<86>Feb 3 01:58:34 userdel[56943]: delete user 'rooter' <86>Feb 3 01:58:34 userdel[56943]: removed group 'rooter' owned by 'rooter' <86>Feb 3 01:58:34 userdel[56943]: removed shadow group 'rooter' owned by 'rooter' <86>Feb 3 01:58:34 groupadd[57001]: group added to /etc/group: name=rooter, GID=627 <86>Feb 3 01:58:34 groupadd[57001]: group added to /etc/gshadow: name=rooter <86>Feb 3 01:58:34 groupadd[57001]: new group: name=rooter, GID=627 <86>Feb 3 01:58:34 useradd[57037]: new user: name=rooter, UID=627, GID=627, home=/root, shell=/bin/bash <86>Feb 3 01:58:34 userdel[57130]: delete user 'builder' <86>Feb 3 01:58:34 userdel[57130]: removed group 'builder' owned by 'builder' <86>Feb 3 01:58:34 userdel[57130]: removed shadow group 'builder' owned by 'builder' <86>Feb 3 01:58:34 groupadd[57176]: group added to /etc/group: name=builder, GID=628 <86>Feb 3 01:58:34 groupadd[57176]: group added to /etc/gshadow: name=builder <86>Feb 3 01:58:34 groupadd[57176]: new group: name=builder, GID=628 <86>Feb 3 01:58:34 useradd[57224]: new user: name=builder, UID=628, GID=628, home=/usr/src, shell=/bin/bash <13>Feb 3 01:58:37 rpmi: libexpat-2.2.4-alt0.M80P.1 1503871120 installed <13>Feb 3 01:58:37 rpmi: libpng15-1.5.28-alt1 1484572014 installed <13>Feb 3 01:58:38 rpmi: libsqlite3-3.15.2-alt1 1480432212 installed <13>Feb 3 01:58:38 rpmi: libopenblas-0.2.14-alt1.git20150324 1433158855 installed <13>Feb 3 01:58:38 rpmi: libjpeg-2:1.3.1-alt0.1 1388074033 installed <13>Feb 3 01:58:38 rpmi: libicu56-1:5.6.1-alt1.1 1458012333 installed <13>Feb 3 01:58:38 rpmi: libidn2-2.0.4-alt3.M80P.1 1520307194 installed <13>Feb 3 01:58:38 rpmi: libwayland-server-1.14.0-alt0.M80P.1 1502720500 installed <13>Feb 3 01:58:38 rpmi: libICE-1.0.9-alt1 1409902719 installed <13>Feb 3 01:58:38 rpmi: libgdbm-1.8.3-alt10 1454943313 installed <13>Feb 3 01:58:38 rpmi: ca-certificates-2016.02.25-alt1 1462368370 installed <13>Feb 3 01:58:38 rpmi: libcrypto10-1.0.2n-alt0.M80P.1 1512766129 installed <13>Feb 3 01:58:38 rpmi: libSM-1.2.2-alt1 1391072686 installed <13>Feb 3 01:58:39 rpmi: icu-utils-1:5.6.1-alt1.1 1458012333 installed <13>Feb 3 01:58:39 rpmi: libtiff5-4.0.3-alt1 1348347498 installed <13>Feb 3 01:58:39 rpmi: rpm-macros-sphinx-1:1.4-alt8.a0.git20150813 1460726255 installed <13>Feb 3 01:58:39 rpmi: python-module-sphinx-pickles-1:1.4-alt8.a0.git20150813 1460726255 installed <13>Feb 3 01:58:39 rpmi: python-module-ordereddict-1.1-alt1.1 1321445242 installed <13>Feb 3 01:58:39 rpmi: python-module-google-0.4.0-alt2.1 1457968526 installed <13>Feb 3 01:58:39 rpmi: python-module-sphinx_rtd_theme-0.1.8-alt1.git20150730.1 1457859644 installed <13>Feb 3 01:58:39 rpmi: python-sphinx-objects.inv-2.3.6.20160413-alt1 1460595508 installed <13>Feb 3 01:58:39 rpmi: libxapian-1.2.23-alt1 1459318465 installed <13>Feb 3 01:58:39 rpmi: python-module-xapian-1.2.23-alt1.M80P.1 1503464748 installed <13>Feb 3 01:58:39 rpmi: libpcre16-8.40-alt1 1484570205 installed <13>Feb 3 01:58:39 rpmi: pcretest-8.40-alt1 1484570205 installed <13>Feb 3 01:58:39 rpmi: libgpg-error-1.31-alt1.M80P.1 1529024730 installed <13>Feb 3 01:58:39 rpmi: libgcrypt20-1.8.3-alt3 p8.214131.100 1542819006 installed <13>Feb 3 01:58:39 rpmi: libxslt-1.1.28-alt4 1448210404 installed <13>Feb 3 01:58:39 rpmi: libdatrie-0.2.8-alt1_5 1410185969 installed <13>Feb 3 01:58:39 rpmi: libthai-0.1.24-alt1_1 1459282110 installed <13>Feb 3 01:58:39 rpmi: libxblas-1.0.248-alt1 1322010716 installed <13>Feb 3 01:58:39 rpmi: libquadmath0-5.3.1-alt3 1457662528 installed <13>Feb 3 01:58:39 rpmi: libgfortran3-5.3.1-alt3 1457662528 installed <13>Feb 3 01:58:39 rpmi: liblapack-1:3.5.0-alt1 1401382194 installed <13>Feb 3 01:58:39 rpmi: publicsuffix-list-dafsa-20181106-alt1 p8.216229.100 1541669077 installed <13>Feb 3 01:58:39 rpmi: libpsl-0.18.0-alt0.M80P.1 1502785107 installed <13>Feb 3 01:58:39 rpmi: libnghttp2-1.8.0-alt1 1456818805 installed <13>Feb 3 01:58:39 rpmi: libbrotlicommon0-1.0.4-alt0.M80P.1 1528205024 installed <13>Feb 3 01:58:39 rpmi: libbrotlidec0-1.0.4-alt0.M80P.1 1528205024 installed <13>Feb 3 01:58:39 rpmi: libpixman-3:0.32.8-alt1 1447610691 installed <13>Feb 3 01:58:39 rpmi: libgraphite2-1.3.10-alt0.M80P.1 1496411360 installed <13>Feb 3 01:58:39 rpmi: libwayland-client-1.14.0-alt0.M80P.1 1502720500 installed <13>Feb 3 01:58:39 rpmi: libxshmfence-1.2-alt1 1420972191 installed <13>Feb 3 01:58:39 rpmi: libpciaccess-1:0.13.4-alt1 1431681688 installed <13>Feb 3 01:58:39 rpmi: libdrm-1:2.4.89-alt1.M80P.1 1516609380 installed <13>Feb 3 01:58:39 rpmi: libgbm-4:17.3.9-alt0.M80P.1 1526555825 installed <13>Feb 3 01:58:39 rpmi: libX11-locales-3:1.6.3-alt1 1431956885 installed <13>Feb 3 01:58:39 rpmi: libXdmcp-1.1.1-alt1 1334617699 installed <13>Feb 3 01:58:39 rpmi: libXau-1.0.8-alt1 1369565807 installed <13>Feb 3 01:58:39 rpmi: libxcb-1.12-alt2 p8.218219.300 1545313310 installed <13>Feb 3 01:58:39 rpmi: libX11-3:1.6.3-alt1 1431956911 installed <13>Feb 3 01:58:39 rpmi: libXext-1.3.3-alt1 1409902932 installed <13>Feb 3 01:58:39 rpmi: libXrender-0.9.8-alt1 1371312110 installed <13>Feb 3 01:58:39 rpmi: libXt-1.1.4-alt1 1369984716 installed <13>Feb 3 01:58:39 rpmi: libXmu-1.1.2-alt1 1391072528 installed <13>Feb 3 01:58:39 rpmi: libXxf86vm-1.1.3-alt1 1369984824 installed <13>Feb 3 01:58:39 rpmi: libXdamage-1.1.3-alt4 1297162596 installed <13>Feb 3 01:58:39 rpmi: libXfixes-5.0.1-alt1 1369809606 installed <13>Feb 3 01:58:39 rpmi: libGL-4:17.3.9-alt0.M80P.1 1526555825 installed <13>Feb 3 01:58:39 rpmi: libEGL-4:17.3.9-alt0.M80P.1 1526555825 installed <13>Feb 3 01:58:39 rpmi: libtinfo-devel-5.9-alt8 1456756459 installed <13>Feb 3 01:58:39 rpmi: libncurses-devel-5.9-alt8 1456756459 installed <13>Feb 3 01:58:39 rpmi: python-modules-curses-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:39 rpmi: libverto-0.2.6-alt1_6 1455633234 installed <13>Feb 3 01:58:39 rpmi: libkeyutils-1.5.10-alt0.M80P.2 p8+216694.100.6.1 1547827915 installed <13>Feb 3 01:58:39 rpmi: libcom_err-1.42.13-alt2 1449075846 installed <13>Feb 3 01:58:39 rpmi: libpcre-devel-8.40-alt1 1484570205 installed <13>Feb 3 01:58:40 rpmi: libicu-devel-1:5.6.1-alt1.1 1458012333 installed <13>Feb 3 01:58:40 rpmi: libreadline-devel-6.3.8-alt2 1449773803 installed <13>Feb 3 01:58:40 rpmi: bzlib-devel-1:1.0.6-alt4 1449156902 installed <13>Feb 3 01:58:40 rpmi: zlib-devel-1.2.8-alt1 1371079009 installed <13>Feb 3 01:58:40 rpmi: liblzma-devel-5.2.3-alt0.M80P.1 1502296864 installed <13>Feb 3 01:58:40 rpmi: libssl10-1.0.2n-alt0.M80P.1 1512766129 installed <86>Feb 3 01:58:40 groupadd[85912]: group added to /etc/group: name=_keytab, GID=499 <86>Feb 3 01:58:40 groupadd[85912]: group added to /etc/gshadow: name=_keytab <86>Feb 3 01:58:40 groupadd[85912]: new group: name=_keytab, GID=499 <13>Feb 3 01:58:40 rpmi: libkrb5-1.14.6-alt1.M80P.1 1525355673 installed <13>Feb 3 01:58:40 rpmi: libharfbuzz-1.6.3-alt0.M80P.1 1509918814 installed <13>Feb 3 01:58:40 rpmi: libfreetype-2.8-alt0.M80P.3 1505462817 installed <13>Feb 3 01:58:40 rpmi: fontconfig-2.12.6-alt1.M80P.1 1506008910 installed Updating fonts cache: <29>Feb 3 01:58:41 fontconfig: Updating fonts cache: succeeded [ DONE ] <13>Feb 3 01:58:41 rpmi: libcairo-1:1.14.4-alt1 1447005495 installed <13>Feb 3 01:58:41 rpmi: libXft-2.3.2-alt1 1409902650 installed <13>Feb 3 01:58:41 rpmi: libpango-1.40.14-alt0.M80P.1 1510824230 installed <86>Feb 3 01:58:41 groupadd[90491]: group added to /etc/group: name=sasl, GID=498 <86>Feb 3 01:58:41 groupadd[90491]: group added to /etc/gshadow: name=sasl <86>Feb 3 01:58:41 groupadd[90491]: new group: name=sasl, GID=498 <13>Feb 3 01:58:41 rpmi: libsasl2-3-2.1.26-alt7 1479477445 installed <13>Feb 3 01:58:41 rpmi: libldap-2.4.45-alt1.M80P.1 1513980376 installed <13>Feb 3 01:58:41 rpmi: libcurl-7.62.0-alt3 p8.216462.100 1542193807 installed <13>Feb 3 01:58:44 rpmi: R-base-3.4.3-alt0.M80P.1 1521663738 installed <13>Feb 3 01:58:44 rpmi: R-devel-3.4.3-alt0.M80P.1 1521663738 installed <13>Feb 3 01:58:45 rpmi: python3-base-3.5.4-alt2.M80P.1 1527753911 installed <13>Feb 3 01:58:45 rpmi: python-modules-compiler-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:45 rpmi: python3-3.5.4-alt2.M80P.1 1527753911 installed <13>Feb 3 01:58:45 rpmi: rpm-build-python3-0.1.10.10-alt1.M80P.1 1530521451 installed <13>Feb 3 01:58:45 rpmi: libpython3-3.5.4-alt2.M80P.1 1527753911 installed <13>Feb 3 01:58:45 rpmi: python3-module-py-1.4.34-alt0.M80P.1 1503506764 installed <13>Feb 3 01:58:45 rpmi: python3-module-six-1.10.0-alt7 1496087616 installed <13>Feb 3 01:58:45 rpmi: python3-module-singledispatch-3.4.0.3-alt1.1.1 1458110852 installed <13>Feb 3 01:58:45 rpmi: python3-dev-3.5.4-alt2.M80P.1 1527753911 installed <13>Feb 3 01:58:45 rpmi: python3-modules-sqlite3-3.5.4-alt2.M80P.1 1527753911 installed <13>Feb 3 01:58:45 rpmi: python-modules-email-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:45 rpmi: python3-module-pytest-3.2.1-alt0.M80P.1 1503499784 installed <13>Feb 3 01:58:46 rpmi: python3-module-setuptools-1:18.5-alt0.M80P.1 1497527461 installed <13>Feb 3 01:58:46 rpmi: python-modules-unittest-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-modules-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-modules-xml-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-modules-encodings-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-module-six-1.10.0-alt7 1496087616 installed <13>Feb 3 01:58:46 rpmi: python-modules-json-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-modules-ctypes-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-modules-multiprocessing-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-modules-logging-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-tools-2to3-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-module-whoosh-2.7.0-alt1.hg20150805.1.1 1457859779 installed <13>Feb 3 01:58:46 rpmi: python-module-webencodings-0.5.1-alt0.M80P.1 1507185481 installed <13>Feb 3 01:58:46 rpmi: python-modules-hotshot-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-modules-bsddb-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-strict-2.7.11-alt6.M80P.1 1527682534 installed <13>Feb 3 01:58:46 rpmi: python-dev-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:46 rpmi: python-module-PyStemmer-1.0.1-alt1.2.1 1321387369 installed <13>Feb 3 01:58:46 rpmi: python-module-snowballstemmer-1.2.0-alt2.1 1457859319 installed <13>Feb 3 01:58:46 rpmi: python-module-pytz-1:2015.4-alt1.1.1 1460413776 installed <13>Feb 3 01:58:46 rpmi: python-module-py-1.4.34-alt0.M80P.1 1503506764 installed <13>Feb 3 01:58:46 rpmi: python-module-simplejson-3.15.0-alt1.M80P.1 1528995430 installed <13>Feb 3 01:58:46 rpmi: python-module-markupsafe-0.23-alt1.2.1 1459593526 installed <13>Feb 3 01:58:46 rpmi: python-modules-sqlite3-2.7.11-alt6.M80P.1 1527682470 installed <13>Feb 3 01:58:47 rpmi: python-module-SQLAlchemy-1.0.12-alt1 1461160345 installed <13>Feb 3 01:58:47 rpmi: python-module-singledispatch-3.4.0.3-alt1.1.1 1458110852 installed <13>Feb 3 01:58:47 rpmi: python-module-setuptools-1:18.5-alt0.M80P.1 1497527461 installed <13>Feb 3 01:58:47 rpmi: python-module-jinja2-2.9-alt1.dev.git20150726.1.1.1 1460400640 installed <13>Feb 3 01:58:47 rpmi: python-module-babel-1:2.3.4-alt0.M80P.1 1480881327 installed <13>Feb 3 01:58:47 rpmi: python-module-jinja2-tests-2.9-alt1.dev.git20150726.1.1.1 1460400640 installed <13>Feb 3 01:58:47 rpmi: python-module-pytest-3.2.1-alt0.M80P.1 1503499784 installed <13>Feb 3 01:58:47 rpmi: python-module-cssselect-0.9.1-alt1.1 1457858257 installed <13>Feb 3 01:58:47 rpmi: python-module-lxml-4.0.0-alt0.M80P.1 1507163741 installed <13>Feb 3 01:58:47 rpmi: python-module-docutils-0.13-alt4.git20150716.1.1 1460400317 installed <13>Feb 3 01:58:47 rpmi: python-module-html5lib-1:0.999999999-alt1.M80P.2 1507185603 installed <13>Feb 3 01:58:48 rpmi: python-module-Pygments-2.2.0-alt1.M80P.2 p8.214223.100 1538848792 installed <13>Feb 3 01:58:48 rpmi: python-module-sphinx-1:1.4-alt8.a0.git20150813 1460726255 installed <13>Feb 3 01:58:48 rpmi: python-module-alabaster-0.7.6-alt1.git20150703.1 1457857919 installed <13>Feb 3 01:58:48 rpmi: python-module-sphinx-devel-1:1.4-alt8.a0.git20150813 1460726255 installed Installing python-module-rpy2-2.7.8-alt1.1.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.93403 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf python-module-rpy2-2.7.8 + echo 'Source #0 (rpy2-2.7.8.tar.gz):' Source #0 (rpy2-2.7.8.tar.gz): + /bin/gzip -dc /usr/src/RPM/SOURCES/rpy2-2.7.8.tar.gz + /bin/tar -xf - + cd python-module-rpy2-2.7.8 + /bin/chmod -c -Rf u+rwX,go-w . + cp -fR . ../python3 + sed -i 's|@PYVER@|2.7|g' doc/Makefile + install -pm644 /usr/share/python-sphinx/objects.inv doc/ + '[' -e doc/conf.py ']' + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.26526 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python-module-rpy2-2.7.8 + CFLAGS='-pipe -Wall -g -O2 -fno-strict-aliasing' + export CFLAGS + CXXFLAGS='-pipe -Wall -g -O2 -fno-strict-aliasing' + export CXXFLAGS + FFLAGS='-pipe -Wall -g -O2 -fno-strict-aliasing' + export FFLAGS + /usr/bin/python2.7 setup.py build --debug R version 3.4.3 (2017-11-30) -- "Kite-Eating Tree" /usr/lib64/R/bin/R CMD config --ldflags /usr/lib64/R/bin/R CMD config --cppflags Compilation parameters for rpy2's C components: include_dirs = ['/usr/include/R'] library_dirs = ['/usr/local/lib64', '/usr/lib64/R/lib'] libraries = ['R', 'pcre', 'lzma', 'bz2', 'z', 'rt', 'dl', 'm', 'icuuc', 'icui18n'] extra_link_args = ['-Wl,--export-dynamic'] running build running build_py creating build creating build/lib.linux-x86_64-2.7 creating build/lib.linux-x86_64-2.7/rpy2 copying ./rpy/tests_rpy_classic.py -> build/lib.linux-x86_64-2.7/rpy2 copying ./rpy/tests.py -> build/lib.linux-x86_64-2.7/rpy2 copying ./rpy/rpy_classic.py -> build/lib.linux-x86_64-2.7/rpy2 copying ./rpy/__init__.py -> build/lib.linux-x86_64-2.7/rpy2 creating build/lib.linux-x86_64-2.7/rpy2/rlike copying ./rpy/rlike/indexing.py -> build/lib.linux-x86_64-2.7/rpy2/rlike copying ./rpy/rlike/functional.py -> build/lib.linux-x86_64-2.7/rpy2/rlike copying ./rpy/rlike/container.py -> build/lib.linux-x86_64-2.7/rpy2/rlike copying ./rpy/rlike/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/rlike creating build/lib.linux-x86_64-2.7/rpy2/rlike/tests copying ./rpy/rlike/tests/test_indexing.py -> build/lib.linux-x86_64-2.7/rpy2/rlike/tests copying ./rpy/rlike/tests/test_functional.py -> build/lib.linux-x86_64-2.7/rpy2/rlike/tests copying ./rpy/rlike/tests/test_container.py -> build/lib.linux-x86_64-2.7/rpy2/rlike/tests copying ./rpy/rlike/tests/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/rlike/tests creating build/lib.linux-x86_64-2.7/rpy2/rinterface copying ./rpy/rinterface/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface creating build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpVectorNumeric.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpVector.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpSymbol.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpExtPtr.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpEnvironment.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpClosure.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_Sexp.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_EmbeddedR.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_Device.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests copying ./rpy/rinterface/tests/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/rinterface/tests creating build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/vectors.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/robject.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/pandas2ri.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/packages_utils.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/packages.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/numpy2ri.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/methods.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/language.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/help.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/functions.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/environments.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/conversion.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/constants.py -> build/lib.linux-x86_64-2.7/rpy2/robjects copying ./rpy/robjects/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/robjects creating build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testVector.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testRobjects.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testRObject.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testPandasConversions.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testPackages.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testNumpyConversions.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testMethods.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testLanguage.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testHelp.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testFunction.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testFormula.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testEnvironment.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testDataFrame.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/testArray.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests copying ./rpy/robjects/tests/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/tests creating build/lib.linux-x86_64-2.7/rpy2/robjects/lib copying ./rpy/robjects/lib/grid.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/lib copying ./rpy/robjects/lib/ggplot2.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/lib copying ./rpy/robjects/lib/dplyr.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/lib copying ./rpy/robjects/lib/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/lib creating build/lib.linux-x86_64-2.7/rpy2/robjects/lib/tests copying ./rpy/robjects/lib/tests/test_ggplot2.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/lib/tests copying ./rpy/robjects/lib/tests/test_dplyr.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/lib/tests copying ./rpy/robjects/lib/tests/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/robjects/lib/tests creating build/lib.linux-x86_64-2.7/rpy2/interactive copying ./rpy/interactive/process_revents.py -> build/lib.linux-x86_64-2.7/rpy2/interactive copying ./rpy/interactive/packages.py -> build/lib.linux-x86_64-2.7/rpy2/interactive copying ./rpy/interactive/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/interactive creating build/lib.linux-x86_64-2.7/rpy2/interactive/tests copying ./rpy/interactive/tests/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/interactive/tests creating build/lib.linux-x86_64-2.7/rpy2/ipython copying ./rpy/ipython/rmagic.py -> build/lib.linux-x86_64-2.7/rpy2/ipython copying ./rpy/ipython/html.py -> build/lib.linux-x86_64-2.7/rpy2/ipython copying ./rpy/ipython/ggplot.py -> build/lib.linux-x86_64-2.7/rpy2/ipython copying ./rpy/ipython/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/ipython creating build/lib.linux-x86_64-2.7/rpy2/ipython/tests copying ./rpy/ipython/tests/test_rmagic.py -> build/lib.linux-x86_64-2.7/rpy2/ipython/tests copying ./rpy/ipython/tests/__init__.py -> build/lib.linux-x86_64-2.7/rpy2/ipython/tests running build_clib building 'r_utils' library creating build/temp.linux-x86_64-2.7 creating build/temp.linux-x86_64-2.7/rpy creating build/temp.linux-x86_64-2.7/rpy/rinterface x86_64-alt-linux-gcc -pthread -DNDEBUG -pipe -Wall -g -O3 -pipe -Wall -g -O2 -fno-strict-aliasing -fPIC -g -I./rpy/rinterface -I/usr/include/R -c ./rpy/rinterface/r_utils.c -o build/temp.linux-x86_64-2.7/./rpy/rinterface/r_utils.o ar rc build/temp.linux-x86_64-2.7/libr_utils.a build/temp.linux-x86_64-2.7/./rpy/rinterface/r_utils.o running build_ext R version 3.4.3 (2017-11-30) -- "Kite-Eating Tree" building 'rpy2.rinterface._rinterface' extension x86_64-alt-linux-gcc -pthread -DNDEBUG -pipe -Wall -g -O3 -pipe -Wall -g -O2 -fno-strict-aliasing -fPIC -g -DR_INTERFACE_PTRS=1 -DHAVE_POSIX_SIGJMP=1 -DRIF_HAS_RSIGHAND=1 -DCSTACK_DEFNS=1 -DHAS_READLINE=1 -I./rpy/rinterface -I/usr/include/R -I/usr/include/python2.7 -c ./rpy/rinterface/_rinterface.c -o build/temp.linux-x86_64-2.7/./rpy/rinterface/_rinterface.o In file included from /usr/include/python2.7/Python.h:8:0, from ./rpy/rinterface/_rinterface.c:55: /usr/include/python2.7/pyconfig.h:1194:0: warning: "_POSIX_C_SOURCE" redefined #define _POSIX_C_SOURCE 200112L ^ In file included from /usr/include/signal.h:28:0, from ./rpy/rinterface/_rinterface.c:51: /usr/include/features.h:225:0: note: this is the location of the previous definition # define _POSIX_C_SOURCE 200809L ^ In file included from ./rpy/rinterface/_rinterface.c:122:0: ./rpy/rinterface/embeddedr.c: In function 'SexpObject_clear': ./rpy/rinterface/embeddedr.c:48:12: warning: unused variable 'res' [-Wunused-variable] SEXP res = rpy2_remove(Rf_mkString(name_buf), ^ In file included from ./rpy/rinterface/_rinterface.c:125:0: ./rpy/rinterface/sexp.c: In function 'Sexp_init': ./rpy/rinterface/sexp.c:738:13: warning: unused variable 'copy' [-Wunused-variable] PyObject *copy = Py_True; ^ In file included from ./rpy/rinterface/_rinterface.c:58:0: ./rpy/rinterface/_rinterface.c: At top level: ./rpy/rinterface/_rinterface.h:203:44: warning: 'PyRinterface_IsInitialized' declared 'static' but never defined [-Wunused-function] static PyRinterface_IsInitialized_RETURN PyRinterface_IsInitialized PyRinterface_IsInitialized_PROTO; ^ ./rpy/rinterface/_rinterface.h:204:38: warning: 'PyRinterface_FindFun' declared 'static' but never defined [-Wunused-function] static PyRinterface_FindFun_RETURN PyRinterface_FindFun PyRinterface_FindFun_PROTO; ^ ./rpy/rinterface/_rinterface.h:205:20: warning: 'embeddedR_isInitialized' defined but not used [-Wunused-variable] static PyObject *embeddedR_isInitialized; ^ In file included from ./rpy/rinterface/_rinterface.c:128:0: ./rpy/rinterface/sequence.c:2168:1: warning: 'ComplexVectorSexp_AsSexp' defined but not used [-Wunused-function] ComplexVectorSexp_AsSexp(PyObject *pyfloat) { ^ In file included from ./rpy/rinterface/_rinterface.c:58:0: ./rpy/rinterface/_rinterface.c: In function 'EmbeddedR_ShowFiles': ./rpy/rinterface/_rinterface.h:72:5: warning: 'gstate' may be used uninitialized in this function [-Wmaybe-uninitialized] PyGILState_Release(gstate); \ ^ ./rpy/rinterface/_rinterface.c:837:20: note: 'gstate' was declared here PyGILState_STATE gstate; ^ In file included from ./rpy/rinterface/_rinterface.c:58:0: ./rpy/rinterface/_rinterface.c: In function 'EmbeddedR_ResetConsole': ./rpy/rinterface/_rinterface.h:72:5: warning: 'gstate' may be used uninitialized in this function [-Wmaybe-uninitialized] PyGILState_Release(gstate); \ ^ ./rpy/rinterface/_rinterface.c:683:20: note: 'gstate' was declared here PyGILState_STATE gstate; ^ ./rpy/rinterface/_rinterface.c: In function 'EmbeddedR_WriteConsoleEx': ./rpy/rinterface/_rinterface.c:383:10: warning: 'consolecallback' may be used uninitialized in this function [-Wmaybe-uninitialized] result = PyEval_CallObject(consolecallback, arglist); ^ In file included from ./rpy/rinterface/_rinterface.c:58:0: ./rpy/rinterface/_rinterface.c: In function 'EmbeddedR_CleanUp': ./rpy/rinterface/_rinterface.h:72:5: warning: 'gstate' may be used uninitialized in this function [-Wmaybe-uninitialized] PyGILState_Release(gstate); \ ^ ./rpy/rinterface/_rinterface.c:985:20: note: 'gstate' was declared here PyGILState_STATE gstate; ^ x86_64-alt-linux-gcc -pthread -shared -pipe -Wall -g -O2 -fno-strict-aliasing -g build/temp.linux-x86_64-2.7/./rpy/rinterface/_rinterface.o -L/usr/local/lib64 -L/usr/lib64/R/lib -Lbuild/temp.linux-x86_64-2.7 -Wl,-R/usr/local/lib64 -Wl,-R/usr/lib64/R/lib -lR -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lpython2.7 -lr_utils -o build/lib.linux-x86_64-2.7/rpy2/rinterface/_rinterface.so -Wl,--export-dynamic building 'rpy2.rinterface._rpy_device' extension x86_64-alt-linux-gcc -pthread -DNDEBUG -pipe -Wall -g -O3 -pipe -Wall -g -O2 -fno-strict-aliasing -fPIC -g -DR_INTERFACE_PTRS=1 -DHAVE_POSIX_SIGJMP=1 -DRIF_HAS_RSIGHAND=1 -DCSTACK_DEFNS=1 -DHAS_READLINE=1 -I/usr/include/R -Irpy/rinterface -I/usr/include/python2.7 -c ./rpy/rinterface/_rpy_device.c -o build/temp.linux-x86_64-2.7/./rpy/rinterface/_rpy_device.o ./rpy/rinterface/_rpy_device.c: In function 'init_rpy_device': ./rpy/rinterface/_rpy_device.c:1407:17: warning: variable 'd' set but not used [-Wunused-but-set-variable] PyObject *m, *d; ^ ./rpy/rinterface/_rpy_device.c: At top level: ./rpy/rinterface/_rpy_device.c:936:1: warning: 'GrDev_clear' defined but not used [-Wunused-function] GrDev_clear(PyGrDevObject *self) ^ x86_64-alt-linux-gcc -pthread -shared -pipe -Wall -g -O2 -fno-strict-aliasing -g build/temp.linux-x86_64-2.7/./rpy/rinterface/_rpy_device.o -L/usr/local/lib64 -L/usr/lib64/R/lib -Lbuild/temp.linux-x86_64-2.7 -Wl,-R/usr/local/lib64 -Wl,-R/usr/lib64/R/lib -lR -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lpython2.7 -lr_utils -o build/lib.linux-x86_64-2.7/rpy2/rinterface/_rpy_device.so -Wl,--export-dynamic + pushd ../python3 ~/RPM/BUILD/python3 ~/RPM/BUILD/python-module-rpy2-2.7.8 + CFLAGS='-pipe -Wall -g -O2 -fno-strict-aliasing' + export CFLAGS + CXXFLAGS='-pipe -Wall -g -O2 -fno-strict-aliasing' + export CXXFLAGS + FFLAGS='-pipe -Wall -g -O2 -fno-strict-aliasing' + export FFLAGS + python3 setup.py build --debug R version 3.4.3 (2017-11-30) -- "Kite-Eating Tree" /usr/lib64/R/bin/R CMD config --ldflags /usr/lib64/R/bin/R CMD config --cppflags Compilation parameters for rpy2's C components: include_dirs = ['/usr/include/R'] library_dirs = ['/usr/local/lib64', '/usr/lib64/R/lib'] libraries = ['R', 'pcre', 'lzma', 'bz2', 'z', 'rt', 'dl', 'm', 'icuuc', 'icui18n'] extra_link_args = ['-Wl,--export-dynamic'] running build running build_py creating build creating build/lib.linux-x86_64-3.5 creating build/lib.linux-x86_64-3.5/rpy2 copying ./rpy/tests_rpy_classic.py -> build/lib.linux-x86_64-3.5/rpy2 copying ./rpy/tests.py -> build/lib.linux-x86_64-3.5/rpy2 copying ./rpy/rpy_classic.py -> build/lib.linux-x86_64-3.5/rpy2 copying ./rpy/__init__.py -> build/lib.linux-x86_64-3.5/rpy2 creating build/lib.linux-x86_64-3.5/rpy2/rlike copying ./rpy/rlike/indexing.py -> build/lib.linux-x86_64-3.5/rpy2/rlike copying ./rpy/rlike/functional.py -> build/lib.linux-x86_64-3.5/rpy2/rlike copying ./rpy/rlike/container.py -> build/lib.linux-x86_64-3.5/rpy2/rlike copying ./rpy/rlike/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/rlike creating build/lib.linux-x86_64-3.5/rpy2/rlike/tests copying ./rpy/rlike/tests/test_indexing.py -> build/lib.linux-x86_64-3.5/rpy2/rlike/tests copying ./rpy/rlike/tests/test_functional.py -> build/lib.linux-x86_64-3.5/rpy2/rlike/tests copying ./rpy/rlike/tests/test_container.py -> build/lib.linux-x86_64-3.5/rpy2/rlike/tests copying ./rpy/rlike/tests/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/rlike/tests creating build/lib.linux-x86_64-3.5/rpy2/rinterface copying ./rpy/rinterface/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface creating build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpVectorNumeric.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpVector.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpSymbol.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpExtPtr.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpEnvironment.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_SexpClosure.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_Sexp.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_EmbeddedR.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/test_Device.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests copying ./rpy/rinterface/tests/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/rinterface/tests creating build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/vectors.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/robject.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/pandas2ri.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/packages_utils.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/packages.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/numpy2ri.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/methods.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/language.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/help.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/functions.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/environments.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/conversion.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/constants.py -> build/lib.linux-x86_64-3.5/rpy2/robjects copying ./rpy/robjects/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/robjects creating build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testVector.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testRobjects.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testRObject.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testPandasConversions.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testPackages.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testNumpyConversions.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testMethods.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testLanguage.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testHelp.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testFunction.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testFormula.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testEnvironment.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testDataFrame.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/testArray.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests copying ./rpy/robjects/tests/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/tests creating build/lib.linux-x86_64-3.5/rpy2/robjects/lib copying ./rpy/robjects/lib/grid.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/lib copying ./rpy/robjects/lib/ggplot2.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/lib copying ./rpy/robjects/lib/dplyr.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/lib copying ./rpy/robjects/lib/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/lib creating build/lib.linux-x86_64-3.5/rpy2/robjects/lib/tests copying ./rpy/robjects/lib/tests/test_ggplot2.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/lib/tests copying ./rpy/robjects/lib/tests/test_dplyr.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/lib/tests copying ./rpy/robjects/lib/tests/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/robjects/lib/tests creating build/lib.linux-x86_64-3.5/rpy2/interactive copying ./rpy/interactive/process_revents.py -> build/lib.linux-x86_64-3.5/rpy2/interactive copying ./rpy/interactive/packages.py -> build/lib.linux-x86_64-3.5/rpy2/interactive copying ./rpy/interactive/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/interactive creating build/lib.linux-x86_64-3.5/rpy2/interactive/tests copying ./rpy/interactive/tests/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/interactive/tests creating build/lib.linux-x86_64-3.5/rpy2/ipython copying ./rpy/ipython/rmagic.py -> build/lib.linux-x86_64-3.5/rpy2/ipython copying ./rpy/ipython/html.py -> build/lib.linux-x86_64-3.5/rpy2/ipython copying ./rpy/ipython/ggplot.py -> build/lib.linux-x86_64-3.5/rpy2/ipython copying ./rpy/ipython/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/ipython creating build/lib.linux-x86_64-3.5/rpy2/ipython/tests copying ./rpy/ipython/tests/test_rmagic.py -> build/lib.linux-x86_64-3.5/rpy2/ipython/tests copying ./rpy/ipython/tests/__init__.py -> build/lib.linux-x86_64-3.5/rpy2/ipython/tests running build_clib building 'r_utils' library creating build/temp.linux-x86_64-3.5 creating build/temp.linux-x86_64-3.5/rpy creating build/temp.linux-x86_64-3.5/rpy/rinterface x86_64-alt-linux-gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -pipe -Wall -g -O2 -fno-strict-aliasing -fPIC -g -I./rpy/rinterface -I/usr/include/R -c ./rpy/rinterface/r_utils.c -o build/temp.linux-x86_64-3.5/./rpy/rinterface/r_utils.o In file included from /usr/include/R/Rdefines.h:36:0, from ./rpy/rinterface/r_utils.c:31: /usr/include/R/R_ext/Memory.h:48:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int R_gc_running(); ^ In file included from /usr/include/R/Rinternals.h:51:0, from /usr/include/R/Rdefines.h:40, from ./rpy/rinterface/r_utils.c:31: /usr/include/R/R_ext/Rdynload.h:38:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] typedef void * (*DL_FUNC)(); ^ In file included from /usr/include/R/Rdefines.h:40:0, from ./rpy/rinterface/r_utils.c:31: /usr/include/R/Rinternals.h:919:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] const char *R_curErrorBuf(); ^ ar rc build/temp.linux-x86_64-3.5/libr_utils.a build/temp.linux-x86_64-3.5/./rpy/rinterface/r_utils.o running build_ext R version 3.4.3 (2017-11-30) -- "Kite-Eating Tree" building 'rpy2.rinterface._rinterface' extension x86_64-alt-linux-gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -pipe -Wall -g -O2 -fno-strict-aliasing -fPIC -g -DR_INTERFACE_PTRS=1 -DHAVE_POSIX_SIGJMP=1 -DRIF_HAS_RSIGHAND=1 -DCSTACK_DEFNS=1 -DHAS_READLINE=1 -I./rpy/rinterface -I/usr/include/R -I/usr/include/python3.5m -c ./rpy/rinterface/_rinterface.c -o build/temp.linux-x86_64-3.5/./rpy/rinterface/_rinterface.o In file included from /usr/include/R/R.h:87:0, from ./rpy/rinterface/_rinterface.h:8, from ./rpy/rinterface/_rinterface.c:58: /usr/include/R/R_ext/Memory.h:48:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int R_gc_running(); ^ In file included from /usr/include/R/Rinternals.h:51:0, from ./rpy/rinterface/_rinterface.h:9, from ./rpy/rinterface/_rinterface.c:58: /usr/include/R/R_ext/Rdynload.h:38:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] typedef void * (*DL_FUNC)(); ^ In file included from ./rpy/rinterface/_rinterface.h:9:0, from ./rpy/rinterface/_rinterface.c:58: /usr/include/R/Rinternals.h:919:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] const char *R_curErrorBuf(); ^ In file included from ./rpy/rinterface/_rinterface.c:70:0: /usr/include/R/Rinterface.h:157:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] extern void (*ptr_R_ProcessEvents)(); ^ In file included from ./rpy/rinterface/_rinterface.c:122:0: ./rpy/rinterface/embeddedr.c: In function 'SexpObject_clear': ./rpy/rinterface/embeddedr.c:48:12: warning: unused variable 'res' [-Wunused-variable] SEXP res = rpy2_remove(Rf_mkString(name_buf), ^ In file included from ./rpy/rinterface/_rinterface.c:125:0: ./rpy/rinterface/sexp.c: In function 'Sexp_init': ./rpy/rinterface/sexp.c:738:13: warning: unused variable 'copy' [-Wunused-variable] PyObject *copy = Py_True; ^ In file included from ./rpy/rinterface/_rinterface.c:128:0: ./rpy/rinterface/sequence.c: In function 'VectorSexp_ass_slice': ./rpy/rinterface/sequence.c:461:11: warning: variable 'len_R' set but not used [-Wunused-but-set-variable] R_len_t len_R; ^ In file included from ./rpy/rinterface/_rinterface.c:58:0: ./rpy/rinterface/_rinterface.c: At top level: ./rpy/rinterface/_rinterface.h:203:44: warning: 'PyRinterface_IsInitialized' declared 'static' but never defined [-Wunused-function] static PyRinterface_IsInitialized_RETURN PyRinterface_IsInitialized PyRinterface_IsInitialized_PROTO; ^ ./rpy/rinterface/_rinterface.h:204:38: warning: 'PyRinterface_FindFun' declared 'static' but never defined [-Wunused-function] static PyRinterface_FindFun_RETURN PyRinterface_FindFun PyRinterface_FindFun_PROTO; ^ ./rpy/rinterface/_rinterface.h:205:20: warning: 'embeddedR_isInitialized' defined but not used [-Wunused-variable] static PyObject *embeddedR_isInitialized; ^ In file included from ./rpy/rinterface/_rinterface.c:128:0: ./rpy/rinterface/sequence.c:2168:1: warning: 'ComplexVectorSexp_AsSexp' defined but not used [-Wunused-function] ComplexVectorSexp_AsSexp(PyObject *pyfloat) { ^ In file included from ./rpy/rinterface/_rinterface.c:58:0: ./rpy/rinterface/_rinterface.c: In function 'EmbeddedR_ShowFiles': ./rpy/rinterface/_rinterface.h:72:5: warning: 'gstate' may be used uninitialized in this function [-Wmaybe-uninitialized] PyGILState_Release(gstate); \ ^ ./rpy/rinterface/_rinterface.c:837:20: note: 'gstate' was declared here PyGILState_STATE gstate; ^ In file included from ./rpy/rinterface/_rinterface.c:58:0: ./rpy/rinterface/_rinterface.c: In function 'EmbeddedR_ResetConsole': ./rpy/rinterface/_rinterface.h:72:5: warning: 'gstate' may be used uninitialized in this function [-Wmaybe-uninitialized] PyGILState_Release(gstate); \ ^ ./rpy/rinterface/_rinterface.c:683:20: note: 'gstate' was declared here PyGILState_STATE gstate; ^ ./rpy/rinterface/_rinterface.c: In function 'EmbeddedR_WriteConsoleEx': ./rpy/rinterface/_rinterface.c:383:10: warning: 'consolecallback' may be used uninitialized in this function [-Wmaybe-uninitialized] result = PyEval_CallObject(consolecallback, arglist); ^ In file included from ./rpy/rinterface/_rinterface.c:58:0: ./rpy/rinterface/_rinterface.c: In function 'EmbeddedR_ReadConsole': ./rpy/rinterface/_rinterface.h:72:5: warning: 'gstate' may be used uninitialized in this function [-Wmaybe-uninitialized] PyGILState_Release(gstate); \ ^ ./rpy/rinterface/_rinterface.c:504:20: note: 'gstate' was declared here PyGILState_STATE gstate; ^ In file included from ./rpy/rinterface/_rinterface.c:58:0: ./rpy/rinterface/_rinterface.c: In function 'EmbeddedR_CleanUp': ./rpy/rinterface/_rinterface.h:72:5: warning: 'gstate' may be used uninitialized in this function [-Wmaybe-uninitialized] PyGILState_Release(gstate); \ ^ ./rpy/rinterface/_rinterface.c:985:20: note: 'gstate' was declared here PyGILState_STATE gstate; ^ x86_64-alt-linux-gcc -pthread -shared -pipe -Wall -g -O2 -fno-strict-aliasing -g build/temp.linux-x86_64-3.5/./rpy/rinterface/_rinterface.o -L/usr/local/lib64 -L/usr/lib64/R/lib -Lbuild/temp.linux-x86_64-3.5 -Wl,--enable-new-dtags,-R/usr/local/lib64 -Wl,--enable-new-dtags,-R/usr/lib64/R/lib -lR -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lr_utils -o build/lib.linux-x86_64-3.5/rpy2/rinterface/_rinterface.cpython-35m.so -Wl,--export-dynamic building 'rpy2.rinterface._rpy_device' extension x86_64-alt-linux-gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -pipe -Wall -g -O2 -fno-strict-aliasing -fPIC -g -DR_INTERFACE_PTRS=1 -DHAVE_POSIX_SIGJMP=1 -DRIF_HAS_RSIGHAND=1 -DCSTACK_DEFNS=1 -DHAS_READLINE=1 -I/usr/include/R -Irpy/rinterface -I/usr/include/python3.5m -c ./rpy/rinterface/_rpy_device.c -o build/temp.linux-x86_64-3.5/./rpy/rinterface/_rpy_device.o In file included from /usr/include/R/R.h:87:0, from ./rpy/rinterface/_rpy_device.c:32: /usr/include/R/R_ext/Memory.h:48:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int R_gc_running(); ^ In file included from /usr/include/R/Rinternals.h:51:0, from ./rpy/rinterface/_rpy_device.c:33: /usr/include/R/R_ext/Rdynload.h:38:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] typedef void * (*DL_FUNC)(); ^ In file included from ./rpy/rinterface/_rpy_device.c:33:0: /usr/include/R/Rinternals.h:919:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] const char *R_curErrorBuf(); ^ ./rpy/rinterface/_rpy_device.c: In function 'PyInit__rpy_device': ./rpy/rinterface/_rpy_device.c:1407:17: warning: variable 'd' set but not used [-Wunused-but-set-variable] PyObject *m, *d; ^ ./rpy/rinterface/_rpy_device.c: At top level: ./rpy/rinterface/_rpy_device.c:936:1: warning: 'GrDev_clear' defined but not used [-Wunused-function] GrDev_clear(PyGrDevObject *self) ^ ./rpy/rinterface/_rpy_device.c:1334:20: warning: 'rpydevice_methods' defined but not used [-Wunused-variable] static PyMethodDef rpydevice_methods[] = { ^ x86_64-alt-linux-gcc -pthread -shared -pipe -Wall -g -O2 -fno-strict-aliasing -g build/temp.linux-x86_64-3.5/./rpy/rinterface/_rpy_device.o -L/usr/local/lib64 -L/usr/lib64/R/lib -Lbuild/temp.linux-x86_64-3.5 -Wl,--enable-new-dtags,-R/usr/local/lib64 -Wl,--enable-new-dtags,-R/usr/lib64/R/lib -lR -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lr_utils -o build/lib.linux-x86_64-3.5/rpy2/rinterface/_rpy_device.cpython-35m.so -Wl,--export-dynamic + popd ~/RPM/BUILD/python-module-rpy2-2.7.8 + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.45887 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/python-module-rpy2-buildroot + : + /bin/rm -rf -- /usr/src/tmp/python-module-rpy2-buildroot + cd python-module-rpy2-2.7.8 + /usr/bin/python2.7 setup.py install --skip-build --root=/usr/src/tmp/python-module-rpy2-buildroot --force R version 3.4.3 (2017-11-30) -- "Kite-Eating Tree" /usr/lib64/R/bin/R CMD config --ldflags /usr/lib64/R/bin/R CMD config --cppflags Compilation parameters for rpy2's C components: include_dirs = ['/usr/include/R'] library_dirs = ['/usr/local/lib64', '/usr/lib64/R/lib'] libraries = ['R', 'pcre', 'lzma', 'bz2', 'z', 'rt', 'dl', 'm', 'icuuc', 'icui18n'] extra_link_args = ['-Wl,--export-dynamic'] running install running install_lib creating /usr/src/tmp/python-module-rpy2-buildroot creating /usr/src/tmp/python-module-rpy2-buildroot/usr creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64 creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7 creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2 creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/tests copying build/lib.linux-x86_64-2.7/rpy2/ipython/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/tests copying build/lib.linux-x86_64-2.7/rpy2/ipython/tests/test_rmagic.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/tests copying build/lib.linux-x86_64-2.7/rpy2/ipython/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython copying build/lib.linux-x86_64-2.7/rpy2/ipython/ggplot.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython copying build/lib.linux-x86_64-2.7/rpy2/ipython/html.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython copying build/lib.linux-x86_64-2.7/rpy2/ipython/rmagic.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive/tests copying build/lib.linux-x86_64-2.7/rpy2/interactive/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive/tests copying build/lib.linux-x86_64-2.7/rpy2/interactive/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive copying build/lib.linux-x86_64-2.7/rpy2/interactive/packages.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive copying build/lib.linux-x86_64-2.7/rpy2/interactive/process_revents.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/lib/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/lib/tests/test_dplyr.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/lib/tests/test_ggplot2.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/lib/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib copying build/lib.linux-x86_64-2.7/rpy2/robjects/lib/dplyr.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib copying build/lib.linux-x86_64-2.7/rpy2/robjects/lib/ggplot2.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib copying build/lib.linux-x86_64-2.7/rpy2/robjects/lib/grid.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testArray.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testDataFrame.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testEnvironment.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testFormula.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testFunction.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testHelp.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testLanguage.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testMethods.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testNumpyConversions.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testPackages.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testPandasConversions.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testRObject.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testRobjects.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/tests/testVector.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-2.7/rpy2/robjects/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/constants.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/conversion.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/environments.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/functions.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/help.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/language.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/methods.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/numpy2ri.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/packages.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/packages_utils.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/pandas2ri.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/robject.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects copying build/lib.linux-x86_64-2.7/rpy2/robjects/vectors.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface copying build/lib.linux-x86_64-2.7/rpy2/rinterface/_rpy_device.so -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface copying build/lib.linux-x86_64-2.7/rpy2/rinterface/_rinterface.so -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/test_Device.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/test_EmbeddedR.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/test_Sexp.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/test_SexpClosure.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/test_SexpEnvironment.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/test_SexpExtPtr.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/test_SexpSymbol.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/test_SexpVector.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/tests/test_SexpVectorNumeric.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-2.7/rpy2/rinterface/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-2.7/rpy2/rlike/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-2.7/rpy2/rlike/tests/test_container.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-2.7/rpy2/rlike/tests/test_functional.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-2.7/rpy2/rlike/tests/test_indexing.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-2.7/rpy2/rlike/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike copying build/lib.linux-x86_64-2.7/rpy2/rlike/container.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike copying build/lib.linux-x86_64-2.7/rpy2/rlike/functional.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike copying build/lib.linux-x86_64-2.7/rpy2/rlike/indexing.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike copying build/lib.linux-x86_64-2.7/rpy2/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2 copying build/lib.linux-x86_64-2.7/rpy2/rpy_classic.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2 copying build/lib.linux-x86_64-2.7/rpy2/tests.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2 copying build/lib.linux-x86_64-2.7/rpy2/tests_rpy_classic.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2 byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/tests/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/tests/test_rmagic.py to test_rmagic.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/ggplot.py to ggplot.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/html.py to html.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/rmagic.py to rmagic.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive/tests/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive/packages.py to packages.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/interactive/process_revents.py to process_revents.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/tests/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/tests/test_dplyr.py to test_dplyr.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/tests/test_ggplot2.py to test_ggplot2.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/dplyr.py to dplyr.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/ggplot2.py to ggplot2.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/grid.py to grid.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testArray.py to testArray.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testDataFrame.py to testDataFrame.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testEnvironment.py to testEnvironment.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testFormula.py to testFormula.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testFunction.py to testFunction.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testHelp.py to testHelp.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testLanguage.py to testLanguage.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testMethods.py to testMethods.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testNumpyConversions.py to testNumpyConversions.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testPackages.py to testPackages.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testPandasConversions.py to testPandasConversions.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testRObject.py to testRObject.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testRobjects.py to testRobjects.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/tests/testVector.py to testVector.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/constants.py to constants.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/conversion.py to conversion.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/environments.py to environments.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/functions.py to functions.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/help.py to help.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/language.py to language.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/methods.py to methods.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/numpy2ri.py to numpy2ri.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/packages.py to packages.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/packages_utils.py to packages_utils.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/pandas2ri.py to pandas2ri.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/robject.py to robject.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/vectors.py to vectors.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_Device.py to test_Device.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_EmbeddedR.py to test_EmbeddedR.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_Sexp.py to test_Sexp.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpClosure.py to test_SexpClosure.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpEnvironment.py to test_SexpEnvironment.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpExtPtr.py to test_SexpExtPtr.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpSymbol.py to test_SexpSymbol.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpVector.py to test_SexpVector.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/tests/test_SexpVectorNumeric.py to test_SexpVectorNumeric.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rinterface/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/tests/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/tests/test_container.py to test_container.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/tests/test_functional.py to test_functional.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/tests/test_indexing.py to test_indexing.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/container.py to container.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/functional.py to functional.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rlike/indexing.py to indexing.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/rpy_classic.py to rpy_classic.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/tests.py to tests.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/tests_rpy_classic.py to tests_rpy_classic.pyc running install_egg_info running egg_info creating rpy2.egg-info writing requirements to rpy2.egg-info/requires.txt writing rpy2.egg-info/PKG-INFO writing top-level names to rpy2.egg-info/top_level.txt writing dependency_links to rpy2.egg-info/dependency_links.txt writing manifest file 'rpy2.egg-info/SOURCES.txt' R version 3.4.3 (2017-11-30) -- "Kite-Eating Tree" reading manifest file 'rpy2.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README' anywhere in distribution warning: no previously-included files matching '*patch*' found anywhere in distribution warning: no previously-included files matching '*diff*' found anywhere in distribution warning: no previously-included files matching '.hg' found anywhere in distribution warning: no files found matching 'MANIFEST' warning: no files found matching 'README' warning: no files found matching 'MPL_LICENSE' warning: no files found matching 'GPL_LICENSE' warning: no files found matching 'LGPL_LICENSE' no previously-included directories found matching 'dist' warning: no files found matching 'doc/source/rpy2_logo.png' writing manifest file 'rpy2.egg-info/SOURCES.txt' Copying rpy2.egg-info to /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2-2.7.8-py2.7.egg-info running install_scripts + pushd ../python3 ~/RPM/BUILD/python3 ~/RPM/BUILD/python-module-rpy2-2.7.8 + python3 setup.py install --skip-build --root=/usr/src/tmp/python-module-rpy2-buildroot --force R version 3.4.3 (2017-11-30) -- "Kite-Eating Tree" /usr/lib64/R/bin/R CMD config --ldflags /usr/lib64/R/bin/R CMD config --cppflags Compilation parameters for rpy2's C components: include_dirs = ['/usr/include/R'] library_dirs = ['/usr/local/lib64', '/usr/lib64/R/lib'] libraries = ['R', 'pcre', 'lzma', 'bz2', 'z', 'rt', 'dl', 'm', 'icuuc', 'icui18n'] extra_link_args = ['-Wl,--export-dynamic'] running install running install_lib creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3 creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2 creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython/tests copying build/lib.linux-x86_64-3.5/rpy2/ipython/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython/tests copying build/lib.linux-x86_64-3.5/rpy2/ipython/tests/test_rmagic.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython/tests copying build/lib.linux-x86_64-3.5/rpy2/ipython/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython copying build/lib.linux-x86_64-3.5/rpy2/ipython/ggplot.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython copying build/lib.linux-x86_64-3.5/rpy2/ipython/html.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython copying build/lib.linux-x86_64-3.5/rpy2/ipython/rmagic.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive/tests copying build/lib.linux-x86_64-3.5/rpy2/interactive/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive/tests copying build/lib.linux-x86_64-3.5/rpy2/interactive/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive copying build/lib.linux-x86_64-3.5/rpy2/interactive/packages.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive copying build/lib.linux-x86_64-3.5/rpy2/interactive/process_revents.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/lib/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/lib/tests/test_dplyr.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/lib/tests/test_ggplot2.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/lib/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib copying build/lib.linux-x86_64-3.5/rpy2/robjects/lib/dplyr.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib copying build/lib.linux-x86_64-3.5/rpy2/robjects/lib/ggplot2.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib copying build/lib.linux-x86_64-3.5/rpy2/robjects/lib/grid.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testArray.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testDataFrame.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testEnvironment.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testFormula.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testFunction.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testHelp.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testLanguage.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testMethods.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testNumpyConversions.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testPackages.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testPandasConversions.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testRObject.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testRobjects.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/tests/testVector.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests copying build/lib.linux-x86_64-3.5/rpy2/robjects/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/constants.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/conversion.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/environments.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/functions.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/help.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/language.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/methods.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/numpy2ri.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/packages.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/packages_utils.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/pandas2ri.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/robject.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects copying build/lib.linux-x86_64-3.5/rpy2/robjects/vectors.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface copying build/lib.linux-x86_64-3.5/rpy2/rinterface/_rpy_device.cpython-35m.so -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface copying build/lib.linux-x86_64-3.5/rpy2/rinterface/_rinterface.cpython-35m.so -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/test_Device.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/test_EmbeddedR.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/test_Sexp.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/test_SexpClosure.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/test_SexpEnvironment.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/test_SexpExtPtr.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/test_SexpSymbol.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/test_SexpVector.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/tests/test_SexpVectorNumeric.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests copying build/lib.linux-x86_64-3.5/rpy2/rinterface/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike creating /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-3.5/rpy2/rlike/tests/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-3.5/rpy2/rlike/tests/test_container.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-3.5/rpy2/rlike/tests/test_functional.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-3.5/rpy2/rlike/tests/test_indexing.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/tests copying build/lib.linux-x86_64-3.5/rpy2/rlike/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike copying build/lib.linux-x86_64-3.5/rpy2/rlike/container.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike copying build/lib.linux-x86_64-3.5/rpy2/rlike/functional.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike copying build/lib.linux-x86_64-3.5/rpy2/rlike/indexing.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike copying build/lib.linux-x86_64-3.5/rpy2/__init__.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2 copying build/lib.linux-x86_64-3.5/rpy2/rpy_classic.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2 copying build/lib.linux-x86_64-3.5/rpy2/tests.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2 copying build/lib.linux-x86_64-3.5/rpy2/tests_rpy_classic.py -> /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2 byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython/tests/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython/tests/test_rmagic.py to test_rmagic.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython/ggplot.py to ggplot.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython/html.py to html.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/ipython/rmagic.py to rmagic.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive/tests/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive/packages.py to packages.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/interactive/process_revents.py to process_revents.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/tests/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/tests/test_dplyr.py to test_dplyr.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/tests/test_ggplot2.py to test_ggplot2.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/dplyr.py to dplyr.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/ggplot2.py to ggplot2.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/lib/grid.py to grid.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testArray.py to testArray.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testDataFrame.py to testDataFrame.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testEnvironment.py to testEnvironment.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testFormula.py to testFormula.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testFunction.py to testFunction.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testHelp.py to testHelp.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testLanguage.py to testLanguage.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testMethods.py to testMethods.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testNumpyConversions.py to testNumpyConversions.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testPackages.py to testPackages.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testPandasConversions.py to testPandasConversions.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testRObject.py to testRObject.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testRobjects.py to testRobjects.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/tests/testVector.py to testVector.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/constants.py to constants.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/conversion.py to conversion.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/environments.py to environments.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/functions.py to functions.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/help.py to help.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/language.py to language.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/methods.py to methods.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/numpy2ri.py to numpy2ri.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/packages.py to packages.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/packages_utils.py to packages_utils.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/pandas2ri.py to pandas2ri.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/robject.py to robject.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/robjects/vectors.py to vectors.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/test_Device.py to test_Device.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/test_EmbeddedR.py to test_EmbeddedR.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/test_Sexp.py to test_Sexp.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/test_SexpClosure.py to test_SexpClosure.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/test_SexpEnvironment.py to test_SexpEnvironment.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/test_SexpExtPtr.py to test_SexpExtPtr.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/test_SexpSymbol.py to test_SexpSymbol.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/test_SexpVector.py to test_SexpVector.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/tests/test_SexpVectorNumeric.py to test_SexpVectorNumeric.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rinterface/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/tests/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/tests/test_container.py to test_container.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/tests/test_functional.py to test_functional.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/tests/test_indexing.py to test_indexing.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/container.py to container.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/functional.py to functional.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rlike/indexing.py to indexing.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/__init__.py to __init__.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/rpy_classic.py to rpy_classic.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/tests.py to tests.cpython-35.pyc byte-compiling /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2/tests_rpy_classic.py to tests_rpy_classic.cpython-35.pyc running install_egg_info running egg_info creating rpy2.egg-info writing dependency_links to rpy2.egg-info/dependency_links.txt writing rpy2.egg-info/PKG-INFO writing requirements to rpy2.egg-info/requires.txt writing top-level names to rpy2.egg-info/top_level.txt writing manifest file 'rpy2.egg-info/SOURCES.txt' R version 3.4.3 (2017-11-30) -- "Kite-Eating Tree" reading manifest file 'rpy2.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README' anywhere in distribution warning: no previously-included files matching '*patch*' found anywhere in distribution warning: no previously-included files matching '*diff*' found anywhere in distribution warning: no previously-included files matching '.hg' found anywhere in distribution warning: no files found matching 'MANIFEST' warning: no files found matching 'README' warning: no files found matching 'MPL_LICENSE' warning: no files found matching 'GPL_LICENSE' warning: no files found matching 'LGPL_LICENSE' no previously-included directories found matching 'dist' warning: no files found matching 'doc/source/rpy2_logo.png' writing manifest file 'rpy2.egg-info/SOURCES.txt' Copying rpy2.egg-info to /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python3/site-packages/rpy2-2.7.8-py3.5.egg-info running install_scripts + popd ~/RPM/BUILD/python-module-rpy2-2.7.8 + export PYTHONPATH=/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages + PYTHONPATH=/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages + sphinx-apidoc -o doc -F rpy Creating file doc/rpy.rst. Creating file doc/rpy.interactive.rst. Creating file doc/rpy.interactive.tests.rst. Creating file doc/rpy.ipython.rst. Creating file doc/rpy.ipython.tests.rst. Creating file doc/rpy.rinterface.rst. Creating file doc/rpy.rinterface.tests.rst. Creating file doc/rpy.rlike.rst. Creating file doc/rpy.rlike.tests.rst. Creating file doc/rpy.robjects.rst. Creating file doc/rpy.robjects.lib.rst. Creating file doc/rpy.robjects.lib.tests.rst. Creating file doc/rpy.robjects.tests.rst. File doc/conf.py already exists, skipping. File doc/index.rst already exists, skipping. File doc/Makefile already exists, skipping. File doc/make.bat already exists, skipping. + make -C doc pickle make: Entering directory `/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc' sphinx-build -b pickle -d _build/doctrees . _build/pickle Running Sphinx v1.4a0+ making output directory... loading pickled environment... not yet created loading intersphinx inventory from objects.inv... building [mo]: targets for 0 po files that are out of date building [pickle]: targets for 51 source files that are out of date updating environment: 51 added, 0 changed, 0 removed reading sources... [ 1%] appendix reading sources... [ 3%] callbacks reading sources... [ 5%] changes reading sources... [ 7%] generated_rst/dplyr reading sources... [ 9%] generated_rst/introduction reading sources... [ 11%] generated_rst/s4class reading sources... [ 13%] generated_rst/tutorial reading sources... [ 15%] getting-started reading sources... [ 17%] graphicaldevices reading sources... [ 19%] graphics /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/packages.py:438: UserWarning: Error in loadNamespace(name) : there is no package called 'ggplot2' env = _get_namespace(rname) reading sources... [ 21%] high-level reading sources... [ 23%] index reading sources... [ 25%] interactive /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/rmagic.py:76: UserWarning: The Python package 'pandas' is strongly recommended when using `rpy2.ipython`. Unfortunately it could not be loaded, and we did not manage to load 'numpy' either. "either."))) reading sources... [ 27%] introduction reading sources... [ 29%] lib_dplyr reading sources... [ 31%] miscellaneous reading sources... [ 33%] numpy reading sources... [ 35%] overview reading sources... [ 37%] performances reading sources... [ 39%] porting-to-rpy2 reading sources... [ 41%] related_projects reading sources... [ 43%] rhelp reading sources... [ 45%] rinterface reading sources... [ 47%] rlike reading sources... [ 49%] robjects reading sources... [ 50%] robjects_convert reading sources... [ 52%] robjects_environments reading sources... [ 54%] robjects_formulae reading sources... [ 56%] robjects_functions reading sources... [ 58%] robjects_oop reading sources... [ 60%] robjects_overview reading sources... [ 62%] robjects_rinstance reading sources... [ 64%] robjects_robjects reading sources... [ 66%] robjects_rpackages reading sources... [ 68%] robjects_serialization reading sources... [ 70%] rpy reading sources... [ 72%] rpy.interactive reading sources... [ 74%] rpy.interactive.tests reading sources... [ 76%] rpy.ipython reading sources... [ 78%] rpy.ipython.tests reading sources... [ 80%] rpy.rinterface reading sources... [ 82%] rpy.rinterface.tests reading sources... [ 84%] rpy.rlike reading sources... [ 86%] rpy.rlike.tests reading sources... [ 88%] rpy.robjects reading sources... [ 90%] rpy.robjects.lib reading sources... [ 92%] rpy.robjects.lib.tests reading sources... [ 94%] rpy.robjects.tests reading sources... [ 96%] rpy_classic reading sources... [ 98%] server reading sources... [100%] vector ../NEWS:140: ERROR: Unknown interpreted text role "method". /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:127: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:180: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:249: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:340: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:366: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:387: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:428: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:429: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:433: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:434: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:436: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:437: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:441: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:446: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:583: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/\\_static/demos/example01.py' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:440: WARNING: image file not readable: generated_rst/\_static/graphics\_ggplot2\_smoothbycylwithcolours.png /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/graphics.rst:515: WARNING: autodoc: failed to import module u'rpy2.robjects.lib.ggplot2'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) File "/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/ggplot2.py", line 55, in ggplot2 = importr('ggplot2') File "/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/packages.py", line 438, in importr env = _get_namespace(rname) RRuntimeError: Error in loadNamespace(name) : there is no package called 'ggplot2' /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/interactive.rst:21: WARNING: autodoc: failed to import module u'rpy2.ipython.rmagic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) File "/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/__init__.py", line 1, in from .rmagic import load_ipython_extension File "/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/rmagic.py", line 81, in from IPython.core.displaypub import publish_display_data ImportError: No module named IPython.core.displaypub /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:121: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:174: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:243: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:334: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:360: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:381: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:422: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:423: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:427: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:428: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:430: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:431: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:435: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:440: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:499: WARNING: Line block ends without a blank line. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:577: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/\\_static/demos/example01.py' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:434: WARNING: image file not readable: *static/graphics*\ggplot2\_smoothbycylwithcolours.png /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:21: WARNING: autodoc: failed to import module u'rpy.rpy_classic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rpy_classic /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:29: WARNING: autodoc: failed to import module u'rpy.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:37: WARNING: autodoc: failed to import module u'rpy.tests_rpy_classic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.tests_rpy_classic /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:46: WARNING: autodoc: failed to import module u'rpy'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.interactive.rst:17: WARNING: autodoc: failed to import module u'rpy.interactive.packages'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.interactive.packages /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.interactive.rst:25: WARNING: autodoc: failed to import module u'rpy.interactive.process_revents'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.interactive.process_revents /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.interactive.rst:34: WARNING: autodoc: failed to import module u'rpy.interactive'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.interactive /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.interactive.tests.rst:7: WARNING: autodoc: failed to import module u'rpy.interactive.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.interactive.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.rst:17: WARNING: autodoc: failed to import module u'rpy.ipython.ggplot'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.ggplot /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.rst:25: WARNING: autodoc: failed to import module u'rpy.ipython.html'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.html /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.rst:33: WARNING: autodoc: failed to import module u'rpy.ipython.rmagic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.rmagic /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.rst:42: WARNING: autodoc: failed to import module u'rpy.ipython'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.ipython.tests.test_rmagic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.tests.test_rmagic /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.tests.rst:19: WARNING: autodoc: failed to import module u'rpy.ipython.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.rst:14: WARNING: autodoc: failed to import module u'rpy.rinterface'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_Device'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_Device /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:18: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_EmbeddedR'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_EmbeddedR /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:26: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_Sexp'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_Sexp /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:34: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpClosure'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpClosure /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:42: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpEnvironment'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpEnvironment /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:50: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpExtPtr'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpExtPtr /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:58: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpSymbol'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpSymbol /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:66: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpVector'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpVector /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:74: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpVectorNumeric'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpVectorNumeric /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:83: WARNING: autodoc: failed to import module u'rpy.rinterface.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.rst:17: WARNING: autodoc: failed to import module u'rpy.rlike.container'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.container /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.rst:25: WARNING: autodoc: failed to import module u'rpy.rlike.functional'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.functional /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.rst:33: WARNING: autodoc: failed to import module u'rpy.rlike.indexing'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.indexing /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.rst:42: WARNING: autodoc: failed to import module u'rpy.rlike'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.rlike.tests.test_container'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.tests.test_container /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.tests.rst:18: WARNING: autodoc: failed to import module u'rpy.rlike.tests.test_functional'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.tests.test_functional /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.tests.rst:26: WARNING: autodoc: failed to import module u'rpy.rlike.tests.test_indexing'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.tests.test_indexing /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.tests.rst:35: WARNING: autodoc: failed to import module u'rpy.rlike.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:18: WARNING: autodoc: failed to import module u'rpy.robjects.constants'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.constants /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:26: WARNING: autodoc: failed to import module u'rpy.robjects.conversion'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.conversion /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:34: WARNING: autodoc: failed to import module u'rpy.robjects.environments'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.environments /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:42: WARNING: autodoc: failed to import module u'rpy.robjects.functions'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.functions /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:50: WARNING: autodoc: failed to import module u'rpy.robjects.help'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.help /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:58: WARNING: autodoc: failed to import module u'rpy.robjects.language'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.language /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:66: WARNING: autodoc: failed to import module u'rpy.robjects.methods'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.methods /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:74: WARNING: autodoc: failed to import module u'rpy.robjects.numpy2ri'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.numpy2ri /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:82: WARNING: autodoc: failed to import module u'rpy.robjects.packages'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.packages /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:90: WARNING: autodoc: failed to import module u'rpy.robjects.packages_utils'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.packages_utils /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:98: WARNING: autodoc: failed to import module u'rpy.robjects.pandas2ri'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.pandas2ri /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:106: WARNING: autodoc: failed to import module u'rpy.robjects.robject'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.robject /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:114: WARNING: autodoc: failed to import module u'rpy.robjects.vectors'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.vectors /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:123: WARNING: autodoc: failed to import module u'rpy.robjects'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.rst:17: WARNING: autodoc: failed to import module u'rpy.robjects.lib.dplyr'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.dplyr /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.rst:25: WARNING: autodoc: failed to import module u'rpy.robjects.lib.ggplot2'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.ggplot2 /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.rst:33: WARNING: autodoc: failed to import module u'rpy.robjects.lib.grid'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.grid /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.rst:42: WARNING: autodoc: failed to import module u'rpy.robjects.lib'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.robjects.lib.tests.test_dplyr'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.tests.test_dplyr /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.tests.rst:18: WARNING: autodoc: failed to import module u'rpy.robjects.lib.tests.test_ggplot2'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.tests.test_ggplot2 /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.tests.rst:27: WARNING: autodoc: failed to import module u'rpy.robjects.lib.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testArray'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testArray /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:18: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testDataFrame'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testDataFrame /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:26: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testEnvironment'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testEnvironment /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:34: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testFormula'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testFormula /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:42: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testFunction'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testFunction /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:50: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testHelp'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testHelp /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:58: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testLanguage'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testLanguage /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:66: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testMethods'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testMethods /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:74: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testNumpyConversions'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testNumpyConversions /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:82: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testPackages'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testPackages /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:90: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testPandasConversions'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testPandasConversions /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:98: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testRObject'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testRObject /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:106: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testRobjects'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testRobjects /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:114: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testVector'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testVector /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:123: WARNING: autodoc: failed to import module u'rpy.robjects.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests looking for now-outdated files... none found pickling environment... done checking consistency... /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/dplyr.rst:: WARNING: document isn't included in any toctree /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:: WARNING: document isn't included in any toctree /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/tutorial.rst:: WARNING: document isn't included in any toctree /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 1%] appendix writing output... [ 3%] callbacks writing output... [ 5%] changes writing output... [ 7%] generated_rst/dplyr writing output... [ 9%] generated_rst/introduction writing output... [ 11%] generated_rst/s4class writing output... [ 13%] generated_rst/tutorial writing output... [ 15%] getting-started writing output... [ 17%] graphicaldevices writing output... [ 19%] graphics WARNING: dot command 'dot' cannot be run (needed for graphviz output), check the graphviz_dot setting writing output... [ 21%] high-level writing output... [ 23%] index writing output... [ 25%] interactive writing output... [ 27%] introduction writing output... [ 29%] lib_dplyr writing output... [ 31%] miscellaneous writing output... [ 33%] numpy writing output... [ 35%] overview writing output... [ 37%] performances writing output... [ 39%] porting-to-rpy2 writing output... [ 41%] related_projects writing output... [ 43%] rhelp writing output... [ 45%] rinterface writing output... 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[ 94%] rpy.robjects.tests writing output... [ 96%] rpy_classic writing output... [ 98%] server writing output... [100%] vector /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/interactive.rst:128: WARNING: undefined label: introduction-vectors (if the link has no caption the label must precede a section header) /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rinterface.rst:184: WARNING: undefined label: rinterface-memory (if the link has no caption the label must precede a section header) generating indices... genindex py-modindex highlighting module code... [ 7%] rpy2.robjects.packages highlighting module code... [ 14%] rpy2.rlike.container highlighting module code... [ 21%] rpy2.robjects.functions highlighting module code... [ 28%] rpy2.robjects.environments highlighting module code... [ 35%] rpy2.robjects.methods highlighting module code... [ 42%] rpy2.robjects highlighting module code... [ 50%] rpy2.robjects.help highlighting module code... [ 57%] rpy2.robjects.robject highlighting module code... [ 64%] rpy2.rinterface._rinterface highlighting module code... [ 71%] rpy2.rlike.functional highlighting module code... [ 78%] rpy2.rlike.indexing highlighting module code... [ 85%] rpy2.robjects.vectors highlighting module code... [ 92%] rpy2.robjects.lib.grid highlighting module code... [100%] rpy2.rinterface writing additional pages... search copying images... [ 3%] _static/graphics_ggplot2mtcars_coordtrans.png copying images... [ 6%] _static/graphics_ggplot2mtcars.png copying images... [ 9%] _static/graphics_ggplot2_qplot_4.png copying images... [ 12%] _static/graphics_ggplot2histogramfacetcyl.png copying images... [ 15%] _static/graphics_lattice_xyplot_2.png copying images... [ 18%] _static/benchmark_sum.png copying images... [ 21%] _static/graphics_lattice_wireframe_2.png copying images... [ 25%] _static/graphics_ggplot2smoothbycyl.png copying images... [ 28%] _static/rpy2_logo.png copying images... 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Build finished; now you can process the pickle files. make: Leaving directory `/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc' + make -C doc html make: Entering directory `/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc' sphinx-build -b html -d _build/doctrees . _build/html Running Sphinx v1.4a0+ making output directory... loading pickled environment... done loading intersphinx inventory from objects.inv... building [mo]: targets for 0 po files that are out of date building [html]: targets for 51 source files that are out of date updating environment: 0 added, 17 changed, 0 removed reading sources... [ 5%] generated_rst/introduction reading sources... [ 11%] graphics /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/packages.py:438: UserWarning: Error in loadNamespace(name) : there is no package called 'ggplot2' env = _get_namespace(rname) reading sources... 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[100%] rpy.robjects.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:127: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:180: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:249: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:340: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:366: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:387: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:428: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:429: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:433: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:434: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:436: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:437: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:441: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:446: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:583: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/\\_static/demos/example01.py' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:440: WARNING: image file not readable: generated_rst/\_static/graphics\_ggplot2\_smoothbycylwithcolours.png /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/graphics.rst:515: WARNING: autodoc: failed to import module u'rpy2.robjects.lib.ggplot2'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) File "/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/lib/ggplot2.py", line 55, in ggplot2 = importr('ggplot2') File "/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/robjects/packages.py", line 438, in importr env = _get_namespace(rname) RRuntimeError: Error in loadNamespace(name) : there is no package called 'ggplot2' /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/interactive.rst:21: WARNING: autodoc: failed to import module u'rpy2.ipython.rmagic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) File "/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/__init__.py", line 1, in from .rmagic import load_ipython_extension File "/usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ipython/rmagic.py", line 81, in from IPython.core.displaypub import publish_display_data ImportError: No module named IPython.core.displaypub /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:121: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:174: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:243: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:334: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:360: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:381: ERROR: Content block expected for the "note" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:422: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:423: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:427: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:428: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:430: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/\\_static/demos/graphics.py :start-after: #--' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:431: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:435: WARNING: Explicit markup ends without a blank line; unexpected unindent. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:440: ERROR: Content block expected for the "warning" directive; none found. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:499: WARNING: Line block ends without a blank line. /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:577: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/\\_static/demos/example01.py' not found or reading it failed /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/introduction.rst:434: WARNING: image file not readable: *static/graphics*\ggplot2\_smoothbycylwithcolours.png /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:21: WARNING: autodoc: failed to import module u'rpy.rpy_classic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rpy_classic /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:29: WARNING: autodoc: failed to import module u'rpy.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:37: WARNING: autodoc: failed to import module u'rpy.tests_rpy_classic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.tests_rpy_classic /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:46: WARNING: autodoc: failed to import module u'rpy'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.interactive.rst:17: WARNING: autodoc: failed to import module u'rpy.interactive.packages'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.interactive.packages /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.interactive.rst:25: WARNING: autodoc: failed to import module u'rpy.interactive.process_revents'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.interactive.process_revents /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.interactive.rst:34: WARNING: autodoc: failed to import module u'rpy.interactive'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.interactive /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.interactive.tests.rst:7: WARNING: autodoc: failed to import module u'rpy.interactive.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.interactive.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.rst:17: WARNING: autodoc: failed to import module u'rpy.ipython.ggplot'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.ggplot /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.rst:25: WARNING: autodoc: failed to import module u'rpy.ipython.html'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.html /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.rst:33: WARNING: autodoc: failed to import module u'rpy.ipython.rmagic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.rmagic /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.rst:42: WARNING: autodoc: failed to import module u'rpy.ipython'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.ipython.tests.test_rmagic'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.tests.test_rmagic /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.ipython.tests.rst:19: WARNING: autodoc: failed to import module u'rpy.ipython.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.ipython.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.rst:14: WARNING: autodoc: failed to import module u'rpy.rinterface'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_Device'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_Device /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:18: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_EmbeddedR'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_EmbeddedR /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:26: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_Sexp'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_Sexp /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:34: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpClosure'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpClosure /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:42: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpEnvironment'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpEnvironment /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:50: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpExtPtr'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpExtPtr /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:58: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpSymbol'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpSymbol /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:66: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpVector'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpVector /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:74: WARNING: autodoc: failed to import module u'rpy.rinterface.tests.test_SexpVectorNumeric'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests.test_SexpVectorNumeric /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rinterface.tests.rst:83: WARNING: autodoc: failed to import module u'rpy.rinterface.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rinterface.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.rst:17: WARNING: autodoc: failed to import module u'rpy.rlike.container'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.container /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.rst:25: WARNING: autodoc: failed to import module u'rpy.rlike.functional'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.functional /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.rst:33: WARNING: autodoc: failed to import module u'rpy.rlike.indexing'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.indexing /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.rst:42: WARNING: autodoc: failed to import module u'rpy.rlike'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.rlike.tests.test_container'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.tests.test_container /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.tests.rst:18: WARNING: autodoc: failed to import module u'rpy.rlike.tests.test_functional'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.tests.test_functional /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.tests.rst:26: WARNING: autodoc: failed to import module u'rpy.rlike.tests.test_indexing'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.tests.test_indexing /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rlike.tests.rst:35: WARNING: autodoc: failed to import module u'rpy.rlike.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.rlike.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:18: WARNING: autodoc: failed to import module u'rpy.robjects.constants'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.constants /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:26: WARNING: autodoc: failed to import module u'rpy.robjects.conversion'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.conversion /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:34: WARNING: autodoc: failed to import module u'rpy.robjects.environments'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.environments /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:42: WARNING: autodoc: failed to import module u'rpy.robjects.functions'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.functions /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:50: WARNING: autodoc: failed to import module u'rpy.robjects.help'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.help /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:58: WARNING: autodoc: failed to import module u'rpy.robjects.language'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.language /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:66: WARNING: autodoc: failed to import module u'rpy.robjects.methods'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.methods /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:74: WARNING: autodoc: failed to import module u'rpy.robjects.numpy2ri'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.numpy2ri /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:82: WARNING: autodoc: failed to import module u'rpy.robjects.packages'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.packages /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:90: WARNING: autodoc: failed to import module u'rpy.robjects.packages_utils'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.packages_utils /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:98: WARNING: autodoc: failed to import module u'rpy.robjects.pandas2ri'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.pandas2ri /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:106: WARNING: autodoc: failed to import module u'rpy.robjects.robject'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.robject /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:114: WARNING: autodoc: failed to import module u'rpy.robjects.vectors'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.vectors /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.rst:123: WARNING: autodoc: failed to import module u'rpy.robjects'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.rst:17: WARNING: autodoc: failed to import module u'rpy.robjects.lib.dplyr'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.dplyr /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.rst:25: WARNING: autodoc: failed to import module u'rpy.robjects.lib.ggplot2'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.ggplot2 /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.rst:33: WARNING: autodoc: failed to import module u'rpy.robjects.lib.grid'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.grid /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.rst:42: WARNING: autodoc: failed to import module u'rpy.robjects.lib'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.robjects.lib.tests.test_dplyr'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.tests.test_dplyr /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.tests.rst:18: WARNING: autodoc: failed to import module u'rpy.robjects.lib.tests.test_ggplot2'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.tests.test_ggplot2 /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.lib.tests.rst:27: WARNING: autodoc: failed to import module u'rpy.robjects.lib.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.lib.tests /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:10: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testArray'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testArray /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:18: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testDataFrame'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testDataFrame /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:26: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testEnvironment'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testEnvironment /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:34: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testFormula'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testFormula /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:42: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testFunction'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testFunction /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:50: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testHelp'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testHelp /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:58: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testLanguage'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testLanguage /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:66: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testMethods'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testMethods /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:74: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testNumpyConversions'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testNumpyConversions /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:82: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testPackages'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testPackages /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:90: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testPandasConversions'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testPandasConversions /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:98: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testRObject'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testRObject /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:106: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testRobjects'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testRobjects /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:114: WARNING: autodoc: failed to import module u'rpy.robjects.tests.testVector'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests.testVector /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.robjects.tests.rst:123: WARNING: autodoc: failed to import module u'rpy.robjects.tests'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python2.7/site-packages/sphinx/ext/autodoc.py", line 507, in import_object __import__(self.modname) ImportError: No module named rpy.robjects.tests looking for now-outdated files... none found pickling environment... done checking consistency... /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/dplyr.rst:: WARNING: document isn't included in any toctree /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/introduction.rst:: WARNING: document isn't included in any toctree /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/generated_rst/tutorial.rst:: WARNING: document isn't included in any toctree /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rpy.rst:: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 1%] appendix writing output... [ 3%] callbacks writing output... [ 5%] changes writing output... [ 7%] generated_rst/dplyr writing output... [ 9%] generated_rst/introduction writing output... [ 11%] generated_rst/s4class writing output... [ 13%] generated_rst/tutorial writing output... [ 15%] getting-started writing output... [ 17%] graphicaldevices writing output... [ 19%] graphics WARNING: dot command 'dot' cannot be run (needed for graphviz output), check the graphviz_dot setting writing output... [ 21%] high-level writing output... [ 23%] index writing output... [ 25%] interactive writing output... [ 27%] introduction writing output... [ 29%] lib_dplyr writing output... [ 31%] miscellaneous writing output... [ 33%] numpy writing output... [ 35%] overview writing output... [ 37%] performances writing output... [ 39%] porting-to-rpy2 writing output... [ 41%] related_projects writing output... [ 43%] rhelp writing output... [ 45%] rinterface writing output... 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[ 94%] rpy.robjects.tests writing output... [ 96%] rpy_classic writing output... [ 98%] server writing output... [100%] vector /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/interactive.rst:128: WARNING: undefined label: introduction-vectors (if the link has no caption the label must precede a section header) /usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc/rinterface.rst:184: WARNING: undefined label: rinterface-memory (if the link has no caption the label must precede a section header) generating indices... genindex py-modindex highlighting module code... [ 7%] rpy2.robjects.packages highlighting module code... [ 14%] rpy2.rlike.container highlighting module code... [ 21%] rpy2.robjects.environments highlighting module code... [ 28%] rpy2.robjects.methods highlighting module code... [ 35%] rpy2.robjects highlighting module code... [ 42%] rpy2.rinterface highlighting module code... [ 50%] rpy2.robjects.help highlighting module code... [ 57%] rpy2.rinterface._rinterface highlighting module code... [ 64%] rpy2.robjects.robject highlighting module code... [ 71%] rpy2.rlike.functional highlighting module code... [ 78%] rpy2.robjects.functions highlighting module code... [ 85%] rpy2.robjects.vectors highlighting module code... [ 92%] rpy2.robjects.lib.grid highlighting module code... [100%] rpy2.rlike.indexing writing additional pages... search copying images... [ 3%] _static/graphics_ggplot2mtcars_coordtrans.png copying images... [ 6%] _static/graphics_ggplot2mtcars.png copying images... [ 9%] _static/graphics_ggplot2_qplot_4.png copying images... [ 12%] _static/graphics_ggplot2histogramfacetcyl.png copying images... [ 15%] _static/graphics_lattice_xyplot_2.png copying images... [ 18%] _static/benchmark_sum.png copying images... [ 21%] _static/graphics_lattice_wireframe_2.png copying images... [ 25%] _static/graphics_ggplot2smoothbycyl.png copying images... [ 28%] _static/rpy2_logo.png copying images... 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The HTML pages are in _build/html. make: Leaving directory `/usr/src/RPM/BUILD/python-module-rpy2-2.7.8/doc' + install -d /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2 + cp -fR doc/_build/pickle /usr/src/tmp/python-module-rpy2-buildroot/usr/lib64/python2.7/site-packages/rpy2/ + install -d /usr/src/tmp/python-module-rpy2-buildroot/etc/profile.d + cat + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/python-module-rpy2-buildroot (auto) mode of './usr/lib64/python3/site-packages/rpy2/rinterface/_rinterface.cpython-35m.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/python3/site-packages/rpy2/rinterface/_rpy_device.cpython-35m.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/python2.7/site-packages/rpy2/rinterface/_rinterface.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/python2.7/site-packages/rpy2/rinterface/_rpy_device.so' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/python-module-rpy2-buildroot (binconfig,pkgconfig,libtool,desktop) Compressing files in /usr/src/tmp/python-module-rpy2-buildroot (auto) Adjusting library links in /usr/src/tmp/python-module-rpy2-buildroot ./usr/lib64: ./usr/lib64/python3/site-packages/rpy2/robjects/lib: ./usr/lib64/python2.7/site-packages/rpy2/pickle/_modules/rpy2/robjects/lib: ./usr/lib64/python2.7/site-packages/rpy2/robjects/lib: Verifying ELF objects in /usr/src/tmp/python-module-rpy2-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) verify-elf: WARNING: ./usr/lib64/python3/site-packages/rpy2/rinterface/_rinterface.cpython-35m.so: RPATH contains several entries: /usr/local/lib64:/usr/lib64/R/lib verify-elf: ERROR: ./usr/lib64/python3/site-packages/rpy2/rinterface/_rinterface.cpython-35m.so: RPATH contains illegal absolute entry "/usr/local/lib64": /usr/local/lib64:/usr/lib64/R/lib verify-elf: WARNING: ./usr/lib64/python3/site-packages/rpy2/rinterface/_rpy_device.cpython-35m.so: RPATH contains several entries: /usr/local/lib64:/usr/lib64/R/lib verify-elf: ERROR: ./usr/lib64/python3/site-packages/rpy2/rinterface/_rpy_device.cpython-35m.so: RPATH contains illegal absolute entry "/usr/local/lib64": /usr/local/lib64:/usr/lib64/R/lib verify-elf: WARNING: ./usr/lib64/python2.7/site-packages/rpy2/rinterface/_rinterface.so: RPATH contains several entries: /usr/local/lib64:/usr/lib64/R/lib verify-elf: ERROR: ./usr/lib64/python2.7/site-packages/rpy2/rinterface/_rinterface.so: RPATH contains illegal absolute entry "/usr/local/lib64": /usr/local/lib64:/usr/lib64/R/lib verify-elf: WARNING: ./usr/lib64/python2.7/site-packages/rpy2/rinterface/_rpy_device.so: RPATH contains several entries: /usr/local/lib64:/usr/lib64/R/lib verify-elf: ERROR: ./usr/lib64/python2.7/site-packages/rpy2/rinterface/_rpy_device.so: RPATH contains illegal absolute entry "/usr/local/lib64": /usr/local/lib64:/usr/lib64/R/lib error: Bad exit status from /usr/src/tmp/rpm-tmp.45887 (%install) RPM build errors: Bad exit status from /usr/src/tmp/rpm-tmp.45887 (%install) Command exited with non-zero status 1 20.69user 1.17system 0:30.32elapsed 72%CPU (0avgtext+0avgdata 127468maxresident)k 0inputs+0outputs (0major+414549minor)pagefaults 0swaps hsh-rebuild: rebuild of `python-module-rpy2-2.7.8-alt1.1.src.rpm' failed. Command exited with non-zero status 1 36.63user 4.03system 0:54.03elapsed 75%CPU (0avgtext+0avgdata 127468maxresident)k 77752inputs+0outputs (0major+781507minor)pagefaults 0swaps