<86>Nov 5 02:57:38 userdel[53561]: delete user 'rooter' <86>Nov 5 02:57:38 groupadd[53578]: group added to /etc/group: name=rooter, GID=582 <86>Nov 5 02:57:38 groupadd[53578]: group added to /etc/gshadow: name=rooter <86>Nov 5 02:57:38 groupadd[53578]: new group: name=rooter, GID=582 <86>Nov 5 02:57:38 useradd[53594]: new user: name=rooter, UID=582, GID=582, home=/root, shell=/bin/bash <86>Nov 5 02:57:38 userdel[53615]: delete user 'builder' <86>Nov 5 02:57:38 userdel[53615]: removed group 'builder' owned by 'builder' <86>Nov 5 02:57:38 groupadd[53635]: group added to /etc/group: name=builder, GID=583 <86>Nov 5 02:57:38 groupadd[53635]: new group: name=builder, GID=583 <86>Nov 5 02:57:38 useradd[53646]: new user: name=builder, UID=583, GID=583, home=/usr/src, shell=/bin/bash warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found <13>Nov 5 02:57:42 rpmi: libidn2-2.0.5-alt1 1526923871 installed <13>Nov 5 02:57:42 rpmi: libquadmath0-7.3.1-alt5 1531512602 installed <13>Nov 5 02:57:42 rpmi: udev-rules-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 5 02:57:42 rpmi: libkmod-25-alt1 1522318405 installed <13>Nov 5 02:57:42 rpmi: kmod-25-alt1 1522318405 installed <13>Nov 5 02:57:43 rpmi: libgfortran4-7.3.1-alt5 1531512602 installed <13>Nov 5 02:57:43 rpmi: libnuma-2.0.11-alt1 1450022595 installed <13>Nov 5 02:57:43 rpmi: libmnl-1.0.4-alt1 1480571789 installed <13>Nov 5 02:57:43 rpmi: liblz4-1:1.8.3-alt1 sisyphus.213737.100 1538009646 installed <13>Nov 5 02:57:43 rpmi: libiptables-1.4.21-alt3 1435789456 installed <13>Nov 5 02:57:43 rpmi: msulogin-1.0-alt1 1366288481 installed <13>Nov 5 02:57:43 rpmi: mount-2.32-alt2 1528296098 installed <13>Nov 5 02:57:43 rpmi: libdevmapper-1.02.150-alt1 1534113654 installed <13>Nov 5 02:57:43 rpmi: sysvinit-2.88-alt5 1424350685 installed <13>Nov 5 02:57:43 rpmi: libnetlink-4.18.0-alt1 1534194780 installed <13>Nov 5 02:57:43 rpmi: libnuma-devel-2.0.11-alt1 1450022595 installed <13>Nov 5 02:57:43 rpmi: libquadmath7-devel-7.3.1-alt5 1531512602 installed <13>Nov 5 02:57:43 rpmi: libgfortran3-6.3.1-alt3.1 sisyphus.213581.600 1538069106 installed <13>Nov 5 02:57:43 rpmi: zlib-devel-1.2.8-alt1 1371079009 installed <13>Nov 5 02:57:43 rpmi: libibumad-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 5 02:57:43 rpmi: libpci-3.6.2-alt1.S1 sisyphus.213446.100 1537513663 installed <13>Nov 5 02:57:43 rpmi: pciids-20181029-alt1 sisyphus.215794.100 1540856372 installed <13>Nov 5 02:57:43 rpmi: pciutils-3.6.2-alt1.S1 sisyphus.213446.100 1537513663 installed <13>Nov 5 02:57:43 rpmi: libsz2-2.1-alt4 1300649105 installed <13>Nov 5 02:57:43 rpmi: torque-4.2.1-alt1.qa2 1518435580 installed <13>Nov 5 02:57:43 rpmi: libtorque-4.2.1-alt1.qa2 1518435580 installed <13>Nov 5 02:57:43 rpmi: libnl3-3.4.0-alt2 1507570084 installed <13>Nov 5 02:57:43 rpmi: libibverbs-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 5 02:57:43 rpmi: librdmacm-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 5 02:57:43 rpmi: tcsh-6.20.00-alt2 1503603377 installed <13>Nov 5 02:57:43 rpmi: rpm-macros-mpi-selector-1.0.3-alt3 1504498675 installed <13>Nov 5 02:57:43 rpmi: mpi-selector-1.0.3-alt3 1504498675 installed <13>Nov 5 02:57:43 rpmi: openmpi-2.0.1-alt6 1530784288 installed <13>Nov 5 02:57:43 rpmi: libpnetcdf-1.8.1-alt1 1505818746 installed <13>Nov 5 02:57:43 rpmi: libexpat-2.2.4-alt1 1503305341 installed <13>Nov 5 02:57:43 rpmi: publicsuffix-list-dafsa-20180420-alt1 1524841687 installed <13>Nov 5 02:57:43 rpmi: libpsl-0.20.2-alt1 1524841807 installed <13>Nov 5 02:57:43 rpmi: libnghttp2-1.34.0-alt1 sisyphus.214524.100 1539249616 installed <13>Nov 5 02:57:43 rpmi: libverto-0.3.0-alt1_5 1525957716 installed <13>Nov 5 02:57:43 rpmi: libkeyutils-1.5.10-alt1 1489994069 installed <13>Nov 5 02:57:43 rpmi: libcom_err-1.44.3-alt1 1532134713 installed <13>Nov 5 02:57:43 rpmi: libatm-2.5.1-alt4 1349943442 installed <13>Nov 5 02:57:43 rpmi: chrooted-0.3.9-alt1 1524554183 installed <13>Nov 5 02:57:43 rpmi: chrooted-resolv-0.3.1-alt2 1176155257 installed <13>Nov 5 02:57:44 rpmi: gcc-fortran-common-1.4.22-alt1 1519183788 installed <13>Nov 5 02:57:44 rpmi: libgfortran7-devel-7.3.1-alt5 1531512602 installed <13>Nov 5 02:57:44 rpmi: gcc7-fortran-7.3.1-alt5 1531512602 installed <13>Nov 5 02:57:44 rpmi: gcc-fortran-7-alt6 1528289185 installed <13>Nov 5 02:57:44 rpmi: gcc-c++-common-1.4.22-alt1 1519183788 installed <13>Nov 5 02:57:45 rpmi: libstdc++7-devel-7.3.1-alt5 1531512602 installed <13>Nov 5 02:57:46 rpmi: gcc7-c++-7.3.1-alt5 1531512602 installed <13>Nov 5 02:57:46 rpmi: gcc-c++-7-alt6 1528289185 installed <13>Nov 5 02:57:46 rpmi: libseccomp-2.3.3-alt1.S1.1 1525141482 installed <13>Nov 5 02:57:46 rpmi: libpcre2-10.32-alt1 sisyphus.212994.100 1536866755 installed <13>Nov 5 02:57:46 rpmi: libjson-c-0.12.1-alt2 1517446108 installed <13>Nov 5 02:57:46 rpmi: libargon2-20171227-alt1 1517446172 installed <13>Nov 5 02:57:46 rpmi: libgpg-error-1.31-alt1.S1 1529015796 installed <13>Nov 5 02:57:46 rpmi: libgcrypt20-1.8.3-alt3 sisyphus.214019.140 1538990261 installed <13>Nov 5 02:57:46 rpmi: libsystemd-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 5 02:57:46 rpmi: libcryptsetup-2.0.2-alt1 1522279986 installed <13>Nov 5 02:57:46 rpmi: hwclock-1:2.32-alt2 1528296098 installed <13>Nov 5 02:57:46 rpmi: startup-0.9.9.5-alt1.2 1397832469 installed <13>Nov 5 02:57:46 rpmi: systemd-utils-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 5 02:57:46 rpmi: udev-hwdb-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 5 02:57:46 rpmi: hashalot-0.3-alt1.qa1 1366323553 installed <13>Nov 5 02:57:46 rpmi: losetup-2.32-alt2 1528296098 installed <13>Nov 5 02:57:46 rpmi: lsblk-2.32-alt2 1528296098 installed <13>Nov 5 02:57:46 rpmi: dmsetup-1.02.150-alt1 1534113654 installed <86>Nov 5 02:57:46 groupadd[86383]: group added to /etc/group: name=tape, GID=499 <86>Nov 5 02:57:46 groupadd[86383]: group added to /etc/gshadow: name=tape <86>Nov 5 02:57:46 groupadd[86383]: new group: name=tape, GID=499 <86>Nov 5 02:57:46 groupadd[86404]: group added to /etc/group: name=dialout, GID=498 <86>Nov 5 02:57:46 groupadd[86404]: group added to /etc/gshadow: name=dialout <86>Nov 5 02:57:46 groupadd[86404]: new group: name=dialout, GID=498 <86>Nov 5 02:57:46 groupadd[86429]: group added to /etc/group: name=input, GID=497 <86>Nov 5 02:57:46 groupadd[86429]: group added to /etc/gshadow: name=input <86>Nov 5 02:57:46 groupadd[86429]: new group: name=input, GID=497 <86>Nov 5 02:57:46 groupadd[86452]: group added to /etc/group: name=video, GID=496 <86>Nov 5 02:57:46 groupadd[86452]: group added to /etc/gshadow: name=video <86>Nov 5 02:57:46 groupadd[86452]: new group: name=video, GID=496 <86>Nov 5 02:57:46 groupadd[86462]: group added to /etc/group: name=render, GID=495 <86>Nov 5 02:57:46 groupadd[86462]: group added to /etc/gshadow: name=render <86>Nov 5 02:57:46 groupadd[86462]: new group: name=render, GID=495 <13>Nov 5 02:57:46 rpmi: udev-1:239-alt3 sisyphus.215710.300 1540765573 installed <13>Nov 5 02:57:46 rpmi: libtasn1-4.13-alt2 1521133848 installed <13>Nov 5 02:57:46 rpmi: libp11-kit-0.23.9-alt5 1525798241 installed <13>Nov 5 02:57:46 rpmi: bc-1:1.06-alt4 1461014962 installed <13>Nov 5 02:57:46 rpmi: rpm-macros-alternatives-0.4.5-alt1.1 1404382149 installed <13>Nov 5 02:57:46 rpmi: alternatives-0.4.5-alt1.1 1404382149 installed <13>Nov 5 02:57:47 rpmi: libhdf5-8-mpi-1.8.13-alt4 1533048416 installed <13>Nov 5 02:57:47 rpmi: ca-certificates-2018.09.09-alt1 sisyphus.212781.100 1536518628 installed <13>Nov 5 02:57:47 rpmi: ca-trust-0.1.1-alt2 1515595785 installed <13>Nov 5 02:57:47 rpmi: p11-kit-trust-0.23.9-alt5 1525798241 installed <13>Nov 5 02:57:47 rpmi: libcrypto1.1-1.1.0i-alt1 1535471288 installed <13>Nov 5 02:57:47 rpmi: libssl1.1-1.1.0i-alt1 1535471288 installed <86>Nov 5 02:57:47 groupadd[87009]: group added to /etc/group: name=_keytab, GID=494 <86>Nov 5 02:57:47 groupadd[87009]: group added to /etc/gshadow: name=_keytab <86>Nov 5 02:57:47 groupadd[87009]: new group: name=_keytab, GID=494 <13>Nov 5 02:57:47 rpmi: libkrb5-1.16.2-alt1 sisyphus.216047.100 1541159108 installed <13>Nov 5 02:57:47 rpmi: libcurl-7.62.0-alt2 sisyphus.215995.100 1541066189 installed <13>Nov 5 02:57:47 rpmi: libnetcdf11-mpi-4.4.1.1-alt2 1505818983 installed <86>Nov 5 02:57:47 groupadd[87099]: group added to /etc/group: name=iputils, GID=493 <86>Nov 5 02:57:47 groupadd[87099]: group added to /etc/gshadow: name=iputils <86>Nov 5 02:57:47 groupadd[87099]: new group: name=iputils, GID=493 <86>Nov 5 02:57:47 useradd[87111]: new user: name=iputils, UID=499, GID=493, home=/dev/null, shell=/dev/null <86>Nov 5 02:57:47 groupadd[87128]: group added to /etc/group: name=netadmin, GID=492 <86>Nov 5 02:57:47 groupadd[87128]: group added to /etc/gshadow: name=netadmin <86>Nov 5 02:57:47 groupadd[87128]: new group: name=netadmin, GID=492 <13>Nov 5 02:57:47 rpmi: iputils-20180629-alt1 1535650705 installed sysctl: cannot stat /proc/sys/net/ipv4/ping_group_range: No such file or directory <13>Nov 5 02:57:47 rpmi: iproute2-4.18.0-alt1 1534194780 installed <13>Nov 5 02:57:47 rpmi: rdma-core-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 5 02:57:47 rpmi: ibacm-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 5 02:57:47 rpmi: rdma-core-devel-20.1-alt1 sisyphus.215851.40 1541165553 installed <13>Nov 5 02:57:47 rpmi: openmpi-devel-2.0.1-alt6 1530784288 installed <13>Nov 5 02:57:47 rpmi: libhdf5-mpi-devel-1.8.13-alt4 1533048416 installed <13>Nov 5 02:57:47 rpmi: libnetcdf-mpi-devel-4.4.1.1-alt2 1505818983 installed <13>Nov 5 02:57:47 rpmi: libcurl-devel-7.62.0-alt2 sisyphus.215995.100 1541066189 installed <13>Nov 5 02:57:47 rpmi: libexpat-devel-2.2.4-alt1 1503305341 installed <13>Nov 5 02:57:47 rpmi: flex-2.6.0-alt1 1449073214 installed Building target platforms: x86_64 Building for target x86_64 Wrote: /usr/src/in/nosrpm/libnetcdff6-mpi-4.4.4-alt1.nosrc.rpm Installing libnetcdff6-mpi-4.4.4-alt1.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.63917 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf libnetcdff6-mpi-4.4.4 + echo 'Source #0 (libnetcdff6-mpi-4.4.4.tar):' Source #0 (libnetcdff6-mpi-4.4.4.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/libnetcdff6-mpi-4.4.4.tar + cd libnetcdff6-mpi-4.4.4 + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #1 (netcdf-fortran-4.4.4-alt-build.patch):' Patch #1 (netcdf-fortran-4.4.4-alt-build.patch): + /usr/bin/patch -p1 patching file netcdf-fortran.pc.in patching file nf-config.in + sed -i 's|@MPIDIR@|/usr/lib64/openmpi|' netcdf-fortran.pc.in nf-config.in + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.63917 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdff6-mpi-4.4.4 + mpi-selector --set openmpi + source /usr/lib64/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib64/openmpi/bin ++ PATH=/usr/lib64/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib64/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib64/openmpi/man ++ MANPATH=/usr/lib64/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + autoreconf -fisv autoreconf-default: Entering directory `.' autoreconf-default: configure.ac: not using Gettext autoreconf-default: running: aclocal --force -I m4 autoreconf-default: configure.ac: tracing autoreconf-default: running: libtoolize --force --install libtoolize-default: putting auxiliary files in `.'. libtoolize-default: linking file `./config.guess' libtoolize-default: linking file `./config.sub' libtoolize-default: linking file `./install-sh' libtoolize-default: linking file `./ltmain.sh' libtoolize-default: putting macros in AC_CONFIG_MACRO_DIR, `m4'. libtoolize-default: linking file `m4/libtool.m4' libtoolize-default: linking file `m4/ltoptions.m4' libtoolize-default: linking file `m4/ltsugar.m4' libtoolize-default: linking file `m4/ltversion.m4' libtoolize-default: linking file `m4/lt~obsolete.m4' autoreconf-default: configure.ac: not using Intltool autoreconf-default: configure.ac: not using gtk-doc autoreconf-default: running: /usr/bin/autoconf-2.60 --force autoreconf-default: running: /usr/bin/autoheader-2.60 --force autoreconf-default: running: automake --add-missing --force-missing autoreconf-default: Leaving directory `.' + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export FFLAGS + '[' -n '' ']' ++ printf %s '-pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS= + export ASFLAGS + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + sort -u + ./configure --build=x86_64-alt-linux --host=x86_64-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --without-included-gettext --enable-shared --enable-static=no --bindir=/usr/lib64/openmpi/bin --libdir=/usr/lib64/openmpi/lib --includedir=/usr/lib64/openmpi/include configure: WARNING: unrecognized options: --without-included-gettext configure: netCDF-Fortran 4.4.4 checking build system type... x86_64-alt-linux-gnu checking host system type... x86_64-alt-linux-gnu checking target system type... x86_64-alt-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether extra valgrind tests should be run... no checking whether parallel IO tests should be run... no checking whether netCDF extra tests should be run (developers only)... no checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... no configure: WARNING: dot not found - will use simple charts in documentation configure: finding C compiler checking for x86_64-alt-linux-gcc... x86_64-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-alt-linux-gcc accepts -g... yes checking for x86_64-alt-linux-gcc option to accept ISO C89... none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of x86_64-alt-linux-gcc... none checking for an ANSI C-conforming const... yes configure: finding Fortran compiler checking for x86_64-alt-linux-gfortran... x86_64-alt-linux-gfortran checking whether we are using the GNU Fortran compiler... yes checking whether x86_64-alt-linux-gfortran accepts -g... yes checking for x86_64-alt-linux-x86_64-alt-linux-gfortran... no checking for x86_64-alt-linux-gfortran... x86_64-alt-linux-gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether x86_64-alt-linux-gfortran accepts -g... yes checking whether Fortran compiler is checked for ISO_C_BINDING support... yes checking for Fortran flag to compile .f90 files... none checking fortran 90 modules inclusion flag... -I checking if Fortran compiler supports Fortran 2003 ISO_C_BINDING... yes checking if Fortran compiler supports Fortran 2008 ISO_FORTRAN_ENV additions... yes checking if Fortran compiler supports TS29113 standard extension... yes checking whether F03 native code is desired... yes checking whether fortran type sizes should be checked... yes checking whether large file (> 2GB) tests should be run... no checking whether benchmarks should be run (experimental)... no checking where to put large temp files if large file tests are run... . configure: setting up libtool checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-alt-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-alt-linux-gnu file names to x86_64-alt-linux-gnu format... func_convert_file_noop checking how to convert x86_64-alt-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-alt-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... (cached) pass_all checking for x86_64-alt-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-alt-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-alt-linux-strip... no checking for strip... strip checking for x86_64-alt-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from x86_64-alt-linux-gcc object... ok checking for sysroot... no checking for x86_64-alt-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-alt-linux-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-alt-linux-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-alt-linux-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-alt-linux-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-alt-linux-gcc static flag -static works... no checking if x86_64-alt-linux-gcc supports -c -o file.o... yes checking if x86_64-alt-linux-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-alt-linux-gfortran option to produce PIC... -fPIC checking if x86_64-alt-linux-gfortran PIC flag -fPIC works... yes checking if x86_64-alt-linux-gfortran static flag -static works... no checking if x86_64-alt-linux-gfortran supports -c -o file.o... yes checking if x86_64-alt-linux-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-alt-linux-gfortran option to produce PIC... -fPIC checking if x86_64-alt-linux-gfortran PIC flag -fPIC works... yes checking if x86_64-alt-linux-gfortran static flag -static works... no checking if x86_64-alt-linux-gfortran supports -c -o file.o... yes checking if x86_64-alt-linux-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: finding other utilities configure: trying to set fortran flags for this platform checking what FC is set to... x86_64-alt-linux-gfortran checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for /usr/bin/nm... /usr/bin/nm -B checking nm flags... checking for C-equivalent to Fortran routine "SUB"... sub_ checking for Fortran "byte"... yes checking for Fortran "integer*2"... yes checking if Fortran "byte" is C "signed char"... yes checking if Fortran "byte" is C "short"... no checking if Fortran "byte" is C "int"... no checking if Fortran "byte" is C "long"... no checking if Fortran "integer*2" is C "short"... yes checking if Fortran "integer*2" is C "int"... no checking if Fortran "integer*2" is C "long"... no checking if Fortran "integer" is C "int"... yes checking if Fortran "real" is C "float"... yes checking if Fortran "doubleprecision" is C "double"... yes checking for Fortran-equivalent to netCDF "byte"... byte checking for Fortran-equivalent to netCDF "short"... integer*2 checking whether extra example tests should be run... no checking whether a win32 DLL is desired... no configure: checking types, headers, and functions checking netcdf.h usability... yes checking netcdf.h presence... no configure: WARNING: netcdf.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: netcdf.h: proceeding with the compiler's result checking for netcdf.h... yes checking for library containing nc_open... -lnetcdf checking for nc_def_opaque... yes checking for nccreate... yes checking for nc_set_log_level... no checking for oc_open... yes checking for nc_use_parallel_enabled... yes checking netCDF v2 API present... yes checking netCDF-4 present... yes checking for stdlib.h... (cached) yes checking for sys/types.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/stat.h... (cached) yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking whether time.h and sys/time.h may both be included... yes checking for vprintf... yes checking for _doprnt... no checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for size_t... (cached) yes checking for off_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking for uchar... no checking for longlong... no checking whether char is unsigned... no checking size of short... 2 checking size of int... 4 checking size of long... 8 checking size of float... 4 checking size of double... 8 checking size of off_t... 8 checking size of size_t... 8 checking size of ptrdiff_t... 8 configure: generating header files and makefiles checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating nf-config config.status: creating netcdf-fortran.pc config.status: creating docs/Makefile config.status: creating libsrc/Makefile config.status: creating fortran/Makefile config.status: creating nf_test/Makefile config.status: creating nf03_test/Makefile config.status: creating CMakeExtras/Makefile config.status: creating examples/Makefile config.status: creating examples/F90/Makefile config.status: creating examples/F77/Makefile config.status: creating config.h config.status: creating libsrc/nfconfig1.inc config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --without-included-gettext + make -j8 make all-recursive Making all in fortran make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nc_data.o module_netcdf_nc_data.F90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_nc_interfaces.o module_netcdf_nc_interfaces.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nf_data.o module_netcdf_nf_data.F90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nf_interfaces.o module_netcdf_nf_interfaces.F90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_f03.o module_netcdf_f03.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_fortv2_c_interfaces.o module_netcdf_fortv2_c_interfaces.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf4_nc_interfaces.o module_netcdf4_nc_interfaces.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf4_nf_interfaces.o module_netcdf4_nf_interfaces.F90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf4_f03.o module_netcdf4_f03.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o typeSizes.o typeSizes.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' x86_64-alt-linux-gfortran -g -O2 -c -o netcdf4.o netcdf4.f90 make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' echo '! NetCDF-3.' > netcdf.inc cat ../fortran/netcdf3.inc >> netcdf.inc echo >> netcdf.inc echo '! NetCDF-4.' >> netcdf.inc cat ../fortran/netcdf4.inc >> netcdf.inc echo >> netcdf.inc echo '! NetCDF-2.' >> netcdf.inc cat ../fortran/netcdf2.inc >> netcdf.inc make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make all-am make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o typeSizes.lo typeSizes.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c typeSizes.f90 -fPIC -o .libs/typeSizes.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nc_data.lo module_netcdf_nc_data.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c module_netcdf_nc_data.F90 -fPIC -o .libs/module_netcdf_nc_data.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_nc_interfaces.lo module_netcdf_nc_interfaces.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf_nc_interfaces.f90 -fPIC -o .libs/module_netcdf_nc_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nf_data.lo module_netcdf_nf_data.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c module_netcdf_nf_data.F90 -fPIC -o .libs/module_netcdf_nf_data.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf_nf_interfaces.lo module_netcdf_nf_interfaces.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c module_netcdf_nf_interfaces.F90 -fPIC -o .libs/module_netcdf_nf_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_f03.lo module_netcdf_f03.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf_f03.f90 -fPIC -o .libs/module_netcdf_f03.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_attio.lo nf_attio.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_attio.F90 -fPIC -o .libs/nf_attio.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_control.lo nf_control.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_control.F90 -fPIC -o .libs/nf_control.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_dim.lo nf_dim.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_dim.f90 -fPIC -o .libs/nf_dim.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_misc.lo nf_misc.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_misc.f90 -fPIC -o .libs/nf_misc.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_genatt.lo nf_genatt.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_genatt.f90 -fPIC -o .libs/nf_genatt.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_geninq.lo nf_geninq.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_geninq.f90 -fPIC -o .libs/nf_geninq.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_genvar.lo nf_genvar.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_genvar.f90 -fPIC -o .libs/nf_genvar.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_vario.lo nf_vario.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_vario.F90 -fPIC -o .libs/nf_vario.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_var1io.lo nf_var1io.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_var1io.F90 -fPIC -o .libs/nf_var1io.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_varaio.lo nf_varaio.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_varaio.F90 -fPIC -o .libs/nf_varaio.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_varmio.lo nf_varmio.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_varmio.F90 -fPIC -o .libs/nf_varmio.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o nf_varsio.lo nf_varsio.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c nf_varsio.F90 -fPIC -o .libs/nf_varsio.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf4_nc_interfaces.lo module_netcdf4_nc_interfaces.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf4_nc_interfaces.f90 -fPIC -o .libs/module_netcdf4_nc_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c -o module_netcdf4_nf_interfaces.lo module_netcdf4_nf_interfaces.F90 libtool: compile: x86_64-alt-linux-gfortran -DHAVE_CONFIG_H -I. -I.. -I../libsrc -g -O2 -c module_netcdf4_nf_interfaces.F90 -fPIC -o .libs/module_netcdf4_nf_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf4_f03.lo module_netcdf4_f03.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf4_f03.f90 -fPIC -o .libs/module_netcdf4_f03.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DLONGLONG_IS_LONG -c -o nf_lib.lo nf_lib.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DLONGLONG_IS_LONG -c nf_lib.c -fPIC -DPIC -o .libs/nf_lib.o nf_lib.c: In function 'nc_inq_compound_field_ndims': nf_lib.c:130:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if ((ret = nc_inq_compound_field(ncid, xtype, fieldid, NULL, NULL, ^~ nf_lib.c:133:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' return NC_NOERR; ^~~~~~ nf_lib.c: In function 'nc_inq_numgrps': nf_lib.c:177:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ nf_lib.c: In function 'nc_inq_numtypes': nf_lib.c:187:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_nc4.lo nf_nc4.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_nc4.f90 -fPIC -o .libs/nf_nc4.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o netcdf4.lo netcdf4.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c netcdf4.f90 -fPIC -o .libs/netcdf4.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DLONGLONG_IS_LONG -c -o nf_v2compat.lo nf_v2compat.c libtool: compile: x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../libsrc -pipe -frecord-gcc-switches -Wall -g -O2 -I/usr/lib64/openmpi/include -I/usr/lib64/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -DLONGLONG_IS_LONG -c nf_v2compat.c -fPIC -DPIC -o .libs/nf_v2compat.o nf_v2compat.c: In function 'c_ncapt': nf_v2compat.c:1554:8: warning: 'status' may be used uninitialized in this function [-Wmaybe-uninitialized] if (status == 0) ^ make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o module_netcdf_fortv2_c_interfaces.lo module_netcdf_fortv2_c_interfaces.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c module_netcdf_fortv2_c_interfaces.f90 -fPIC -o .libs/module_netcdf_fortv2_c_interfaces.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=compile x86_64-alt-linux-gfortran -g -O2 -c -o nf_fortv2.lo nf_fortv2.f90 libtool: compile: x86_64-alt-linux-gfortran -g -O2 -c nf_fortv2.f90 -fPIC -o .libs/nf_fortv2.o make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/sh ../libtool --tag=FC --mode=link x86_64-alt-linux-gfortran -g -O2 -version-number 6:1:1 -o libnetcdff.la -rpath /usr/lib64/openmpi/lib typeSizes.lo module_netcdf_nc_data.lo module_netcdf_nc_interfaces.lo module_netcdf_nf_data.lo module_netcdf_nf_interfaces.lo module_netcdf_f03.lo nf_attio.lo nf_control.lo nf_dim.lo nf_misc.lo nf_genatt.lo nf_geninq.lo nf_genvar.lo nf_vario.lo nf_var1io.lo nf_varaio.lo nf_varmio.lo nf_varsio.lo module_netcdf4_nc_interfaces.lo module_netcdf4_nf_interfaces.lo module_netcdf4_f03.lo nf_lib.lo nf_nc4.lo netcdf4.lo nf_v2compat.lo module_netcdf_fortv2_c_interfaces.lo nf_fortv2.lo -lnetcdf libtool: link: x86_64-alt-linux-gfortran -shared -fPIC .libs/typeSizes.o .libs/module_netcdf_nc_data.o .libs/module_netcdf_nc_interfaces.o .libs/module_netcdf_nf_data.o .libs/module_netcdf_nf_interfaces.o .libs/module_netcdf_f03.o .libs/nf_attio.o .libs/nf_control.o .libs/nf_dim.o .libs/nf_misc.o .libs/nf_genatt.o .libs/nf_geninq.o .libs/nf_genvar.o .libs/nf_vario.o .libs/nf_var1io.o .libs/nf_varaio.o .libs/nf_varmio.o .libs/nf_varsio.o .libs/module_netcdf4_nc_interfaces.o .libs/module_netcdf4_nf_interfaces.o .libs/module_netcdf4_f03.o .libs/nf_lib.o .libs/nf_nc4.o .libs/netcdf4.o .libs/nf_v2compat.o .libs/module_netcdf_fortv2_c_interfaces.o .libs/nf_fortv2.o -lnetcdf -O2 -Wl,-soname -Wl,libnetcdff.so.6 -o .libs/libnetcdff.so.6.1.1 libtool: link: (cd ".libs" && rm -f "libnetcdff.so.6" && ln -s "libnetcdff.so.6.1.1" "libnetcdff.so.6") libtool: link: (cd ".libs" && rm -f "libnetcdff.so" && ln -s "libnetcdff.so.6.1.1" "libnetcdff.so") libtool: link: ( cd ".libs" && rm -f "libnetcdff.la" && ln -s "../libnetcdff.la" "libnetcdff.la" ) make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' Making all in nf_test make[2]: Nothing to be done for 'all'. Making all in nf03_test make[2]: Nothing to be done for 'all'. Making all in docs make[2]: Nothing to be done for 'all'. Making all in examples Making all in F77 make[3]: Nothing to be done for 'all'. Making all in F90 make all-am make[4]: Nothing to be done for 'all-am'. make[3]: Nothing to be done for 'all-am'. Making all in CMakeExtras make[2]: Nothing to be done for 'all'. + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.4465 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/libnetcdff6-mpi-buildroot + : + /bin/rm -rf -- /usr/src/tmp/libnetcdff6-mpi-buildroot + cd libnetcdff6-mpi-4.4.4 + source /usr/lib64/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib64/openmpi/bin ++ PATH=/usr/lib64/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib64/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib64/openmpi/man ++ MANPATH=/usr/lib64/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib' + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/libnetcdff6-mpi-buildroot make: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' Making install in fortran make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make install-am make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib' /bin/sh ../libtool --mode=install /bin/install -p libnetcdff.la '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib' libtool: install: /bin/install -p .libs/libnetcdff.so.6.1.1 /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdff.so.6.1.1 libtool: install: (cd /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib && { ln -s -f libnetcdff.so.6.1.1 libnetcdff.so.6 || { rm -f libnetcdff.so.6 && ln -s libnetcdff.so.6.1.1 libnetcdff.so.6; }; }) libtool: install: (cd /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib && { ln -s -f libnetcdff.so.6.1.1 libnetcdff.so || { rm -f libnetcdff.so && ln -s libnetcdff.so.6.1.1 libnetcdff.so; }; }) libtool: install: /bin/install -p .libs/libnetcdff.lai /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdff.la libtool: install: warning: remember to run `libtool --finish /usr/lib64/openmpi/lib' /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include' /bin/install -p -m 644 netcdf_nc_data.mod netcdf_nc_interfaces.mod netcdf_nf_data.mod netcdf_nf_interfaces.mod netcdf_f03.mod netcdf_fortv2_c_interfaces.mod netcdf4_nc_interfaces.mod netcdf4_nf_interfaces.mod netcdf4_f03.mod typesizes.mod netcdf.mod netcdf.inc '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include' make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/fortran' Making install in nf_test make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf_test' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf_test' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf_test' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf_test' Making install in nf03_test make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf03_test' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf03_test' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf03_test' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/nf03_test' Making install in docs make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/docs' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/docs' make[2]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/man/man3' /bin/install -p -m 644 netcdf_fortran.3 '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/man/man3' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/docs' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/docs' Making install in examples make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' Making install in F77 make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F77' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F77' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F77' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F77' Making install in F90 make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make install-am make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[4]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples/F90' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/examples' Making install in CMakeExtras make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/CMakeExtras' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/CMakeExtras' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/CMakeExtras' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4/CMakeExtras' make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/bin' /bin/install -p nf-config '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/bin' /bin/mkdir -p '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/pkgconfig' /bin/install -p -m 644 netcdf-fortran.pc '/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/pkgconfig' make install-data-hook make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' +-------------------------------------------------------------+ | Congratulations! You have successfully installed the netCDF | | Fortran libraries. | | | | You can use script "nf-config" to find out the relevant | | compiler options to build your application. Enter | | | | nf-config --help | | | | for additional information. | | | | CAUTION: | | | | If you have not already run "make check", then we strongly | | recommend you do so. It does not take very long. | | | | Before using netCDF to store important data, test your | | build with "make check". | | | | NetCDF is tested nightly on many platforms at Unidata | | but your platform is probably different in some ways. | | | | If any tests fail, please see the netCDF web site: | | http://www.unidata.ucar.edu/software/netcdf/ | | | | NetCDF is developed and maintained at the Unidata Program | | Center. Unidata provides a broad array of data and software | | tools for use in geoscience education and research. | | http://www.unidata.ucar.edu | +-------------------------------------------------------------+ make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' make: Leaving directory '/usr/src/RPM/BUILD/libnetcdff6-mpi-4.4.4' + install -d /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf + mv /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf.inc /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf4_f03.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf4_nc_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf4_nf_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_f03.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_fortv2_c_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_nc_data.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_nc_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_nf_data.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf_nf_interfaces.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/typesizes.mod /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/include/netcdf/ + rm -f /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib/libnetcdff.la + install -d /usr/src/tmp/libnetcdff6-mpi-buildroot/etc/alternatives/packages.d + mkdir -p /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64 + pushd /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib ~/tmp/libnetcdff6-mpi-buildroot/usr/lib64/openmpi/lib ~/RPM/BUILD/libnetcdff6-mpi-4.4.4 + for i in 'libnetcdff.so.*' + ln -s ../../usr/lib64/openmpi/lib/libnetcdff.so.6 /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/ + echo '/usr/lib64/libnetcdff.so.6 /usr/lib64/openmpi/lib/libnetcdff.so.6 30' + for i in 'libnetcdff.so.*' + ln -s ../../usr/lib64/openmpi/lib/libnetcdff.so.6.1.1 /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/lib64/ + echo '/usr/lib64/libnetcdff.so.6.1.1 /usr/lib64/openmpi/lib/libnetcdff.so.6.1.1 30' ++ ls libnetcdff.so + for i in '$(ls *.so)' + echo '/usr/lib64/libnetcdff.so /usr/lib64/openmpi/lib/libnetcdff.so 30' + echo '/usr/bin/nf-config /usr/lib64/openmpi/bin/nf-config 30' + echo '/usr/lib64/pkgconfig/netcdf-fortran.pc /usr/lib64/openmpi/lib/pkgconfig/netcdf-fortran.pc 30' + popd ~/RPM/BUILD/libnetcdff6-mpi-4.4.4 + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/libnetcdff6-mpi-buildroot (auto) mode of './usr/lib64/openmpi/lib/libnetcdff.so.6.1.1' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/libnetcdff6-mpi-buildroot (binconfig,pkgconfig,libtool,desktop) Checking contents of files in /usr/src/tmp/libnetcdff6-mpi-buildroot/ (default) Compressing files in /usr/src/tmp/libnetcdff6-mpi-buildroot (auto) Adjusting library links in /usr/src/tmp/libnetcdff6-mpi-buildroot ./usr/lib64: ./usr/lib64/openmpi/lib: libnetcdff.so.6 -> libnetcdff.so.6.1.1 Verifying ELF objects in /usr/src/tmp/libnetcdff6-mpi-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Hardlinking identical .pyc and .pyo files Processing files: libnetcdff6-mpi-4.4.4-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.49015 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdff6-mpi-4.4.4 + DOCDIR=/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + export DOCDIR + rm -rf /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + /bin/mkdir -p /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + cp -prL COPYRIGHT README.md /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + chmod -R go-w /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + chmod -R a+rX /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-4.4.4 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.gEX3sp find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.V0ee4B find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Provides: libnetcdff-mpi = 4.4.4-alt1, libnetcdff6-mpi = 4.4.4-alt1, /usr/lib64/libnetcdff.so.6 = 30, /usr/lib64/libnetcdff.so.6.1.1 = 30, libnetcdff.so.6()(64bit) = set:ndZ97dGpOqtnj7lczmtoqWEmxyIKXAPE1TcloGYOq0byeGS46jiAI58CLW9gyVdvrPYbABqBlMj2NoOEUsvdHcizpowbNZ08XqJJCoOFX80sNg58jlx0GZcVSGpNN6YaxrnGmZlm0M44UwCPZmbEhvQ3qaJAOUMJk9McgtyzjZghlPQINURd7A2oX5sozw1XZoe8wRhDFsplc6Qu2eXs8WJiEMJMV4cbZCuRFRWHzBvN5pucL5X8jZi9xx3x3ZsYlWxZI4G0Gt1M90kFnZox5FgkuyYwksjc9qR98yZzYJQ8MNKG9ZglOnZAG7Tkc0iJK18XyNbPbBSoNQNGi4p8U4mFlk4ivsiD4YgJwcy279vzGv6VissgVfYItgddp2gaMZghp4Zq72NHB6xlgjh26uWQOArEsjQUUflV0NXZ0KZaSqgmLncTppaCDqM4zEaFLgbq6AwuOxHKzKFiA7YRn2k70pfs5iARSm6s6hdicOlv0R40YZia4RHhRYn7a2U35thSZ7NoxTnEaXty00gIzCUPpNqkzZjvrtZhEd8SukHp0EmP6E5aGv8JCAawt9w4OKAMGZaSzX2igx3Xq5ohwcpDanfn6AohkxoouF5hwCF48S6aqsWFAmeAgL76xCDkoAHAFejhZfx71Sts6hWnSOendV4hh2LigpylNVWsflooFq4dQjW5jQHZkhEP9ISrGofZEAbAwWz2Bsf6eWZGT4099pfpSUUC2u9TcaZjEIKEM2Ir0q9bWxdwVwo5RRT3ZFwiUS0ARpZ6U63v89wS7rJL25i0OzamZ7XZuiliVBOlX19Z8cNCuaZLU9vQEt5GQRX2gCx59EZhh4Y37cNAm5D2Zu970IbPa0RPlmoVJ6sk3QuBSwYTK0MKMCBT8lAAajonEIXD6I5C80mXgU20DQcyYGXzJ7gr20Ptx0YbG3o5AEPgM0quPvsVvPeRKbW89Uqar9PLsLAfp0SdIpfhAzl6K9h98StvOuUqZBw3ow04yASkM6ubgfSs1m4pPboCPrMTn2unSZJ9PI5SVA2LrcF890EqhAOvZ4elxZ1c7q7bZdGPvqzMI2qJC2vHBzZrwCAr0EjJpDjs413rnF0lZDj9DRJ4kR0Skk9kwzNGd31rotvmH91qICoAv1N6 Requires: libhdf5-8-mpi, libnetcdf11-mpi, /etc/alternatives/packages.d, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.4)(64bit), libgfortran.so.4()(64bit) >= set:okAVg4hvbZDOcso4VH48Z0FAcqgOidMv8D38x0, libgfortran.so.4(GFORTRAN_7)(64bit), libnetcdf.so.11()(64bit) >= set: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, rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Requires(post): alternatives Requires(preun): alternatives Conflicts: libnetcdff6-mpi < 4.4.4-alt1 Obsoletes: libnetcdff6-mpi < 4.4.4-alt1 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.kfs2RU Creating libnetcdff6-mpi-debuginfo package Processing files: libnetcdff-mpi-devel-4.4.4-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.DoaHYg find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.EGNSiG find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) find-requires: FINDPACKAGE-COMMANDS: cat Provides: /usr/bin/nf-config = 30, /usr/lib64/libnetcdff.so = 30, /usr/lib64/pkgconfig/netcdf-fortran.pc = 30 Requires: libnetcdff6-mpi = 4.4.4-alt1, libnetcdf-mpi-devel, /bin/sh, /etc/alternatives/packages.d, /usr/lib64/openmpi/lib/libnetcdff.so.6.1.1, coreutils Requires(post): alternatives Requires(preun): alternatives Conflicts: libnetcdff-devel < 4.0.1-alt6 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.dENHh9 Processing files: libnetcdff6-mpi-doc-4.4.4-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.65065 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdff6-mpi-4.4.4 + DOCDIR=/usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + export DOCDIR + rm -rf /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + /bin/mkdir -p /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + cp -prL docs/netcdf_fortran_4.4.2dev_notes_RW.pdf docs/CMakeLists.txt docs/footer.html examples /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + chmod -R go-w /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + chmod -R a+rX /usr/src/tmp/libnetcdff6-mpi-buildroot/usr/share/doc/libnetcdff6-mpi-doc-4.4.4 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.a4NruG find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.N1WK9g find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks) Conflicts: libnetcdff-devel Processing files: libnetcdff6-mpi-debuginfo-4.4.4-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.AyDRbV find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.n76gBC find-requires: running scripts (debuginfo) Provides: debug64(libnetcdff.so.6) Requires: libnetcdff6-mpi = 4.4.4-alt1, debug64(libc.so.6), debug64(libgfortran.so.4), debug64(libnetcdf.so.11) Removing 1 extra deps from libnetcdff-mpi-devel due to dependency on libnetcdff6-mpi Removing 2 extra deps from libnetcdff-mpi-devel due to repentancy on libnetcdff6-mpi Wrote: /usr/src/RPM/RPMS/x86_64/libnetcdff6-mpi-4.4.4-alt1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libnetcdff-mpi-devel-4.4.4-alt1.x86_64.rpm Wrote: /usr/src/RPM/RPMS/noarch/libnetcdff6-mpi-doc-4.4.4-alt1.noarch.rpm Wrote: /usr/src/RPM/RPMS/x86_64/libnetcdff6-mpi-debuginfo-4.4.4-alt1.x86_64.rpm 47.24user 5.15system 1:31.20elapsed 57%CPU (0avgtext+0avgdata 214376maxresident)k 0inputs+0outputs (0major+2061377minor)pagefaults 0swaps 62.06user 9.00system 2:02.51elapsed 58%CPU (0avgtext+0avgdata 214376maxresident)k 0inputs+0outputs (0major+2717693minor)pagefaults 0swaps --- libnetcdff6-mpi-4.4.4-alt1.x86_64.rpm.repo 2017-08-29 12:11:56.000000000 +0000 +++ libnetcdff6-mpi-4.4.4-alt1.x86_64.rpm.hasher 2018-11-05 02:59:33.348292544 +0000 @@ -15,5 +15,5 @@ Requires: libc.so.6(GLIBC_2.4)(64bit) -Requires: libgfortran.so.3()(64bit) >= set:okAVg4hvbZDOcso4VH48Z0FAcqgOidMv8D38x0 +Requires: libgfortran.so.4()(64bit) >= set:okAVg4hvbZDOcso4VH48Z0FAcqgOidMv8D38x0 Requires: rpmlib(SetVersions) -Requires: libgfortran.so.3(GFORTRAN_1.0)(64bit) +Requires: libgfortran.so.4(GFORTRAN_7)(64bit) Requires: libnetcdf.so.11()(64bit) >= set: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 --- libnetcdff6-mpi-debuginfo-4.4.4-alt1.x86_64.rpm.repo 2017-08-29 12:11:56.000000000 +0000 +++ libnetcdff6-mpi-debuginfo-4.4.4-alt1.x86_64.rpm.hasher 2018-11-05 02:59:33.380292621 +0000 @@ -45,3 +45,3 @@ Requires: debug64(libc.so.6) -Requires: debug64(libgfortran.so.3) +Requires: debug64(libgfortran.so.4) Requires: debug64(libnetcdf.so.11)