<86>Nov 8 01:44:16 userdel[65298]: delete user 'rooter' <86>Nov 8 01:44:16 groupadd[65347]: group added to /etc/group: name=rooter, GID=678 <86>Nov 8 01:44:16 groupadd[65347]: group added to /etc/gshadow: name=rooter <86>Nov 8 01:44:16 groupadd[65347]: new group: name=rooter, GID=678 <86>Nov 8 01:44:16 useradd[65424]: new user: name=rooter, UID=678, GID=678, home=/root, shell=/bin/bash <86>Nov 8 01:44:16 userdel[65504]: delete user 'builder' <86>Nov 8 01:44:16 userdel[65504]: removed group 'builder' owned by 'builder' <86>Nov 8 01:44:16 userdel[65504]: removed shadow group 'builder' owned by 'builder' <86>Nov 8 01:44:17 groupadd[65649]: group added to /etc/group: name=builder, GID=679 <86>Nov 8 01:44:17 groupadd[65649]: group added to /etc/gshadow: name=builder <86>Nov 8 01:44:17 groupadd[65649]: new group: name=builder, GID=679 <86>Nov 8 01:44:17 useradd[65701]: new user: name=builder, UID=679, GID=679, home=/usr/src, shell=/bin/bash warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found <13>Nov 8 01:44:21 rpmi: libidn2-2.0.5-alt1 1526923871 installed <13>Nov 8 01:44:21 rpmi: libquadmath0-7.3.1-alt5 1531512602 installed <13>Nov 8 01:44:21 rpmi: udev-rules-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 8 01:44:21 rpmi: libkmod-25-alt1 1522318405 installed <13>Nov 8 01:44:21 rpmi: kmod-25-alt1 1522318405 installed <13>Nov 8 01:44:21 rpmi: libgfortran4-7.3.1-alt5 1531512602 installed <13>Nov 8 01:44:21 rpmi: libnuma-2.0.11-alt1 1450022595 installed <13>Nov 8 01:44:21 rpmi: libmnl-1.0.4-alt1 1480571789 installed <13>Nov 8 01:44:21 rpmi: liblz4-1:1.8.3-alt1 sisyphus.213737.100 1538009646 installed <13>Nov 8 01:44:21 rpmi: libiptables-1.4.21-alt3 1435789456 installed <13>Nov 8 01:44:21 rpmi: msulogin-1.0-alt1 1366288481 installed <13>Nov 8 01:44:21 rpmi: mount-2.32-alt2 1528296098 installed <13>Nov 8 01:44:22 rpmi: libdevmapper-1.02.150-alt1 1534113654 installed <13>Nov 8 01:44:22 rpmi: sysvinit-2.88-alt5 1424350685 installed <13>Nov 8 01:44:22 rpmi: libnetlink-4.18.0-alt1 1534194780 installed <13>Nov 8 01:44:22 rpmi: libnuma-devel-2.0.11-alt1 1450022595 installed <13>Nov 8 01:44:22 rpmi: libgfortran3-6.3.1-alt3.1 sisyphus.213581.600 1538069106 installed <13>Nov 8 01:44:22 rpmi: zlib-devel-1.2.8-alt1 1371079009 installed <13>Nov 8 01:44:22 rpmi: libibumad-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 8 01:44:22 rpmi: libpci-3.6.2-alt1.S1 sisyphus.213446.100 1537513663 installed <13>Nov 8 01:44:22 rpmi: pciids-20181105-alt1 sisyphus.216126.100 1541459123 installed <13>Nov 8 01:44:22 rpmi: pciutils-3.6.2-alt1.S1 sisyphus.213446.100 1537513663 installed <13>Nov 8 01:44:22 rpmi: libsz2-2.1-alt4 1300649105 installed <13>Nov 8 01:44:22 rpmi: torque-4.2.1-alt1.qa2 1518435580 installed <13>Nov 8 01:44:22 rpmi: libtorque-4.2.1-alt1.qa2 1518435580 installed <13>Nov 8 01:44:22 rpmi: libnl3-3.4.0-alt2 1507570084 installed <13>Nov 8 01:44:22 rpmi: libibverbs-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 8 01:44:22 rpmi: librdmacm-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 8 01:44:22 rpmi: tcsh-6.20.00-alt2 1503603377 installed <13>Nov 8 01:44:22 rpmi: rpm-macros-mpi-selector-1.0.3-alt3 1504498675 installed <13>Nov 8 01:44:22 rpmi: mpi-selector-1.0.3-alt3 1504498675 installed <13>Nov 8 01:44:22 rpmi: openmpi-2.0.1-alt6 1530784288 installed <13>Nov 8 01:44:22 rpmi: libpnetcdf-1.8.1-alt1 1505818746 installed <13>Nov 8 01:44:22 rpmi: libexpat-2.2.4-alt1 1503305341 installed <13>Nov 8 01:44:22 rpmi: publicsuffix-list-dafsa-20181106-alt1 sisyphus.216228.100 1541611754 installed <13>Nov 8 01:44:22 rpmi: libpsl-0.20.2-alt2 sisyphus.216228.200 1541611883 installed <13>Nov 8 01:44:22 rpmi: libnghttp2-1.34.0-alt1 sisyphus.214524.100 1539249616 installed <13>Nov 8 01:44:22 rpmi: libverto-0.3.0-alt1_5 1525957716 installed <13>Nov 8 01:44:22 rpmi: libkeyutils-1.5.10-alt1 1489994069 installed <13>Nov 8 01:44:22 rpmi: libcom_err-1.44.3-alt1 1532134713 installed <13>Nov 8 01:44:22 rpmi: libatm-2.5.1-alt4 1349943442 installed <13>Nov 8 01:44:22 rpmi: chrooted-0.3.9-alt1 1524554183 installed <13>Nov 8 01:44:22 rpmi: chrooted-resolv-0.3.1-alt2 1176155257 installed <13>Nov 8 01:44:22 rpmi: gcc-fortran-common-1.4.22-alt1 1519183788 installed <13>Nov 8 01:44:22 rpmi: libgfortran7-devel-7.3.1-alt5 1531512602 installed <13>Nov 8 01:44:23 rpmi: gcc7-fortran-7.3.1-alt5 1531512602 installed <13>Nov 8 01:44:23 rpmi: gcc-fortran-7-alt6 1528289185 installed <13>Nov 8 01:44:23 rpmi: gcc-c++-common-1.4.22-alt1 1519183788 installed <13>Nov 8 01:44:23 rpmi: libstdc++7-devel-7.3.1-alt5 1531512602 installed <13>Nov 8 01:44:24 rpmi: gcc7-c++-7.3.1-alt5 1531512602 installed <13>Nov 8 01:44:24 rpmi: gcc-c++-7-alt6 1528289185 installed <13>Nov 8 01:44:24 rpmi: libseccomp-2.3.3-alt1.S1.1 1525141482 installed <13>Nov 8 01:44:24 rpmi: libpcre2-10.32-alt1 sisyphus.212994.100 1536866755 installed <13>Nov 8 01:44:24 rpmi: libjson-c-0.12.1-alt2 1517446108 installed <13>Nov 8 01:44:24 rpmi: libargon2-20171227-alt1 1517446172 installed <13>Nov 8 01:44:24 rpmi: libgpg-error-1.31-alt1.S1 1529015796 installed <13>Nov 8 01:44:24 rpmi: libgcrypt20-1.8.3-alt3 sisyphus.214019.140 1538990261 installed <13>Nov 8 01:44:24 rpmi: libsystemd-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 8 01:44:24 rpmi: libcryptsetup-2.0.2-alt1 1522279986 installed <13>Nov 8 01:44:24 rpmi: hwclock-1:2.32-alt2 1528296098 installed <13>Nov 8 01:44:24 rpmi: startup-0.9.9.5-alt1.2 1397832469 installed <13>Nov 8 01:44:24 rpmi: systemd-utils-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 8 01:44:25 rpmi: udev-hwdb-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 8 01:44:25 rpmi: hashalot-0.3-alt1.qa1 1366323553 installed <13>Nov 8 01:44:25 rpmi: losetup-2.32-alt2 1528296098 installed <13>Nov 8 01:44:25 rpmi: lsblk-2.32-alt2 1528296098 installed <13>Nov 8 01:44:25 rpmi: dmsetup-1.02.150-alt1 1534113654 installed <86>Nov 8 01:44:25 groupadd[91056]: group added to /etc/group: name=tape, GID=499 <86>Nov 8 01:44:25 groupadd[91056]: group added to /etc/gshadow: name=tape <86>Nov 8 01:44:25 groupadd[91056]: new group: name=tape, GID=499 <86>Nov 8 01:44:25 groupadd[91078]: group added to /etc/group: name=dialout, GID=498 <86>Nov 8 01:44:25 groupadd[91078]: group added to /etc/gshadow: name=dialout <86>Nov 8 01:44:25 groupadd[91078]: new group: name=dialout, GID=498 <86>Nov 8 01:44:25 groupadd[91083]: group added to /etc/group: name=input, GID=497 <86>Nov 8 01:44:25 groupadd[91083]: group added to /etc/gshadow: name=input <86>Nov 8 01:44:25 groupadd[91083]: new group: name=input, GID=497 <86>Nov 8 01:44:25 groupadd[91114]: group added to /etc/group: name=video, GID=496 <86>Nov 8 01:44:25 groupadd[91114]: group added to /etc/gshadow: name=video <86>Nov 8 01:44:25 groupadd[91114]: new group: name=video, GID=496 <86>Nov 8 01:44:25 groupadd[91136]: group added to /etc/group: name=render, GID=495 <86>Nov 8 01:44:25 groupadd[91136]: group added to /etc/gshadow: name=render <86>Nov 8 01:44:25 groupadd[91136]: new group: name=render, GID=495 <13>Nov 8 01:44:25 rpmi: udev-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 8 01:44:25 rpmi: libtasn1-4.13-alt2 1521133848 installed <13>Nov 8 01:44:25 rpmi: libp11-kit-0.23.9-alt5 1525798241 installed <13>Nov 8 01:44:25 rpmi: bc-1:1.06-alt4 1461014962 installed <13>Nov 8 01:44:25 rpmi: rpm-macros-alternatives-0.4.5-alt1.1 1404382149 installed <13>Nov 8 01:44:25 rpmi: alternatives-0.4.5-alt1.1 1404382149 installed <13>Nov 8 01:44:25 rpmi: libhdf5-8-mpi-1.8.13-alt4 1533048416 installed <13>Nov 8 01:44:25 rpmi: ca-certificates-2018.09.09-alt1 sisyphus.212781.100 1536518628 installed <13>Nov 8 01:44:25 rpmi: ca-trust-0.1.1-alt2 1515595785 installed <13>Nov 8 01:44:25 rpmi: p11-kit-trust-0.23.9-alt5 1525798241 installed <13>Nov 8 01:44:25 rpmi: libcrypto1.1-1.1.0i-alt1 1535471288 installed <13>Nov 8 01:44:25 rpmi: libssl1.1-1.1.0i-alt1 1535471288 installed <86>Nov 8 01:44:25 groupadd[92055]: group added to /etc/group: name=_keytab, GID=494 <86>Nov 8 01:44:25 groupadd[92055]: group added to /etc/gshadow: name=_keytab <86>Nov 8 01:44:25 groupadd[92055]: new group: name=_keytab, GID=494 <13>Nov 8 01:44:25 rpmi: libkrb5-1.16.2-alt1 sisyphus.216047.100 1541159108 installed <13>Nov 8 01:44:25 rpmi: libcurl-7.62.0-alt2 sisyphus.215995.100 1541066189 installed <13>Nov 8 01:44:25 rpmi: libnetcdf11-mpi-4.4.1.1-alt2 1505818983 installed <86>Nov 8 01:44:25 groupadd[92242]: group added to /etc/group: name=iputils, GID=493 <86>Nov 8 01:44:25 groupadd[92242]: group added to /etc/gshadow: name=iputils <86>Nov 8 01:44:25 groupadd[92242]: new group: name=iputils, GID=493 <86>Nov 8 01:44:25 useradd[92259]: new user: name=iputils, UID=499, GID=493, home=/dev/null, shell=/dev/null <86>Nov 8 01:44:25 groupadd[92274]: group added to /etc/group: name=netadmin, GID=492 <86>Nov 8 01:44:25 groupadd[92274]: group added to /etc/gshadow: name=netadmin <86>Nov 8 01:44:25 groupadd[92274]: new group: name=netadmin, GID=492 <13>Nov 8 01:44:25 rpmi: iputils-20180629-alt1 1535650705 installed sysctl: cannot stat /proc/sys/net/ipv4/ping_group_range: No such file or directory <13>Nov 8 01:44:25 rpmi: iproute2-4.18.0-alt1 1534194780 installed <13>Nov 8 01:44:25 rpmi: rdma-core-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 8 01:44:25 rpmi: ibacm-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 8 01:44:25 rpmi: rdma-core-devel-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 8 01:44:26 rpmi: openmpi-devel-2.0.1-alt6 1530784288 installed <13>Nov 8 01:44:26 rpmi: libhdf5-mpi-devel-1.8.13-alt4 1533048416 installed <13>Nov 8 01:44:26 rpmi: libnetcdf-mpi-devel-4.4.1.1-alt2 1505818983 installed <13>Nov 8 01:44:26 rpmi: libcurl-devel-7.62.0-alt2 sisyphus.215995.100 1541066189 installed <13>Nov 8 01:44:26 rpmi: libexpat-devel-2.2.4-alt1 1503305341 installed <13>Nov 8 01:44:26 rpmi: flex-2.6.0-alt1 1449073214 installed Building target platforms: x86_64 Building for target x86_64 Wrote: /usr/src/in/nosrpm/libnetcdf_c++4-1-mpi-4.3.0-alt1.nosrc.rpm Installing libnetcdf_c++4-1-mpi-4.3.0-alt1.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.97848 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf libnetcdf_c++4-1-mpi-4.3.0 + echo 'Source #0 (libnetcdf_c++4-1-mpi-4.3.0.tar):' Source #0 (libnetcdf_c++4-1-mpi-4.3.0.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/libnetcdf_c++4-1-mpi-4.3.0.tar + cd libnetcdf_c++4-1-mpi-4.3.0 + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #1 (netcdf-cxx4-4.3.0-alt-build.patch):' Patch #1 (netcdf-cxx4-4.3.0-alt-build.patch): + /usr/bin/patch -p2 patching file ncxx4-config.in Hunk #1 succeeded at 3 with fuzz 2. Hunk #2 succeeded at 11 with fuzz 2. patching file netcdf-cxx4.pc.in + sed -i 's|@LIBDIR@|/usr/lib64|' netcdf-cxx4.pc.in ncxx4-config.in + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.8055 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdf_c++4-1-mpi-4.3.0 + mpi-selector --set openmpi + source /usr/lib64/openmpi/bin/mpivars.sh ++ grep -q /usr/lib64/openmpi/bin ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ PATH=/usr/lib64/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib64/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib64/openmpi/man ++ MANPATH=/usr/lib64/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + autoreconf -fisv autoreconf-default: Entering directory `.' autoreconf-default: configure.ac: not using Gettext autoreconf-default: running: aclocal --force -I m4 autoreconf-default: configure.ac: tracing autoreconf-default: running: libtoolize --force --install libtoolize-default: putting auxiliary files in `.'. libtoolize-default: linking file `./config.guess' libtoolize-default: linking file `./config.sub' libtoolize-default: linking file `./install-sh' libtoolize-default: linking file `./ltmain.sh' libtoolize-default: putting macros in AC_CONFIG_MACRO_DIR, `m4'. libtoolize-default: linking file `m4/libtool.m4' libtoolize-default: linking file `m4/ltoptions.m4' libtoolize-default: linking file `m4/ltsugar.m4' libtoolize-default: linking file `m4/ltversion.m4' libtoolize-default: linking file `m4/lt~obsolete.m4' autoreconf-default: configure.ac: not using Intltool autoreconf-default: configure.ac: not using gtk-doc autoreconf-default: running: /usr/bin/autoconf-2.60 --force autoreconf-default: running: /usr/bin/autoheader-2.60 --force autoreconf-default: running: automake --add-missing --force-missing autoreconf-default: Leaving directory `.' + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export FFLAGS + '[' -n '' ']' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' ++ printf %s '-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + ASFLAGS= + export ASFLAGS + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + xargs -ri dirname -- '{}' + ./configure --build=x86_64-alt-linux --host=x86_64-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --without-included-gettext --enable-shared --enable-static=no --bindir=/usr/lib64/openmpi/bin --libdir=/usr/lib64/openmpi/lib --includedir=/usr/lib64/openmpi/include configure: WARNING: unrecognized options: --without-included-gettext configure: netCDF-cxx4 4.3.0 checking build system type... x86_64-alt-linux-gnu checking host system type... x86_64-alt-linux-gnu checking target system type... x86_64-alt-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether netCDF extra tests should be run (developers only)... no checking whether large file (> 2GB) tests should be run... no checking whether benchmaks should be run (experimental)... no checking where to put large temp files if large file tests are run... . checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... no configure: WARNING: dot not found - will use simple charts in documentation configure: finding other utilities configure: setting up libtool checking how to print strings... printf checking for style of include used by make... GNU checking for x86_64-alt-linux-gcc... x86_64-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-alt-linux-gcc accepts -g... yes checking for x86_64-alt-linux-gcc option to accept ISO C89... none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... yes checking dependency style of x86_64-alt-linux-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-alt-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-alt-linux-gnu file names to x86_64-alt-linux-gnu format... func_convert_file_noop checking how to convert x86_64-alt-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-alt-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... (cached) pass_all checking for x86_64-alt-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-alt-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-alt-linux-strip... no checking for strip... strip checking for x86_64-alt-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from x86_64-alt-linux-gcc object... ok checking for sysroot... no checking for x86_64-alt-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-alt-linux-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-alt-linux-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-alt-linux-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-alt-linux-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-alt-linux-gcc static flag -static works... no checking if x86_64-alt-linux-gcc supports -c -o file.o... yes checking if x86_64-alt-linux-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-alt-linux-g++... x86_64-alt-linux-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-alt-linux-g++ accepts -g... yes checking dependency style of x86_64-alt-linux-g++... none checking how to run the C++ preprocessor... x86_64-alt-linux-g++ -E checking for ld used by x86_64-alt-linux-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-alt-linux-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-alt-linux-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-alt-linux-g++ static flag -static works... no checking if x86_64-alt-linux-g++ supports -c -o file.o... yes checking if x86_64-alt-linux-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for x86_64-alt-linux-gcc... (cached) x86_64-alt-linux-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-alt-linux-gcc accepts -g... (cached) yes checking for x86_64-alt-linux-gcc option to accept ISO C89... (cached) none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... (cached) yes checking dependency style of x86_64-alt-linux-gcc... (cached) none checking how to run the C preprocessor... x86_64-alt-linux-gcc -E checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking for ptrdiff_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking netcdf.h usability... yes checking netcdf.h presence... no configure: WARNING: netcdf.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: netcdf.h: proceeding with the compiler's result checking for netcdf.h... yes checking for library containing nc_create... -lnetcdf checking for nc_def_opaque... yes checking for nccreate... yes checking for nc_set_log_level... no checking for oc_open... yes checking for nc_use_parallel_enabled... yes checking netCDF v2 API present... yes checking netCDF-4 present... yes configure: generating header files and makefiles checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating cxx4/Makefile config.status: creating examples/Makefile config.status: creating docs/Makefile config.status: creating ncxx4-config config.status: creating netcdf-cxx4.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --without-included-gettext + make -j8 make all-recursive Making all in cxx4 make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncDim.lo ncDim.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncDim.cpp -fPIC -DPIC -o .libs/ncDim.o In file included from ncDim.cpp:2:0: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncEnumType.lo ncEnumType.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncEnumType.cpp -fPIC -DPIC -o .libs/ncEnumType.o In file included from ncEnumType.cpp:2:0: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncFile.lo ncFile.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncFile.cpp -fPIC -DPIC -o .libs/ncFile.o In file included from ncFile.h:2:0, from ncFile.cpp:1: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ ncFile.cpp: In member function 'void netCDF::NcFile::open(const string&, netCDF::NcFile::FileMode, netCDF::NcFile::FileFormat)': ncFile.cpp:108:14: warning: 'format' may be used uninitialized in this function [-Wmaybe-uninitialized] ncCheck(nc_open(filePath.c_str(), format | NC_WRITE, &myId),__FILE__,__LINE__); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncCompoundType.lo ncCompoundType.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncCompoundType.cpp -fPIC -DPIC -o .libs/ncCompoundType.o In file included from ncCompoundType.cpp:1:0: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncAtt.lo ncAtt.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncAtt.cpp -fPIC -DPIC -o .libs/ncAtt.o In file included from ncAtt.cpp:2:0: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncCheck.lo ncCheck.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncCheck.cpp -fPIC -DPIC -o .libs/ncCheck.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncGroupAtt.lo ncGroupAtt.cpp libtool: 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-fno-strict-aliasing -fPIC -DPIC -c ncException.cpp -fPIC -DPIC -o .libs/ncException.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncOpaqueType.lo ncOpaqueType.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncOpaqueType.cpp -fPIC -DPIC -o .libs/ncOpaqueType.o In file included from ncOpaqueType.cpp:2:0: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncType.lo ncType.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncType.cpp -fPIC -DPIC -o .libs/ncType.o In file included from ncType.cpp:3:0: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncByte.lo ncByte.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncByte.cpp -fPIC -DPIC -o .libs/ncByte.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncVarAtt.lo ncVarAtt.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 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directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncVlenType.lo ncVlenType.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncVlenType.cpp -fPIC -DPIC -o .libs/ncVlenType.o In file included from ncVlenType.cpp:2:0: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool 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-frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncUbyte.cpp -fPIC -DPIC -o .libs/ncUbyte.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncUint.lo ncUint.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncUint.cpp -fPIC -DPIC -o .libs/ncUint.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncString.lo ncString.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncString.cpp -fPIC -DPIC -o .libs/ncString.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncUint64.lo ncUint64.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncUint64.cpp -fPIC -DPIC -o .libs/ncUint64.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncUshort.lo ncUshort.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncUshort.cpp -fPIC -DPIC -o .libs/ncUshort.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncInt64.lo ncInt64.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncInt64.cpp -fPIC -DPIC -o .libs/ncInt64.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncVar.lo ncVar.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncVar.cpp -fPIC -DPIC -o .libs/ncVar.o In file included from ncVar.h:8:0, from ncVar.cpp:3: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncGroup.lo ncGroup.cpp libtool: compile: x86_64-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncGroup.cpp -fPIC -DPIC -o .libs/ncGroup.o In file included from ncGroup.cpp:1:0: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] static int file_id; ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=link x86_64-alt-linux-g++ -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -version-info 1:3:0 -o libnetcdf_c++4.la -rpath /usr/lib64/openmpi/lib ncAtt.lo ncCheck.lo ncCompoundType.lo ncDim.lo ncEnumType.lo ncException.lo ncFile.lo ncGroup.lo ncGroupAtt.lo ncOpaqueType.lo ncType.lo ncVar.lo ncVarAtt.lo ncVlenType.lo ncByte.lo ncChar.lo ncShort.lo ncInt.lo ncFloat.lo ncDouble.lo ncUbyte.lo ncUshort.lo ncUint.lo ncInt64.lo ncUint64.lo ncString.lo -lnetcdf libtool: link: x86_64-alt-linux-g++ -fPIC -DPIC -shared -nostdlib /usr/lib64/gcc/x86_64-alt-linux/7/../../../../lib64/crti.o /usr/lib64/gcc/x86_64-alt-linux/7/crtbeginS.o .libs/ncAtt.o .libs/ncCheck.o .libs/ncCompoundType.o .libs/ncDim.o .libs/ncEnumType.o .libs/ncException.o .libs/ncFile.o .libs/ncGroup.o .libs/ncGroupAtt.o .libs/ncOpaqueType.o .libs/ncType.o .libs/ncVar.o .libs/ncVarAtt.o .libs/ncVlenType.o .libs/ncByte.o .libs/ncChar.o .libs/ncShort.o .libs/ncInt.o .libs/ncFloat.o .libs/ncDouble.o .libs/ncUbyte.o .libs/ncUshort.o .libs/ncUint.o .libs/ncInt64.o .libs/ncUint64.o .libs/ncString.o -lnetcdf -L/usr/lib64/gcc/x86_64-alt-linux/7 -L/usr/lib64/gcc/x86_64-alt-linux/7/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-alt-linux/7/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib64/gcc/x86_64-alt-linux/7/crtendS.o /usr/lib64/gcc/x86_64-alt-linux/7/../../../../lib64/crtn.o -O2 -Wl,-soname -Wl,libnetcdf_c++4.so.1 -o .libs/libnetcdf_c++4.so.1.0.3 libtool: link: (cd ".libs" && rm -f "libnetcdf_c++4.so.1" && ln -s "libnetcdf_c++4.so.1.0.3" "libnetcdf_c++4.so.1") libtool: link: (cd ".libs" && rm -f "libnetcdf_c++4.so" && ln -s "libnetcdf_c++4.so.1.0.3" "libnetcdf_c++4.so") libtool: link: ( cd ".libs" && rm -f "libnetcdf_c++4.la" && ln -s "../libnetcdf_c++4.la" "libnetcdf_c++4.la" ) make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' Making all in examples make[2]: Nothing to be done for 'all'. Making all in docs make[2]: Nothing to be done for 'all'. + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.88264 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot + : + /bin/rm -rf -- /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot + cd libnetcdf_c++4-1-mpi-4.3.0 + source /usr/lib64/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib64/openmpi/bin ++ PATH=/usr/lib64/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib64/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ grep -q /usr/lib64/openmpi/man ++ echo ++ MANPATH=/usr/lib64/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot make: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' Making install in cxx4 make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/mkdir -p '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib' /bin/sh ../libtool --mode=install /bin/install -p libnetcdf_c++4.la '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib' libtool: install: /bin/install -p .libs/libnetcdf_c++4.so.1.0.3 /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdf_c++4.so.1.0.3 libtool: install: (cd /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib && { ln -s -f libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so.1 || { rm -f libnetcdf_c++4.so.1 && ln -s libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so.1; }; }) libtool: install: (cd /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib && { ln -s -f libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so || { rm -f libnetcdf_c++4.so && ln -s libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so; }; }) libtool: install: /bin/install -p .libs/libnetcdf_c++4.lai /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdf_c++4.la libtool: install: warning: remember to run `libtool --finish /usr/lib64/openmpi/lib' /bin/mkdir -p '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include' /bin/install -p -m 644 netcdf ncAtt.h ncCheck.h ncDim.h ncException.h ncGroup.h ncOpaqueType.h ncVar.h ncVlenType.h ncCompoundType.h ncEnumType.h ncFile.h ncGroupAtt.h ncType.h ncVarAtt.h ncByte.h ncChar.h ncShort.h ncInt.h ncFloat.h ncDouble.h ncUbyte.h ncUshort.h ncUint.h ncInt64.h ncUint64.h ncString.h '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' Making install in examples make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/examples' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/examples' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/examples' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/examples' Making install in docs make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/docs' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/docs' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/docs' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/docs' make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' /bin/mkdir -p '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/bin' /bin/install -p ncxx4-config '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/bin' /bin/mkdir -p '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib/pkgconfig' /bin/install -p -m 644 netcdf-cxx4.pc '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib/pkgconfig' make install-data-hook make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' +-------------------------------------------------------------+ | Congratulations! You have successfully installed the | | new netCDF-4 C++ Library | | | | CAUTION: | | | | If you have not already run "make check", then we strongly | | recommend you do so. It does not take very long. | | | | Before using netCDF to store important data, test your | | build with "make check". | | | | If any tests fail, please see the netCDF web site: | | http://www.unidata.ucar.edu/software/netcdf/ | | | | NetCDF is developed and maintained at the Unidata Program | | Center. Unidata provides a broad array of data and software | | tools for use in geoscience education and research. | | http://www.unidata.ucar.edu | +-------------------------------------------------------------+ make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' make: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' + mv /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf.tmp + install -d /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf + mv /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncAtt.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncByte.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncChar.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncCheck.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncCompoundType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncDim.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncDouble.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncEnumType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncException.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncFile.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncFloat.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncGroup.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncGroupAtt.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncInt.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncInt64.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncOpaqueType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncShort.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncString.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncUbyte.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncUint.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncUint64.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncUshort.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncVar.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncVarAtt.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/ncVlenType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf.tmp /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf/ + mv /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf/netcdf.tmp /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf/netcdf + rm -f /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdf_c++4.la + install -d /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/etc/alternatives/packages.d + mkdir -p /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64 + pushd /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib ~/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/lib ~/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0 + for i in 'libnetcdf_c++4.so.*' + ln -s ../../usr/lib64/openmpi/lib/libnetcdf_c++4.so.1 /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/ + echo '/usr/lib64/libnetcdf_c++4.so.1 /usr/lib64/openmpi/lib/libnetcdf_c++4.so.1 30' + for i in 'libnetcdf_c++4.so.*' + ln -s ../../usr/lib64/openmpi/lib/libnetcdf_c++4.so.1.0.3 /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/ + echo '/usr/lib64/libnetcdf_c++4.so.1.0.3 /usr/lib64/openmpi/lib/libnetcdf_c++4.so.1.0.3 30' ++ ls libnetcdf_c++4.so + for i in '$(ls *.so)' + echo '/usr/lib64/libnetcdf_c++4.so /usr/lib64/openmpi/lib/libnetcdf_c++4.so 30' + echo '/usr/bin/ncxx4-config /usr/lib64/openmpi/bin/ncxx4-config 30' + echo '/usr/lib64/pkgconfig/netcdf-cxx4.pc /usr/lib64/openmpi/lib/pkgconfig/netcdf-cxx4.pc 30' + popd ~/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0 + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot (auto) mode of './usr/lib64/openmpi/lib/libnetcdf_c++4.so.1.0.3' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot (binconfig,pkgconfig,libtool,desktop) Checking contents of files in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/ (default) Compressing files in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot (auto) Adjusting library links in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot ./usr/lib64: ./usr/lib64/openmpi/lib: libnetcdf_c++4.so.1 -> libnetcdf_c++4.so.1.0.3 Verifying ELF objects in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Hardlinking identical .pyc and .pyo files Processing files: libnetcdf_c++4-1-mpi-4.3.0-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.19922 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdf_c++4-1-mpi-4.3.0 + DOCDIR=/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + export DOCDIR + rm -rf /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + /bin/mkdir -p /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + cp -prL COPYRIGHT /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + chmod -R go-w /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + chmod -R a+rX /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.SRUOqL find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.q7guGg find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Provides: libnetcdf_c++4-mpi = 4.3.0-alt1, libnetcdf_c++4-1-mpi = 4.3.0-alt1, /usr/lib64/libnetcdf_c++4.so.1 = 30, /usr/lib64/libnetcdf_c++4.so.1.0.3 = 30, libnetcdf_c++4.so.1()(64bit) = set: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 Requires: libhdf5-8-mpi, libnetcdf11-mpi, /etc/alternatives/packages.d, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.4)(64bit), libgcc_s.so.1(GCC_3.0)(64bit), libnetcdf.so.11()(64bit) >= set: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, libstdc++.so.6(CXXABI_1.3)(64bit), libstdc++.so.6(CXXABI_1.3.9)(64bit), libstdc++.so.6(GLIBCXX_3.4)(64bit), libstdc++.so.6(GLIBCXX_3.4.21)(64bit), rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Requires(post): alternatives Requires(preun): alternatives Conflicts: libnetcdf_c++4 < 4.0.1-alt6, libnetcdf_c++4-1-mpi < 4.3.0-alt1 Obsoletes: libnetcdf_c++4-1-mpi < 4.3.0-alt1 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.UwD58U Creating libnetcdf_c++4-1-mpi-debuginfo package Processing files: libnetcdf_c++4-mpi-devel-4.3.0-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.8646 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdf_c++4-1-mpi-4.3.0 + DOCDIR=/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + export DOCDIR + rm -rf /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + /bin/mkdir -p /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + cp -prL examples /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + chmod -R go-w /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + chmod -R a+rX /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.oy51rE find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.ocbjrr find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) In file included from /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf/ncAtt.h:1:0: /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf/ncType.h:1:10: fatal error: string: No such file or directory #include ^~~~~~~~ compilation terminated. cpp.req: /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib64/openmpi/include/netcdf/ncAtt.h: cpp failed, trying c++ mode find-requires: FINDPACKAGE-COMMANDS: cat Provides: /usr/bin/ncxx4-config = 30, /usr/lib64/libnetcdf_c++4.so = 30, /usr/lib64/pkgconfig/netcdf-cxx4.pc = 30 Requires: libnetcdf_c++4-1-mpi = 4.3.0-alt1, libnetcdf-mpi-devel, /bin/sh, /etc/alternatives/packages.d, /usr/lib64/openmpi/lib/libnetcdf_c++4.so.1.0.3, coreutils Requires(post): alternatives Requires(preun): alternatives Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.MI2Nqn Processing files: libnetcdf_c++4-1-mpi-debuginfo-4.3.0-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.4Jjz0m find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.cUxq6p find-requires: running scripts (debuginfo) Provides: debug64(libnetcdf_c++4.so.1) Requires: libnetcdf_c++4-1-mpi = 4.3.0-alt1, debug64(libc.so.6), debug64(libgcc_s.so.1), debug64(libnetcdf.so.11), debug64(libstdc++.so.6) Removing 1 extra deps from libnetcdf_c++4-mpi-devel due to dependency on libnetcdf_c++4-1-mpi Removing 2 extra deps from libnetcdf_c++4-mpi-devel due to repentancy on libnetcdf_c++4-1-mpi Wrote: /usr/src/RPM/RPMS/x86_64/libnetcdf_c++4-1-mpi-4.3.0-alt1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libnetcdf_c++4-mpi-devel-4.3.0-alt1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libnetcdf_c++4-1-mpi-debuginfo-4.3.0-alt1.x86_64.rpm 26.79user 3.25system 0:48.56elapsed 61%CPU (0avgtext+0avgdata 217440maxresident)k 0inputs+0outputs (0major+1746111minor)pagefaults 0swaps 40.35user 5.86system 1:15.49elapsed 61%CPU (0avgtext+0avgdata 217440maxresident)k 5072inputs+0outputs (0major+2337259minor)pagefaults 0swaps --- libnetcdf_c++4-1-mpi-4.3.0-alt1.x86_64.rpm.repo 2017-08-29 12:14:50.000000000 +0000 +++ libnetcdf_c++4-1-mpi-4.3.0-alt1.x86_64.rpm.hasher 2018-11-08 01:45:24.290684674 +0000 @@ -27,3 +27,3 @@ Provides: /usr/lib64/libnetcdf_c++4.so.1.0.3 = 30 -Provides: libnetcdf_c++4.so.1()(64bit) = set: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 +Provides: libnetcdf_c++4.so.1()(64bit) = set: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 Obsoletes: libnetcdf_c++4-1-mpi < 4.3.0-alt1