python2.7/Python.h:19, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/main.cpp:1: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/mainwindow.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/importdialog.cpp:27: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/mainwindow.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/main.cpp:51: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/pluginitemmodel.cpp.o [ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/pluginsettings.cpp.o [ 95%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/pluginlistview.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/pluginmanager.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/pluginitemmodel.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/pluginitemmodel.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/pluginmanager.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/pluginlistview.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/pluginlistview.cpp:23: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/pluginmanager.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/pluginlistview.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/pluginsettings.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/pluginsettings.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/primitiveitemmodel.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/qabstractitemmodel.h:45, from /usr/include/qt4/QtCore/QAbstractItemModel:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/primitiveitemmodel.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/primitiveitemmodel.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/primitivetreeview.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtGui/qwindowdefs.h:45, from /usr/include/qt4/QtGui/qwidget.h:46, from /usr/include/qt4/QtGui/qframe.h:45, from /usr/include/qt4/QtGui/qabstractscrollarea.h:45, from /usr/include/qt4/QtGui/qabstractitemview.h:45, from /usr/include/qt4/QtGui/qtreeview.h:45, from /usr/include/qt4/QtGui/QTreeView:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/primitivetreeview.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/primitivetreeview.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 96%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projecttreeeditor.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeeditor.h:47, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeeditor.cpp:26: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 96%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/mesh.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/mesh.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 97%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/meshgenerator.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/meshgenerator.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/primitivetreeview.cpp:29:0: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projecttreeitem.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeitem.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeitem.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projecttreemodel.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodel.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodel.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 97%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/molecule.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/molecule.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeitem.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodel.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodeldelegate.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeeditor.h:48, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeeditor.cpp:26: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projecttreemodeldelegate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodeldelegate.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodeldelegate.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeitem.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeitem.cpp:25: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeitem.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodel.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodeldelegate.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodeldelegate.cpp:22: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/savedialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qchar.h:45, from /usr/include/qt4/QtCore/qstring.h:45, from /usr/include/qt4/QtCore/qdir.h:45, from /usr/include/qt4/QtGui/qfiledialog.h:45, from /usr/include/qt4/QtGui/QFileDialog:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/savedialog.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/savedialog.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/settingsdialog.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qatomic.h:45, from /usr/include/qt4/QtCore/qvariant.h:45, from /usr/include/qt4/QtCore/QVariant:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/avogadro/src/ui_settingsdialog.h:12, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/settingsdialog.h:28, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/settingsdialog.cpp:25: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 97%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/atomdelegate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/atomdelegate.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/atomdelegate.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/mainwindow.h:33, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/savedialog.cpp:23: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 97%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/moleculefile.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/moleculefile.cpp:3: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeitem.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodel.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreemodeldelegate.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projecttreeeditor.h:48, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/settingsdialog.cpp:27: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/bonddelegate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/bonddelegate.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/bonddelegate.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 98%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/moleculelist.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/python2.7/Python.h:19, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/moleculelist.cpp:1: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/mesh.h:30:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/meshgenerator.cpp:5: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/labeldelegate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/labeldelegate.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/labeldelegate.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 98%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/navigate.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/navigate.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/../projecttreeitem.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/../projecttreemodel.h:30, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/../projecttreemodeldelegate.h:27, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/labeldelegate.h:26, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/labeldelegate.cpp:22: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/moleculedelegate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/moleculedelegate.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/moleculedelegate.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/residuedelegate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/residuedelegate.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/residuedelegate.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/projectdelegates/selectiondelegate.cpp.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/include/qt4/QtCore/qnamespace.h:45, from /usr/include/qt4/QtCore/qobjectdefs.h:45, from /usr/include/qt4/QtCore/qobject.h:47, from /usr/include/qt4/QtCore/qtranslator.h:45, from /usr/include/qt4/QtCore/QTranslator:1, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/global.h:29, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/selectiondelegate.h:25, from /usr/src/RPM/BUILD/avogadro-1.2.0/avogadro/src/projectdelegates/selectiondelegate.cpp:22: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 98%] Building CXX object avogadro/src/CMakeFiles/avogadro-app.dir/qrc_avogadro.cxx.o In file included from /usr/include/c++/5/x86_64-alt-linux/bits/os_defines.h:39:0, from /usr/include/c++/5/x86_64-alt-linux/bits/c++config.h:482, from /usr/include/c++/5/utility:68, from /usr/include/c++/5/algorithm:60, from /usr/include/qt4/QtCore/qglobal.h:68, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/avogadro/src/qrc_avogadro.cxx:9: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 98%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/neighborlist.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/neighborlist.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 98%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/painter.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/painter.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 98%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/painterdevice.cpp.o [ 98%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/periodictableview.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/painterdevice.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/periodictableview.cpp:3: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 98%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/plugin.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/plugin.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 99%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/pluginmanager.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/pluginmanager.cpp:3: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 99%] Linking CXX executable ../../bin/avogadro make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 99%] Built target avogadro-app [ 99%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/primitive.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/primitive.cpp:3: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 99%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/primitivelist.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/primitivelist.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 99%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/qlist.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/qlist.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 99%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/qstring.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/python2.7/Python.h:19, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/qstring.cpp:1: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/painter.h:33:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/painter.cpp:4: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 99%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/residue.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/residue.cpp:2: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [ 99%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/sip.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/sip.cpp:1: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/primitive.cpp:5:0: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 99%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/std_vector.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/std_vector.cpp:3: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/primitivelist.cpp:4:0: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [ 99%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/swig.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/swig.cpp:1: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ [100%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/tool.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/boost/python/detail/wrap_python.hpp:61, from /usr/include/boost/python/detail/prefix.hpp:13, from /usr/include/boost/python/args.hpp:8, from /usr/include/boost/python.hpp:11, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/tool.cpp:3: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitivelist.h:29:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/engine.h:37, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/pluginmanager.cpp:8: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [100%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/toolgroup.cpp.o In file included from /usr/include/limits.h:25:0, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:168, from /usr/lib64/gcc/x86_64-alt-linux/5/include/syslimits.h:7, from /usr/lib64/gcc/x86_64-alt-linux/5/include/limits.h:34, from /usr/include/python2.7/Python.h:19, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/toolgroup.cpp:1: /usr/include/features.h:148:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^ In file included from /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/atom.h:31:0, from /usr/src/RPM/BUILD/avogadro-1.2.0/libavogadro/src/python/qlist.cpp:8: /usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux/libavogadro/include/avogadro/primitive.h:42:23: warning: 'Avogadro::FALSE_ID' defined but not used [-Wunused-variable] const unsigned long FALSE_ID = std::numeric_limits::max(); ^ [100%] Linking CXX shared module ../../../lib64/Avogadro.so make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [100%] Built target python-module make[1]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' + popd ~/RPM/BUILD/avogadro-1.2.0 + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.42590 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/avogadro-buildroot + : + /bin/rm -rf -- /usr/src/tmp/avogadro-buildroot + cd avogadro-1.2.0 + __kde_install + make -C BUILD-x86_64-alt-linux DESTDIR=/usr/src/tmp/avogadro-buildroot install make: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[1]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 0%] Built target elementcolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 0%] Built target bsdyengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 1%] Built target navigatetool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 19%] Built target avogadro make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 20%] Built target cartoonengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 21%] Built target axesengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 21%] Built target stickengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 21%] Built target forceengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 21%] Built target ringengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 22%] Built target sphereengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 23%] Built target hbondengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 24%] Built target dipoleengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 25%] Built target wireengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 26%] Built target polygonengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 26%] Built target qtaimengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 26%] Built target simplewireengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 27%] Built target ribbonengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 28%] Built target surfaceengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 29%] Built target labelengine make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 30%] Built target selectrotatetool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Built target bondcentrictool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 31%] Built target autorotatetool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 32%] Built target drawtool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 33%] Built target manipulatetool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 34%] Built target autoopttool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 35%] Built target clickmeasuretool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 35%] Built target aligntool make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 36%] Built target insertfragmentextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 37%] Built target insertdnaextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 37%] Built target selectextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 38%] Built target cartesianextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 39%] Built target shaderextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 39%] Built target hydrogensextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 40%] Built target gl2psextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 41%] Built target pythonterminal make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 42%] Built target vrmlextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 43%] Built target propextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 44%] Built target insertpeptideextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 44%] Built target h2methylextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 44%] Built target invertchiralextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Built target forcefieldextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Built target networkfetchextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 46%] Built target molecularpropextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 47%] Built target animationextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 48%] Built target povrayextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 49%] Built target fileimportextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 50%] Built target supercellextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 52%] Built target msym make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 53%] Built target symmetryextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 55%] Built target spglib make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 59%] Built target crystallographyextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 60%] Built target vibrationextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 64%] Built target spectraextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 66%] Built target OpenQube make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 67%] Built target surfaceextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 70%] Built target orbitalextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 70%] Built target qube make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 71%] Built target tubegen make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 72%] Built target swcntbuilderextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 73%] Built target qtaimextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 78%] Built target inputfileextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 80%] Built target gamessextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 81%] Built target orcaextension make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 82%] Built target residuecolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 83%] Built target atomindexcolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 83%] Built target smartscolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 83%] Built target chargecolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 83%] Built target distancecolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 83%] Built target customcolor make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [ 87%] Built target python-module make[2]: Entering directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' make[2]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' [100%] Built target avogadro-app make[1]: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' Install the project... -- Install configuration: "Release" -- Installing: /usr/src/tmp/avogadro-buildroot/usr/lib64/avogadro/AvogadroConfig.cmake -- Installing: /usr/src/tmp/avogadro-buildroot/usr/lib64/avogadro/AvogadroConfigVersion.cmake -- Installing: /usr/src/tmp/avogadro-buildroot/usr/lib64/avogadro/AvogadroUse.cmake -- Installing: /usr/src/tmp/avogadro-buildroot/usr/lib64/avogadro/cmake/FindEigen3.cmake -- Installing: /usr/src/tmp/avogadro-buildroot/usr/lib64/avogadro/cmake/FindGLEW.cmake -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/water.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/proprane-2-thiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/proprane-1-thiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/pentane-1-thiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/octane-1-thiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/methanethiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/hexane-1-thiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/heptane-1-thiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/ethanethiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/ethane-1_2-dithiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/butane-1-thiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/R_butane-2-thiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/thiols/2-methylproprane-2-thiol.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/sulfoxides -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/sulfoxides/dimethyl_sulfoxide.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/steroids -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/steroids/testosterone.cml -- 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Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/piperazine.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/methylamine.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/ethylamine.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/dimethylamine.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/diethylamine.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/azepane.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/ammonia.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/S-sec-butylamine.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/2-aminopropane.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amines/1H-azepine.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amides -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amides/oxamide.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amides/ethyl_carbamate.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amides/acetamide.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amides/N_N-dimethylformamide.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/amides/N_N-dimethylacetamide.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkynes -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkynes/propyne.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkynes/acetylene.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes -- Installing: 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Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes/E-hex-3-ene.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes/E-hex-2-ene.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes/E-hept-3-ene.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes/E-hept-2-ene.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes/E-but-2-ene.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes/3Z_3-ethylhepta-1_3-diene.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes/3Z-penta-1_3-diene.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes/3E-penta-1_3-diene.cml -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/avogadro/fragments/alkenes/2-methylbuta-1_3-diene.cml -- Installing: 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/usr/src/tmp/avogadro-buildroot/usr/share/pixmaps/avogadro-icon.png -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/man/man1/avogadro.1 -- Installing: /usr/src/tmp/avogadro-buildroot/usr/share/man/man1/avopkg.1 make: Leaving directory `/usr/src/RPM/BUILD/avogadro-1.2.0/BUILD-x86_64-alt-linux' + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/avogadro-buildroot (auto) mode of './usr/lib64/python2.7/site-packages/Avogadro.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libavogadro_OpenQube.so.0.1.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libavogadro.so.1.2.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/colors/smartscolor.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/colors/customcolor.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/colors/distancecolor.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/colors/chargecolor.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/colors/atomindexcolor.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/colors/residuecolor.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/orcaextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/gamessextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/inputfileextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/qtaimextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/swcntbuilderextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/orbitalextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/surfaceextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/spectraextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/vibrationextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/crystallographyextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/symmetryextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/gl2psextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/networkfetchextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/supercellextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/shaderextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/fileimportextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/vrmlextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/povrayextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/animationextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/pythonterminal.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/h2methylextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/insertdnaextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/insertpeptideextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/insertfragmentextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/selectextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/invertchiralextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/hydrogensextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/forcefieldextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/molecularpropextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/cartesianextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/extensions/propextension.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/tools/aligntool.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/tools/autorotatetool.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/tools/manipulatetool.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/tools/autoopttool.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/tools/selectrotatetool.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/tools/clickmeasuretool.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/tools/bondcentrictool.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/tools/drawtool.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/qtaimengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/simplewireengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/dipoleengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/axesengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/surfaceengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/polygonengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/ringengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/cartoonengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/ribbonengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/stickengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/sphereengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/forceengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/hbondengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/wireengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/avogadro/engines/labelengine.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/avogadro-buildroot (binconfig,pkgconfig,libtool,desktop) Compressing files in /usr/src/tmp/avogadro-buildroot (auto) Adjusting library links in /usr/src/tmp/avogadro-buildroot ./usr/lib: ./usr/lib64: libavogadro.so.1 -> libavogadro.so.1.2.0 libavogadro_OpenQube.so.0 -> libavogadro_OpenQube.so.0.1.0 Verifying ELF objects in /usr/src/tmp/avogadro-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Bytecompiling python modules in /usr/src/tmp/avogadro-buildroot using /usr/bin/python2.7 Bytecompiling python modules with optimization in /usr/src/tmp/avogadro-buildroot using /usr/bin/python2.7 -O Hardlinking identical .pyc and .pyo files Processing files: avogadro-1.2.0-alt3.M80P.1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.56856 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd avogadro-1.2.0 + DOCDIR=/usr/src/tmp/avogadro-buildroot/usr/share/doc/avogadro-1.2.0 + export DOCDIR + rm -rf /usr/src/tmp/avogadro-buildroot/usr/share/doc/avogadro-1.2.0 + /bin/mkdir -p /usr/src/tmp/avogadro-buildroot/usr/share/doc/avogadro-1.2.0 + cp -prL AUTHORS /usr/src/tmp/avogadro-buildroot/usr/share/doc/avogadro-1.2.0 + chmod -R go-w /usr/src/tmp/avogadro-buildroot/usr/share/doc/avogadro-1.2.0 + chmod -R a+rX /usr/src/tmp/avogadro-buildroot/usr/share/doc/avogadro-1.2.0 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Bd3Jj1 find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.dOR0EG find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) python.req: /usr/src/tmp/avogadro-buildroot/usr/share/libavogadro/engineScripts/wireframe.py: hiding Avogadro, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/avogadro-buildroot/usr/share/libavogadro/extensionScripts/example.py: hiding Avogadro, which SEEMS TO BE SELF-SATISFIED find-requires: FINDPACKAGE-COMMANDS: awk cat cp grep mkdir mv rm sed Provides: python2.7-module-Avogadro = 1.2.0-alt3.M80P.1, python2.7(Avogadro) Requires: python-module-sip = 4.19.3, python = 2.7, /bin/sh, /lib64/ld-linux-x86-64.so.2, /usr/lib64/python2.7/site-packages, coreutils, gawk, grep, libGL.so.1()(64bit) >= set:ojdsnGK2eBs2HRA1F5dLxigigy9yxYl6opL9ROdoA6naDqMXqixjUgjqxxUXcN57EvVQZeVxAKvx5BwrTB, libGLEW.so.2.0()(64bit) >= set:pkRmNDeaJW1NueAZp4pZePJk6aZs6EpktoW4V8MP6IsPKHDol1Zwn84, libGLU.so.1()(64bit) >= set:ji1t2, libQtCore.so.4()(64bit) >= set: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, libQtGui.so.4()(64bit) >= set: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, libQtNetwork.so.4()(64bit) >= set:ol3geCbFHtnoPFbQtlZLRI, libQtOpenGL.so.4()(64bit) >= set:njHIjT2tZl60R0qX7bHsB51rUeUYsoME3, libX11.so.6()(64bit) >= set:on6dV6, libavogadro.so.1()(64bit) >= set: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, libavogadro_OpenQube.so.0()(64bit) >= set:lh3pFq6PeIBnkO2fueYQHAdf0Gj3bcnB0OKT7y1, libboost_python.so.1.58.0()(64bit) >= set:ngHjLOu02wVRxEam3uxBa8bTNcfx7HosZmEzIoneE9Qs5CQZs50Rb17WvmoxQAO6GyWwB84M6Mg4UGOWibZ05S44AXnIwF7s38Wiy29AQZbHNKUCN1yefHwykNZq099gQcS7eZwxx47dw5A2k2Ulb6U5UWkbFDjmqRx9uic60KKb, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libc.so.6(GLIBC_2.7)(64bit), libgcc_s.so.1(GCC_3.0)(64bit), libgcc_s.so.1(GCC_4.0.0)(64bit), libm.so.6(GLIBC_2.2.5)(64bit), libopenbabel.so.4()(64bit) >= set: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, libpython2.7.so.1.0()(64bit) >= set:oi5wsXV12dBy5e9eFUMQZKgT0rrZem1YAxkMTi0OHuaPIQdmvHnphvKQ1Xi46rKvevUyzF24GxLgp2psip7mey1JSJnIgjes9xg0YFF6tEs0pWVmKMg08t3UPHnHZLKCCABrY7Or1E8W1, libstdc++.so.6(CXXABI_1.3)(64bit), libstdc++.so.6(GLIBCXX_3.4)(64bit), libstdc++.so.6(GLIBCXX_3.4.11)(64bit), libstdc++.so.6(GLIBCXX_3.4.15)(64bit), libstdc++.so.6(GLIBCXX_3.4.20)(64bit), libstdc++.so.6(GLIBCXX_3.4.21)(64bit), libstdc++.so.6(GLIBCXX_3.4.9)(64bit), libz.so.1()(64bit) >= set:kgb6dgb5xDXOJQqJmazgXbkhtZF0, python2.7(PyQt4), rtld(GNU_HASH), rtld(GNU_UNIQUE), sed Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.vcF8ti Creating avogadro-debuginfo package Processing files: libavogadro1-1.2.0-alt3.M80P.1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.FiPsc2 find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) lib.prov: /usr/src/tmp/avogadro-buildroot/usr/lib64/libavogadro.so.1: 1363 symbols, 21 bpp warning: hash collision: _ZN8Avogadro10DockWidget11qt_metacastEPKc _ZN8Avogadro6CameraD2Ev Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.dPMPEO find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Provides: libavogadro.so.1()(64bit) = set:od7fgymJWzV7ArCUjVvWHp99TsGcf3Y2xF3F5K5NIZe4GFizxFkIcwQ2eJsf3pHAyHOlJDPBa4DOFTQw42c4AZpR8OtaelqwZ1ce5ey3QQMZ2edrjFLm3ZKNZuo8V95U5DuqQNEwVZ1kSvy7IAFSHouIq9wRB5xU9WfNZylIKq6hGqF5jzM7ygupdEFgj3mxSYP4R2zDCP4MldZollta0al94ESxVUZzKfWuG2PdYIs9ltipT9WxiM5uSOyepeACebx3JTVOro1ZxEHCBdYK6C1KOX6faGsyfavUEO9FOcuQ43DDOEhWb8d0ftf8uTV9gOH5MD8HuWM0Rrvh1pFzwjwkNpreJuV5jGV4mnLy0FgH9aGYg4wZw6sKKUsFSulUbkZAcKZvE4Am7fR8A7b9d926SyA4vSZg8KtgK3t5ZjooEKYZe5W85HW7ZjjLKlqQlO8W6tZoE4W1Wkeb9NksdjvqMz0KrV0dZJbauN96NWJffwRc9nd7KyYy43BeMx0ZBMniBY7I9wW1yjR8gyzZFsPtzICZ3kQWJsnf6ZifqI89fIZpgaHlaEthZu7nDVsxKRZ4O34wm3x3nnpOAWgWlur6bQRZngONJMZDOKtwxeKgwBA7OxOd0kxc2ZhEa49UCiQpm4RZmZuFZdIgNE7lesvx2OZlFXvPA7Un4ObbCQhMpV8iWrjfOxxrOu8hVuRwNAZgbCX9uBSqZ3aHaca74gPlwuBOTyvQL7ULQYmZ3Z0YNP18QURlxavGaiCE1sHM4fuELyQzhpv8FY4t5QEF1VFckg9ByjGAAAos8pHYygB1AhencKl1vtSOrrgtG544Ful3vggNOZnfKPH1vtCTuwFQoLCsxH88YgZrKDlsZbwpZ2aJJ8nfhdIymgzUpmkGSAY4JLwZ8Q7ekDvCpW15yigUHiUOFwt1YqoQp9ZHNZBu9ngMnjqOHYKgCnT4XHSEFhRwAHZ6eYwzPqgzuGJeoNyLe3D0iKnR7OKxNUSid586ocpXEooQoT4XzPMKQ4ISC8admlrNaOGQDwJncwmwYXZm8ZpUaabB9W1lb0g5BVaZ0Mz0SacBxja1fweZpba5KEpFo1OK1Sbpp5Z40Ov8LUCkv4VYjOMtVW1U682cIsQvGn1pSSZF9LXrMmpIGqwKx546gnD0rG4CZ5rkDoZ1AL0a4jb4DuCGBYryMC3KQdiuNplTtlLMr2UpBX4tEjFV8Z874y4aJZqrU6gDdZvEeQAwpnyCI5u642eAAaa785pxzk1TQr2czvsLFcyeeAbtGAzRSsUM5hnebc0P5Y183ZwpXPr0memq2kwZj2dPhDAF2wHrThqhCJwUZmhZGwXdvgRdieSKEvaEl7xZ643r8NleHz4j6lZCszQP2d4VZbzCZr8OhGyZj2WXR1gKztaPgxaZ7TMf2Adus7YV6hmAnTlGy6T7KtNiz9r8dcOQ0O5DLXNKClsincFuVBkh5vjbL0v4LTShGZEHAXHhVZJqvOdWxKDILHrZLVhsCJLC3TNPnpsgFsqZza7uAJeZKZl7kIRAyiLjCUBAluzJhTU0m82o7PjeZeGSRkMeJ4xo3vmZ76CkEQcZlVM2nnN0YwUE5p0VZ7jvPihfjYNyXmCXeLbDNO2bPm2EIcrGyfegwuPgRIxDnFF8ckT3RrX2Du5QSW3VJgo6JY6d8RjLQOAz32lwSxubag9F7XTv9WvJnwZnEfjxaBhxEoVxa7OHWJBC4ny0znfEu2KQPsa5gG9w8Z06jC4xamSHxxpvXISrOO016VIRw17nd4VgINSVcqxJjBAOg1sb9n3tjoHZDswAZAnxStG0cVnvII0tEoQPq0UlGWxcPnIazG8cpsIfmhrQYUuaplfKAaHF11DULQA5It7cSxkAYiz9djWGMVA8YhJAyzZojbKrl6sjQ6kZdBE4rvRoEfaQLv0f90g06z8epZIOfZde4G6R9c1Seh07ZGcSk4C3fPcfDChZe0IVoSA3ZAFwC90l5FrhMpPbz8lPCdy37LHSNZpsPZiLOPhEzjIdbr6ueWeoEHY8ksDjWAGZg200FxbsjHsXh6PDP6a8eGB7wtC3sbpRYKhwkwFIFU4lPzsgXaWNeHUX9vRKYG3FGn2YSsqc2aUh03GRbT7XUle9zXHGQmluA7V7zYA2eK60lDhes98ZbhPH74gVFKbB4uZoc5RmC9Zo0XFrrPWGOZgPDGqNrf860Ddlzklt2X4MHDzzwK9NyZfX3VIKi6L7AUyVxS2TaMjA0oGPV9MRZ4tuG9zHzx8BOuTOCSwQXFBl2FvI2Olr67UTzOVRETt856Zj6OjbBTB4nJSlpYjOJQpP18U8PMOpU8eZhpJM06Wk1cFx7y9RMgCmisgzZd5Nqowj19n05YowS8JPOyhczCdLUly7Ob4mgZbDGK7Zzag9MHhw0SlIdW3hsSJl4k3bmC49QyiDHPUujFYotxeJGjXyH3AqwGmMgHMe6NF4PmUnSRGHzauWd1YdWz0u8AiWEeGDCIZjACbUdg4go9uXq9SF19YFABrdwlaH5xXcB9aIP37LwZ0VU3ycA5MN971uIcjgPTZwD0GS4Sg1ZnD8QKm9x4nw2kBYLTT0eg68pWSOyw4SOTQVLAat7Io4cvzZ2NZ8IAtAJVd7gVM7Qrnz6cQ0uu0a8X3q0oiwVTGlapfZ1dZ7Hb3lYOZArperUlZ8MypJWWJxYxJoPL0UyEcr9JyiDYJZkwAsJh3HPFBjG6ZLSKosbiAoDRGzej4c8UbSaqXLSnSIH66FDHMyuCrycCCXRSd2 Requires: libGL.so.1()(64bit) >= set:oh2JGS2V5S00dVwa1I0oE7h7G2iJ0HVwzASR9aPOnPr90mhuze9O3JHpKRZtCpkztZ1Fk1dLvGpPC2afOCyzoUnpAulFDNed117aHzMZfubn6cioICS2byGblHhW0t2AJ0mEppYj1coyVqrthD7HZJTSaNedxR8yTVvJwd4rNtZjPuhe423QT4Ef25U26B2JX2NYy3NriwW08, libGLEW.so.2.0()(64bit) >= set:pmRmNsuTx9MPpG2p2Xd4, libGLU.so.1()(64bit) >= set:jf2WUMPfJY5WZIE33e5g2IEA9Y, libQtCore.so.4()(64bit) >= set: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, libQtGui.so.4()(64bit) >= set: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, libQtOpenGL.so.4()(64bit) >= set:niTxS9gTk5x2JvhvPg628cZhe5BGiZdZ6CvsYh0nZISTEpQGoOcmz1RWjX0p79a2IkovyAiG72Zu0, libboost_python.so.1.58.0()(64bit) >= set:niHjPaZcUI82D4l1RJP2QqkuZCBe1YYO1LHzYd921iHhqZ0Uhaz5471ZHHNKUqH4tUZ6UfYnL, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libgcc_s.so.1(GCC_3.0)(64bit), libm.so.6(GLIBC_2.2.5)(64bit), libopenbabel.so.4()(64bit) >= set:piPkusLrsFDZFIScJkXGOmxHsZDcOshEzSOOHpngQJbmDirDurmaW9UQb0BcR4C4VBBH98BITwv5npOVBCgopKS1ZECmTZeOGID7Es6HvzcBbkf02UkYwNZpZguIKZmYU3Sg93yP4ZgUmG8FKVaqB6FJahBoUr1MG1PcV0oLyOer547UEo0eENaDtKtKD0hMXobIvFHmcvwZr4RAilK4aNEAngFuh7VjICpBKPjLCdP2LRCecz0rYQStfhyZoH0, libpython2.7.so.1.0()(64bit) >= set:okAbzcxjYZfnYMZKxdGQ6D62GjSkhi9942dKi6zspTp0, libstdc++.so.6(CXXABI_1.3)(64bit), libstdc++.so.6(GLIBCXX_3.4)(64bit), libstdc++.so.6(GLIBCXX_3.4.11)(64bit), libstdc++.so.6(GLIBCXX_3.4.20)(64bit), libstdc++.so.6(GLIBCXX_3.4.21)(64bit), rtld(GNU_HASH), rtld(GNU_UNIQUE) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.poNGxG Creating libavogadro1-debuginfo package Processing files: libavogadro-openqube0-1.2.0-alt3.M80P.1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.v0SJeB find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) lib.prov: /usr/src/tmp/avogadro-buildroot/usr/lib64/libavogadro_OpenQube.so.0: 191 symbols, 18 bpp Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.vB9iGy find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Provides: libavogadro_OpenQube.so.0()(64bit) = set:ldXtrEnFGFdNW8Cp7Kz55MeQGLBdMdfuaGohLpIYy0nurNuhhnNHghc3vqItVyAzzeARP9eFUGyISlDeqeSOx1MeGsxcxdUiIStHFZtquAwCwb1ZBOYTGYnTeZFbRIgezyZzfw0mTzPayeT3ZFQcbJMyUbKPEAB74H9ZG14ZoSAyvCuGZLxBlQfqn5JVRaLZ56Ma5Xy4IVe22F47jypioGiijwKBY6BxZpQjZDLzG2oHGZuMIgsbHst4WNBgOYa0Zp51qeSrxYs7ZiNMbeExz6f8bgwtcM4CpHIYhi02rJ5jTtWII958LoCFBZvMdoX3Fau87enOHCLiy8VwqiWfVc2lxuAb2PM7ZJyEkAMjKEn1dx4avkIJar7DVAX1JntlP4 Requires: libQtCore.so.4()(64bit) >= set:piFO8R3gJgBJNZqrbiBKCIIJeewvZsSqtdwLz4PgRWhUQULr6vtNjh03RH4AUe5sZgcpOjK6EbQKOFFaJPgLCagg9YuMmr173EEh9x5ewEIQtoRsG7z61CllF8vMvAZ3Ip0J0ErMgsclh8R57l81iUlCI8DfxtCUYZjcUVVki03NZ2j80NeqnEnxVZEQ2uDOo9qR7lUdjE4g64QHMSZso1ws1Ci6mEX7a786QIZJRYGMjzc764PhzLVjv7wwl8WiW3HbiMGgAeJfqqZgspPTJCGhh965uOz0Nn2F7qLuYM3Un7ppjgzfe5yNThJ1iz1dVKtHhG4XhEVj1AzsDzNV2sg6, libQtGui.so.4()(64bit) >= set:roCzGLKZfQbwwyX8diEEiEYZ40, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libgcc_s.so.1(GCC_3.0)(64bit), libm.so.6(GLIBC_2.2.5)(64bit), libstdc++.so.6(CXXABI_1.3)(64bit), libstdc++.so.6(GLIBCXX_3.4)(64bit), libstdc++.so.6(GLIBCXX_3.4.11)(64bit), libstdc++.so.6(GLIBCXX_3.4.20)(64bit), libstdc++.so.6(GLIBCXX_3.4.21)(64bit), libstdc++.so.6(GLIBCXX_3.4.9)(64bit), rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.nCVWRy Creating libavogadro-openqube0-debuginfo package Processing files: avogadro-devel-1.2.0-alt3.M80P.1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.3uGXNB find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.96dpzH find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/atom.h:31: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/atom.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/atom.h:31: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/atom.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/bond.h:31: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/bond.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/bond.h:31: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/bond.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/cube.h:29: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/cube.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/cube.h:29: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/cube.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/mesh.h:30: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/mesh.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/mesh.h:30: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/mesh.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/tool.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/tool.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/tool.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/tool.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/color.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/color.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/color.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/color.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/glhit.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/glhit.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/glhit.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/glhit.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/camera.h:35:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/camera.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/camera.h:35:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/camera.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/engine.h:29:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/engine.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/engine.h:29:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/engine.h: cpp failed /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h: cpp failed, trying c++ mode /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/idlist.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/idlist.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/idlist.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/idlist.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plugin.h:29:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plugin.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plugin.h:29:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plugin.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painter.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painter.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painter.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painter.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/protein.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/protein.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/protein.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/protein.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/fragment.h:28, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/residue.h:29: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/residue.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/fragment.h:28, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/residue.h:29: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/residue.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/zmatrix.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/zmatrix.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/zmatrix.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/zmatrix.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/fragment.h:28: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/fragment.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/fragment.h:28: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/fragment.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/glwidget.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/glwidget.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/glwidget.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/glwidget.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/molecule.h:29: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/molecule.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/molecule.h:29: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/molecule.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/navigate.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/navigate.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/navigate.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/navigate.h: cpp failed /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotaxis.h:32:26: fatal error: QtCore/QString: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotaxis.h: cpp failed, trying c++ mode /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotaxis.h:32:26: fatal error: QtCore/QString: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotaxis.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/animation.h:29:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/animation.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/animation.h:29:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/animation.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plugin.h:29:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/extension.h:28: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/extension.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plugin.h:29:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/extension.h:28: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/extension.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotpoint.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotpoint.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotpoint.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotpoint.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h: cpp failed /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/toolgroup.h:28:19: fatal error: QObject: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/toolgroup.h: cpp failed, trying c++ mode /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/toolgroup.h:28:19: fatal error: QObject: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/toolgroup.h: cpp failed /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/dockwidget.h:21:29: fatal error: QtGui/QDockWidget: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/dockwidget.h: cpp failed, trying c++ mode /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/dockwidget.h:21:29: fatal error: QtGui/QDockWidget: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/dockwidget.h: cpp failed /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotobject.h:32:26: fatal error: QtCore/QString: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotobject.h: cpp failed, trying c++ mode /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotobject.h:32:26: fatal error: QtCore/QString: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotobject.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotwidget.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotaxis.h:32:26: fatal error: QtCore/QString: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotwidget.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotwidget.h:32:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotaxis.h:32:26: fatal error: QtCore/QString: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plotwidget.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/colorbutton.h:31:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/colorbutton.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/colorbutton.h:31:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/colorbutton.h: cpp failed /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/obeigenconv.h:24:36: fatal error: openbabel/math/vector3.h: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/obeigenconv.h: cpp failed, trying c++ mode /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/obeigenconv.h:24:36: fatal error: openbabel/math/vector3.h: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/obeigenconv.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythonerror.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythonerror.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythonerror.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythonerror.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/moleculefile.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/moleculefile.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/moleculefile.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/moleculefile.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/molecule.h:29, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/neighborlist.h:30: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/neighborlist.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitive.h:31:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/molecule.h:29, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/neighborlist.h:30: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/neighborlist.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythonscript.h:29:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythonscript.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythonscript.h:29:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythonscript.h: cpp failed /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/undosequence.h:28:24: fatal error: QUndoCommand: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/undosequence.h: cpp failed, trying c++ mode /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/undosequence.h:28:24: fatal error: QUndoCommand: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/undosequence.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plugin.h:29:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/extension.h:28, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/dockextension.h:28: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/dockextension.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/plugin.h:29:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/extension.h:28, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/dockextension.h:28: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/dockextension.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/meshgenerator.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/meshgenerator.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/meshgenerator.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/meshgenerator.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painter.h:32:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painterdevice.h:28: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painterdevice.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painter.h:32:0, from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painterdevice.h:28: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/painterdevice.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pluginmanager.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pluginmanager.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pluginmanager.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pluginmanager.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitivelist.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitivelist.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitivelist.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/primitivelist.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/textmatrixeditor.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/textmatrixeditor.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/textmatrixeditor.h:30:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/textmatrixeditor.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/elementtranslator.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/elementtranslator.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/elementtranslator.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/elementtranslator.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/periodictableview.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/periodictableview.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/periodictableview.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/periodictableview.h: cpp failed In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythoninterpreter.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythoninterpreter.h: cpp failed, trying c++ mode In file included from /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythoninterpreter.h:28:0: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/global.h:29:30: fatal error: QtCore/QTranslator: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/avogadro-buildroot/usr/include/avogadro/pythoninterpreter.h: cpp failed Provides: pkgconfig(avogadro) = 1.2.0 Requires: libavogadro1 = 1.2.0-alt3.M80P.1, /usr/lib64/libavogadro.so.1, /usr/lib64/libavogadro_OpenQube.so.0, /usr/lib64/pkgconfig Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Bg5J4P Processing files: avogadro-debuginfo-1.2.0-alt3.M80P.1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.FXJyk2 find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.r7B3Ih find-requires: running scripts (debuginfo) Requires: avogadro = 1.2.0-alt3.M80P.1, /usr/lib/debug/lib64/ld-linux-x86-64.so.2.debug, debug64(libGL.so.1), debug64(libGLEW.so.2.0), debug64(libGLU.so.1), debug64(libQtCore.so.4), debug64(libQtGui.so.4), debug64(libQtNetwork.so.4), debug64(libQtOpenGL.so.4), debug64(libX11.so.6), debug64(libavogadro.so.1), debug64(libavogadro_OpenQube.so.0), debug64(libboost_python.so.1.58.0), debug64(libc.so.6), debug64(libgcc_s.so.1), debug64(libm.so.6), debug64(libopenbabel.so.4), debug64(libpython2.7.so.1.0), debug64(libstdc++.so.6), debug64(libz.so.1) Processing files: libavogadro1-debuginfo-1.2.0-alt3.M80P.1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.dnHTDT find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.dSSpjy find-requires: running scripts (debuginfo) Provides: debug64(libavogadro.so.1) Requires: libavogadro1 = 1.2.0-alt3.M80P.1, debug64(libGL.so.1), debug64(libGLEW.so.2.0), debug64(libGLU.so.1), debug64(libQtCore.so.4), debug64(libQtGui.so.4), debug64(libQtOpenGL.so.4), debug64(libboost_python.so.1.58.0), debug64(libc.so.6), debug64(libgcc_s.so.1), debug64(libm.so.6), debug64(libopenbabel.so.4), debug64(libpython2.7.so.1.0), debug64(libstdc++.so.6) Processing files: libavogadro-openqube0-debuginfo-1.2.0-alt3.M80P.1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.xVgKNf find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.tkM51Z find-requires: running scripts (debuginfo) Provides: debug64(libavogadro_OpenQube.so.0) Requires: libavogadro-openqube0 = 1.2.0-alt3.M80P.1, debug64(libQtCore.so.4), debug64(libQtGui.so.4), debug64(libc.so.6), debug64(libgcc_s.so.1), debug64(libm.so.6), debug64(libstdc++.so.6) Adding to avogadro a strict dependency on libavogadro1 Adding to avogadro a strict dependency on libavogadro-openqube0 Adding to avogadro-devel a strict dependency on libavogadro-openqube0 Adding to avogadro-debuginfo a strict dependency on libavogadro1-debuginfo Adding to avogadro-debuginfo a strict dependency on libavogadro-openqube0-debuginfo Removing from avogadro-debuginfo 27 sources provided by libavogadro1-debuginfo Removing from avogadro-debuginfo 8 sources provided by libavogadro-openqube0-debuginfo Removing 1 extra deps from avogadro due to dependency on libavogadro1 Removing 1 extra deps from avogadro due to dependency on libavogadro-openqube0 Removing 1 extra deps from avogadro-devel due to dependency on libavogadro1 Removing 1 extra deps from avogadro-devel due to dependency on libavogadro-openqube0 Removing 1 extra deps from avogadro-debuginfo due to dependency on libavogadro1-debuginfo Removing 1 extra deps from avogadro-debuginfo due to dependency on libavogadro-openqube0-debuginfo Removing 14 extra deps from avogadro due to repentancy on libavogadro1 Removing 1 extra deps from avogadro due to repentancy on libavogadro-openqube0 Removing 13 extra deps from avogadro-debuginfo due to repentancy on libavogadro1-debuginfo warning: Installed (but unpackaged) file(s) found: /usr/lib/libmsym.a Wrote: /usr/src/RPM/RPMS/x86_64/avogadro-1.2.0-alt3.M80P.1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libavogadro1-1.2.0-alt3.M80P.1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libavogadro-openqube0-1.2.0-alt3.M80P.1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/avogadro-devel-1.2.0-alt3.M80P.1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/avogadro-debuginfo-1.2.0-alt3.M80P.1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libavogadro1-debuginfo-1.2.0-alt3.M80P.1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libavogadro-openqube0-debuginfo-1.2.0-alt3.M80P.1.x86_64.rpm 830.87user 77.81system 6:05.45elapsed 248%CPU (0avgtext+0avgdata 790668maxresident)k 0inputs+0outputs (0major+32771825minor)pagefaults 0swaps 915.70user 87.53system 8:36.48elapsed 194%CPU (0avgtext+0avgdata 790668maxresident)k 5032inputs+0outputs (0major+34245572minor)pagefaults 0swaps