<86>Aug 8 01:09:15 userdel[2090456]: delete user 'rooter' <86>Aug 8 01:09:15 userdel[2090456]: removed group 'rooter' owned by 'rooter' <86>Aug 8 01:09:15 userdel[2090456]: removed shadow group 'rooter' owned by 'rooter' <86>Aug 8 01:09:15 groupadd[2090478]: group added to /etc/group: name=rooter, GID=1814 <86>Aug 8 01:09:15 groupadd[2090478]: group added to /etc/gshadow: name=rooter <86>Aug 8 01:09:15 groupadd[2090478]: new group: name=rooter, GID=1814 <86>Aug 8 01:09:15 useradd[2090496]: new user: name=rooter, UID=1814, GID=1814, home=/root, shell=/bin/bash, from=none <86>Aug 8 01:09:15 userdel[2090518]: delete user 'builder' <86>Aug 8 01:09:15 userdel[2090518]: removed group 'builder' owned by 'builder' <86>Aug 8 01:09:15 userdel[2090518]: removed shadow group 'builder' owned by 'builder' <86>Aug 8 01:09:15 groupadd[2090534]: group added to /etc/group: name=builder, GID=1815 <86>Aug 8 01:09:15 groupadd[2090534]: group added to /etc/gshadow: name=builder <86>Aug 8 01:09:15 groupadd[2090534]: new group: name=builder, GID=1815 <86>Aug 8 01:09:15 useradd[2090544]: new user: name=builder, UID=1815, GID=1815, home=/usr/src, shell=/bin/bash, from=none warning: user user does not exist - using root warning: group user does not exist - using root warning: user user does not exist - using root warning: group user does not exist - using root warning: user user does not exist - using root warning: group user does not exist - using root warning: user user does not exist - using root warning: group user does not exist - using root <13>Aug 8 01:09:18 rpmi: xorg-proto-devel-2022.1-alt1 sisyphus+299488.100.1.1 1651731532 installed <13>Aug 8 01:09:18 rpmi: libglvnd-7:1.6.0-alt2 sisyphus+321612.100.1.1 1684749007 installed <13>Aug 8 01:09:18 rpmi: libpng16-1.6.40-alt1 sisyphus+323732.100.1.1 1687771851 installed <13>Aug 8 01:09:18 rpmi: libexpat-2.5.0-alt1 sisyphus+309227.100.1.1 1667075764 installed <13>Aug 8 01:09:18 rpmi: libjpeg-2:2.1.2-alt1.2 sisyphus+300827.100.2.1 1653916633 installed <13>Aug 8 01:09:18 rpmi: libwayland-server-1.22.0-alt1.1 sisyphus+318010.100.1.1 1680606299 installed <13>Aug 8 01:09:18 rpmi: libicu73-1:7.3.2-alt1 sisyphus+323036.100.1.1 1686763352 installed <13>Aug 8 01:09:18 rpmi: libgraphite2-1.3.14-alt2.1 sisyphus+279571.100.1.2 1626605111 installed <13>Aug 8 01:09:18 rpmi: zlib-devel-1.2.13-alt1 sisyphus+309409.200.2.1 1667402043 installed <13>Aug 8 01:09:18 rpmi: libXau-1.0.11-alt1 sisyphus+311428.100.1.1 1670577439 installed <13>Aug 8 01:09:18 rpmi: xml-utils-1:2.10.4-alt1 sisyphus+311250.4140.175.1 1685628991 installed <13>Aug 8 01:09:18 rpmi: rpm-build-gir-0.7.3-alt3.1 sisyphus+319393.100.1.1 1682538783 installed <13>Aug 8 01:09:18 rpmi: libXau-devel-1.0.11-alt1 sisyphus+311428.100.1.1 1670577439 installed <13>Aug 8 01:09:18 rpmi: libpng-devel-1.6.40-alt1 sisyphus+323732.100.1.1 1687771851 installed <13>Aug 8 01:09:18 rpmi: libgraphite2-devel-1.3.14-alt2.1 sisyphus+279571.100.1.2 1626605111 installed <13>Aug 8 01:09:18 rpmi: icu-utils-1:7.3.2-alt1 sisyphus+323036.100.1.1 1686763352 installed <13>Aug 8 01:09:19 rpmi: libicu-devel-1:7.3.2-alt1 sisyphus+323036.100.1.1 1686763352 installed <13>Aug 8 01:09:19 rpmi: libGLES-7:1.6.0-alt2 sisyphus+321612.100.1.1 1684749007 installed <13>Aug 8 01:09:19 rpmi: libOpenGL-7:1.6.0-alt2 sisyphus+321612.100.1.1 1684749007 installed <13>Aug 8 01:09:19 rpmi: libncurses-6.3.20220618-alt1 sisyphus+302449.100.1.1 1655835246 installed <13>Aug 8 01:09:19 rpmi: libtinfo-devel-6.3.20220618-alt1 sisyphus+302449.100.1.1 1655835246 installed <13>Aug 8 01:09:19 rpmi: libncurses-devel-6.3.20220618-alt1 sisyphus+302449.100.1.1 1655835246 installed <13>Aug 8 01:09:19 rpmi: libxshmfence-1.3.2-alt1 sisyphus+311428.400.1.1 1670577525 installed <13>Aug 8 01:09:19 rpmi: libwayland-client-1.22.0-alt1.1 sisyphus+318010.100.1.1 1680606299 installed <13>Aug 8 01:09:19 rpmi: libpciaccess-1:0.17-alt1 sisyphus+308663.300.1.1 1666168260 installed <13>Aug 8 01:09:19 rpmi: libdrm-1:2.4.115-alt2 sisyphus+326300.100.1.1 1690981136 installed <13>Aug 8 01:09:19 rpmi: gcc-c++-common-1.4.27-alt1 sisyphus+278099.1300.1.1 1626028636 installed <13>Aug 8 01:09:19 rpmi: libstdc++13-devel-13.2.1-alt1 sisyphus+325923.100.1.1 1690626070 installed <13>Aug 8 01:09:19 rpmi: gcc13-c++-13.2.1-alt1 sisyphus+325923.100.1.1 1690626070 installed <13>Aug 8 01:09:19 rpmi: libpixman-3:0.42.2-alt1 sisyphus+309549.100.1.1 1667649219 installed <13>Aug 8 01:09:19 rpmi: libbrotlicommon-1.0.9-alt2 sisyphus+278430.100.1.2 1626213212 installed <13>Aug 8 01:09:19 rpmi: libbrotlidec-1.0.9-alt2 sisyphus+278430.100.1.2 1626213212 installed <13>Aug 8 01:09:20 rpmi: libharfbuzz-8.1.1-alt1 sisyphus+326343.100.1.1 1691060130 installed <13>Aug 8 01:09:20 rpmi: libfreetype-2.13.1-alt1 sisyphus+324353.100.1.1 1688638057 installed <13>Aug 8 01:09:20 rpmi: libfontconfig1-2.14.2-alt7 sisyphus+319291.100.1.1 1682426296 installed <13>Aug 8 01:09:20 rpmi: fontconfig-2.14.2-alt7 sisyphus+319291.100.1.1 1682426296 installed Updating fonts cache: <29>Aug 8 01:09:21 fontconfig: Updating fonts cache: succeeded [ DONE ] <13>Aug 8 01:09:21 rpmi: libharfbuzz-icu-8.1.1-alt1 sisyphus+326343.100.1.1 1691060130 installed <13>Aug 8 01:09:21 rpmi: libharfbuzz-gobject-8.1.1-alt1 sisyphus+326343.100.1.1 1691060130 installed <13>Aug 8 01:09:21 rpmi: libX11-locales-3:1.8.6-alt1 sisyphus+323114.100.1.1 1686850054 installed <13>Aug 8 01:09:21 rpmi: libXdmcp-1.1.4-alt1 sisyphus+311188.1000.1.1 1670233857 installed <13>Aug 8 01:09:21 rpmi: libxcb-1.15-alt1 sisyphus+299436.300.1.1 1651655472 installed <13>Aug 8 01:09:21 rpmi: libX11-3:1.8.6-alt1 sisyphus+323114.100.1.1 1686850054 installed <13>Aug 8 01:09:21 rpmi: libXext-1.3.5-alt1 sisyphus+309285.100.1.1 1667212412 installed <13>Aug 8 01:09:21 rpmi: libXrender-0.9.11-alt1 sisyphus+308841.100.1.1 1666436130 installed <13>Aug 8 01:09:21 rpmi: libXfixes-6.0.0-alt1 sisyphus+284644.300.1.1 1630910331 installed <13>Aug 8 01:09:21 rpmi: libXcursor-1.2.1-alt1 sisyphus+297765.200.1.1 1649053926 installed <13>Aug 8 01:09:21 rpmi: libcairo-1:1.17.8-alt1 sisyphus+324101.100.2.1 1690287710 installed <13>Aug 8 01:09:21 rpmi: libXft-2.3.7-alt1 sisyphus+310164.100.1.1 1668680608 installed <13>Aug 8 01:09:21 rpmi: libXinerama-1.1.5-alt1 sisyphus+309287.100.1.1 1667213208 installed <13>Aug 8 01:09:22 rpmi: libxcb-devel-1.15-alt1 sisyphus+299436.300.1.1 1651655472 installed <13>Aug 8 01:09:22 rpmi: libX11-devel-3:1.8.6-alt1 sisyphus+323114.100.1.1 1686850054 installed <13>Aug 8 01:09:22 rpmi: libXrender-devel-0.9.11-alt1 sisyphus+308841.100.1.1 1666436130 installed <13>Aug 8 01:09:22 rpmi: libXext-devel-1.3.5-alt1 sisyphus+309285.100.1.1 1667212412 installed <13>Aug 8 01:09:22 rpmi: libharfbuzz-cairo-8.1.1-alt1 sisyphus+326343.100.1.1 1691060130 installed <13>Aug 8 01:09:22 rpmi: libXxf86vm-1.1.5-alt1 sisyphus+308663.1400.1.1 1666168523 installed <13>Aug 8 01:09:22 rpmi: libGLX-mesa-4:23.1.5-alt1 sisyphus+326332.100.1.1 1691047473 installed <13>Aug 8 01:09:22 rpmi: libGLX-7:1.6.0-alt2 sisyphus+321612.100.1.1 1684749007 installed <13>Aug 8 01:09:22 rpmi: libGL-7:1.6.0-alt2 sisyphus+321612.100.1.1 1684749007 installed <13>Aug 8 01:09:22 rpmi: libGLU-4:9.0.1-alt1 sisyphus+278350.100.1.2 1626174382 installed <13>Aug 8 01:09:22 rpmi: libfltk13-1.3.8-alt1 sisyphus+301656.100.1.1 1654794775 installed <13>Aug 8 01:09:22 rpmi: libgbm-4:23.1.5-alt1 sisyphus+326332.100.1.1 1691047473 installed <13>Aug 8 01:09:22 rpmi: libEGL-mesa-4:23.1.5-alt1 sisyphus+326332.100.1.1 1691047473 installed <13>Aug 8 01:09:22 rpmi: libEGL-7:1.6.0-alt2 sisyphus+321612.100.1.1 1684749007 installed <13>Aug 8 01:09:22 rpmi: libglvnd-devel-7:1.6.0-alt2 sisyphus+321612.100.1.1 1684749007 installed <13>Aug 8 01:09:22 rpmi: libGLU-devel-4:9.0.1-alt1 sisyphus+278350.100.1.2 1626174382 installed <13>Aug 8 01:09:22 rpmi: libmpdec3-2.5.1-alt3 sisyphus+314490.500.5.1 1675432004 installed <13>Aug 8 01:09:22 rpmi: libgdbm-1.8.3-alt10 sisyphus+278100.1600.1.1 1626058413 installed <13>Aug 8 01:09:22 rpmi: libb2-0.98.1-alt1_1 sisyphus+291614.100.1.1 1638962877 installed <13>Aug 8 01:09:22 rpmi: libp11-kit-1:0.24.1-alt2 sisyphus+324666.100.1.1 1689083439 installed <13>Aug 8 01:09:22 rpmi: libtasn1-4.19.0-alt2 sisyphus+323514.100.1.1 1687445894 installed <13>Aug 8 01:09:22 rpmi: rpm-macros-alternatives-0.5.2-alt2 sisyphus+315270.200.2.1 1676457367 installed <13>Aug 8 01:09:22 rpmi: alternatives-0.5.2-alt2 sisyphus+315270.200.2.1 1676457367 installed <13>Aug 8 01:09:22 rpmi: ca-certificates-2023.07.31-alt1 sisyphus+326137.200.1.1 1690809798 installed <13>Aug 8 01:09:22 rpmi: ca-trust-0.1.4-alt1 sisyphus+308690.100.1.1 1666182992 installed <13>Aug 8 01:09:22 rpmi: p11-kit-trust-1:0.24.1-alt2 sisyphus+324666.100.1.1 1689083439 installed <13>Aug 8 01:09:22 rpmi: libcrypto3-3.1.2-alt1 sisyphus+326244.100.1.1 1690906741 installed <13>Aug 8 01:09:22 rpmi: libssl3-3.1.2-alt1 sisyphus+326244.100.1.1 1690906741 installed <13>Aug 8 01:09:22 rpmi: python3-3.11.4-alt2 sisyphus+324359.500.4.1 1689257961 installed <13>Aug 8 01:09:23 rpmi: python3-base-3.11.4-alt2 sisyphus+324359.500.4.1 1689257961 installed <13>Aug 8 01:09:23 rpmi: glib2-devel-2.76.4-alt1 sisyphus+324380.100.1.1 1688669907 installed <13>Aug 8 01:09:23 rpmi: libcairo-devel-1:1.17.8-alt1 sisyphus+324101.100.2.1 1690287710 installed <13>Aug 8 01:09:23 rpmi: fontconfig-devel-2.14.2-alt7 sisyphus+319291.100.1.1 1682426296 installed <13>Aug 8 01:09:23 rpmi: libfreetype-devel-2.13.1-alt1 sisyphus+324353.100.1.1 1688638057 installed <13>Aug 8 01:09:23 rpmi: libharfbuzz-devel-8.1.1-alt1 sisyphus+326343.100.1.1 1691060130 installed <13>Aug 8 01:09:23 rpmi: libpython3-3.11.4-alt2 sisyphus+324359.500.4.1 1689257961 installed <13>Aug 8 01:09:23 rpmi: tests-for-installed-python3-pkgs-0.1.22-alt1 sisyphus+319076.100.3.1 1682536051 installed <13>Aug 8 01:09:23 rpmi: rpm-build-python3-0.1.22-alt1 sisyphus+319076.100.3.1 1682536051 installed <13>Aug 8 01:09:24 rpmi: python3-dev-3.11.4-alt2 sisyphus+324359.500.4.1 1689257961 installed <13>Aug 8 01:09:24 rpmi: libXft-devel-2.3.7-alt1 sisyphus+310164.100.1.1 1668680608 installed <13>Aug 8 01:09:24 rpmi: libfltk-devel-1.3.8-alt1 sisyphus+301656.100.1.1 1654794775 installed <13>Aug 8 01:09:24 rpmi: libXcursor-devel-1.2.1-alt1 sisyphus+297765.200.1.1 1649053926 installed <13>Aug 8 01:09:24 rpmi: libXfixes-devel-6.0.0-alt1 sisyphus+284644.300.1.1 1630910331 installed <13>Aug 8 01:09:24 rpmi: libXinerama-devel-1.1.5-alt1 sisyphus+309287.100.1.1 1667213208 installed <13>Aug 8 01:09:24 rpmi: gcc-c++-13-alt1 sisyphus+323337.300.1.1 1687267966 installed <13>Aug 8 01:09:24 rpmi: libjpeg-devel-2:2.1.2-alt1.2 sisyphus+300827.100.2.1 1653916633 installed Building target platforms: x86_64 Building for target x86_64 Wrote: /usr/src/in/nosrpm/seaview-5.0.5-alt1.nosrc.rpm (w1.gzdio) Installing seaview-5.0.5-alt1.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.15027 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf seaview + echo 'Source #0 (seaview-5.0.5.tar.gz):' Source #0 (seaview-5.0.5.tar.gz): + /bin/gzip -dc /usr/src/RPM/SOURCES/seaview-5.0.5.tar.gz + /bin/tar -xf - + cd seaview + /bin/chmod -c -Rf u+rwX,go-w . + chmod -x addbootstrap.cxx align.cxx comlines.cxx concatenate.cxx custom.cxx least_squares_brl.cxx load_seq.cxx nexus.cxx pdf_or_ps.cxx pseudoterminal.cxx racnuc_fetch.cxx regions.cxx resource.cxx seaview.cxx statistics.cxx svg.cxx tbe.cxx threads.cxx treedraw.cxx treerecs_draw.cxx trees.cxx unrooted.cxx use_mase_files.cxx viewasprots.cxx win32_extras.cxx xfmatpt.cxx + chmod -x csrc/bionj.c csrc/dnapars.c csrc/lwl.c csrc/md5.c csrc/misc_acnuc.c csrc/parser.c csrc/parser.h csrc/phylip.c csrc/phylip.h csrc/phyml_util.c csrc/phyml_util.h csrc/protpars.c csrc/raa_acnuc.c csrc/raa_acnuc.h csrc/seq.c csrc/seq.h csrc/zsockr.c + sed -i 's|^\(CFLAGS.*\)|\1 -g -DFL_LIBRARY|' Makefile + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.15027 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + make -j16 make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF resource.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF concatenate.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF comlines.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF viewasprots.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF racnuc_fetch.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF load_seq.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF pseudoterminal.cxx pseudoterminal.cxx: In function 'int run_external_prog_in_pseudoterm(char*, const char*, const char*)': pseudoterminal.cxx:342:24: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 342 | freopen( (dialogfname ? dialogfname : slavename), "r", stdin); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pseudoterminal.cxx:343:24: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 343 | freopen(slavename, "a", stderr); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF pdf_or_ps.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF threads.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF custom.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF statistics.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF regions.cxx regions.cxx: In function 'int create_gblocks_mask(SEA_VIEW*, region*, int, int, int, int, int)': regions.cxx:313:9: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 313 | system(cmd); | ~~~~~~^~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/parser.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF least_squares_brl.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF align.cxx align.cxx: In function 'void replace_stars(char*)': align.cxx:1302:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1302 | fread(all, 1, l, in); | ~~~~~^~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF nexus.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF tbe.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF xfmatpt.cxx In function 'int really_close(FD_matpt*)', inlined from 'void exit_button_proc(Fl_Widget*, FD_matpt*)' at xfmatpt.cxx:898:18: xfmatpt.cxx:889:5: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq1' with nonzero offset 1 [-Wfree-nonheap-object] 889 | free(matpt->seq1 + 1); | ~~~~^~~~~~~~~~~~~~~~~ xfmatpt.cxx:890:5: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq2' with nonzero offset 1 [-Wfree-nonheap-object] 890 | free(matpt->seq2 + 1); | ~~~~^~~~~~~~~~~~~~~~~ xfmatpt.cxx: In function 'void show_dot_plot(char*, char*, char*, char*, int, int, int, void*)': xfmatpt.cxx:124:21: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq1' with nonzero offset 1 [-Wfree-nonheap-object] 124 | free(matpt->seq1+1); | ~~~~^~~~~~~~~~~~~~~ xfmatpt.cxx:125:21: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq2' with nonzero offset 1 [-Wfree-nonheap-object] 125 | free(matpt->seq2+1); | ~~~~^~~~~~~~~~~~~~~ xfmatpt.cxx: In function 'int really_close(FD_matpt*)': xfmatpt.cxx:889:5: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq1' with nonzero offset 1 [-Wfree-nonheap-object] 889 | free(matpt->seq1 + 1); | ~~~~^~~~~~~~~~~~~~~~~ xfmatpt.cxx:890:5: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq2' with nonzero offset 1 [-Wfree-nonheap-object] 890 | free(matpt->seq2 + 1); | ~~~~^~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/zsockr.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/md5.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF svg.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/misc_acnuc.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF addbootstrap.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/bionj.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF unrooted.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF use_mase_files.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/phyml_util.c csrc/phyml_util.c: In function 'Warn_And_Exit': csrc/phyml_util.c:47:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 47 | fscanf(stdin,"%c",&c); | ^~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/dnapars.c csrc/dnapars.c: In function 'dnapars': csrc/dnapars.c:1685:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1685 | fread(tree, L, 1, outtree); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/lwl.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/protpars.c csrc/protpars.c: In function 'protpars': csrc/protpars.c:2097:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 2097 | fread(tree, L, 1, outtree); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF treerecs_draw.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/raa_acnuc.c In function 'fill_gfrag_buf', inlined from 'raa_gfrag' at csrc/raa_acnuc.c:599:8: csrc/raa_acnuc.c:581:39: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 581 | raa_current_db->gfrag_data.buffer[lu] = 0; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ In file included from csrc/raa_acnuc.c:1: csrc/raa_acnuc.h: In function 'raa_gfrag': csrc/raa_acnuc.h:34:14: note: at offset 10001 into destination object 'buffer' of size 10001 34 | char buffer[RAA_GFRAG_BSIZE + 1]; | ^~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF trees.cxx trees.cxx: In function 'void run_phyml_callback(Fl_Widget*, void*)': trees.cxx:1301:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1301 | fread(bootstrap_trees, l, 1, in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ trees.cxx: In function 'void command_line_phylogeny(int, char**)': trees.cxx:2794:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 2794 | fread(utree, s, 1, in); | ~~~~~^~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/phylip.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF treedraw.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF seaview.cxx seaview.cxx: In function 'void delete_tmp_filename(const char*)': seaview.cxx:636:9: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 636 | system(fname); | ~~~~~~^~~~~~~ seaview.cxx: In function 'char* run_and_close_native_file_chooser(Fl_Native_File_Chooser*, int)': seaview.cxx:2899:45: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 2899 | if( *last_visited_directory )chdir(last_visited_directory); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF FL/Fl_SVG_Image.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/seq.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -o seaview seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o tbe.o treerecs_draw.o Fl_SVG_Image.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o `fltk-config --use-images --ldflags` -ldl -lpthread -lz -Wl,-z,muldefs make: Leaving directory '/usr/src/RPM/BUILD/seaview' + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.34827 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/seaview-buildroot + : + /bin/rm -rf -- /usr/src/tmp/seaview-buildroot + PATH=/usr/libexec/rpm-build:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games + cd seaview + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/seaview + mkdir -p /usr/src/tmp/seaview-buildroot/usr/bin + mkdir -p /usr/src/tmp/seaview-buildroot//usr/share/man/man1 + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/applications/ + install -m 755 seaview /usr/src/tmp/seaview-buildroot//usr/bin + install -m 644 seaview.html /usr/src/tmp/seaview-buildroot/usr/share/seaview/ + install -m 644 /usr/src/RPM/SOURCES/seaview.desktop /usr/src/tmp/seaview-buildroot/usr/share/applications/ + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/ + install -m 0644 -p seaview.xpm /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/seaview.xpm + install -m 644 seaview.1 /usr/src/tmp/seaview-buildroot//usr/share/man/man1 + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/seaview-buildroot (auto) Verifying and fixing files in /usr/src/tmp/seaview-buildroot (binconfig,pkgconfig,libtool,desktop,gnuconfig) /usr/share/applications/seaview.desktop: performed minor cleanup: 6c6 < Icon=seaview.xpm --- > Icon=seaview Checking contents of files in /usr/src/tmp/seaview-buildroot/ (default) Compressing files in /usr/src/tmp/seaview-buildroot (auto) 056-debuginfo.brp: WARNING: debuginfo without debug sources. Verifying ELF objects in /usr/src/tmp/seaview-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Hardlinking identical .pyc and .opt-?.pyc files Executing(%check): /bin/sh -e /usr/src/tmp/rpm-tmp.34827 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + exit 0 Processing files: seaview-5.0.5-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.34827 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + DOCDIR=/usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + export DOCDIR + rm -rf /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + /bin/mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + cp -prL seaview.1.xml example.nxs /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + chmod -R go-w /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + chmod -R a+rX /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.NhV9f2 find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.jbxmGa find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) Requires: /lib64/ld-linux-x86-64.so.2, libc.so.6(GLIBC_2.11)(64bit), libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.15)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.34)(64bit), libc.so.6(GLIBC_2.4)(64bit), libc.so.6(GLIBC_2.7)(64bit), libfltk.so.2()(64bit) >= set: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, libfltk_images.so.2()(64bit) >= set:jfWg1JaebIlCT0Tk9Z0EM7, libgcc_s.so.1(GCC_3.0)(64bit), libm.so.6(GLIBC_2.2.5)(64bit), libm.so.6(GLIBC_2.29)(64bit), libstdc++.so.6(CXXABI_1.3)(64bit), libstdc++.so.6(CXXABI_1.3.8)(64bit), libstdc++.so.6(CXXABI_1.3.9)(64bit), libstdc++.so.6(GLIBCXX_3.4)(64bit), libstdc++.so.6(GLIBCXX_3.4.20)(64bit), libstdc++.so.6(GLIBCXX_3.4.21)(64bit), libstdc++.so.6(GLIBCXX_3.4.32)(64bit), libz.so.1()(64bit) >= set:khM4g6JBZuPIo4PSZj1, rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.26q1Nh Creating seaview-debuginfo package Processing files: seaview-debuginfo-5.0.5-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.9DLGpS find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.6b5ZJS find-requires: running scripts (debuginfo) Requires: seaview = 5.0.5-alt1, /usr/lib/debug/lib64/ld-linux-x86-64.so.2.debug, debug64(libc.so.6), debug64(libfltk.so.2), debug64(libfltk_images.so.2), debug64(libgcc_s.so.1), debug64(libm.so.6), debug64(libstdc++.so.6), debug64(libz.so.1) Adding to seaview-debuginfo a strict dependency on seaview Wrote: /usr/src/RPM/RPMS/x86_64/seaview-5.0.5-alt1.x86_64.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/x86_64/seaview-debuginfo-5.0.5-alt1.x86_64.rpm (w2.lzdio) 29.01user 2.47system 0:08.75elapsed 359%CPU (0avgtext+0avgdata 104952maxresident)k 0inputs+0outputs (0major+602317minor)pagefaults 0swaps 3.36user 1.58system 0:21.93elapsed 22%CPU (0avgtext+0avgdata 126056maxresident)k 1696inputs+0outputs (0major+231557minor)pagefaults 0swaps --- seaview-5.0.5-alt1.x86_64.rpm.repo 2021-12-13 03:56:04.000000000 +0000 +++ seaview-5.0.5-alt1.x86_64.rpm.hasher 2023-08-08 01:09:35.071679966 +0000 @@ -31,2 +31,3 @@ Requires: libstdc++.so.6(GLIBCXX_3.4.21)(64bit) +Requires: libstdc++.so.6(GLIBCXX_3.4.32)(64bit) Requires: libz.so.1()(64bit) >= set:khM4g6JBZuPIo4PSZj1 @@ -35,3 +36,3 @@ Provides: seaview = 5.0.5-alt1:sisyphus+291878.100.1.1 -File: /usr/bin/seaview 100755 root:root 6e8b963a2cb56beb38b9b43468b2909b +File: /usr/bin/seaview 100755 root:root 1e3e8e93c394bc070bad613785ce9ea6 File: /usr/share/applications/seaview.desktop 100644 root:root 8245612f5c1c5c0af83c390b3f0b74e2 @@ -44,2 +45,2 @@ File: /usr/share/seaview/seaview.html 100644 root:root 80a242b5972590cac2d1ebf90957b92b -RPMIdentity: f3000929bea531e682027557a2c02f8fb0bfdf64ca741cb8743fc349f9f9ec13a179376888b26c2ec9472249e7554a94026e3bdce4f390b5a4bebaa331c8762d +RPMIdentity: 99c909aa464c16fd6c815b2cfb90b01f156c59380a69c39e88aa7f3726bf9342ad16097fe361342f77b523ed0637fd05239b177ac0d2b86d099d3e24e5758a07 --- seaview-debuginfo-5.0.5-alt1.x86_64.rpm.repo 2021-12-13 03:56:05.000000000 +0000 +++ seaview-debuginfo-5.0.5-alt1.x86_64.rpm.hasher 2023-08-08 01:09:35.123680913 +0000 @@ -1,4 +1,4 @@ -/usr/lib/debug/.build-id/49 40755 root:root -/usr/lib/debug/.build-id/49/21e4ca72e2f0cd4b50babac4542199b2292f51 120777 root:root ../../../../bin/seaview -/usr/lib/debug/.build-id/49/21e4ca72e2f0cd4b50babac4542199b2292f51.debug 120777 root:root ../../usr/bin/seaview.debug +/usr/lib/debug/.build-id/8a 40755 root:root +/usr/lib/debug/.build-id/8a/b68142e84b91a6f62529f88cad0f1a9c3c2f02 120777 root:root ../../../../bin/seaview +/usr/lib/debug/.build-id/8a/b68142e84b91a6f62529f88cad0f1a9c3c2f02.debug 120777 root:root ../../usr/bin/seaview.debug /usr/lib/debug/usr/bin/seaview.debug 100644 root:root @@ -15,6 +15,6 @@ Provides: seaview-debuginfo = 5.0.5-alt1:sisyphus+291878.100.1.1 -File: /usr/lib/debug/.build-id/49 40755 root:root -File: /usr/lib/debug/.build-id/49/21e4ca72e2f0cd4b50babac4542199b2292f51 120777 root:root ../../../../bin/seaview -File: /usr/lib/debug/.build-id/49/21e4ca72e2f0cd4b50babac4542199b2292f51.debug 120777 root:root ../../usr/bin/seaview.debug -File: /usr/lib/debug/usr/bin/seaview.debug 100644 root:root aabc54eada52e0e4e8e35769972cd88e -RPMIdentity: a3ae30ecd33da92310e3a0d3788f6360b04692667d8c44e353643ce18017e702d9aa4213efe8309deaeb45e3197d61af51dc0d12747d19f69606b0d0dafa9ca4 +File: /usr/lib/debug/.build-id/8a 40755 root:root +File: /usr/lib/debug/.build-id/8a/b68142e84b91a6f62529f88cad0f1a9c3c2f02 120777 root:root ../../../../bin/seaview +File: /usr/lib/debug/.build-id/8a/b68142e84b91a6f62529f88cad0f1a9c3c2f02.debug 120777 root:root ../../usr/bin/seaview.debug +File: /usr/lib/debug/usr/bin/seaview.debug 100644 root:root 131b3a15da02bb1d5680c98bae9f5303 +RPMIdentity: 59405f477ac02d674804e02e1c3c0cd8c2ce3ec0bcac3b2094eabbc71a224ffaea9cb722b4a02f221f9e5f7934d1168b6e9d7008f36f41771ecbf2dd4d584f9f