<86>Feb 21 05:56:29 userdel[2096998]: delete user 'rooter' <86>Feb 21 05:56:29 userdel[2096998]: removed group 'rooter' owned by 'rooter' <86>Feb 21 05:56:29 userdel[2096998]: removed shadow group 'rooter' owned by 'rooter' <86>Feb 21 05:56:29 groupadd[2097014]: group added to /etc/group: name=rooter, GID=603 <86>Feb 21 05:56:29 groupadd[2097014]: group added to /etc/gshadow: name=rooter <86>Feb 21 05:56:29 groupadd[2097014]: new group: name=rooter, GID=603 <86>Feb 21 05:56:29 useradd[2097027]: new user: name=rooter, UID=603, GID=603, home=/root, shell=/bin/bash <86>Feb 21 05:56:29 userdel[2097045]: delete user 'builder' <86>Feb 21 05:56:29 userdel[2097045]: removed group 'builder' owned by 'builder' <86>Feb 21 05:56:29 userdel[2097045]: removed shadow group 'builder' owned by 'builder' <86>Feb 21 05:56:29 groupadd[2097061]: group added to /etc/group: name=builder, GID=604 <86>Feb 21 05:56:29 groupadd[2097061]: group added to /etc/gshadow: name=builder <86>Feb 21 05:56:29 groupadd[2097061]: new group: name=builder, GID=604 <86>Feb 21 05:56:29 useradd[2097074]: new user: name=builder, UID=604, GID=604, home=/usr/src, shell=/bin/bash warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found <13>Feb 21 05:56:33 rpmi: libidn2-2.3.0-alt1 sisyphus+240846.100.1.2 1573870464 installed <13>Feb 21 05:56:33 rpmi: libnl3-3.5.0-alt1 sisyphus+237716.100.1.1 1568781467 installed <13>Feb 21 05:56:33 rpmi: libibverbs-27.0-alt1 sisyphus+243030.200.2.1 1576485521 installed <13>Feb 21 05:56:33 rpmi: libquadmath0-9.2.1-alt3 sisyphus+245055.100.1.1 1580041305 installed <13>Feb 21 05:56:33 rpmi: libgfortran5-9.2.1-alt3 sisyphus+245055.100.1.1 1580041305 installed <13>Feb 21 05:56:33 rpmi: udev-rules-1:244.3-alt2 sisyphus+246535.200.2.1 1581950419 installed <13>Feb 21 05:56:33 rpmi: librdmacm-27.0-alt1 sisyphus+243030.200.2.1 1576485521 installed <13>Feb 21 05:56:33 rpmi: libnuma-2.0.11-alt1 1450022595 installed <13>Feb 21 05:56:33 rpmi: libibumad-27.0-alt1 sisyphus+243030.200.2.1 1576485521 installed <13>Feb 21 05:56:33 rpmi: libmnl-1.0.4-alt2 sisyphus+220683.100.1.1 1549335455 installed <13>Feb 21 05:56:33 rpmi: gcc-fortran-common-1.4.24-alt3 sisyphus+243033.100.1.1 1576462403 installed <13>Feb 21 05:56:33 rpmi: liblz4-1:1.9.2-alt1 sisyphus+238585.100.2.2 1570066861 installed <13>Feb 21 05:56:33 rpmi: libiptables-1.8.3-alt2 sisyphus+230708.100.1.1 1559139619 installed <13>Feb 21 05:56:33 rpmi: libdevmapper-1.02.169-alt1 sisyphus+246686.100.1.1 1582206061 installed <13>Feb 21 05:56:33 rpmi: msulogin-1.0-alt1 1366288481 installed <13>Feb 21 05:56:34 rpmi: mount-2.33.2-alt1 sisyphus+227076.100.1.1 1555076778 installed <13>Feb 21 05:56:34 rpmi: sysvinit-2.88-alt6 sisyphus+240403.100.2.1 1573520131 installed <13>Feb 21 05:56:34 rpmi: libnetlink-5.4.0-alt1 sisyphus+242773.100.1.1 1576106895 installed <13>Feb 21 05:56:34 rpmi: libibmad-27.0-alt1 sisyphus+243030.200.2.1 1576485521 installed <13>Feb 21 05:56:34 rpmi: libibnetdisc-27.0-alt1 sisyphus+243030.200.2.1 1576485521 installed <13>Feb 21 05:56:34 rpmi: libnuma-devel-2.0.11-alt1 1450022595 installed <13>Feb 21 05:56:34 rpmi: libquadmath9-devel-9.2.1-alt3 sisyphus+245055.100.1.1 1580041305 installed <13>Feb 21 05:56:34 rpmi: libgfortran9-devel-9.2.1-alt3 sisyphus+245055.100.1.1 1580041305 installed <13>Feb 21 05:56:35 rpmi: gcc9-fortran-9.2.1-alt3 sisyphus+245055.100.1.1 1580041305 installed <13>Feb 21 05:56:35 rpmi: gcc-fortran-9-alt1 sisyphus+239632.300.3.1 1571789214 installed <13>Feb 21 05:56:35 rpmi: libquadmath8-devel-8.3.1-alt7 sisyphus+239632.200.3.1 1571787695 installed <13>Feb 21 05:56:35 rpmi: libgfortran8-devel-8.3.1-alt7 sisyphus+239632.200.3.1 1571787695 installed <13>Feb 21 05:56:35 rpmi: libsz2-2.1-alt4 1300649105 installed <13>Feb 21 05:56:35 rpmi: zlib-devel-1.2.11-alt1 sisyphus+221902.6000.4.1 1550600768 installed <13>Feb 21 05:56:35 rpmi: tcsh-6.20.00-alt2 1503603377 installed <13>Feb 21 05:56:35 rpmi: rpm-macros-mpi-selector-1.0.3-alt3 1504498675 installed <13>Feb 21 05:56:35 rpmi: mpi-selector-1.0.3-alt3 1504498675 installed <13>Feb 21 05:56:35 rpmi: openmpi-2.0.1-alt8 sisyphus+229856.100.1.1 1558540100 installed <13>Feb 21 05:56:35 rpmi: libpnetcdf-1.8.1-alt2 sisyphus+233636.100.1.1 1562118021 installed <13>Feb 21 05:56:35 rpmi: libpci-3.6.3-alt1 sisyphus+245241.100.1.1 1580296578 installed <13>Feb 21 05:56:35 rpmi: pciids-20200214-alt1 sisyphus+246288.100.1.1 1581721548 installed <13>Feb 21 05:56:35 rpmi: pciutils-3.6.3-alt1 sisyphus+245241.100.1.1 1580296578 installed <13>Feb 21 05:56:35 rpmi: libexpat-2.2.4-alt1 1503305341 installed <13>Feb 21 05:56:35 rpmi: publicsuffix-list-dafsa-20200106-alt1 sisyphus+244007.100.1.1 1578588044 installed <13>Feb 21 05:56:35 rpmi: libpsl-0.21.0-alt2 sisyphus+237083.100.1.1 1567531663 installed <13>Feb 21 05:56:35 rpmi: libnghttp2-1.40.0-alt1 sisyphus+244416.100.1.1 1579241975 installed <13>Feb 21 05:56:35 rpmi: libverto-0.3.0-alt1_7 sisyphus+225932.100.1.1 1553994917 installed <13>Feb 21 05:56:35 rpmi: libkeyutils-1.6-alt2 sisyphus+226520.100.2.1 1554512088 installed <13>Feb 21 05:56:35 rpmi: libcom_err-1.44.6-alt1 sisyphus+224154.100.1.1 1552091653 installed <13>Feb 21 05:56:35 rpmi: libbrotlicommon-1.0.7-alt1 sisyphus+226738.100.2.1 1554554565 installed <13>Feb 21 05:56:35 rpmi: libbrotlidec-1.0.7-alt1 sisyphus+226738.100.2.1 1554554565 installed <13>Feb 21 05:56:35 rpmi: libatm-2.5.1-alt6 sisyphus+234093.100.1.1 1562575879 installed <13>Feb 21 05:56:35 rpmi: chrooted-0.3.9-alt1 1524554183 installed <13>Feb 21 05:56:35 rpmi: chrooted-resolv-0.3.1-alt2 1176155257 installed <13>Feb 21 05:56:35 rpmi: gcc-c++-common-1.4.24-alt3 sisyphus+243033.100.1.1 1576462403 installed <13>Feb 21 05:56:36 rpmi: libstdc++9-devel-9.2.1-alt3 sisyphus+245055.100.1.1 1580041305 installed <13>Feb 21 05:56:37 rpmi: gcc9-c++-9.2.1-alt3 sisyphus+245055.100.1.1 1580041305 installed <13>Feb 21 05:56:37 rpmi: gcc-c++-9-alt1 sisyphus+239632.300.3.1 1571789214 installed <13>Feb 21 05:56:37 rpmi: udev-hwdb-1:244.3-alt2 sisyphus+246535.200.2.1 1581950419 installed <13>Feb 21 05:56:37 rpmi: libseccomp-2.4.2-alt2 sisyphus+245295.100.1.1 1580406862 installed <13>Feb 21 05:56:37 rpmi: libpcre2-10.34-alt1 sisyphus+241619.100.1.1 1574686792 installed <13>Feb 21 05:56:37 rpmi: libjson-c4-0.13.1-alt1 sisyphus+226468.100.8.1 1554723265 installed <13>Feb 21 05:56:37 rpmi: libargon2-20190702-alt1 sisyphus+235300.100.1.1 1564606506 installed <13>Feb 21 05:56:37 rpmi: libgpg-error-1.36-alt1 sisyphus+225621.300.1.1 1553521088 installed <13>Feb 21 05:56:37 rpmi: libgcrypt20-1.8.5-alt3 sisyphus+239622.100.1.1 1571746563 installed <13>Feb 21 05:56:37 rpmi: libsystemd-1:244.3-alt2 sisyphus+246535.200.2.1 1581950419 installed <13>Feb 21 05:56:37 rpmi: hwclock-1:2.33.2-alt1 sisyphus+227076.100.1.1 1555076778 installed <13>Feb 21 05:56:37 rpmi: hashalot-0.3-alt1.qa1 1366323553 installed <13>Feb 21 05:56:37 rpmi: losetup-2.33.2-alt1 sisyphus+227076.100.1.1 1555076778 installed <13>Feb 21 05:56:37 rpmi: lsblk-2.33.2-alt1 sisyphus+227076.100.1.1 1555076778 installed <13>Feb 21 05:56:37 rpmi: libp11-kit-0.23.15-alt1 sisyphus+226408.100.2.1 1554288187 installed <13>Feb 21 05:56:37 rpmi: libtasn1-4.16.0-alt1 sisyphus+245480.100.1.1 1580825069 installed <13>Feb 21 05:56:37 rpmi: bc-1:1.07.1-alt1 sisyphus+221902.700.4.1 1550587848 installed <13>Feb 21 05:56:37 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Feb 21 05:56:37 rpmi: alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Feb 21 05:56:37 rpmi: libhdf5-8-mpi-1.8.13-alt4 sisyphus+223496.100.1.1 1551620824 installed <13>Feb 21 05:56:37 rpmi: ca-certificates-2020.01.23-alt1 sisyphus+244791.300.2.1 1580285500 installed <13>Feb 21 05:56:37 rpmi: ca-trust-0.1.2-alt1 sisyphus+233348.100.1.1 1561653823 installed <13>Feb 21 05:56:37 rpmi: p11-kit-trust-0.23.15-alt1 sisyphus+226408.100.2.1 1554288187 installed <13>Feb 21 05:56:38 rpmi: libcrypto1.1-1.1.1d-alt1.1 sisyphus+237931.100.2.1 1569235630 installed <13>Feb 21 05:56:38 rpmi: libkmod-26-alt1 sisyphus+226359.100.1.1 1554129988 installed <13>Feb 21 05:56:38 rpmi: libssl1.1-1.1.1d-alt1.1 sisyphus+237931.100.2.1 1569235630 installed <86>Feb 21 05:56:38 groupadd[2105840]: group added to /etc/group: name=_keytab, GID=499 <86>Feb 21 05:56:38 groupadd[2105840]: group added to /etc/gshadow: name=_keytab <86>Feb 21 05:56:38 groupadd[2105840]: new group: name=_keytab, GID=499 <13>Feb 21 05:56:38 rpmi: libkrb5-1.17.1-alt1 sisyphus+242784.100.1.1 1576137160 installed <13>Feb 21 05:56:38 rpmi: kmod-26-alt1 sisyphus+226359.100.1.1 1554129988 installed <86>Feb 21 05:56:38 groupadd[2105866]: group added to /etc/group: name=sasl, GID=498 <86>Feb 21 05:56:38 groupadd[2105866]: group added to /etc/gshadow: name=sasl <86>Feb 21 05:56:38 groupadd[2105866]: new group: name=sasl, GID=498 <13>Feb 21 05:56:38 rpmi: libsasl2-3-2.1.27-alt2 sisyphus+228101.100.1.1 1556139861 installed <13>Feb 21 05:56:38 rpmi: libldap-2.4.48-alt3 sisyphus+238816.100.1.1 1570449061 installed <13>Feb 21 05:56:38 rpmi: libcurl-7.68.0-alt1 sisyphus+244054.100.1.1 1578655310 installed <13>Feb 21 05:56:38 rpmi: libnetcdf11-mpi-4.4.1.1-alt2 sisyphus+238557.100.1.1 1570025968 installed <13>Feb 21 05:56:38 rpmi: libcryptsetup-2.2.2-alt1 sisyphus+242851.300.2.1 1576248417 installed <13>Feb 21 05:56:38 rpmi: startup-0.9.9.9-alt1 sisyphus+242122.100.1.1 1575282386 installed <13>Feb 21 05:56:38 rpmi: systemd-utils-1:244.3-alt2 sisyphus+246535.200.2.1 1581950419 installed <13>Feb 21 05:56:38 rpmi: dmsetup-1.02.169-alt1 sisyphus+246686.100.1.1 1582206061 installed <86>Feb 21 05:56:38 groupadd[2106051]: group added to /etc/group: name=tape, GID=497 <86>Feb 21 05:56:38 groupadd[2106051]: group added to /etc/gshadow: name=tape <86>Feb 21 05:56:38 groupadd[2106051]: new group: name=tape, GID=497 <86>Feb 21 05:56:38 groupadd[2106061]: group added to /etc/group: name=dialout, GID=496 <86>Feb 21 05:56:38 groupadd[2106061]: group added to /etc/gshadow: name=dialout <86>Feb 21 05:56:38 groupadd[2106061]: new group: name=dialout, GID=496 <86>Feb 21 05:56:38 groupadd[2106073]: group added to /etc/group: name=input, GID=495 <86>Feb 21 05:56:38 groupadd[2106073]: group added to /etc/gshadow: name=input <86>Feb 21 05:56:38 groupadd[2106073]: new group: name=input, GID=495 <86>Feb 21 05:56:38 groupadd[2106080]: group added to /etc/group: name=video, GID=494 <86>Feb 21 05:56:38 groupadd[2106080]: group added to /etc/gshadow: name=video <86>Feb 21 05:56:38 groupadd[2106080]: new group: name=video, GID=494 <86>Feb 21 05:56:38 groupadd[2106088]: group added to /etc/group: name=render, GID=493 <86>Feb 21 05:56:38 groupadd[2106088]: group added to /etc/gshadow: name=render <86>Feb 21 05:56:38 groupadd[2106088]: new group: name=render, GID=493 <13>Feb 21 05:56:38 rpmi: udev-1:244.3-alt2 sisyphus+246535.200.2.1 1581950419 installed <86>Feb 21 05:56:38 groupadd[2106194]: group added to /etc/group: name=iputils, GID=492 <86>Feb 21 05:56:38 groupadd[2106194]: group added to /etc/gshadow: name=iputils <86>Feb 21 05:56:38 groupadd[2106194]: new group: name=iputils, GID=492 <86>Feb 21 05:56:38 useradd[2106208]: new user: name=iputils, UID=499, GID=492, home=/dev/null, shell=/dev/null <86>Feb 21 05:56:38 groupadd[2106224]: group added to /etc/group: name=netadmin, GID=491 <86>Feb 21 05:56:38 groupadd[2106224]: group added to /etc/gshadow: name=netadmin <86>Feb 21 05:56:38 groupadd[2106224]: new group: name=netadmin, GID=491 <13>Feb 21 05:56:38 rpmi: iputils-20190709-alt2 sisyphus+241803.100.2.1 1575176407 installed sysctl: cannot stat /proc/sys/net/ipv4/ping_group_range: No such file or directory <13>Feb 21 05:56:38 rpmi: iproute2-5.4.0-alt1 sisyphus+242773.100.1.1 1576106895 installed <13>Feb 21 05:56:38 rpmi: rdma-core-27.0-alt1 sisyphus+243030.200.2.1 1576485521 installed <13>Feb 21 05:56:38 rpmi: ibacm-27.0-alt1 sisyphus+243030.200.2.1 1576485521 installed <13>Feb 21 05:56:38 rpmi: rdma-core-devel-27.0-alt1 sisyphus+243030.200.2.1 1576485521 installed <13>Feb 21 05:56:39 rpmi: openmpi-devel-2.0.1-alt8 sisyphus+229856.100.1.1 1558540100 installed <13>Feb 21 05:56:39 rpmi: libhdf5-mpi-devel-1.8.13-alt4 sisyphus+223496.100.1.1 1551620824 installed <13>Feb 21 05:56:39 rpmi: libnetcdf-mpi-devel-4.4.1.1-alt2 sisyphus+238557.100.1.1 1570025968 installed <13>Feb 21 05:56:39 rpmi: libcurl-devel-7.68.0-alt1 sisyphus+244054.100.1.1 1578655310 installed <13>Feb 21 05:56:39 rpmi: libexpat-devel-2.2.4-alt1 1503305341 installed <13>Feb 21 05:56:39 rpmi: flex-2.6.4.0.88.9801-alt1 sisyphus+221902.2300.4.1 1550596258 installed Building target platforms: x86_64 Building for target x86_64 Wrote: /usr/src/in/nosrpm/libnetcdff6-mpi-4.4.4-alt1.nosrc.rpm Installing libnetcdff6-mpi-4.4.4-alt1.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.60068 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf libnetcdff6-mpi-4.4.4 + echo 'Source #0 (libnetcdff6-mpi-4.4.4.tar):' Source #0 (libnetcdff6-mpi-4.4.4.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/libnetcdff6-mpi-4.4.4.tar + cd libnetcdff6-mpi-4.4.4 + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #1 (netcdf-fortran-4.4.4-alt-build.patch):' Patch #1 (netcdf-fortran-4.4.4-alt-build.patch): + /usr/bin/patch -p1 patching file netcdf-fortran.pc.in patching file nf-config.in + sed -i 's|@MPIDIR@|/usr/lib64/openmpi|' netcdf-fortran.pc.in nf-config.in + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.3779 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdff6-mpi-4.4.4 + mpi-selector --set openmpi + source /usr/lib64/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib64/openmpi/bin ++ PATH=/usr/lib64/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib64/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib64/openmpi/man ++ MANPATH=/usr/lib64/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + autoreconf -fisv autoreconf-default: Entering directory `.' autoreconf-default: configure.ac: not using Gettext autoreconf-default: running: aclocal --force -I m4 autoreconf-default: configure.ac: tracing autoreconf-default: running: libtoolize --force --install libtoolize-default: putting auxiliary files in '.'. libtoolize-default: linking file './config.guess' libtoolize-default: linking file './config.sub' libtoolize-default: linking file './install-sh' libtoolize-default: linking file './ltmain.sh' libtoolize-default: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize-default: linking file 'm4/libtool.m4' libtoolize-default: linking file 'm4/ltoptions.m4' libtoolize-default: linking file 'm4/ltsugar.m4' libtoolize-default: linking file 'm4/ltversion.m4' libtoolize-default: linking file 'm4/lt~obsolete.m4' autoreconf-default: configure.ac: not using Intltool autoreconf-default: configure.ac: not using gtk-doc autoreconf-default: running: /usr/bin/autoconf-2.60 --force autoreconf-default: running: /usr/bin/autoheader-2.60 --force autoreconf-default: running: automake --add-missing --force-missing configure.ac:128: installing './compile' configure.ac:31: installing './missing' fortran/Makefile.am: installing './depcomp' autoreconf-default: Leaving directory `.' + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export FFLAGS + '[' -n '' ']' ++ printf %s '-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS= + export ASFLAGS + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + ./configure --build=x86_64-alt-linux --host=x86_64-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --disable-silent-rules --without-included-gettext --enable-shared --enable-static=no --bindir=/usr/lib64/openmpi/bin --libdir=/usr/lib64/openmpi/lib --includedir=/usr/lib64/openmpi/include configure: WARNING: unrecognized options: --without-included-gettext configure: netCDF-Fortran 4.4.4 checking build system type... x86_64-alt-linux-gnu checking host system type... x86_64-alt-linux-gnu checking target system type... x86_64-alt-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether extra valgrind tests should be run... no checking whether parallel IO tests should be run... no checking whether netCDF extra tests should be run (developers only)... no checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... no configure: WARNING: dot not found - will use simple charts in documentation configure: finding C compiler checking for x86_64-alt-linux-gcc... x86_64-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-alt-linux-gcc accepts -g... yes checking for x86_64-alt-linux-gcc option to accept ISO C89... none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-alt-linux-gcc... none checking for an ANSI C-conforming const... yes configure: finding Fortran compiler checking for x86_64-alt-linux-gfortran... x86_64-alt-linux-gfortran checking whether we are using the GNU Fortran compiler... yes checking whether x86_64-alt-linux-gfortran accepts -g... yes checking for x86_64-alt-linux-x86_64-alt-linux-gfortran... no checking for x86_64-alt-linux-gfortran... x86_64-alt-linux-gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether x86_64-alt-linux-gfortran accepts -g... yes checking whether Fortran compiler is checked for ISO_C_BINDING support... yes checking for Fortran flag to compile .f90 files... none checking fortran 90 modules inclusion flag... -I checking if Fortran compiler supports Fortran 2003 ISO_C_BINDING... yes checking if Fortran compiler supports Fortran 2008 ISO_FORTRAN_ENV additions... yes checking if Fortran compiler supports TS29113 standard extension... yes checking whether F03 native code is desired... yes checking whether fortran type sizes should be checked... yes checking whether large file (> 2GB) tests should be run... no checking whether benchmarks should be run (experimental)... no checking where to put large temp files if large file tests are run... . configure: setting up libtool checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-alt-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the 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BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-alt-linux-gnu file names to x86_64-alt-linux-gnu format... func_convert_file_noop checking how to convert x86_64-alt-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-alt-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... (cached) pass_all checking for x86_64-alt-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-alt-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-alt-linux-strip... no checking for strip... strip checking for x86_64-alt-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from x86_64-alt-linux-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-alt-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-alt-linux-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-alt-linux-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-alt-linux-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-alt-linux-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-alt-linux-gcc static flag -static works... no checking if x86_64-alt-linux-gcc supports -c -o file.o... yes checking if x86_64-alt-linux-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-alt-linux-gfortran option to produce PIC... -fPIC checking if x86_64-alt-linux-gfortran PIC flag -fPIC works... yes checking if x86_64-alt-linux-gfortran static flag -static works... no checking if x86_64-alt-linux-gfortran supports -c -o file.o... yes checking if x86_64-alt-linux-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-alt-linux-gfortran option to produce PIC... -fPIC checking if x86_64-alt-linux-gfortran PIC flag -fPIC works... yes checking if x86_64-alt-linux-gfortran static flag -static works... no checking if x86_64-alt-linux-gfortran supports -c -o file.o... yes checking if x86_64-alt-linux-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: finding other utilities configure: trying to set fortran flags for this platform checking what FC is set to... x86_64-alt-linux-gfortran checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for /usr/bin/nm... /usr/bin/nm -B checking nm flags... checking for C-equivalent to Fortran routine "SUB"... sub_ checking for Fortran "byte"... yes checking for Fortran "integer*2"... yes checking if Fortran "byte" is C "signed char"... yes checking if Fortran "byte" is C "short"... no checking if Fortran "byte" is C "int"... no checking if Fortran "byte" is C "long"... no checking if Fortran "integer*2" is C "short"... yes checking if Fortran "integer*2" is C "int"... no checking if Fortran "integer*2" is C "long"... no checking if Fortran "integer" is C "int"... yes checking if Fortran "real" is C "float"... yes checking if Fortran "doubleprecision" is C "double"... yes checking for Fortran-equivalent to netCDF "byte"... byte checking for Fortran-equivalent to netCDF "short"... integer*2 checking whether extra example tests should be run... no checking whether a win32 DLL is desired... no configure: checking types, headers, and functions checking netcdf.h usability... yes checking netcdf.h presence... no configure: WARNING: netcdf.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: netcdf.h: proceeding with the compiler's result checking for netcdf.h... yes checking for library containing nc_open... -lnetcdf checking for nc_def_opaque... yes checking for nccreate... yes checking for nc_set_log_level... no checking for oc_open... yes checking for nc_use_parallel_enabled... yes checking netCDF v2 API present... yes checking netCDF-4 present... yes checking for stdlib.h... (cached) yes checking for sys/types.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/stat.h... (cached) yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking whether time.h and sys/time.h may both be included... yes checking for vprintf... yes checking for _doprnt... no checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for size_t... (cached) yes checking for off_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking for uchar... no checking for longlong... no checking whether char is unsigned... no checking size of short... 2 checking size of int... 4 checking size of long... 8 checking size of float... 4 checking size of double... 8 checking size of off_t... 8 checking size of size_t... 8 checking size of ptrdiff_t... 8 configure: generating header files and makefiles checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating nf-config config.status: creating netcdf-fortran.pc config.status: creating docs/Makefile config.status: creating libsrc/Makefile config.status: creating fortran/Makefile config.status: creating nf_test/Makefile config.status: creating nf03_test/Makefile config.status: creating CMakeExtras/Makefile config.status: creating examples/Makefile config.status: creating examples/F90/Makefile config.status: creating examples/F77/Makefile config.status: creating config.h config.status: creating libsrc/nfconfig1.inc config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --without-included-gettext + make -j8 make all-recursive Making all in fortran make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nc_data.o module_netcdf_nc_data.F90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_nc_interfaces.o module_netcdf_nc_interfaces.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nf_data.o module_netcdf_nf_data.F90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nf_interfaces.o module_netcdf_nf_interfaces.F90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_f03.o module_netcdf_f03.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_fortv2_c_interfaces.o module_netcdf_fortv2_c_interfaces.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf4_nc_interfaces.o module_netcdf4_nc_interfaces.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf4_nf_interfaces.o module_netcdf4_nf_interfaces.F90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf4_f03.o module_netcdf4_f03.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o typeSizes.o typeSizes.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o netcdf4.o netcdf4.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' echo '! NetCDF-3.' > netcdf.inc cat ../fortran/netcdf3.inc >> netcdf.inc echo >> netcdf.inc echo '! NetCDF-4.' >> netcdf.inc cat ../fortran/netcdf4.inc >> netcdf.inc echo >> netcdf.inc echo '! NetCDF-2.' >> netcdf.inc cat ../fortran/netcdf2.inc >> netcdf.inc make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make all-am make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o typeSizes.lo typeSizes.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c typeSizes.f90 -fPIC -o .libs/typeSizes.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nc_data.lo module_netcdf_nc_data.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c module_netcdf_nc_data.F90 -fPIC -o .libs/module_netcdf_nc_data.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_nc_interfaces.lo module_netcdf_nc_interfaces.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf_nc_interfaces.f90 -fPIC -o .libs/module_netcdf_nc_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nf_data.lo module_netcdf_nf_data.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c module_netcdf_nf_data.F90 -fPIC -o .libs/module_netcdf_nf_data.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nf_interfaces.lo module_netcdf_nf_interfaces.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c module_netcdf_nf_interfaces.F90 -fPIC -o .libs/module_netcdf_nf_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_f03.lo module_netcdf_f03.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf_f03.f90 -fPIC -o .libs/module_netcdf_f03.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_attio.lo nf_attio.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_attio.F90 -fPIC -o .libs/nf_attio.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_control.lo nf_control.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_control.F90 -fPIC -o .libs/nf_control.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_dim.lo nf_dim.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_dim.f90 -fPIC -o .libs/nf_dim.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_misc.lo nf_misc.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_misc.f90 -fPIC -o .libs/nf_misc.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_genatt.lo nf_genatt.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_genatt.f90 -fPIC -o .libs/nf_genatt.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_geninq.lo nf_geninq.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_geninq.f90 -fPIC -o .libs/nf_geninq.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_genvar.lo nf_genvar.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_genvar.f90 -fPIC -o .libs/nf_genvar.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_vario.lo nf_vario.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_vario.F90 -fPIC -o .libs/nf_vario.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_var1io.lo nf_var1io.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_var1io.F90 -fPIC -o .libs/nf_var1io.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_varaio.lo nf_varaio.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_varaio.F90 -fPIC -o .libs/nf_varaio.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_varmio.lo nf_varmio.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_varmio.F90 -fPIC -o .libs/nf_varmio.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_varsio.lo nf_varsio.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_varsio.F90 -fPIC -o .libs/nf_varsio.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf4_nc_interfaces.lo module_netcdf4_nc_interfaces.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf4_nc_interfaces.f90 -fPIC -o .libs/module_netcdf4_nc_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf4_nf_interfaces.lo module_netcdf4_nf_interfaces.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c module_netcdf4_nf_interfaces.F90 -fPIC -o .libs/module_netcdf4_nf_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf4_f03.lo module_netcdf4_f03.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf4_f03.f90 -fPIC -o .libs/module_netcdf4_f03.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DLONGLONG_IS_LONG -c -o nf_lib.lo nf_lib.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DLONGLONG_IS_LONG -c nf_lib.c -fPIC -DPIC -o .libs/nf_lib.o nf_lib.c: In function 'nc_inq_compound_field_ndims': nf_lib.c:130:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 130 | if ((ret = nc_inq_compound_field(ncid, xtype, fieldid, NULL, NULL, | ^~ nf_lib.c:133:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 133 | return NC_NOERR; | ^~~~~~ nf_lib.c: In function 'nc_inq_numgrps': nf_lib.c:177:1: warning: control reaches end of non-void function [-Wreturn-type] 177 | } | ^ nf_lib.c: In function 'nc_inq_numtypes': nf_lib.c:187:1: warning: control reaches end of non-void function [-Wreturn-type] 187 | } | ^ make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_nc4.lo nf_nc4.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_nc4.f90 -fPIC -o .libs/nf_nc4.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o netcdf4.lo netcdf4.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c netcdf4.f90 -fPIC -o .libs/netcdf4.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DLONGLONG_IS_LONG -c -o nf_v2compat.lo nf_v2compat.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DLONGLONG_IS_LONG -c nf_v2compat.c -fPIC -DPIC -o .libs/nf_v2compat.o nf_v2compat.c: In function 'c_ncapt': nf_v2compat.c:1554:8: warning: 'status' may be used uninitialized in this function [-Wmaybe-uninitialized] 1554 | if (status == 0) | ^ make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_fortv2_c_interfaces.lo module_netcdf_fortv2_c_interfaces.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf_fortv2_c_interfaces.f90 -fPIC -o .libs/module_netcdf_fortv2_c_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_fortv2.lo nf_fortv2.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_fortv2.f90 -fPIC -o .libs/nf_fortv2.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=link x86_64-alt-linux-gfortran -g -O2 -version-number 6:1:1 -o libnetcdff.la -rpath /usr/lib64/openmpi/lib typeSizes.lo module_netcdf_nc_data.lo module_netcdf_nc_interfaces.lo module_netcdf_nf_data.lo module_netcdf_nf_interfaces.lo module_netcdf_f03.lo nf_attio.lo nf_control.lo nf_dim.lo nf_misc.lo nf_genatt.lo nf_geninq.lo nf_genvar.lo nf_vario.lo nf_var1io.lo nf_varaio.lo nf_varmio.lo nf_varsio.lo module_netcdf4_nc_interfaces.lo module_netcdf4_nf_interfaces.lo module_netcdf4_f03.lo nf_lib.lo nf_nc4.lo netcdf4.lo nf_v2compat.lo module_netcdf_fortv2_c_interfaces.lo nf_fortv2.lo -lnetcdf libtool: link: x86_64-alt-linux-gfortran -shared -fPIC .libs/typeSizes.o .libs/module_netcdf_nc_data.o .libs/module_netcdf_nc_interfaces.o .libs/module_netcdf_nf_data.o .libs/module_netcdf_nf_interfaces.o .libs/module_netcdf_f03.o .libs/nf_attio.o .libs/nf_control.o .libs/nf_dim.o .libs/nf_misc.o .libs/nf_genatt.o .libs/nf_geninq.o .libs/nf_genvar.o .libs/nf_vario.o .libs/nf_var1io.o .libs/nf_varaio.o .libs/nf_varmio.o .libs/nf_varsio.o .libs/module_netcdf4_nc_interfaces.o .libs/module_netcdf4_nf_interfaces.o .libs/module_netcdf4_f03.o .libs/nf_lib.o .libs/nf_nc4.o .libs/netcdf4.o .libs/nf_v2compat.o .libs/module_netcdf_fortv2_c_interfaces.o .libs/nf_fortv2.o -lnetcdf -g -O2 -Wl,-soname -Wl,libnetcdff.so.6 -o .libs/libnetcdff.so.6.1.1 libtool: link: (cd ".libs" && rm -f "libnetcdff.so.6" && ln -s "libnetcdff.so.6.1.1" "libnetcdff.so.6") libtool: link: (cd ".libs" && rm -f "libnetcdff.so" && ln -s "libnetcdff.so.6.1.1" "libnetcdff.so") libtool: link: ( cd ".libs" && rm -f "libnetcdff.la" && ln -s "../libnetcdff.la" "libnetcdff.la" ) make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' Making all in nf_test make[2]: Nothing to be done for 'all'. Making all in nf03_test make[2]: Nothing to be done for 'all'. Making all in docs make[2]: Nothing to be done for 'all'. Making all in examples Making all in F77 make[3]: Nothing to be done for 'all'. Making all in F90 make all-am make[4]: Nothing to be done for 'all-am'. make[3]: Nothing to be done for 'all-am'. Making all in CMakeExtras make[2]: Nothing to be done for 'all'. + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.64655 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/libnetcdff6-mpi-buildroot + : + /bin/rm -rf -- /usr/src/tmp/libnetcdff6-mpi-buildroot + cd libnetcdff6-mpi-4.4.4 + source /usr/lib64/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib64/openmpi/bin ++ PATH=/usr/lib64/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib64/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib64/openmpi/man ++ MANPATH=/usr/lib64/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/libnetcdff6-mpi-buildroot make: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' Making install in fortran make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make install-am make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib' /bin/sh ../libtool --mode=install /bin/install -p libnetcdff.la '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib' libtool: install: /bin/install -p .libs/libnetcdff.so.6.1.1 /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdff.so.6.1.1 libtool: install: (cd /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib && { ln -s -f libnetcdff.so.6.1.1 libnetcdff.so.6 || { rm -f libnetcdff.so.6 && ln -s libnetcdff.so.6.1.1 libnetcdff.so.6; }; }) libtool: install: (cd /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib && { ln -s -f libnetcdff.so.6.1.1 libnetcdff.so || { rm -f libnetcdff.so && ln -s libnetcdff.so.6.1.1 libnetcdff.so; }; }) libtool: install: /bin/install -p .libs/libnetcdff.lai /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdff.la libtool: warning: remember to run 'libtool --finish /usr/lib64/openmpi/lib' /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include' /bin/install -p -m 644 netcdf_nc_data.mod netcdf_nc_interfaces.mod netcdf_nf_data.mod netcdf_nf_interfaces.mod netcdf_f03.mod netcdf_fortv2_c_interfaces.mod netcdf4_nc_interfaces.mod netcdf4_nf_interfaces.mod netcdf4_f03.mod typesizes.mod netcdf.mod netcdf.inc '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include' make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' Making install in nf_test make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf_test' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf_test' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf_test' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf_test' Making install in nf03_test make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf03_test' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf03_test' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf03_test' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf03_test' Making install in docs make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/docs' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/docs' make[2]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/man/man3' /bin/install -p -m 644 netcdf_fortran.3 '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/man/man3' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/docs' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/docs' Making install in examples make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' Making install in F77 make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F77' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F77' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F77' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F77' Making install in F90 make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make install-am make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[4]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' Making install in CMakeExtras make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/CMakeExtras' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/CMakeExtras' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/CMakeExtras' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/CMakeExtras' make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/bin' /bin/install -p nf-config '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/bin' /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/pkgconfig' /bin/install -p -m 644 netcdf-fortran.pc '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/pkgconfig' make install-data-hook make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' +-------------------------------------------------------------+ | Congratulations! You have successfully installed the netCDF | | Fortran libraries. | | | | You can use script "nf-config" to find out the relevant | | compiler options to build your application. Enter | | | | nf-config --help | | | | for additional information. | | | | CAUTION: | | | | If you have not already run "make check", then we strongly | | recommend you do so. It does not take very long. | | | | Before using netCDF to store important data, test your | | build with "make check". | | | | NetCDF is tested nightly on many platforms at Unidata | | but your platform is probably different in some ways. | | | | If any tests fail, please see the netCDF web site: | | http://www.unidata.ucar.edu/software/netcdf/ | | | | NetCDF is developed and maintained at the Unidata Program | | Center. Unidata provides a broad array of data and software | | tools for use in geoscience education and research. | | http://www.unidata.ucar.edu | +-------------------------------------------------------------+ make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' make: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' + install -d /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf + mv /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf.inc /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf4_f03.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf4_nc_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf4_nf_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_f03.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_fortv2_c_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_nc_data.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_nc_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_nf_data.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_nf_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/typesizes.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf/ + rm -f /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdff.la + install -d /usr/src/tmp/libnetcdff6-mpi-buildroot/etc/alternatives/packages.d + mkdir -p /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64 + pushd /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib ~/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib ~/RPM/BUILD/libnetcdff6-mpi-4.4.4 + for i in libnetcdff.so.* + ln -s ../../usr/lib64/openmpi/lib/libnetcdff.so.6 /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/ + echo '/usr/lib64/libnetcdff.so.6 /usr/lib64/openmpi/lib/libnetcdff.so.6 30' + for i in libnetcdff.so.* + ln -s ../../usr/lib64/openmpi/lib/libnetcdff.so.6.1.1 /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/ + echo '/usr/lib64/libnetcdff.so.6.1.1 /usr/lib64/openmpi/lib/libnetcdff.so.6.1.1 30' ++ ls libnetcdff.so + for i in $(ls *.so) + echo '/usr/lib64/libnetcdff.so /usr/lib64/openmpi/lib/libnetcdff.so 30' + echo '/usr/bin/nf-config /usr/lib64/openmpi/bin/nf-config 30' + echo '/usr/lib64/pkgconfig/netcdf-fortran.pc /usr/lib64/openmpi/lib/pkgconfig/netcdf-fortran.pc 30' + popd ~/RPM/BUILD/libnetcdff6-mpi-4.4.4 + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/libnetcdff6-mpi-buildroot (auto) mode of './usr/lib64/openmpi/lib/libnetcdff.so.6.1.1' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/libnetcdff6-mpi-buildroot (binconfig,pkgconfig,libtool,desktop) Checking contents of files in /usr/src/tmp/libnetcdff6-mpi-buildroot/ (default) Compressing files in /usr/src/tmp/libnetcdff6-mpi-buildroot (auto) Adjusting library links in /usr/src/tmp/libnetcdff6-mpi-buildroot ./usr/lib64: ./usr/lib64/openmpi/lib: libnetcdff.so.6 -> libnetcdff.so.6.1.1 Verifying ELF objects in /usr/src/tmp/libnetcdff6-mpi-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Hardlinking identical .pyc and .pyo files Processing files: libnetcdff6-mpi-4.4.4-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.1288 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdff6-mpi-4.4.4 + DOCDIR=/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + export DOCDIR + rm -rf /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + /bin/mkdir -p /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + cp -prL COPYRIGHT README.md /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + chmod -R go-w /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + chmod -R a+rX /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.RltwLv find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) lib.prov: /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/libnetcdff.so.6: 547 symbols, 20 bpp Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.CzFQ5t find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services) Provides: libnetcdff-mpi = 4.4.4-alt1, libnetcdff6-mpi = 4.4.4-alt1, /usr/lib64/libnetcdff.so.6 = 30, /usr/lib64/libnetcdff.so.6.1.1 = 30, libnetcdff.so.6()(64bit) = set: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 Requires: libhdf5-8-mpi, libnetcdf11-mpi, /etc/alternatives/packages.d, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.4)(64bit), libgfortran.so.5()(64bit) >= set:okAVg4hvbZDOcso4VH48Z0FAcqgOidMv8D38x0, libgfortran.so.5(GFORTRAN_8)(64bit), libnetcdf.so.11()(64bit) >= set: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, rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Requires(post): alternatives Requires(preun): alternatives Conflicts: libnetcdff6-mpi < 4.4.4-alt1 Obsoletes: libnetcdff6-mpi < 4.4.4-alt1 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.ysIl7t Creating libnetcdff6-mpi-debuginfo package Processing files: libnetcdff-mpi-devel-4.4.4-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.0wbDJv find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.OnG46v find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services) find-requires: FINDPACKAGE-COMMANDS: cat Provides: /usr/bin/nf-config = 30, /usr/lib64/libnetcdff.so = 30, /usr/lib64/pkgconfig/netcdf-fortran.pc = 30 Requires: libnetcdff6-mpi = 4.4.4-alt1, libnetcdf-mpi-devel, /bin/sh, /etc/alternatives/packages.d, /usr/lib64/openmpi/lib/libnetcdff.so.6.1.1, coreutils Requires(post): alternatives Requires(preun): alternatives Conflicts: libnetcdff-devel < 4.0.1-alt6 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.nQiaWt Processing files: libnetcdff6-mpi-doc-4.4.4-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.67386 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdff6-mpi-4.4.4 + DOCDIR=/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + export DOCDIR + rm -rf /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + /bin/mkdir -p /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + cp -prL docs/netcdf_fortran_4.4.2dev_notes_RW.pdf docs/CMakeLists.txt docs/footer.html examples /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + chmod -R go-w /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + chmod -R a+rX /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.7nk8pu find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.0zjkMv find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services) Conflicts: libnetcdff-devel Processing files: libnetcdff6-mpi-debuginfo-4.4.4-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.oqqSox find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Lkhrhu find-requires: running scripts (debuginfo) Provides: debug64(libnetcdff.so.6) Requires: libnetcdff6-mpi = 4.4.4-alt1, debug64(libc.so.6), debug64(libgfortran.so.5), debug64(libnetcdf.so.11) Removing 1 extra deps from libnetcdff-mpi-devel due to dependency on libnetcdff6-mpi Removing 2 extra deps from libnetcdff-mpi-devel due to repentancy on libnetcdff6-mpi Wrote: /usr/src/RPM/RPMS/x86_64/libnetcdff6-mpi-4.4.4-alt1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libnetcdff-mpi-devel-4.4.4-alt1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/noarch/libnetcdff6-mpi-doc-4.4.4-alt1.noarch.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libnetcdff6-mpi-debuginfo-4.4.4-alt1.x86_64.rpm 77.12user 14.50system 1:54.71elapsed 79%CPU (0avgtext+0avgdata 231900maxresident)k 0inputs+0outputs (0major+2262939minor)pagefaults 0swaps 90.39user 22.47system 2:15.32elapsed 83%CPU (0avgtext+0avgdata 231900maxresident)k 5192inputs+0outputs (0major+2813818minor)pagefaults 0swaps --- libnetcdff6-mpi-4.4.4-alt1.x86_64.rpm.repo 2017-08-29 12:11:56.000000000 +0000 +++ libnetcdff6-mpi-4.4.4-alt1.x86_64.rpm.hasher 2020-02-21 05:58:40.969469651 +0000 @@ -15,5 +15,5 @@ Requires: libc.so.6(GLIBC_2.4)(64bit) -Requires: libgfortran.so.3()(64bit) >= set:okAVg4hvbZDOcso4VH48Z0FAcqgOidMv8D38x0 +Requires: libgfortran.so.5()(64bit) >= set:okAVg4hvbZDOcso4VH48Z0FAcqgOidMv8D38x0 Requires: rpmlib(SetVersions) -Requires: libgfortran.so.3(GFORTRAN_1.0)(64bit) +Requires: libgfortran.so.5(GFORTRAN_8)(64bit) Requires: libnetcdf.so.11()(64bit) >= set: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 --- libnetcdff6-mpi-debuginfo-4.4.4-alt1.x86_64.rpm.repo 2017-08-29 12:11:56.000000000 +0000 +++ libnetcdff6-mpi-debuginfo-4.4.4-alt1.x86_64.rpm.hasher 2020-02-21 05:58:40.997468719 +0000 @@ -45,3 +45,3 @@ Requires: debug64(libc.so.6) -Requires: debug64(libgfortran.so.3) +Requires: debug64(libgfortran.so.5) Requires: debug64(libnetcdf.so.11)