<86>Apr 21 02:02:38 userdel[61713]: delete user 'rooter' <86>Apr 21 02:02:38 userdel[61713]: removed shadow group 'rooter' owned by 'rooter' <86>Apr 21 02:02:38 groupadd[61724]: group added to /etc/group: name=rooter, GID=549 <86>Apr 21 02:02:38 groupadd[61724]: group added to /etc/gshadow: name=rooter <86>Apr 21 02:02:38 groupadd[61724]: new group: name=rooter, GID=549 <86>Apr 21 02:02:38 useradd[61728]: new user: name=rooter, UID=549, GID=549, home=/root, shell=/bin/bash <86>Apr 21 02:02:38 userdel[61737]: delete user 'builder' <86>Apr 21 02:02:38 userdel[61737]: removed group 'builder' owned by 'builder' <86>Apr 21 02:02:38 userdel[61737]: removed shadow group 'builder' owned by 'builder' <86>Apr 21 02:02:38 groupadd[61748]: group added to /etc/group: name=builder, GID=550 <86>Apr 21 02:02:38 groupadd[61748]: group added to /etc/gshadow: name=builder <86>Apr 21 02:02:38 groupadd[61748]: new group: name=builder, GID=550 <86>Apr 21 02:02:38 useradd[61753]: new user: name=builder, UID=550, GID=550, home=/usr/src, shell=/bin/bash <13>Apr 21 02:02:42 rpmi: libibverbs-1.1.8-alt1 1423045776 installed <13>Apr 21 02:02:42 rpmi: librdmacm-1.0.19.1-alt2 1423057437 installed <13>Apr 21 02:02:42 rpmi: libquadmath0-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 21 02:02:42 rpmi: libgfortran3-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 21 02:02:42 rpmi: libdapl-1.2.16-alt2 1297310513 installed <13>Apr 21 02:02:42 rpmi: libidn2-2.0.4-alt3.M80P.1 1520307194 installed <13>Apr 21 02:02:42 rpmi: gcc-fortran-common-1.4.20-alt1 1432315196 installed <13>Apr 21 02:02:42 rpmi: ca-certificates-2016.02.25-alt1 1462368370 installed <13>Apr 21 02:02:42 rpmi: libcrypto10-1.0.2n-alt0.M80P.1 1512766129 installed <13>Apr 21 02:02:42 rpmi: libquadmath5-devel-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 21 02:02:42 rpmi: libgfortran5-devel-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 21 02:02:43 rpmi: gcc5-fortran-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 21 02:02:43 rpmi: libquadmath4.8-devel-4.8.2-alt5 1454584992 installed <13>Apr 21 02:02:43 rpmi: libgfortran4.8-devel-4.8.2-alt5 1454584992 installed <13>Apr 21 02:02:43 rpmi: zlib-devel-1.2.8-alt1 1371079009 installed <13>Apr 21 02:02:43 rpmi: libibcommon-1.2.0-alt2 1297310586 installed <13>Apr 21 02:02:43 rpmi: libibcommon-devel-1.2.0-alt2 1297310586 installed <13>Apr 21 02:02:43 rpmi: libibumad-1.3.6-alt2 1297311908 installed <13>Apr 21 02:02:43 rpmi: libibumad-devel-1.3.6-alt2 1297311908 installed <13>Apr 21 02:02:43 rpmi: libsz2-2.1-alt4 1300649105 installed <13>Apr 21 02:02:43 rpmi: tcsh-6.18.01-alt2 1442313244 installed <13>Apr 21 02:02:43 rpmi: rpm-macros-mpi-selector-1.0.3-alt3 1504498675 installed <13>Apr 21 02:02:43 rpmi: mpi-selector-1.0.3-alt3 1504498675 installed <13>Apr 21 02:02:43 rpmi: openmpi-1.6.4-alt2 1423058639 installed <13>Apr 21 02:02:43 rpmi: libpnetcdf-1.6.0-alt1 1426128048 installed <13>Apr 21 02:02:43 rpmi: libexpat-2.2.4-alt0.M80P.1 1503871120 installed <13>Apr 21 02:02:43 rpmi: libsysfs-2.1.0-alt8 1435686567 installed <13>Apr 21 02:02:43 rpmi: libsysfs-devel-2.1.0-alt8 1435686567 installed <13>Apr 21 02:02:43 rpmi: libibverbs-devel-1.1.8-alt1 1423045776 installed <13>Apr 21 02:02:43 rpmi: librdmacm-devel-1.0.19.1-alt2 1423057437 installed <13>Apr 21 02:02:43 rpmi: libdapl-devel-1.2.16-alt2 1297310513 installed <13>Apr 21 02:02:43 rpmi: publicsuffix-list-dafsa-20190329-alt1 p8+226349.100.1.1 1554128046 installed <13>Apr 21 02:02:43 rpmi: libpsl-0.18.0-alt0.M80P.1 1502785107 installed <13>Apr 21 02:02:43 rpmi: libnghttp2-1.8.0-alt1 1456818805 installed <13>Apr 21 02:02:43 rpmi: libverto-0.2.6-alt1_6 1455633234 installed <13>Apr 21 02:02:43 rpmi: libkeyutils-1.5.10-alt0.M80P.2 p8+216694.100.6.1 1547827915 installed <13>Apr 21 02:02:43 rpmi: libcom_err-1.42.13-alt2 1449075846 installed <13>Apr 21 02:02:43 rpmi: libbrotlicommon0-1.0.4-alt0.M80P.1 1528205024 installed <13>Apr 21 02:02:43 rpmi: libbrotlidec0-1.0.4-alt0.M80P.1 1528205024 installed <13>Apr 21 02:02:43 rpmi: libXdmcp-1.1.1-alt1 1334617699 installed <13>Apr 21 02:02:43 rpmi: libXau-1.0.8-alt1 1369565807 installed <13>Apr 21 02:02:43 rpmi: libxcb-1.12-alt2 p8.218219.300 1545313310 installed <13>Apr 21 02:02:43 rpmi: libX11-locales-3:1.6.3-alt1 1431956885 installed <13>Apr 21 02:02:43 rpmi: libX11-3:1.6.3-alt1 1431956911 installed <13>Apr 21 02:02:43 rpmi: libTraceInput-1.3.0-alt5 1340619584 installed <13>Apr 21 02:02:43 rpmi: libmpe2-1.3.0-alt5 1340619584 installed <13>Apr 21 02:02:44 rpmi: libhdf5-8-mpi-1.8.13-alt1 1401877548 installed <13>Apr 21 02:02:44 rpmi: gcc-c++-common-1.4.20-alt1 1432315196 installed <13>Apr 21 02:02:44 rpmi: libstdc++5-devel-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 21 02:02:45 rpmi: gcc5-c++-5.3.1-alt3.M80P.1 p8+225520.100.3.1 1553688800 installed <13>Apr 21 02:02:45 rpmi: openmpi-devel-1.6.4-alt2 1423058639 installed <13>Apr 21 02:02:45 rpmi: libhdf5-mpi-devel-1.8.13-alt1 1401877548 installed <13>Apr 21 02:02:45 rpmi: bc-1:1.06-alt4 1461014962 installed <13>Apr 21 02:02:45 rpmi: libexpat-devel-2.2.4-alt0.M80P.1 1503871120 installed <13>Apr 21 02:02:45 rpmi: flex-2.6.0-alt1 1449073214 installed <86>Apr 21 02:02:45 groupadd[76642]: group added to /etc/group: name=_keytab, GID=499 <86>Apr 21 02:02:45 groupadd[76642]: group added to /etc/gshadow: name=_keytab <86>Apr 21 02:02:45 groupadd[76642]: new group: name=_keytab, GID=499 <13>Apr 21 02:02:45 rpmi: libkrb5-1.14.6-alt1.M80P.1 1525355673 installed <13>Apr 21 02:02:45 rpmi: libssl10-1.0.2n-alt0.M80P.1 1512766129 installed <86>Apr 21 02:02:45 groupadd[76785]: group added to /etc/group: name=sasl, GID=498 <86>Apr 21 02:02:45 groupadd[76785]: group added to /etc/gshadow: name=sasl <86>Apr 21 02:02:45 groupadd[76785]: new group: name=sasl, GID=498 <13>Apr 21 02:02:45 rpmi: libsasl2-3-2.1.26-alt7 1479477445 installed <13>Apr 21 02:02:45 rpmi: libldap-2.4.45-alt1.M80P.1 1513980376 installed <13>Apr 21 02:02:45 rpmi: libcurl-7.64.0-alt1 p8+220788.100.1.1 1549495393 installed <13>Apr 21 02:02:45 rpmi: libnetcdf7-mpi-4.3.2-alt1 1401877742 installed <13>Apr 21 02:02:45 rpmi: libcurl-devel-7.64.0-alt1 p8+220788.100.1.1 1549495393 installed <13>Apr 21 02:02:45 rpmi: libnetcdf-mpi-devel-4.3.2-alt1 1401877742 installed Installing libnetcdff5-mpi-4.2-alt4.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.24723 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf libnetcdff5-mpi-4.2 + echo 'Source #0 (libnetcdff5-mpi-4.2.tar):' Source #0 (libnetcdff5-mpi-4.2.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/libnetcdff5-mpi-4.2.tar + cd libnetcdff5-mpi-4.2 + /bin/chmod -c -Rf u+rwX,go-w . + sed -i 's|@MPIDIR@|/usr/lib64/openmpi|' netcdf-fortran.pc.in nf-config.in + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.24723 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdff5-mpi-4.2 + mpi-selector --set openmpi + source /usr/lib64/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib64/openmpi/bin ++ PATH=/usr/lib64/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib64/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib64/openmpi/man ++ MANPATH=/usr/lib64/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + autoreconf -fisv autoreconf-default: Entering directory `.' autoreconf-default: configure.ac: not using Gettext autoreconf-default: running: aclocal --force -I m4 configure.ac:207: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:207: the top level configure.ac:207: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:207: the top level configure.ac:207: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:207: the top level configure.ac:207: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:207: the top level autoreconf-default: configure.ac: tracing configure.ac:207: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:207: the top level configure.ac:207: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:207: the top level autoreconf-default: running: libtoolize --force --install libtoolize-default: putting auxiliary files in `.'. libtoolize-default: linking file `./config.guess' libtoolize-default: linking file `./config.sub' libtoolize-default: linking file `./install-sh' libtoolize-default: linking file `./ltmain.sh' libtoolize-default: putting macros in AC_CONFIG_MACRO_DIR, `m4'. libtoolize-default: linking file `m4/libtool.m4' libtoolize-default: linking file `m4/ltoptions.m4' libtoolize-default: linking file `m4/ltsugar.m4' libtoolize-default: linking file `m4/ltversion.m4' libtoolize-default: linking file `m4/lt~obsolete.m4' autoreconf-default: configure.ac: not using Intltool autoreconf-default: configure.ac: not using gtk-doc autoreconf-default: running: /usr/bin/autoconf-2.60 --force autoreconf-default: running: /usr/bin/autoheader-2.60 --force autoreconf-default: running: automake --add-missing --force-missing configure.ac:36: warning: support for distribution archives compressed with legacy program 'compress' is deprecated. configure.ac:36: It will be removed in Automake 2.0 parallel-tests: installing './test-driver' autoreconf-default: Leaving directory `.' + CFLAGS='-pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2' + export CFLAGS + CXXFLAGS='-pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2' + export CXXFLAGS + FFLAGS='-pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2' + export FFLAGS + '[' -n '' ']' ++ printf %s '-pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS= + export ASFLAGS + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + ./configure --build=x86_64-alt-linux --host=x86_64-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --without-included-gettext --enable-shared --enable-static=no --bindir=/usr/lib64/openmpi/bin --libdir=/usr/lib64/openmpi/lib --includedir=/usr/lib64/openmpi/include configure: WARNING: unrecognized options: --without-included-gettext configure: netCDF-Fortran 4.2 checking build system type... x86_64-alt-linux-gnu checking host system type... x86_64-alt-linux-gnu checking target system type... x86_64-alt-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes configure: checking user options checking whether extra valgrind tests should be run... no checking whether parallel IO tests should be run... no checking whether netCDF extra tests should be run (developers only)... no checking whether F90 API is desired... yes checking whether fortran type sizes should be checked... yes checking whether large file (> 2GB) tests should be run... no checking whether benchmaks should be run (experimental)... no checking where to put large temp files if large file tests are run... . configure: finding C compiler checking for x86_64-alt-linux-gcc... x86_64-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-alt-linux-gcc accepts -g... yes checking for x86_64-alt-linux-gcc option to accept ISO C89... none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of x86_64-alt-linux-gcc... none checking for an ANSI C-conforming const... yes configure: finding Fortran compiler (will not be used if Fortran API is not desired) checking for x86_64-alt-linux-gfortran... x86_64-alt-linux-gfortran checking whether we are using the GNU Fortran compiler... yes checking whether x86_64-alt-linux-gfortran accepts -g... yes checking for x86_64-alt-linux-x86_64-alt-linux-gfortran... no checking for x86_64-alt-linux-gfortran... x86_64-alt-linux-gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether x86_64-alt-linux-gfortran accepts -g... yes configure: setting up Fortran 90 checking what FC is set to... x86_64-alt-linux-gfortran checking for Fortran flag to compile .f90 files... none checking fortran 90 modules inclusion flag... -I configure: setting up libtool checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-alt-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-alt-linux-gnu file names to x86_64-alt-linux-gnu format... func_convert_file_noop checking how to convert x86_64-alt-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-alt-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... (cached) pass_all checking for x86_64-alt-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-alt-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-alt-linux-strip... no checking for strip... strip checking for x86_64-alt-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from x86_64-alt-linux-gcc object... ok checking for sysroot... no checking for x86_64-alt-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-alt-linux-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-alt-linux-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-alt-linux-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-alt-linux-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-alt-linux-gcc static flag -static works... no checking if x86_64-alt-linux-gcc supports -c -o file.o... yes checking if x86_64-alt-linux-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-alt-linux-gfortran option to produce PIC... -fPIC checking if x86_64-alt-linux-gfortran PIC flag -fPIC works... yes checking if x86_64-alt-linux-gfortran static flag -static works... no checking if x86_64-alt-linux-gfortran supports -c -o file.o... yes checking if x86_64-alt-linux-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-alt-linux-gfortran option to produce PIC... -fPIC checking if x86_64-alt-linux-gfortran PIC flag -fPIC works... yes checking if x86_64-alt-linux-gfortran static flag -static works... no checking if x86_64-alt-linux-gfortran supports -c -o file.o... yes checking if x86_64-alt-linux-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: finding other utilities configure: trying to set fortran flags for this platform checking what FC is set to... x86_64-alt-linux-gfortran checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no configure: displaying some results checking for /usr/bin/nm... /usr/bin/nm -B checking nm flags... checking for C-equivalent to Fortran routine "SUB"... sub_ checking for Fortran "byte"... yes checking for Fortran "integer*2"... yes checking if Fortran "byte" is C "signed char"... yes checking if Fortran "byte" is C "short"... no checking if Fortran "byte" is C "int"... no checking if Fortran "byte" is C "long"... no checking if Fortran "integer*2" is C "short"... yes checking if Fortran "integer*2" is C "int"... no checking if Fortran "integer*2" is C "long"... no checking if Fortran "integer" is C "int"... yes checking if Fortran "real" is C "float"... yes checking if Fortran "doubleprecision" is C "double"... yes checking for Fortran-equivalent to netCDF "byte"... byte checking for Fortran-equivalent to netCDF "short"... integer*2 checking if Fortran 90 compiler capitalizes .mod filenames... no checking whether extra example tests should be run... no checking whether a win32 DLL is desired... no configure: checking types, headers, and functions checking netcdf.h usability... yes checking netcdf.h presence... no configure: WARNING: netcdf.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: netcdf.h: proceeding with the compiler's result checking for netcdf.h... yes checking for library containing nc_open... -lnetcdf checking for nc_def_opaque... yes checking for nccreate... yes checking for nc_set_log_level... no checking for oc_open... yes checking for nc_use_parallel_enabled... yes checking netCDF v2 API present... yes checking netCDF-4 present... yes checking for stdlib.h... (cached) yes checking for sys/types.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking whether time.h and sys/time.h may both be included... yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/stat.h... (cached) yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking for vprintf... yes checking for _doprnt... no checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for size_t... (cached) yes checking for off_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking for uchar... no checking for longlong... no checking whether char is unsigned... no checking size of short... 2 checking size of int... 4 checking size of long... 8 checking size of float... 4 checking size of double... 8 checking size of off_t... 8 checking size of size_t... 8 configure: generating header files and makefiles checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating nf-config config.status: creating netcdf-fortran.pc config.status: creating man4/Makefile config.status: creating fortran/Makefile config.status: creating nf_test/Makefile config.status: creating f90/Makefile config.status: creating examples/Makefile config.status: creating examples/F90/Makefile config.status: creating examples/F77/Makefile config.status: creating config.h config.status: creating fortran/nfconfig1.inc config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --without-included-gettext + '[' -n '' ']' + NPROCS=8 + make -j8 make: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2' make all-recursive make[1]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2' Making all in f90 make[2]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' x86_64-alt-linux-gfortran -g -O2 -c -o typeSizes.o typeSizes.f90 make all-am make[3]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o typeSizes.lo typeSizes.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c typeSizes.f90 -fPIC -o .libs/typeSizes.o /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o netcdf4.lo netcdf4.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c netcdf4.f90 -fPIC -o .libs/netcdf4.o /bin/sh ../libtool --tag=FC --mode=link x86_64-alt-linux-gfortran -g -O2 -o libnetcdff90.la typeSizes.lo netcdf4.lo -lnetcdf libtool: link: ar cru .libs/libnetcdff90.a .libs/typeSizes.o .libs/netcdf4.o libtool: link: ranlib .libs/libnetcdff90.a libtool: link: ( cd ".libs" && rm -f "libnetcdff90.la" && ln -s "../libnetcdff90.la" "libnetcdff90.la" ) x86_64-alt-linux-gfortran -g -O2 -c -o netcdf4.o netcdf4.f90 make[3]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' make[2]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' Making all in fortran make[2]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' echo '! NetCDF-3.' > netcdf.inc cat ../fortran/netcdf3.inc >> netcdf.inc echo >> netcdf.inc echo '! NetCDF-2.' >> netcdf.inc cat ../fortran/netcdf2.inc >> netcdf.inc echo >> netcdf.inc echo '! NetCDF-4.' >> netcdf.inc cat ../fortran/netcdf4.inc >> netcdf.inc make all-am make[3]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-attio.lo fort-attio.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-control.lo fort-control.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-dim.lo fort-dim.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-genatt.lo fort-genatt.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-geninq.lo fort-geninq.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-genvar.lo fort-genvar.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-lib.lo fort-lib.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-misc.lo fort-misc.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-dim.c -fPIC -DPIC -o .libs/fort-dim.o libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-control.c -fPIC -DPIC -o .libs/fort-control.o libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-attio.c -fPIC -DPIC -o .libs/fort-attio.o libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-genatt.c -fPIC -DPIC -o .libs/fort-genatt.o libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-genvar.c -fPIC -DPIC -o .libs/fort-genvar.o libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-misc.c -fPIC -DPIC -o .libs/fort-misc.o libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-lib.c -fPIC -DPIC -o .libs/fort-lib.o libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-geninq.c -fPIC -DPIC -o .libs/fort-geninq.o In file included from fort-control.c:3:0: fort-control.c: In function 'nf__create_': ncfortran.h:56:40: warning: value computed is not used [-Wunused-value] #define PCHUNKSIZEHINT_cfT(M,I,A,B,D) ((void*)(B=*A), &B) ^ cfortran.h:106:19: note: in expansion of macro 'PCHUNKSIZEHINT_cfT' #define _0(A,B) A##B ^ cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ cfortran.h:2082:59: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ cfortran.h:2471:21: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ fort-control.c:20:1: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5(NF_INT, nc__create, NF__CREATE, nf__create, ^ fort-control.c: In function 'nf__open_': ncfortran.h:56:40: warning: value computed is not used [-Wunused-value] #define PCHUNKSIZEHINT_cfT(M,I,A,B,D) ((void*)(B=*A), &B) ^ cfortran.h:106:19: note: in expansion of macro 'PCHUNKSIZEHINT_cfT' #define _0(A,B) A##B ^ cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ cfortran.h:2082:59: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ cfortran.h:2471:5: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ cfortran.h:2415:9: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5 (T0,CN,UN,LN,T1,T2,T3,T4,CF_0) ^ fort-control.c:34:1: note: in expansion of macro 'FCALLSCFUN4' FCALLSCFUN4(NF_INT, nc__open, NF__OPEN, nf__open, ^ In file included from ncfortran.h:11:0, from fort-genatt.c:14: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ fort-control.c: In function 'nf__create_mp_': ncfortran.h:56:40: warning: value computed is not used [-Wunused-value] #define PCHUNKSIZEHINT_cfT(M,I,A,B,D) ((void*)(B=*A), &B) ^ cfortran.h:106:19: note: in expansion of macro 'PCHUNKSIZEHINT_cfT' #define _0(A,B) A##B ^ cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ cfortran.h:2082:59: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ cfortran.h:2471:36: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ cfortran.h:2419:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,CF_0,CF_0,CF_0,CF_0) ^ fort-control.c:105:1: note: in expansion of macro 'FCALLSCFUN6' FCALLSCFUN6(NF_INT, nc__create_mp, NF__CREATE_MP, nf__create_mp, ^ fort-control.c: In function 'nf__open_mp_': ncfortran.h:56:40: warning: value computed is not used [-Wunused-value] #define PCHUNKSIZEHINT_cfT(M,I,A,B,D) ((void*)(B=*A), &B) ^ cfortran.h:106:19: note: in expansion of macro 'PCHUNKSIZEHINT_cfT' #define _0(A,B) A##B ^ cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ cfortran.h:2082:59: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ cfortran.h:2471:21: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ fort-control.c:111:1: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5(NF_INT, nc__open_mp, NF__OPEN_MP, nf__open_mp, ^ In file included from ncfortran.h:11:0, from fort-misc.c:14: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ In file included from ncfortran.h:11:0, from fort-control.c:3: fort-control.c: At top level: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ In file included from ncfortran.h:11:0, from fort-lib.c:15: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ In file included from ncfortran.h:11:0, from fort-dim.c:14: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-v2compat.lo fort-v2compat.c In file included from ncfortran.h:11:0, from fort-genvar.c:14: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-vario.lo fort-vario.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-v2compat.c -fPIC -DPIC -o .libs/fort-v2compat.o In file included from ncfortran.h:11:0, from fort-attio.c:8: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-vario.c -fPIC -DPIC -o .libs/fort-vario.o In file included from ncfortran.h:11:0, from fort-geninq.c:14: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-var1io.lo fort-var1io.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-varaio.lo fort-varaio.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-var1io.c -fPIC -DPIC -o .libs/fort-var1io.o /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-varmio.lo fort-varmio.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-varaio.c -fPIC -DPIC -o .libs/fort-varaio.o /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-varsio.lo fort-varsio.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-varmio.c -fPIC -DPIC -o .libs/fort-varmio.o libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-varsio.c -fPIC -DPIC -o .libs/fort-varsio.o In file included from ncfortran.h:11:0, from fort-var1io.c:15: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c -o fort-nc4.lo fort-nc4.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -DDLL_EXPORT -pipe -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DNO_NETCDF_2 -c fort-nc4.c -fPIC -DPIC -o .libs/fort-nc4.o In file included from ncfortran.h:11:0, from fort-varaio.c:15: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ In file included from ncfortran.h:11:0, from fort-vario.c:15: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ In file included from ./ncfortran.h:11:0, from fort-nc4.c:17: fort-nc4.c: In function 'nf_var_par_access_': fort-nc4.c:27:21: warning: implicit declaration of function 'nc_var_par_access' [-Wimplicit-function-declaration] FCALLSCFUN3(NF_INT, nc_var_par_access, NF_VAR_PAR_ACCESS, nf_var_par_access, ^ ./cfortran.h:2470:45: note: in definition of macro 'FCALLSCFUN14' _Icf(2,UU,T0,A0,0); _Icf(0,L,T0,0,0) CN( TCF(LN,T1,1,0) TCF(LN,T2,2,1) \ ^ ./cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2413:9: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5 (T0,CN,UN,LN,T1,T2,T3,CF_0,CF_0) ^ fort-nc4.c:27:1: note: in expansion of macro 'FCALLSCFUN3' FCALLSCFUN3(NF_INT, nc_var_par_access, NF_VAR_PAR_ACCESS, nf_var_par_access, ^ In file included from ncfortran.h:11:0, from fort-varmio.c:15: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ In file included from ncfortran.h:11:0, from fort-varsio.c:15: cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_put_var1_int64_': ./cfortran.h:2082:79: warning: passing argument 4 of 'nc_put_var1_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:351:32: note: in definition of macro 'INTVAR_cfT' #define INTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:21: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2415:9: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5 (T0,CN,UN,LN,T1,T2,T3,T4,CF_0) ^ fort-nc4.c:204:1: note: in expansion of macro 'FCALLSCFUN4' FCALLSCFUN4(NF_INT, nc_put_var1_longlong, NF_PUT_VAR1_INT64, nf_put_var1_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1159:1: note: expected 'const long long int *' but argument is of type 'const int *' nc_put_var1_longlong(int ncid, int varid, const size_t *indexp, ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_put_vara_int64_': ./cfortran.h:2082:79: warning: passing argument 5 of 'nc_put_vara_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:351:32: note: in definition of macro 'INTVAR_cfT' #define INTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:36: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ fort-nc4.c:206:1: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5(NF_INT, nc_put_vara_longlong, NF_PUT_VARA_INT64, nf_put_vara_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1266:1: note: expected 'const long long int *' but argument is of type 'const int *' nc_put_vara_longlong(int ncid, int varid, const size_t *startp, ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_put_vars_int64_': ./cfortran.h:2082:79: warning: passing argument 6 of 'nc_put_vars_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:351:32: note: in definition of macro 'INTVAR_cfT' #define INTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:52: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2419:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,CF_0,CF_0,CF_0,CF_0) ^ fort-nc4.c:208:1: note: in expansion of macro 'FCALLSCFUN6' FCALLSCFUN6(NF_INT, nc_put_vars_longlong, NF_PUT_VARS_INT64, nf_put_vars_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1393:1: note: expected 'const long long int *' but argument is of type 'const int *' nc_put_vars_longlong(int ncid, int varid, const size_t *startp, ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_put_varm_int64_': ./cfortran.h:2082:79: warning: passing argument 7 of 'nc_put_varm_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:361:33: note: in definition of macro 'PINTVAR_cfT' #define PINTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:68: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2421:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,CF_0,CF_0,CF_0) ^ fort-nc4.c:210:1: note: in expansion of macro 'FCALLSCFUN7' FCALLSCFUN7(NF_INT, nc_put_varm_longlong, NF_PUT_VARM_INT64, nf_put_varm_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1526:1: note: expected 'const long long int *' but argument is of type 'int *' nc_put_varm_longlong(int ncid, int varid, const size_t *startp, ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_put_var_int64_': ./cfortran.h:2082:79: warning: passing argument 3 of 'nc_put_var_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:361:33: note: in definition of macro 'PINTVAR_cfT' #define PINTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:5: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2413:9: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5 (T0,CN,UN,LN,T1,T2,T3,CF_0,CF_0) ^ fort-nc4.c:212:1: note: in expansion of macro 'FCALLSCFUN3' FCALLSCFUN3(NF_INT, nc_put_var_longlong, NF_PUT_VAR_INT64, nf_put_var_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1619:1: note: expected 'const long long int *' but argument is of type 'int *' nc_put_var_longlong(int ncid, int varid, const long long *op); ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_get_var1_int64_': ./cfortran.h:2082:79: warning: passing argument 4 of 'nc_get_var1_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:351:32: note: in definition of macro 'INTVAR_cfT' #define INTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:21: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2415:9: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5 (T0,CN,UN,LN,T1,T2,T3,T4,CF_0) ^ fort-nc4.c:215:1: note: in expansion of macro 'FCALLSCFUN4' FCALLSCFUN4(NF_INT, nc_get_var1_longlong, NF_GET_VAR1_INT64, nf_get_var1_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1163:1: note: expected 'long long int *' but argument is of type 'const int *' nc_get_var1_longlong(int ncid, int varid, const size_t *indexp, ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_get_vara_int64_': ./cfortran.h:2082:79: warning: passing argument 5 of 'nc_get_vara_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:351:32: note: in definition of macro 'INTVAR_cfT' #define INTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:36: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ fort-nc4.c:217:1: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5(NF_INT, nc_get_vara_longlong, NF_GET_VARA_INT64, nf_get_vara_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1270:1: note: expected 'long long int *' but argument is of type 'const int *' nc_get_vara_longlong(int ncid, int varid, const size_t *startp, ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_get_vars_int64_': ./cfortran.h:2082:79: warning: passing argument 6 of 'nc_get_vars_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:351:32: note: in definition of macro 'INTVAR_cfT' #define INTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:52: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2419:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,CF_0,CF_0,CF_0,CF_0) ^ fort-nc4.c:219:1: note: in expansion of macro 'FCALLSCFUN6' FCALLSCFUN6(NF_INT, nc_get_vars_longlong, NF_GET_VARS_INT64, nf_get_vars_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1398:1: note: expected 'long long int *' but argument is of type 'const int *' nc_get_vars_longlong(int ncid, int varid, const size_t *startp, ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_get_varm_int64_': ./cfortran.h:2082:79: warning: passing argument 7 of 'nc_get_varm_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:361:33: note: in definition of macro 'PINTVAR_cfT' #define PINTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:68: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2421:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,CF_0,CF_0,CF_0) ^ fort-nc4.c:221:1: note: in expansion of macro 'FCALLSCFUN7' FCALLSCFUN7(NF_INT, nc_get_varm_longlong, NF_GET_VARM_INT64, nf_get_varm_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1531:1: note: expected 'long long int *' but argument is of type 'int *' nc_get_varm_longlong(int ncid, int varid, const size_t *startp, ^ In file included from fort-nc4.c:17:0: fort-nc4.c: In function 'nf_get_var_int64_': ./cfortran.h:2082:79: warning: passing argument 3 of 'nc_get_var_longlong' from incompatible pointer type [-Wincompatible-pointer-types] #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./ncfortran.h:361:33: note: in definition of macro 'PINTVAR_cfT' #define PINTVAR_cfT(M,I,A,B,D) A ^ ./cfortran.h:107:19: note: in expansion of macro '_0' #define _(A,B) _0(A,B) /* see cat,xcat of K&R ANSI C p. 231 */ ^ ./cfortran.h:2082:77: note: in expansion of macro '_' #define TCF(NAME,TN,I,M) _SEP_(TN,M,cfCOMMA) _(TN,_cfT)(NAME,I,_(A,I),_(B,I),_(C,I)) ^ ./cfortran.h:2471:5: note: in expansion of macro 'TCF' TCF(LN,T3,3,1) TCF(LN,T4,4,1) TCF(LN,T5,5,1) TCF(LN,T6,6,1) TCF(LN,T7,7,1) \ ^ ./cfortran.h:2427:9: note: in expansion of macro 'FCALLSCFUN14' FCALLSCFUN14(T0,CN,UN,LN,T1,T2,T3,T4,T5,T6,T7,T8,T9,TA,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2417:9: note: in expansion of macro 'FCALLSCFUN10' FCALLSCFUN10(T0,CN,UN,LN,T1,T2,T3,T4,T5,CF_0,CF_0,CF_0,CF_0,CF_0) ^ ./cfortran.h:2413:9: note: in expansion of macro 'FCALLSCFUN5' FCALLSCFUN5 (T0,CN,UN,LN,T1,T2,T3,CF_0,CF_0) ^ fort-nc4.c:223:1: note: in expansion of macro 'FCALLSCFUN3' FCALLSCFUN3(NF_INT, nc_get_var_longlong, NF_GET_VAR_INT64, nf_get_var_int64, ^ In file included from netcdf_f.h:9:0, from fort-nc4.c:16: /usr/lib64/openmpi/include/netcdf/netcdf.h:1622:1: note: expected 'long long int *' but argument is of type 'int *' nc_get_var_longlong(int ncid, int varid, long long *ip); ^ In file included from ./ncfortran.h:11:0, from fort-nc4.c:17: fort-nc4.c: At top level: ./cfortran.h:621:12: warning: 'num_elem' defined but not used [-Wunused-function] static int num_elem(char *strv, unsigned elem_len, int term_char, int num_term) ^ /bin/sh ../libtool --tag=FC --mode=link x86_64-alt-linux-gfortran -g -O2 -version-number 5:3:1 -o libnetcdff.la -rpath /usr/lib64/openmpi/lib fort-attio.lo fort-control.lo fort-dim.lo fort-genatt.lo fort-geninq.lo fort-genvar.lo fort-lib.lo fort-misc.lo fort-v2compat.lo fort-vario.lo fort-var1io.lo fort-varaio.lo fort-varmio.lo fort-varsio.lo fort-nc4.lo ../f90/libnetcdff90.la -lnetcdf libtool: link: x86_64-alt-linux-gfortran -shared -fPIC .libs/fort-attio.o .libs/fort-control.o .libs/fort-dim.o .libs/fort-genatt.o .libs/fort-geninq.o .libs/fort-genvar.o .libs/fort-lib.o .libs/fort-misc.o .libs/fort-v2compat.o .libs/fort-vario.o .libs/fort-var1io.o .libs/fort-varaio.o .libs/fort-varmio.o .libs/fort-varsio.o .libs/fort-nc4.o -Wl,--whole-archive ../f90/.libs/libnetcdff90.a -Wl,--no-whole-archive -lnetcdf -O2 -Wl,-soname -Wl,libnetcdff.so.5 -o .libs/libnetcdff.so.5.3.1 libtool: link: (cd ".libs" && rm -f "libnetcdff.so.5" && ln -s "libnetcdff.so.5.3.1" "libnetcdff.so.5") libtool: link: (cd ".libs" && rm -f "libnetcdff.so" && ln -s "libnetcdff.so.5.3.1" "libnetcdff.so") libtool: link: ( cd ".libs" && rm -f "libnetcdff.la" && ln -s "../libnetcdff.la" "libnetcdff.la" ) make[3]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' make[2]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' Making all in nf_test make[2]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/nf_test' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/nf_test' Making all in man4 make[2]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/man4' Updating ./version-f77.texi Updating ./version-f90.texi make[2]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/man4' Making all in examples make[2]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples' Making all in F77 make[3]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples/F77' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples/F77' Making all in F90 make[3]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples/F90' make all-am make[4]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples/F90' make[4]: Nothing to be done for `all-am'. make[4]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples/F90' make[3]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples/F90' make[3]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples' make[2]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/examples' make[2]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2' make[2]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2' make[1]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2' make: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2' + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.88493 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/libnetcdff5-mpi-buildroot + : + /bin/rm -rf -- /usr/src/tmp/libnetcdff5-mpi-buildroot + cd libnetcdff5-mpi-4.2 + source /usr/lib64/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib64/openmpi/bin ++ PATH=/usr/lib64/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib64/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib64/openmpi/man ++ MANPATH=/usr/lib64/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/libnetcdff5-mpi-buildroot make: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2' Making install in f90 make[1]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' make install-am make[2]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' make[3]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' make[3]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/share/man/man3' /bin/install -p -m 644 netcdf_f90.3 '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/share/man/man3' /bin/mkdir -p '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/include' /bin/install -p -m 644 typesizes.mod netcdf.mod '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/include' make[3]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' make[2]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' make[1]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/f90' Making install in fortran make[1]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' make install-am make[2]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' make[3]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' /bin/mkdir -p '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/lib' /bin/sh ../libtool --mode=install /bin/install -p libnetcdff.la '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/lib' libtool: install: /bin/install -p .libs/libnetcdff.so.5.3.1 /usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdff.so.5.3.1 libtool: install: (cd /usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/lib && { ln -s -f libnetcdff.so.5.3.1 libnetcdff.so.5 || { rm -f libnetcdff.so.5 && ln -s libnetcdff.so.5.3.1 libnetcdff.so.5; }; }) libtool: install: (cd /usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/lib && { ln -s -f libnetcdff.so.5.3.1 libnetcdff.so || { rm -f libnetcdff.so && ln -s libnetcdff.so.5.3.1 libnetcdff.so; }; }) libtool: install: /bin/install -p .libs/libnetcdff.lai /usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdff.la libtool: install: warning: remember to run `libtool --finish /usr/lib64/openmpi/lib' /bin/mkdir -p '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/share/man/man3' /bin/install -p -m 644 netcdf_f77.3 '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/share/man/man3' /bin/mkdir -p '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/include' /bin/install -p -m 644 netcdf.inc '/usr/src/tmp/libnetcdff5-mpi-buildroot/usr/lib64/openmpi/include' make[3]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' make[2]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' make[1]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/fortran' Making install in nf_test make[1]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/nf_test' make[2]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/nf_test' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/nf_test' make[1]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/nf_test' Making install in man4 make[1]: Entering directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/man4' restore=: && backupdir=".am$$" && \ am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \ rm -rf $backupdir && mkdir $backupdir && \ if (/bin/sh /usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/missing makeinfo --version) >/dev/null 2>&1; then \ for f in netcdf-f77.info netcdf-f77.info-[0-9] netcdf-f77.info-[0-9][0-9] netcdf-f77.i[0-9] netcdf-f77.i[0-9][0-9]; do \ if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \ done; \ else :; fi && \ cd "$am__cwd"; \ if /bin/sh /usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/missing makeinfo -I . \ -o netcdf-f77.info netcdf-f77.texi; \ then \ rc=0; \ CDPATH="${ZSH_VERSION+.}:" && cd .; \ else \ rc=$?; \ CDPATH="${ZSH_VERSION+.}:" && cd . && \ $restore $backupdir/* `echo "./netcdf-f77.info" | sed 's|[^/]*$||'`; \ fi; \ rm -rf $backupdir; exit $rc /usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/missing: line 81: makeinfo: command not found WARNING: 'makeinfo' is missing on your system. You should only need it if you modified a '.texi' file, or any other file indirectly affecting the aspect of the manual. You might want to install the Texinfo package: The spurious makeinfo call might also be the consequence of using a buggy 'make' (AIX, DU, IRIX), in which case you might want to install GNU make: make[1]: *** [netcdf-f77.info] Error 127 make[1]: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2/man4' make: *** [install-recursive] Error 1 make: Leaving directory `/usr/src/RPM/BUILD/libnetcdff5-mpi-4.2' error: Bad exit status from /usr/src/tmp/rpm-tmp.88493 (%install) RPM build errors: Bad exit status from /usr/src/tmp/rpm-tmp.88493 (%install) Command exited with non-zero status 1 24.89user 2.82system 0:28.82elapsed 96%CPU (0avgtext+0avgdata 207136maxresident)k 0inputs+0outputs (0major+1369676minor)pagefaults 0swaps hsh-rebuild: rebuild of `libnetcdff5-mpi-4.2-alt4.src.rpm' failed. Command exited with non-zero status 1 32.81user 5.89system 0:39.68elapsed 97%CPU (0avgtext+0avgdata 207136maxresident)k 12784inputs+0outputs (0major+1686973minor)pagefaults 0swaps