<86>May 26 05:03:24 userdel[2379324]: delete user 'rooter' <86>May 26 05:03:24 userdel[2379324]: removed group 'rooter' owned by 'rooter' <86>May 26 05:03:24 userdel[2379324]: removed shadow group 'rooter' owned by 'rooter' <86>May 26 05:03:24 groupadd[2379332]: group added to /etc/group: name=rooter, GID=567 <86>May 26 05:03:24 groupadd[2379332]: group added to /etc/gshadow: name=rooter <86>May 26 05:03:24 groupadd[2379332]: new group: name=rooter, GID=567 <86>May 26 05:03:24 useradd[2379338]: new user: name=rooter, UID=567, GID=567, home=/root, shell=/bin/bash <86>May 26 05:03:24 userdel[2379349]: delete user 'builder' <86>May 26 05:03:24 userdel[2379349]: removed group 'builder' owned by 'builder' <86>May 26 05:03:24 userdel[2379349]: removed shadow group 'builder' owned by 'builder' <86>May 26 05:03:24 groupadd[2379360]: group added to /etc/group: name=builder, GID=568 <86>May 26 05:03:24 groupadd[2379360]: group added to /etc/gshadow: name=builder <86>May 26 05:03:24 groupadd[2379360]: new group: name=builder, GID=568 <86>May 26 05:03:24 useradd[2379369]: new user: name=builder, UID=568, GID=568, home=/usr/src, shell=/bin/bash <13>May 26 05:03:28 rpmi: xorg-proto-devel-2020.1-alt1 sisyphus+250406.100.1.1 1587554810 installed <13>May 26 05:03:28 rpmi: libglvnd-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859567 installed <13>May 26 05:03:28 rpmi: libexpat-2.2.4-alt1 1503305341 installed <13>May 26 05:03:28 rpmi: libpng16-1.6.37-alt1 sisyphus+236677.100.2.1 1566917982 installed <13>May 26 05:03:28 rpmi: libjpeg-2:2.0.2-alt1 sisyphus+226996.100.1.1 1554902884 installed <13>May 26 05:03:28 rpmi: libXau-1.0.9-alt1 sisyphus+223149.200.2.1 1551268156 installed <13>May 26 05:03:28 rpmi: libwayland-server-1.18.0-alt1 sisyphus+245906.100.1.1 1581492497 installed <13>May 26 05:03:29 rpmi: libicu66-1:6.6.1-alt1 sisyphus+247988.100.1.1 1584453984 installed <13>May 26 05:03:29 rpmi: libgraphite2-1.3.14-alt2 sisyphus+250009.100.1.1 1586943071 installed <13>May 26 05:03:29 rpmi: libgraphite2-devel-1.3.14-alt2 sisyphus+250009.100.1.1 1586943071 installed <13>May 26 05:03:30 rpmi: icu-utils-1:6.6.1-alt1 sisyphus+247988.100.1.1 1584453984 installed <13>May 26 05:03:30 rpmi: libicu-devel-1:6.6.1-alt1 sisyphus+247988.100.1.1 1584453984 installed <13>May 26 05:03:30 rpmi: libXau-devel-1.0.9-alt1 sisyphus+223149.200.2.1 1551268156 installed <13>May 26 05:03:30 rpmi: libOpenGL-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859567 installed <13>May 26 05:03:30 rpmi: libGLES-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859567 installed <13>May 26 05:03:30 rpmi: zlib-devel-1.2.11-alt1 sisyphus+221902.6000.4.1 1550600768 installed <13>May 26 05:03:30 rpmi: libtinfo-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686221 installed <13>May 26 05:03:30 rpmi: libncurses-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686221 installed <13>May 26 05:03:30 rpmi: libxshmfence-1.3-alt1 sisyphus+223149.1000.2.1 1551268594 installed <13>May 26 05:03:30 rpmi: libX11-locales-3:1.6.9-alt1 sisyphus+239210.100.1.1 1571056781 installed <13>May 26 05:03:30 rpmi: libXdmcp-1.1.3-alt1 sisyphus+225206.600.1.2 1552949347 installed <13>May 26 05:03:30 rpmi: libxcb-1.14-alt1 sisyphus+247358.200.1.3 1583854223 installed <13>May 26 05:03:30 rpmi: libX11-3:1.6.9-alt1 sisyphus+239210.100.1.1 1571056781 installed <13>May 26 05:03:30 rpmi: libXext-1.3.4-alt1 sisyphus+225206.700.1.2 1552949422 installed <13>May 26 05:03:30 rpmi: libXfixes-5.0.3-alt1 sisyphus+226736.100.2.2 1554614842 installed <13>May 26 05:03:30 rpmi: libXrender-0.9.8-alt1 1371312110 installed <13>May 26 05:03:30 rpmi: libXcursor-1.2.0-alt1 sisyphus+225206.400.1.2 1552949214 installed <13>May 26 05:03:30 rpmi: libXinerama-1.1.4-alt1 sisyphus+223149.300.2.1 1551268223 installed <13>May 26 05:03:30 rpmi: libXxf86vm-1.1.4-alt2 1527672159 installed <13>May 26 05:03:30 rpmi: libXdamage-1.1.5-alt1 sisyphus+225206.500.1.2 1552949282 installed <13>May 26 05:03:32 rpmi: libxcb-devel-1.14-alt1 sisyphus+247358.200.1.3 1583854223 installed <13>May 26 05:03:32 rpmi: libX11-devel-3:1.6.9-alt1 sisyphus+239210.100.1.1 1571056781 installed <13>May 26 05:03:32 rpmi: libXrender-devel-0.9.8-alt1 1371312110 installed <13>May 26 05:03:32 rpmi: libwayland-client-1.18.0-alt1 sisyphus+245906.100.1.1 1581492497 installed <13>May 26 05:03:32 rpmi: libpciaccess-1:0.16-alt1 sisyphus+234814.100.1.1 1563438297 installed <13>May 26 05:03:32 rpmi: libdrm-1:2.4.101-alt1 sisyphus+249280.100.1.1 1585921681 installed <13>May 26 05:03:32 rpmi: libGLX-mesa-4:20.0.7-alt1 sisyphus+251735.100.1.1 1589528295 installed <13>May 26 05:03:32 rpmi: libGLX-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859567 installed <13>May 26 05:03:32 rpmi: libGL-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859567 installed <13>May 26 05:03:32 rpmi: libGLU-4:9.0.1-alt1 sisyphus+248864.100.1.1 1585556464 installed <13>May 26 05:03:32 rpmi: libgbm-4:20.0.7-alt1 sisyphus+251735.100.1.1 1589528295 installed <13>May 26 05:03:32 rpmi: libEGL-mesa-4:20.0.7-alt1 sisyphus+251735.100.1.1 1589528295 installed <13>May 26 05:03:32 rpmi: libEGL-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859567 installed <13>May 26 05:03:32 rpmi: libglvnd-devel-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859567 installed <13>May 26 05:03:32 rpmi: libGL-devel-4:20.0.7-alt1 sisyphus+251735.100.1.1 1589528295 installed <13>May 26 05:03:32 rpmi: libGLU-devel-4:9.0.1-alt1 sisyphus+248864.100.1.1 1585556464 installed <13>May 26 05:03:32 rpmi: gcc-c++-common-1.4.24-alt3 sisyphus+243033.100.1.1 1576462403 installed <13>May 26 05:03:33 rpmi: libstdc++9-devel-9.3.1-alt1 sisyphus+251917.40.3.1 1589811833 installed <13>May 26 05:03:34 rpmi: gcc9-c++-9.3.1-alt1 sisyphus+251917.40.3.1 1589811833 installed <13>May 26 05:03:34 rpmi: libbrotlicommon-1.0.7-alt1 sisyphus+226738.100.2.1 1554554565 installed <13>May 26 05:03:34 rpmi: libbrotlidec-1.0.7-alt1 sisyphus+226738.100.2.1 1554554565 installed <13>May 26 05:03:34 rpmi: libharfbuzz-2.6.4-alt3 sisyphus+250007.100.2.1 1586945253 installed <13>May 26 05:03:34 rpmi: libfreetype-2.10.2-alt1 sisyphus+251736.100.1.1 1589531898 installed <13>May 26 05:03:34 rpmi: fontconfig-2.13.1-alt1 sisyphus+247349.100.1.2 1583841219 installed Updating fonts cache: <29>May 26 05:03:35 fontconfig: Updating fonts cache: succeeded [ DONE ] <13>May 26 05:03:35 rpmi: libXft-2.3.3-alt1 sisyphus+225206.1000.3.2 1552987714 installed <13>May 26 05:03:35 rpmi: libfltk13-1.3.5-alt0.1.rc1 sisyphus+221936.100.1.1 1550500967 installed <13>May 26 05:03:35 rpmi: libharfbuzz-icu-2.6.4-alt3 sisyphus+250007.100.2.1 1586945253 installed <13>May 26 05:03:35 rpmi: libharfbuzz-gobject-2.6.4-alt3 sisyphus+250007.100.2.1 1586945253 installed <13>May 26 05:03:35 rpmi: libgdbm-1.8.3-alt10 1454943313 installed <13>May 26 05:03:35 rpmi: xml-utils-1:2.9.10-alt3 sisyphus+245000.16400.79.1 1583229770 installed <13>May 26 05:03:35 rpmi: rpm-build-gir-0.7.3-alt3 sisyphus+242150.100.1.1 1575312005 installed <13>May 26 05:03:35 rpmi: libp11-kit-0.23.15-alt1 sisyphus+226408.100.2.1 1554288187 installed <13>May 26 05:03:35 rpmi: libtasn1-4.16.0-alt1 sisyphus+245480.100.1.1 1580825069 installed <13>May 26 05:03:35 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>May 26 05:03:35 rpmi: alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>May 26 05:03:35 rpmi: ca-certificates-2020.01.23-alt1 sisyphus+244791.300.2.1 1580285500 installed <13>May 26 05:03:35 rpmi: ca-trust-0.1.2-alt1 sisyphus+233348.100.1.1 1561653823 installed <13>May 26 05:03:35 rpmi: p11-kit-trust-0.23.15-alt1 sisyphus+226408.100.2.1 1554288187 installed <13>May 26 05:03:35 rpmi: libcrypto1.1-1.1.1g-alt1 sisyphus+249982.60.8.1 1587743567 installed <13>May 26 05:03:35 rpmi: libssl1.1-1.1.1g-alt1 sisyphus+249982.60.8.1 1587743567 installed <13>May 26 05:03:35 rpmi: libpython3-3.8.2-alt1 sisyphus+244999.100.3.1 1585218350 installed <13>May 26 05:03:35 rpmi: python3-3.8.2-alt1 sisyphus+244999.100.3.1 1585218350 installed <13>May 26 05:03:36 rpmi: python3-base-3.8.2-alt1 sisyphus+244999.100.3.1 1585218350 installed <13>May 26 05:03:37 rpmi: glib2-devel-2.64.2-alt1 sisyphus+249693.100.1.1 1586451300 installed <13>May 26 05:03:37 rpmi: libharfbuzz-devel-2.6.4-alt3 sisyphus+250007.100.2.1 1586945253 installed <13>May 26 05:03:37 rpmi: libfreetype-devel-2.10.2-alt1 sisyphus+251736.100.1.1 1589531898 installed <13>May 26 05:03:37 rpmi: fontconfig-devel-2.13.1-alt1 sisyphus+247349.100.1.2 1583841219 installed <13>May 26 05:03:37 rpmi: tests-for-installed-python3-pkgs-0.1.13.1-alt2 1535450458 installed <13>May 26 05:03:37 rpmi: rpm-build-python3-0.1.13.1-alt2 1535450458 installed <13>May 26 05:03:37 rpmi: python3-dev-3.8.2-alt1 sisyphus+244999.100.3.1 1585218350 installed <13>May 26 05:03:37 rpmi: libXft-devel-2.3.3-alt1 sisyphus+225206.1000.3.2 1552987714 installed <13>May 26 05:03:37 rpmi: libfltk-devel-1.3.5-alt0.1.rc1 sisyphus+221936.100.1.1 1550500967 installed <13>May 26 05:03:37 rpmi: gcc-c++-9-alt2 sisyphus+251923.100.2.2 1589881406 installed <13>May 26 05:03:37 rpmi: libXcursor-devel-1.2.0-alt1 sisyphus+225206.400.1.2 1552949214 installed <13>May 26 05:03:37 rpmi: libXext-devel-1.3.4-alt1 sisyphus+225206.700.1.2 1552949422 installed <13>May 26 05:03:37 rpmi: libXfixes-devel-5.0.3-alt1 sisyphus+226736.100.2.2 1554614842 installed <13>May 26 05:03:37 rpmi: libXinerama-devel-1.1.4-alt1 sisyphus+223149.300.2.1 1551268223 installed <13>May 26 05:03:37 rpmi: libpng-devel-1.6.37-alt1 sisyphus+236677.100.2.1 1566917982 installed <13>May 26 05:03:37 rpmi: libjpeg-devel-2:2.0.2-alt1 sisyphus+226996.100.1.1 1554902884 installed Building target platforms: x86_64 Building for target x86_64 Wrote: /usr/src/in/nosrpm/seaview-4.7-alt1.nosrc.rpm Installing seaview-4.7-alt1.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.96572 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf seaview + echo 'Source #0 (seaview_4.7.tar.gz):' Source #0 (seaview_4.7.tar.gz): + /bin/gzip -dc /usr/src/RPM/SOURCES/seaview_4.7.tar.gz + /bin/tar -xf - + cd seaview + /bin/chmod -c -Rf u+rwX,go-w . + chmod -x addbootstrap.cxx align.cxx comlines.cxx concatenate.cxx custom.cxx least_squares_brl.cxx load_seq.cxx nexus.cxx pdf_or_ps.cxx pseudoterminal.cxx racnuc_fetch.cxx regions.cxx resource.cxx seaview.cxx statistics.cxx svg.cxx tbe.cxx threads.cxx treedraw.cxx trees.cxx unrooted.cxx use_mase_files.cxx viewasprots.cxx win32_extras.cxx xfmatpt.cxx + chmod -x csrc/bionj.c csrc/dnapars.c csrc/lwl.c csrc/md5.c csrc/misc_acnuc.c csrc/parser.c csrc/parser.h csrc/phylip.c csrc/phylip.h csrc/phyml_util.c csrc/phyml_util.h csrc/protpars.c csrc/raa_acnuc.c csrc/raa_acnuc.h csrc/seq.c csrc/seq.h csrc/zsockr.c + sed -i 's|^\(CFLAGS.*\)|\1 -g -DFL_LIBRARY|' Makefile + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.16824 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + make -j8 make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF custom.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF resource.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF regions.cxx regions.cxx: In function 'int create_gblocks_mask(SEA_VIEW*, region*, int, int, int, int, int)': regions.cxx:305:9: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] 305 | system(cmd); | ~~~~~~^~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF viewasprots.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF racnuc_fetch.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF concatenate.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF comlines.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF nexus.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF statistics.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF load_seq.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF least_squares_brl.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF pseudoterminal.cxx pseudoterminal.cxx: In function 'int run_external_prog_in_pseudoterm(char*, const char*, const char*)': pseudoterminal.cxx:342:11: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)', declared with attribute warn_unused_result [-Wunused-result] 342 | freopen(dialogfname, "r", stdin); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ pseudoterminal.cxx:344:10: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)', declared with attribute warn_unused_result [-Wunused-result] 344 | freopen(slavename, "a", stderr); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF trees.cxx trees.cxx: In function 'void run_phyml_callback(Fl_Widget*, void*)': trees.cxx:1295:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] 1295 | fread(bootstrap_trees, l, 1, in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ trees.cxx: In function 'void command_line_phylogeny(int, char**)': trees.cxx:2788:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] 2788 | fread(utree, s, 1, in); | ~~~~~^~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF pdf_or_ps.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF xfmatpt.cxx xfmatpt.cxx:208:79: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 208 | Fl_Widget *postscript = cre_button(fin, curr_y, &width, but_height, fontsize, "Write "PDF_OR_PS); | ^ xfmatpt.cxx:873:14: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 873 | fl_message("Dot plot is now in file\n%s\nin "PDF_OR_PS" format", surface->outfname()); | ^ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF threads.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF svg.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -I. -Dunix -O3 -I. -Icsrc -DNO_PDF FL/Fl_Native_File_Chooser_FLTK.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF treedraw.cxx treedraw.cxx:325:6: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 325 | {"Save as "PDF_OR_PS"", 0, file_callback, NULL, 0}, | ^ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/parser.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF seaview.cxx seaview.cxx:3352:21: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 3352 | strcat(suggested, "."PDF_OR_PS_EXT); | ^ seaview.cxx:3462:17: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 3462 | pdf_form->label("Set "PDF_OR_PS" output options"); | ^ seaview.cxx:5051:6: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 5051 | {"Prepare "PDF_OR_PS"", 0, file_menu_callback, 0, 0}, | ^ seaview.cxx:5052:6: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 5052 | {""PDF_OR_PS" options...", 0, file_menu_callback, 0, FL_MENU_DIVIDER}, | ^ seaview.cxx: In function 'void delete_tmp_filename(const char*)': seaview.cxx:646:9: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] 646 | system(fname); | ~~~~~~^~~~~~~ seaview.cxx: In function 'char* run_and_close_native_file_chooser(Fl_Native_File_Chooser*, int)': seaview.cxx:2909:38: warning: ignoring return value of 'int chdir(const char*)', declared with attribute warn_unused_result [-Wunused-result] 2909 | if( *last_visited_directory )chdir(last_visited_directory); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:507, from seaview.h:5, from seaview.cxx:67: In function 'char* strncpy(char*, const char*, size_t)', inlined from 'void goto_callback(Fl_Widget*, void*)' at seaview.cxx:2738:9: /usr/include/bits/string_fortified.h:106:34: warning: 'char* __builtin___strncpy_chk(char*, const char*, long unsigned int, long unsigned int)' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seaview.cxx: In function 'void goto_callback(Fl_Widget*, void*)': seaview.cxx:2736:12: note: length computed here 2736 | l = strlen(p); | ~~~~~~^~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/zsockr.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF align.cxx align.cxx: In function 'void replace_stars(char*)': align.cxx:1298:7: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] 1298 | fread(all, 1, l, in); | ~~~~~^~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/md5.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/misc_acnuc.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/dnapars.c csrc/dnapars.c: In function 'dnapars': csrc/dnapars.c:1685:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] 1685 | fread(tree, L, 1, outtree); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF tbe.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/raa_acnuc.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/bionj.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/phyml_util.c csrc/phyml_util.c: In function 'Warn_And_Exit': csrc/phyml_util.c:47:2: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] 47 | fscanf(stdin,"%c",&c); | ^~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF addbootstrap.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF use_mase_files.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF unrooted.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/lwl.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/protpars.c csrc/protpars.c: In function 'protpars': csrc/protpars.c:2097:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] 2097 | fread(tree, L, 1, outtree); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/phylip.c In file included from /usr/include/stdio.h:867, from csrc/phylip.c:32: In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'readlong' at csrc/phylip.c:467:5: /usr/include/bits/stdio2.h:263:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'initcategs' at csrc/phylip.c:603:5: /usr/include/bits/stdio2.h:263:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'initprobcat' at csrc/phylip.c:634:5: /usr/include/bits/stdio2.h:263:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'initfreqs' at csrc/phylip.c:1021:5: /usr/include/bits/stdio2.h:263:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'readlong' at csrc/phylip.c:467:5, inlined from 'initnumlines' at csrc/phylip.c:1126:20: /usr/include/bits/stdio2.h:263:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/seq.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -o seaview seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o tbe.o Fl_Native_File_Chooser_FLTK.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o `fltk-config --use-images --ldflags` -ldl -lpthread -lz make: Leaving directory '/usr/src/RPM/BUILD/seaview' + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.95315 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/seaview-buildroot + : + /bin/rm -rf -- /usr/src/tmp/seaview-buildroot + cd seaview + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/seaview + mkdir -p /usr/src/tmp/seaview-buildroot/usr/bin + mkdir -p /usr/src/tmp/seaview-buildroot//usr/share/man/man1 + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/applications/ + install -m 755 seaview /usr/src/tmp/seaview-buildroot//usr/bin + install -m 644 seaview.html /usr/src/tmp/seaview-buildroot/usr/share/seaview/ + install -m 644 /usr/src/RPM/SOURCES/seaview.desktop /usr/src/tmp/seaview-buildroot/usr/share/applications/ + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/ + install -m 0644 -p seaview.xpm /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/seaview.xpm + install -m 644 seaview.1 /usr/src/tmp/seaview-buildroot//usr/share/man/man1 + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/seaview-buildroot (auto) Verifying and fixing files in /usr/src/tmp/seaview-buildroot (binconfig,pkgconfig,libtool,desktop) /usr/share/applications/seaview.desktop: performed minor cleanup: 6c6 < Icon=seaview.xpm --- > Icon=seaview Checking contents of files in /usr/src/tmp/seaview-buildroot/ (default) Compressing files in /usr/src/tmp/seaview-buildroot (auto) Verifying ELF objects in /usr/src/tmp/seaview-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Hardlinking identical .pyc and .opt-?.pyc files Hardlinking identical .pyc and .pyo files Executing(%check): /bin/sh -e /usr/src/tmp/rpm-tmp.12853 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + exit 0 Processing files: seaview-4.7-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.54182 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + DOCDIR=/usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.7 + export DOCDIR + rm -rf /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.7 + /bin/mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.7 + cp -prL seaview.1.xml example.nxs /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.7 + chmod -R go-w /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.7 + chmod -R a+rX /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.7 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.aGepry find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.dc75Oz find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) Requires: /lib64/ld-linux-x86-64.so.2, libc.so.6(GLIBC_2.11)(64bit), libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.15)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.3)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.4)(64bit), libc.so.6(GLIBC_2.7)(64bit), libfltk.so.2()(64bit) >= set:ph4uYvFlFC7kvHxQmcha6cNe3eMnHRsSAiSOlBdUCtk7OQCTEJbqRmihKTelfp7lfPGMhJghHoGepTfBZpi0m0LUpqQYP0QFZmQ1nthzUHdMAtVEuApRcu9qsCvLQaOMNW74qjxzJsRBjFJtEb3UZbHKkUk15pIDi5Bzr1GfblRVt6M0hQ82GhJuqNw2adCIJoViL2svfIy4FsUqjfjh2eZG4LgaMiZ70nWJeuRnOYbZm3KY3faqt1tHqhJQBTrkvbcn7hZB9ubCrUPTDGn85GlTpb5VLben6JnDZq0W59MYQSlUkJ7rVMdgQgYyGesZh7KFWT4eK1pIM9BPqTYF9D4RPPvnt2Lr7TexVXqOqef0riG1gzHng2YcIa33IXZnZqElwNBJTHQsKkBrv2CoXjaWZypoDaNDJGZ7UXpiJMgKHVhXPG97QeKSNY6fLMgyZnZrcCNRWZ8jkKqAYtvuNdyzjQw2X0Pcs7MHR1vaaj1QO1Od3hlUmAvKEC791ZhIgyi81E0DTQf5yhor8r5Oh3KLecSzWjkjK1EYVWjZegFT7Nx3ZkqZ8GMgNVlnF7vRqn56yCEUVGAPOwitap4leFPGQc79MPoDOZwAZ48MRadQBZbzFYSR4dTAkndGwZdpm7PbC2, libfltk_images.so.2()(64bit) >= set:jfWg1JaebIlCT0Tk9Z0EM7, libgcc_s.so.1(GCC_3.0)(64bit), libm.so.6(GLIBC_2.2.5)(64bit), libm.so.6(GLIBC_2.29)(64bit), libpthread.so.0(GLIBC_2.2.5)(64bit), libstdc++.so.6(CXXABI_1.3)(64bit), libstdc++.so.6(CXXABI_1.3.8)(64bit), libstdc++.so.6(CXXABI_1.3.9)(64bit), libstdc++.so.6(GLIBCXX_3.4)(64bit), libz.so.1()(64bit) >= set:kic1428UZj1, rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.WfZb1x Creating seaview-debuginfo package Processing files: seaview-debuginfo-4.7-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.WfrF2y find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.sBXgaz find-requires: running scripts (debuginfo) Requires: seaview = 4.7-alt1, /usr/lib/debug/lib64/ld-linux-x86-64.so.2.debug, debug64(libc.so.6), debug64(libfltk.so.2), debug64(libfltk_images.so.2), debug64(libgcc_s.so.1), debug64(libm.so.6), debug64(libpthread.so.0), debug64(libstdc++.so.6), debug64(libz.so.1) Adding to seaview-debuginfo a strict dependency on seaview Wrote: /usr/src/RPM/RPMS/x86_64/seaview-4.7-alt1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/seaview-debuginfo-4.7-alt1.x86_64.rpm 53.52user 3.87system 0:37.81elapsed 151%CPU (0avgtext+0avgdata 89684maxresident)k 0inputs+0outputs (0major+652464minor)pagefaults 0swaps 68.08user 11.13system 1:01.68elapsed 128%CPU (0avgtext+0avgdata 109644maxresident)k 392inputs+0outputs (0major+1037299minor)pagefaults 0swaps --- seaview-4.7-alt1.x86_64.rpm.repo 2019-02-19 16:41:09.000000000 +0000 +++ seaview-4.7-alt1.x86_64.rpm.hasher 2020-05-26 05:04:22.248715463 +0000 @@ -18,3 +18,3 @@ Requires: libc.so.6(GLIBC_2.7)(64bit) -Requires: libfltk.so.2()(64bit) >= set:ph4uYvFlFC7kvHxQmcha6cNe3eMnHRsSAiSOlBdUCtk7OQCTEJbqRmihKTelfp7lfPGMhJghHoGepTfBZpi0m0LUpqQYP0QFZmQ1nthzUHdMAtVEuApRcu9qsCvLQaOMNW74qjxzJsRBjFJtEb3UZbHKkUk15pIDi5Bzr1GfblRVt6M0hQ82GhJuqNw2adCIJoViL2svfIy4FsUqjfjh2eZG4LgaMiZ70nWJeuRnOYbZm3KY3faqt1tHqhJQBTrkvbcn7hZB9ubCrUPTDGn85GlTpb5VLben6JnDZq0W59MYQSlUkJ7rVMdgQgYyGesZh7KFWT4eK1pIM9BPqTYF9D4RPP8tWiDjUtXUS9cvnjmPV1ojid0qsZ281u6mBx1StZzv5J2cKIZelqenGOJf1jIZ9kQZBOMelyfrlXfYZcAqxxsnPzSDljeEtsJzVduuxx4ZfYn6PUqZeN9andiZuZsbKhssy6ko7oCxX0uJeUjhpawmegKp8G2TyYP5RY89Mfox4Bg2g1eLFva4zMSgSaAz6svtoI7RDECs3gVPRDWtEQXzUM1viH7lxxyPHKifZqmXGMgQ45fnBsm6kGj9zEO9tmBCV81u6XkZnwIDgwHlqEbXTNkuXqyCriGH6lMZucHzV5j1 +Requires: libfltk.so.2()(64bit) >= set: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 Requires: rpmlib(SetVersions) @@ -23,2 +23,3 @@ Requires: libm.so.6(GLIBC_2.2.5)(64bit) +Requires: libm.so.6(GLIBC_2.29)(64bit) Requires: libpthread.so.0(GLIBC_2.2.5)(64bit)