<86>Dec 21 08:42:07 userdel[3052620]: delete user 'rooter' <86>Dec 21 08:42:07 userdel[3052620]: removed group 'rooter' owned by 'rooter' <86>Dec 21 08:42:07 userdel[3052620]: removed shadow group 'rooter' owned by 'rooter' <86>Dec 21 08:42:07 groupadd[3052635]: group added to /etc/group: name=rooter, GID=1862 <86>Dec 21 08:42:07 groupadd[3052635]: group added to /etc/gshadow: name=rooter <86>Dec 21 08:42:07 groupadd[3052635]: new group: name=rooter, GID=1862 <86>Dec 21 08:42:07 useradd[3052648]: new user: name=rooter, UID=1862, GID=1862, home=/root, shell=/bin/bash, from=none <86>Dec 21 08:42:07 userdel[3052675]: delete user 'builder' <86>Dec 21 08:42:07 userdel[3052675]: removed group 'builder' owned by 'builder' <86>Dec 21 08:42:07 userdel[3052675]: removed shadow group 'builder' owned by 'builder' <86>Dec 21 08:42:07 groupadd[3052687]: group added to /etc/group: name=builder, GID=1863 <86>Dec 21 08:42:07 groupadd[3052687]: group added to /etc/gshadow: name=builder <86>Dec 21 08:42:07 groupadd[3052687]: new group: name=builder, GID=1863 <86>Dec 21 08:42:07 useradd[3052696]: new user: name=builder, UID=1863, GID=1863, home=/usr/src, shell=/bin/bash, from=none warning: user mike does not exist - using root warning: group mike does not exist - using root warning: user mike does not exist - using root warning: group mike does not exist - using root warning: user mike does not exist - using root warning: group mike does not exist - using root warning: user mike does not exist - using root warning: group mike does not exist - using root warning: user mike does not exist - using root warning: group mike does not exist - using root warning: user mike does not exist - using root warning: group mike does not exist - using root warning: user mike does not exist - using root warning: group mike does not exist - using root warning: user mike does not exist - using root warning: group mike does not exist - using root warning: user mike does not exist - using root warning: group mike does not exist - using root <13>Dec 21 08:42:11 rpmi: xorg-proto-devel-2024.1-alt1 sisyphus+343583.40.1.1 1711440649 installed <13>Dec 21 08:42:11 rpmi: libXau-1.0.11-alt1 sisyphus+311428.100.1.1 1670577440 installed <13>Dec 21 08:42:11 rpmi: libCVector-1.0.3.1-alt2 1316809891 installed <13>Dec 21 08:42:11 rpmi: libquadmath0-14.2.1-alt1 sisyphus+360995.100.1.1 1730131612 installed <13>Dec 21 08:42:11 rpmi: libgfortran5-14.2.1-alt1 sisyphus+360995.100.1.1 1730131612 installed <13>Dec 21 08:42:11 rpmi: libCBFlib-0.9.2.3-alt3 sisyphus+269998.200.2.1 1618495167 installed <13>Dec 21 08:42:11 rpmi: libquadmath14-devel-14.2.1-alt1 sisyphus+360995.100.1.1 1730131612 installed <13>Dec 21 08:42:11 rpmi: libCVector-devel-1.0.3.1-alt2 1316809891 installed <13>Dec 21 08:42:11 rpmi: libNearTree-5.1.1-alt1 sisyphus+220437.100.1.1 1549114851 installed <13>Dec 21 08:42:11 rpmi: libXau-devel-1.0.11-alt1 sisyphus+311428.100.1.1 1670577440 installed <13>Dec 21 08:42:11 rpmi: gcc-fortran-common-1.4.28-alt1 sisyphus+348678.100.1.1 1716396142 installed <13>Dec 21 08:42:11 rpmi: libgfortran14-devel-14.2.1-alt1 sisyphus+360995.100.1.1 1730131612 installed <13>Dec 21 08:42:11 rpmi: libX11-locales-3:1.8.10-alt1 sisyphus+353866.100.1.1 1722240771 installed <13>Dec 21 08:42:11 rpmi: libXdmcp-1.1.5-alt1 sisyphus+343583.700.1.1 1711441073 installed <13>Dec 21 08:42:11 rpmi: libxcb-1.17.0-alt1 sisyphus+345308.200.1.1 1713342009 installed <13>Dec 21 08:42:11 rpmi: libX11-3:1.8.10-alt1 sisyphus+353866.100.1.1 1722240774 installed <13>Dec 21 08:42:11 rpmi: libXext-1.3.6-alt1 sisyphus+343583.1000.1.1 1711441114 installed <13>Dec 21 08:42:11 rpmi: libXi-1.8-alt1 sisyphus+285490.200.1.1 1632124180 installed <13>Dec 21 08:42:11 rpmi: libXfixes-6.0.1-alt1 sisyphus+331490.300.1.1 1697023235 installed <13>Dec 21 08:42:12 rpmi: libxcb-devel-1.17.0-alt1 sisyphus+345308.200.1.1 1713342009 installed <13>Dec 21 08:42:13 rpmi: libX11-devel-3:1.8.10-alt1 sisyphus+353866.100.1.1 1722240774 installed <13>Dec 21 08:42:13 rpmi: libXext-devel-1.3.6-alt1 sisyphus+343583.1000.1.1 1711441114 installed <13>Dec 21 08:42:13 rpmi: libXfixes-devel-6.0.1-alt1 sisyphus+331490.300.1.1 1697023235 installed <13>Dec 21 08:42:13 rpmi: libCQRlib-1.1.2-alt2 1316809838 installed <13>Dec 21 08:42:13 rpmi: libCQRlib-devel-1.1.2-alt2 1316809838 installed <13>Dec 21 08:42:13 rpmi: libXi-devel-1.8-alt1 sisyphus+285490.200.1.1 1632124180 installed <13>Dec 21 08:42:13 rpmi: libgfortran-devel-14-alt1 sisyphus+360995.300.1.1 1730139222 installed <13>Dec 21 08:42:13 rpmi: libNearTree-devel-5.1.1-alt1 sisyphus+220437.100.1.1 1549114851 installed <13>Dec 21 08:42:13 rpmi: libCBFlib-devel-0.9.2.3-alt3 sisyphus+269998.200.2.1 1618495167 installed <13>Dec 21 08:42:13 rpmi: xorg-cf-files-1.0.7-alt3 sisyphus+299066.100.1.1 1650986802 installed <13>Dec 21 08:42:13 rpmi: imake-1.0.8-alt1 sisyphus+346312.200.2.1 1716446984 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/RasMol-2.7.5.2-alt7.nosrc.rpm (w1.gzdio) Installing RasMol-2.7.5.2-alt7.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.17415 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf RasMol-2.7.5.2 + echo 'Source #0 (rasmol-2.7.5.2-13May11.tar.gz):' Source #0 (rasmol-2.7.5.2-13May11.tar.gz): + /usr/bin/gzip -dc /usr/src/RPM/SOURCES/rasmol-2.7.5.2-13May11.tar.gz + /bin/tar -xf - + cd RasMol-2.7.5.2 + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #0 (RasMol-2.7.5-gentoo-bundled-lib.patch):' Patch #0 (RasMol-2.7.5-gentoo-bundled-lib.patch): + /usr/bin/patch -p1 patching file src/Imakefile patching file src/Makefile.in + sed -i 's,^#include \(<\|"\)cbf,#include \1cbf/cbf,' src/cif.h src/maps.c + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.17415 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd RasMol-2.7.5.2 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic' + pushd src ~/RPM/BUILD/RasMol-2.7.5.2/src ~/RPM/BUILD/RasMol-2.7.5.2 + xmkmf imake -DUseInstalled -I/usr/share/X11/config In file included from /usr/share/X11/config/Imake.tmpl:110, from Imakefile.c:34: /usr/share/X11/config/linux.cf:198: warning: "XAppLoadDir" redefined 198 | # define XAppLoadDir /usr/share/X11/app-defaults In file included from /usr/share/X11/config/site.def:45, from /usr/share/X11/config/Imake.tmpl:47: /usr/share/X11/config/host.def:29: note: this is the location of the previous definition 29 | #define XAppLoadDir /etc/X11/app-defaults In file included from /usr/share/X11/config/site.def:155, from /usr/share/X11/config/Imake.tmpl:116: /usr/share/X11/config/host.def:29: warning: "XAppLoadDir" redefined 29 | #define XAppLoadDir /etc/X11/app-defaults /usr/share/X11/config/linux.cf:198: note: this is the location of the previous definition 198 | # define XAppLoadDir /usr/share/X11/app-defaults In file included from /usr/share/X11/config/Imake.tmpl:2147: /usr/share/X11/config/X11.rules:39: warning: "XBinDir" redefined 39 | # define XBinDir $(XPROJECTROOT)/bin /usr/share/X11/config/host.def:14: note: this is the location of the previous definition 14 | #define XBinDir /usr/bin /usr/share/X11/config/X11.rules:47: warning: "XUsrLibDirPath" redefined 47 | # define XUsrLibDirPath $(USRLIBDIR):$(XPROJECTROOT)/lib /usr/share/X11/config/host.def:16: note: this is the location of the previous definition 16 | #define XUsrLibDirPath /usr/lib + subst s/-mcpu=i686/-mtune=i686/ Makefile + make clean rasmol DEPTHDEF=-DEIGHTBIT make: Entering directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o rasmol.o rasmol.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ rasmol.c:1170:15: warning: 'DetermineRasMolPath' defined but not used [-Wunused-function] 1170 | static size_t DetermineRasMolPath( char * rpath, size_t maxlen) { | ^~~~~~~~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o molecule.o molecule.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from molecule.c:220: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ molecule.c: In function 'CreateSurfaceBonds': molecule.c:2152:27: warning: variable 'dz' set but not used [-Wunused-but-set-variable] 2152 | register Long dx, dy, dz; | ^~ molecule.c:2152:23: warning: variable 'dy' set but not used [-Wunused-but-set-variable] 2152 | register Long dx, dy, dz; | ^~ molecule.c:2152:19: warning: variable 'dx' set but not used [-Wunused-but-set-variable] 2152 | register Long dx, dy, dz; | ^~ molecule.c: At top level: molecule.c:1722:13: warning: 'TestSurface' defined but not used [-Wunused-function] 1722 | static void TestSurface( RAtom __far *sptr, RAtom __far *dptr ) | ^~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o abstree.o abstree.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from abstree.c:81: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cmndline.o cmndline.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cmndline.c:82: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ cmndline.c: In function 'ProcessMouseMove': cmndline.c:929:7: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 929 | for (index=0; index<10; index++) | ^~~ cmndline.c:931:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 931 | SaveQuat.w = DialQRot.w; | ^~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o command.o command.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from command.c:91: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'Find_Symbol_Definition': command.c:1072:18: warning: variable 'prevsymbol' set but not used [-Wunused-but-set-variable] 1072 | Symbol __far * prevsymbol; | ^~~~~~~~~~ command.c: In function 'PlayMovieFrame': command.c:1493:13: warning: variable 'checkfile' set but not used [-Wunused-but-set-variable] 1493 | int checkfile; | ^~~~~~~~~ command.c: In function 'ParseExpression': command.c:2215:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2215 | case(SheetTok): if( Info.laddercount < 0 ) | ^~ command.c:2217:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2217 | pred = PredSheet; | ^~~~ command.c:2219:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2219 | case(TurnTok): if( Info.turncount < 0 ) | ^~ command.c:2221:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2221 | pred = PredTurn; | ^~~~ command.c:2223:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2223 | case(CystineTok): if( Info.ssbondcount < 0 ) | ^~ command.c:2225:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2225 | pred = PredCystine; | ^~~~ command.c:2227:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2227 | case(CisBondedTok):if( Info.cisbondcount<0 ) | ^~ command.c:2229:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2229 | pred = PredCisBond; | ^~~~ command.c:2328:31: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2328 | case('-'): if( NextIf(NumberTok,ErrNotNum) ) | ^~ command.c:2330:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2330 | return( ParseRange(True) ); | ^~~~~~ command.c: In function 'ReadAtomSelection': command.c:4261:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 4261 | for( QAtom=QGroup->alist; QAtom; QAtom=QAtom->anext ) | ^~~ command.c:4263:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 4263 | SelectCount = 0; | ^~~~~~~~~~~ command.c:4279:25: warning: value computed is not used [-Wunused-value] 4279 | *TokenPtr--; | ^~~~~~~~~~~ command.c:4296:41: warning: value computed is not used [-Wunused-value] 4296 | *TokenPtr--; | ^~~~~~~~~~~ command.c:4337:13: warning: value computed is not used [-Wunused-value] 4337 | *TokenPtr++; | ^~~~~~~~~~~ command.c: In function 'ApplyMapAtomSelection': command.c:4752:12: warning: unused variable 'visits' [-Wunused-variable] 4752 | size_t visits; | ^~~~~~ command.c: In function 'ExecuteCommandOne': command.c:7488:27: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 7488 | case(ResetTok): for( i=0; i<10; i++ ) | ^~~ command.c:7490:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 7490 | ReDrawFlag |= RFDials; | ^~~~~~~~~~ command.c:7501:27: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 7501 | case(HelpTok): if( !HelpFileName ) | ^~ command.c:7503:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 7503 | if( HelpInfo ) | ^~ command.c: In function 'ExecuteIPCCommand': command.c:7964:16: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 7964 | } else if( *ptr=='[' ) | ^~ command.c:7967:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 7967 | if( len < MAXBUFFLEN-1 ) | ^~ command.c: At top level: command.c:902:12: warning: 'Define_Symbol' defined but not used [-Wunused-function] 902 | static int Define_Symbol(const char __far * string, const char __far * definition) { | ^~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o transfor.o transfor.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from transfor.c:198: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'SetVanWaalRadius': transfor.c:559:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 559 | if( (ptr->irad)+iProbeRad>MaxAtomRadius ) | ^~ transfor.c:561:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 561 | ptr->flag |= ExpandFlag; | ^~~ transfor.c:563:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 563 | if( ptr->irad>MaxAtomRadius ) | ^~ transfor.c:565:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 565 | ptr->flag &= ~ExpandFlag; | ^~~ transfor.c: In function 'ColourPointAttrib': transfor.c:2282:33: warning: variable 'result' set but not used [-Wunused-but-set-variable] 2282 | register int i,shade,nshade,result; | ^~~~~~ transfor.c: In function 'StructColourAttrib': transfor.c:3064:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 3064 | if( !Database ) | ^~ transfor.c:3066:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 3066 | ColourBondNone(); | ^~~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o render.o render.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from render.c:189: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ render.c: In function 'PickAtoms': render.c:2076:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2076 | if( !QAtom ) | ^~ render.c:2079:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2079 | if( PickMode==PickCentr && shift ) | ^~ render.c:2173:15: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 2173 | } else | ^~~~ render.c:2175:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 2175 | QAtom->label = label; | ^~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o repres.o repres.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from repres.c:234: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ repres.c: In function 'TestSolventDot': repres.c:987:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 987 | if( lx < 0 ) lx = 0; if( ux >= VOXORDER ) ux = VOXORDER-1; | ^~ repres.c:987:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 987 | if( lx < 0 ) lx = 0; if( ux >= VOXORDER ) ux = VOXORDER-1; | ^~ repres.c:988:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 988 | if( ly < 0 ) ly = 0; if( uy >= VOXORDER ) uy = VOXORDER-1; | ^~ repres.c:988:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 988 | if( ly < 0 ) ly = 0; if( uy >= VOXORDER ) uy = VOXORDER-1; | ^~ repres.c:989:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 989 | if( lz < 0 ) lz = 0; if( uz >= VOXORDER ) uz = VOXORDER-1; | ^~ repres.c:989:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 989 | if( lz < 0 ) lz = 0; if( uz >= VOXORDER ) uz = VOXORDER-1; | ^~ repres.c: In function 'CalculateSurface': repres.c:1113:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1113 | if( !Database ) | ^~ repres.c:1116:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1116 | DotCount = density; | ^~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o pixutils.o pixutils.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from pixutils.c:183: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ pixutils.c: In function 'ClipDashLine': pixutils.c:645:23: warning: variable 'ca' set but not used [-Wunused-but-set-variable] 645 | register Pixel c, ca, mid; | ^~ pixutils.c: In function 'DrawCircle': pixutils.c:2606:13: warning: variable 'updown' set but not used [-Wunused-but-set-variable] 2606 | int updown, ifirst; | ^~~~~~ pixutils.c: In function 'DrawCylinderCaps': pixutils.c:2986:21: warning: variable 'alts' set but not used [-Wunused-but-set-variable] 2986 | register int p, alts, altc; | ^~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o outfile.o outfile.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from outfile.c:170: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteVectDots': outfile.c:1998:24: warning: variable 'tump' set but not used [-Wunused-but-set-variable] 1998 | register int temp, tump; | ^~~~ outfile.c:1998:18: warning: variable 'temp' set but not used [-Wunused-but-set-variable] 1998 | register int temp, tump; | ^~~~ outfile.c: In function 'WriteVectMapPoints': outfile.c:2038:24: warning: variable 'tump' set but not used [-Wunused-but-set-variable] 2038 | register int temp, tump; | ^~~~ outfile.c:2038:18: warning: variable 'temp' set but not used [-Wunused-but-set-variable] 2038 | register int temp, tump; | ^~~~ outfile.c: In function 'R3DSphere': outfile.c:2601:31: warning: variable 'z1' set but not used [-Wunused-but-set-variable] 2601 | register Real x1, y1, z1; /* coordinates after rotation and translation*/ | ^~ outfile.c:2601:27: warning: variable 'y1' set but not used [-Wunused-but-set-variable] 2601 | register Real x1, y1, z1; /* coordinates after rotation and translation*/ | ^~ outfile.c:2601:23: warning: variable 'x1' set but not used [-Wunused-but-set-variable] 2601 | register Real x1, y1, z1; /* coordinates after rotation and translation*/ | ^~ outfile.c: In function 'R3DStrandRibbon': outfile.c:2956:28: warning: variable 'qsz' set but not used [-Wunused-but-set-variable] 2956 | register int qsx, qsy, qsz; | ^~~ outfile.c: At top level: outfile.c:2082:13: warning: 'WriteVectMapBonds' defined but not used [-Wunused-function] 2082 | static void WriteVectMapBonds( void) { | ^~~~~~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o script.o script.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from script.c:164: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ script.c:2342:13: warning: 'WriteVRMLLine' defined but not used [-Wunused-function] 2342 | static void WriteVRMLLine( int src, int dst, int shade, int *flag ) | ^~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o infile.o infile.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from infile.c:196: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ infile.c: In function 'ApplyBondInfo': infile.c:671:14: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 671 | for(aptr2=group2->alist; aptr2; aptr2=aptr2->anext) | ^~~ infile.c:696:16: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 696 | if (AtomNum1) break; | ^~ infile.c: In function 'LoadXYZMolecule': infile.c:1365:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1365 | if( !FetchRecord(DataFile,Record) ) | ^~ infile.c:1367:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1367 | xpos = ypos = zpos = 0.0; | ^~~~ infile.c: In function 'LoadCIFMolecule': infile.c:2210:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2210 | if (!cif_datablock_name (cif, &dbname)) | ^~ infile.c:2212:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2212 | Info.moleculename[55] = '\0'; | ^~~~ infile.c:3232:13: warning: variable 'oNMRModel' set but not used [-Wunused-but-set-variable] 3232 | int oNMRModel; | ^~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o tokens.o tokens.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_fract.o cif_fract.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cif_fract.c:197: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif.o cif.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cif.c:278: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ cif.c: In function 'cif_read_file': cif.c:344:17: warning: pointer 'ciftmp_32' may be used after 'free' [-Wuse-after-free] 344 | sprintf(buffer,"Failed to write %s.\n", ciftmp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rasmol.h:260:20: note: call to 'free' here 260 | #define _ffree free cif.c:336:17: warning: pointer 'ciftmp_32' may be used after 'free' [-Wuse-after-free] 336 | sprintf(buffer,"Failed to write %s.\n", ciftmp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rasmol.h:260:20: note: call to 'free' here 260 | #define _ffree free cif.c:330:17: warning: pointer 'ciftmp_32' may be used after 'free' [-Wuse-after-free] 330 | sprintf(buffer,"Failed to write %s.\n", ciftmp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rasmol.h:260:20: note: call to 'free' here 260 | #define _ffree free gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_ctonum.o cif_ctonum.c cif_ctonum.c:198:9: warning: "_USE_RASMOL_H_" redefined 198 | #define _USE_RASMOL_H_ | ^~~~~~~~~~~~~~ : note: this is the location of the previous definition In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cif_ctonum.c:200: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_stx.o cif_stx.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from cif_stx.c:227: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o multiple.o multiple.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from multiple.c:225: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o vector.o vector.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from vector.c:159: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o wbrotate.o wbrotate.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from wbrotate.c:201: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from langsel_unix.c:114: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ langsel_unix.c: In function 'SwitchLang': langsel_unix.c:2347:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2347 | if (Interactive) | ^~ langsel_unix.c:2349:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2349 | if (Language != lang) { | ^~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o maps.o maps.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from maps.c:81: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ maps.c: In function 'SaveMapFile': maps.c:401:13: warning: the comparison will always evaluate as 'true' for the address of 'identcode' will never be NULL [-Waddress] 401 | if (Info.identcode && *Info.identcode) { | ^~~~ In file included from maps.c:88: molecule.h:422:14: note: 'identcode' declared here 422 | char identcode[80]; | ^~~~~~~~~ maps.c:429:55: warning: variable 'fcmapmask_zbase' set but not used [-Wunused-but-set-variable] 429 | double fcmapmask_xbase=0., fcmapmask_ybase=0, fcmapmask_zbase=0.; | ^~~~~~~~~~~~~~~ maps.c:429:36: warning: variable 'fcmapmask_ybase' set but not used [-Wunused-but-set-variable] 429 | double fcmapmask_xbase=0., fcmapmask_ybase=0, fcmapmask_zbase=0.; | ^~~~~~~~~~~~~~~ maps.c:429:16: warning: variable 'fcmapmask_xbase' set but not used [-Wunused-but-set-variable] 429 | double fcmapmask_xbase=0., fcmapmask_ybase=0, fcmapmask_zbase=0.; | ^~~~~~~~~~~~~~~ maps.c:428:48: warning: variable 'fcmap_zbase' set but not used [-Wunused-but-set-variable] 428 | double fcmap_xbase=0., fcmap_ybase=0., fcmap_zbase=0.; | ^~~~~~~~~~~ maps.c:428:32: warning: variable 'fcmap_ybase' set but not used [-Wunused-but-set-variable] 428 | double fcmap_xbase=0., fcmap_ybase=0., fcmap_zbase=0.; | ^~~~~~~~~~~ maps.c:428:16: warning: variable 'fcmap_xbase' set but not used [-Wunused-but-set-variable] 428 | double fcmap_xbase=0., fcmap_ybase=0., fcmap_zbase=0.; | ^~~~~~~~~~~ maps.c: In function 'LoadCBFMapFile': maps.c:1940:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1940 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1940:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1940 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1945:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1945 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1945:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1945 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1950:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1950 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1950:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1950 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1955:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1955 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1955:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1955 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1966:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1966 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1966:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1966 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1976:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1976 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1976:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1976 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1981:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1981 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1981:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1981 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1986:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1986 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1986:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1986 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1991:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1991 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1991:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1991 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:2001:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2001 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2001:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2001 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:2023:11: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2023 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2023:33: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2023 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2093:11: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2093 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2093:33: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2093 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1758:12: warning: variable 'fcmapmask_xbase' set but not used [-Wunused-but-set-variable] 1758 | double fcmapmask_xbase, fcmapmask_ybase, fcmapmask_zbase; | ^~~~~~~~~~~~~~~ maps.c:1757:12: warning: variable 'fcmap_xbase' set but not used [-Wunused-but-set-variable] 1757 | double fcmap_xbase, fcmap_ybase, fcmap_zbase; | ^~~~~~~~~~~ maps.c:1756:12: warning: variable 'ocmapmask_xbase' set but not used [-Wunused-but-set-variable] 1756 | double ocmapmask_xbase, ocmapmask_ybase, ocmapmask_zbase; | ^~~~~~~~~~~~~~~ maps.c:1755:12: warning: variable 'ocmap_xbase' set but not used [-Wunused-but-set-variable] 1755 | double ocmap_xbase, ocmap_ybase, ocmap_zbase; | ^~~~~~~~~~~ maps.c:1754:12: warning: variable 'mapmask_xbase' set but not used [-Wunused-but-set-variable] 1754 | Long mapmask_xbase, mapmask_ybase, mapmask_zbase; | ^~~~~~~~~~~~~ maps.c:1753:12: warning: variable 'map_xbase' set but not used [-Wunused-but-set-variable] 1753 | Long map_xbase, map_ybase, map_zbase; | ^~~~~~~~~ maps.c: In function 'LoadCCP4MapFile': maps.c:2988:9: warning: variable 'rawelsize' set but not used [-Wunused-but-set-variable] 2988 | int rawelsize; | ^~~~~~~~~ In file included from maps.c:96: maps.c: In function 'map_points': maps.c:4575:42: warning: the address of 'gradient' will always evaluate as 'true' [-Waddress] 4575 | MapPointm2o(map,mp,gradient); | ^~~~~~~~ maps.h:187:10: note: in definition of macro 'MapPointm2o' 187 | if (gradient) { \ | ^~~~~~~~ maps.c:4399:12: warning: variable 'koffsets' set but not used [-Wunused-but-set-variable] 4399 | Long koffsets[3][2]; /* The offsets back to the prior cells */ | ^~~~~~~~ maps.c:4398:11: warning: variable 'odirs' set but not used [-Wunused-but-set-variable] 4398 | int odirs[3][2]; /* {Y,Z}, {Z,X}, {X,Y} */ | ^~~~~ maps.c:4396:39: warning: variable 'havebody' set but not used [-Wunused-but-set-variable] 4396 | int haveedges[3], havefaces[3], havebody; | ^~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DEIGHTBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o x11win.o x11win.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:232: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ rm -f rasmol gcc -m32 -o rasmol -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -L/usr/lib -L/usr/lib rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o x11win.o -lm -lXi -lXext -lX11 -lcbf -lCQRlib -lCVector -lCNearTree -lgfortran transfor.c: In function 'ScaleColourMap': transfor.c:1702:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 1702 | { ScaleRef[i].r = 0; | ^ transfor.h:284:10: note: at offset 124 into destination object 'ScaleRef' of size 120 284 | ShadeRef ScaleRef[LastShade]; | ^ transfor.c:1704:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1704 | ScaleRef[i].b = 255; | ^ transfor.h:284:10: note: at offset 126 into destination object 'ScaleRef' of size 120 284 | ShadeRef ScaleRef[LastShade]; | ^ infile.c: In function 'ConvertNames.constprop': infile.c:2079:5: warning: '__builtin___strcpy_chk' writing between 6 and 2147483646 bytes into a region of size 5 [-Wstringop-overflow=] 2079 | strcpy(tmparg,label_atom_id); | ^ infile.c:2057:16: note: destination object 'tmparg' of size 5 2057 | char __far tmparg[5]; | ^ make: Leaving directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src' + mv rasmol rasmol-8bpp + make clean rasmol DEPTHDEF=-DSIXTEENBIT make: Entering directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o rasmol.o rasmol.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ rasmol.c:1170:15: warning: 'DetermineRasMolPath' defined but not used [-Wunused-function] 1170 | static size_t DetermineRasMolPath( char * rpath, size_t maxlen) { | ^~~~~~~~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o molecule.o molecule.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from molecule.c:220: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ molecule.c: In function 'CreateSurfaceBonds': molecule.c:2152:27: warning: variable 'dz' set but not used [-Wunused-but-set-variable] 2152 | register Long dx, dy, dz; | ^~ molecule.c:2152:23: warning: variable 'dy' set but not used [-Wunused-but-set-variable] 2152 | register Long dx, dy, dz; | ^~ molecule.c:2152:19: warning: variable 'dx' set but not used [-Wunused-but-set-variable] 2152 | register Long dx, dy, dz; | ^~ molecule.c: At top level: molecule.c:1722:13: warning: 'TestSurface' defined but not used [-Wunused-function] 1722 | static void TestSurface( RAtom __far *sptr, RAtom __far *dptr ) | ^~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o abstree.o abstree.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from abstree.c:81: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cmndline.o cmndline.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cmndline.c:82: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ cmndline.c: In function 'ProcessMouseMove': cmndline.c:929:7: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 929 | for (index=0; index<10; index++) | ^~~ cmndline.c:931:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 931 | SaveQuat.w = DialQRot.w; | ^~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o command.o command.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from command.c:91: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'Find_Symbol_Definition': command.c:1072:18: warning: variable 'prevsymbol' set but not used [-Wunused-but-set-variable] 1072 | Symbol __far * prevsymbol; | ^~~~~~~~~~ command.c: In function 'PlayMovieFrame': command.c:1493:13: warning: variable 'checkfile' set but not used [-Wunused-but-set-variable] 1493 | int checkfile; | ^~~~~~~~~ command.c: In function 'ParseExpression': command.c:2215:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2215 | case(SheetTok): if( Info.laddercount < 0 ) | ^~ command.c:2217:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2217 | pred = PredSheet; | ^~~~ command.c:2219:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2219 | case(TurnTok): if( Info.turncount < 0 ) | ^~ command.c:2221:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2221 | pred = PredTurn; | ^~~~ command.c:2223:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2223 | case(CystineTok): if( Info.ssbondcount < 0 ) | ^~ command.c:2225:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2225 | pred = PredCystine; | ^~~~ command.c:2227:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2227 | case(CisBondedTok):if( Info.cisbondcount<0 ) | ^~ command.c:2229:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2229 | pred = PredCisBond; | ^~~~ command.c:2328:31: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2328 | case('-'): if( NextIf(NumberTok,ErrNotNum) ) | ^~ command.c:2330:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2330 | return( ParseRange(True) ); | ^~~~~~ command.c: In function 'ReadAtomSelection': command.c:4261:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 4261 | for( QAtom=QGroup->alist; QAtom; QAtom=QAtom->anext ) | ^~~ command.c:4263:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 4263 | SelectCount = 0; | ^~~~~~~~~~~ command.c:4279:25: warning: value computed is not used [-Wunused-value] 4279 | *TokenPtr--; | ^~~~~~~~~~~ command.c:4296:41: warning: value computed is not used [-Wunused-value] 4296 | *TokenPtr--; | ^~~~~~~~~~~ command.c:4337:13: warning: value computed is not used [-Wunused-value] 4337 | *TokenPtr++; | ^~~~~~~~~~~ command.c: In function 'ApplyMapAtomSelection': command.c:4752:12: warning: unused variable 'visits' [-Wunused-variable] 4752 | size_t visits; | ^~~~~~ command.c: In function 'ExecuteCommandOne': command.c:7488:27: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 7488 | case(ResetTok): for( i=0; i<10; i++ ) | ^~~ command.c:7490:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 7490 | ReDrawFlag |= RFDials; | ^~~~~~~~~~ command.c:7501:27: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 7501 | case(HelpTok): if( !HelpFileName ) | ^~ command.c:7503:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 7503 | if( HelpInfo ) | ^~ command.c: In function 'ExecuteIPCCommand': command.c:7964:16: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 7964 | } else if( *ptr=='[' ) | ^~ command.c:7967:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 7967 | if( len < MAXBUFFLEN-1 ) | ^~ command.c: At top level: command.c:902:12: warning: 'Define_Symbol' defined but not used [-Wunused-function] 902 | static int Define_Symbol(const char __far * string, const char __far * definition) { | ^~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o transfor.o transfor.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from transfor.c:198: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'SetVanWaalRadius': transfor.c:559:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 559 | if( (ptr->irad)+iProbeRad>MaxAtomRadius ) | ^~ transfor.c:561:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 561 | ptr->flag |= ExpandFlag; | ^~~ transfor.c:563:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 563 | if( ptr->irad>MaxAtomRadius ) | ^~ transfor.c:565:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 565 | ptr->flag &= ~ExpandFlag; | ^~~ transfor.c: In function 'ColourPointAttrib': transfor.c:2282:33: warning: variable 'result' set but not used [-Wunused-but-set-variable] 2282 | register int i,shade,nshade,result; | ^~~~~~ transfor.c: In function 'StructColourAttrib': transfor.c:3064:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 3064 | if( !Database ) | ^~ transfor.c:3066:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 3066 | ColourBondNone(); | ^~~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o render.o render.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from render.c:189: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ render.c: In function 'PickAtoms': render.c:2076:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2076 | if( !QAtom ) | ^~ render.c:2079:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2079 | if( PickMode==PickCentr && shift ) | ^~ render.c:2173:15: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 2173 | } else | ^~~~ render.c:2175:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 2175 | QAtom->label = label; | ^~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o repres.o repres.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from repres.c:234: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ repres.c: In function 'TestSolventDot': repres.c:987:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 987 | if( lx < 0 ) lx = 0; if( ux >= VOXORDER ) ux = VOXORDER-1; | ^~ repres.c:987:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 987 | if( lx < 0 ) lx = 0; if( ux >= VOXORDER ) ux = VOXORDER-1; | ^~ repres.c:988:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 988 | if( ly < 0 ) ly = 0; if( uy >= VOXORDER ) uy = VOXORDER-1; | ^~ repres.c:988:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 988 | if( ly < 0 ) ly = 0; if( uy >= VOXORDER ) uy = VOXORDER-1; | ^~ repres.c:989:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 989 | if( lz < 0 ) lz = 0; if( uz >= VOXORDER ) uz = VOXORDER-1; | ^~ repres.c:989:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 989 | if( lz < 0 ) lz = 0; if( uz >= VOXORDER ) uz = VOXORDER-1; | ^~ repres.c: In function 'CalculateSurface': repres.c:1113:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1113 | if( !Database ) | ^~ repres.c:1116:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1116 | DotCount = density; | ^~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o pixutils.o pixutils.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from pixutils.c:183: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ pixutils.c: In function 'ClipDashLine': pixutils.c:645:23: warning: variable 'ca' set but not used [-Wunused-but-set-variable] 645 | register Pixel c, ca, mid; | ^~ pixutils.c: In function 'DrawCircle': pixutils.c:2606:13: warning: variable 'updown' set but not used [-Wunused-but-set-variable] 2606 | int updown, ifirst; | ^~~~~~ pixutils.c: In function 'DrawCylinderCaps': pixutils.c:2986:21: warning: variable 'alts' set but not used [-Wunused-but-set-variable] 2986 | register int p, alts, altc; | ^~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o outfile.o outfile.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from outfile.c:170: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteVectDots': outfile.c:1998:24: warning: variable 'tump' set but not used [-Wunused-but-set-variable] 1998 | register int temp, tump; | ^~~~ outfile.c:1998:18: warning: variable 'temp' set but not used [-Wunused-but-set-variable] 1998 | register int temp, tump; | ^~~~ outfile.c: In function 'WriteVectMapPoints': outfile.c:2038:24: warning: variable 'tump' set but not used [-Wunused-but-set-variable] 2038 | register int temp, tump; | ^~~~ outfile.c:2038:18: warning: variable 'temp' set but not used [-Wunused-but-set-variable] 2038 | register int temp, tump; | ^~~~ outfile.c: In function 'R3DSphere': outfile.c:2601:31: warning: variable 'z1' set but not used [-Wunused-but-set-variable] 2601 | register Real x1, y1, z1; /* coordinates after rotation and translation*/ | ^~ outfile.c:2601:27: warning: variable 'y1' set but not used [-Wunused-but-set-variable] 2601 | register Real x1, y1, z1; /* coordinates after rotation and translation*/ | ^~ outfile.c:2601:23: warning: variable 'x1' set but not used [-Wunused-but-set-variable] 2601 | register Real x1, y1, z1; /* coordinates after rotation and translation*/ | ^~ outfile.c: In function 'R3DStrandRibbon': outfile.c:2956:28: warning: variable 'qsz' set but not used [-Wunused-but-set-variable] 2956 | register int qsx, qsy, qsz; | ^~~ outfile.c: At top level: outfile.c:2082:13: warning: 'WriteVectMapBonds' defined but not used [-Wunused-function] 2082 | static void WriteVectMapBonds( void) { | ^~~~~~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o script.o script.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from script.c:164: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ script.c:2342:13: warning: 'WriteVRMLLine' defined but not used [-Wunused-function] 2342 | static void WriteVRMLLine( int src, int dst, int shade, int *flag ) | ^~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o infile.o infile.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from infile.c:196: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ infile.c: In function 'ApplyBondInfo': infile.c:671:14: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 671 | for(aptr2=group2->alist; aptr2; aptr2=aptr2->anext) | ^~~ infile.c:696:16: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 696 | if (AtomNum1) break; | ^~ infile.c: In function 'LoadXYZMolecule': infile.c:1365:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1365 | if( !FetchRecord(DataFile,Record) ) | ^~ infile.c:1367:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1367 | xpos = ypos = zpos = 0.0; | ^~~~ infile.c: In function 'LoadCIFMolecule': infile.c:2210:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2210 | if (!cif_datablock_name (cif, &dbname)) | ^~ infile.c:2212:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2212 | Info.moleculename[55] = '\0'; | ^~~~ infile.c:3232:13: warning: variable 'oNMRModel' set but not used [-Wunused-but-set-variable] 3232 | int oNMRModel; | ^~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o tokens.o tokens.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_fract.o cif_fract.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cif_fract.c:197: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif.o cif.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cif.c:278: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ cif.c: In function 'cif_read_file': cif.c:344:17: warning: pointer 'ciftmp_32' may be used after 'free' [-Wuse-after-free] 344 | sprintf(buffer,"Failed to write %s.\n", ciftmp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rasmol.h:260:20: note: call to 'free' here 260 | #define _ffree free cif.c:336:17: warning: pointer 'ciftmp_32' may be used after 'free' [-Wuse-after-free] 336 | sprintf(buffer,"Failed to write %s.\n", ciftmp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rasmol.h:260:20: note: call to 'free' here 260 | #define _ffree free cif.c:330:17: warning: pointer 'ciftmp_32' may be used after 'free' [-Wuse-after-free] 330 | sprintf(buffer,"Failed to write %s.\n", ciftmp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rasmol.h:260:20: note: call to 'free' here 260 | #define _ffree free gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_ctonum.o cif_ctonum.c cif_ctonum.c:198:9: warning: "_USE_RASMOL_H_" redefined 198 | #define _USE_RASMOL_H_ | ^~~~~~~~~~~~~~ : note: this is the location of the previous definition In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cif_ctonum.c:200: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_stx.o cif_stx.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from cif_stx.c:227: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o multiple.o multiple.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from multiple.c:225: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o vector.o vector.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from vector.c:159: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o wbrotate.o wbrotate.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from wbrotate.c:201: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from langsel_unix.c:114: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ langsel_unix.c: In function 'SwitchLang': langsel_unix.c:2347:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2347 | if (Interactive) | ^~ langsel_unix.c:2349:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2349 | if (Language != lang) { | ^~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o maps.o maps.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from maps.c:81: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ maps.c: In function 'SaveMapFile': maps.c:401:13: warning: the comparison will always evaluate as 'true' for the address of 'identcode' will never be NULL [-Waddress] 401 | if (Info.identcode && *Info.identcode) { | ^~~~ In file included from maps.c:88: molecule.h:422:14: note: 'identcode' declared here 422 | char identcode[80]; | ^~~~~~~~~ maps.c:429:55: warning: variable 'fcmapmask_zbase' set but not used [-Wunused-but-set-variable] 429 | double fcmapmask_xbase=0., fcmapmask_ybase=0, fcmapmask_zbase=0.; | ^~~~~~~~~~~~~~~ maps.c:429:36: warning: variable 'fcmapmask_ybase' set but not used [-Wunused-but-set-variable] 429 | double fcmapmask_xbase=0., fcmapmask_ybase=0, fcmapmask_zbase=0.; | ^~~~~~~~~~~~~~~ maps.c:429:16: warning: variable 'fcmapmask_xbase' set but not used [-Wunused-but-set-variable] 429 | double fcmapmask_xbase=0., fcmapmask_ybase=0, fcmapmask_zbase=0.; | ^~~~~~~~~~~~~~~ maps.c:428:48: warning: variable 'fcmap_zbase' set but not used [-Wunused-but-set-variable] 428 | double fcmap_xbase=0., fcmap_ybase=0., fcmap_zbase=0.; | ^~~~~~~~~~~ maps.c:428:32: warning: variable 'fcmap_ybase' set but not used [-Wunused-but-set-variable] 428 | double fcmap_xbase=0., fcmap_ybase=0., fcmap_zbase=0.; | ^~~~~~~~~~~ maps.c:428:16: warning: variable 'fcmap_xbase' set but not used [-Wunused-but-set-variable] 428 | double fcmap_xbase=0., fcmap_ybase=0., fcmap_zbase=0.; | ^~~~~~~~~~~ maps.c: In function 'LoadCBFMapFile': maps.c:1940:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1940 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1940:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1940 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1945:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1945 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1945:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1945 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1950:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1950 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1950:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1950 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1955:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1955 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1955:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1955 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1966:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1966 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1966:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1966 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1976:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1976 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1976:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1976 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1981:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1981 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1981:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1981 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1986:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1986 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1986:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1986 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1991:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1991 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1991:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1991 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:2001:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2001 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2001:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2001 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:2023:11: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2023 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2023:33: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2023 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2093:11: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2093 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2093:33: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2093 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1758:12: warning: variable 'fcmapmask_xbase' set but not used [-Wunused-but-set-variable] 1758 | double fcmapmask_xbase, fcmapmask_ybase, fcmapmask_zbase; | ^~~~~~~~~~~~~~~ maps.c:1757:12: warning: variable 'fcmap_xbase' set but not used [-Wunused-but-set-variable] 1757 | double fcmap_xbase, fcmap_ybase, fcmap_zbase; | ^~~~~~~~~~~ maps.c:1756:12: warning: variable 'ocmapmask_xbase' set but not used [-Wunused-but-set-variable] 1756 | double ocmapmask_xbase, ocmapmask_ybase, ocmapmask_zbase; | ^~~~~~~~~~~~~~~ maps.c:1755:12: warning: variable 'ocmap_xbase' set but not used [-Wunused-but-set-variable] 1755 | double ocmap_xbase, ocmap_ybase, ocmap_zbase; | ^~~~~~~~~~~ maps.c:1754:12: warning: variable 'mapmask_xbase' set but not used [-Wunused-but-set-variable] 1754 | Long mapmask_xbase, mapmask_ybase, mapmask_zbase; | ^~~~~~~~~~~~~ maps.c:1753:12: warning: variable 'map_xbase' set but not used [-Wunused-but-set-variable] 1753 | Long map_xbase, map_ybase, map_zbase; | ^~~~~~~~~ maps.c: In function 'LoadCCP4MapFile': maps.c:2988:9: warning: variable 'rawelsize' set but not used [-Wunused-but-set-variable] 2988 | int rawelsize; | ^~~~~~~~~ In file included from maps.c:96: maps.c: In function 'map_points': maps.c:4575:42: warning: the address of 'gradient' will always evaluate as 'true' [-Waddress] 4575 | MapPointm2o(map,mp,gradient); | ^~~~~~~~ maps.h:187:10: note: in definition of macro 'MapPointm2o' 187 | if (gradient) { \ | ^~~~~~~~ maps.c:4399:12: warning: variable 'koffsets' set but not used [-Wunused-but-set-variable] 4399 | Long koffsets[3][2]; /* The offsets back to the prior cells */ | ^~~~~~~~ maps.c:4398:11: warning: variable 'odirs' set but not used [-Wunused-but-set-variable] 4398 | int odirs[3][2]; /* {Y,Z}, {Z,X}, {X,Y} */ | ^~~~~ maps.c:4396:39: warning: variable 'havebody' set but not used [-Wunused-but-set-variable] 4396 | int haveedges[3], havefaces[3], havebody; | ^~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DSIXTEENBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o x11win.o x11win.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:232: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ rm -f rasmol gcc -m32 -o rasmol -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -L/usr/lib -L/usr/lib rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o x11win.o -lm -lXi -lXext -lX11 -lcbf -lCQRlib -lCVector -lCNearTree -lgfortran transfor.c: In function 'ScaleColourMap': transfor.c:1702:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 1702 | { ScaleRef[i].r = 0; | ^ transfor.h:284:10: note: at offset 252 into destination object 'ScaleRef' of size 248 284 | ShadeRef ScaleRef[LastShade]; | ^ transfor.c:1704:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1704 | ScaleRef[i].b = 255; | ^ transfor.h:284:10: note: at offset 254 into destination object 'ScaleRef' of size 248 284 | ShadeRef ScaleRef[LastShade]; | ^ infile.c: In function 'ConvertNames.constprop': infile.c:2079:5: warning: '__builtin___strcpy_chk' writing between 6 and 2147483646 bytes into a region of size 5 [-Wstringop-overflow=] 2079 | strcpy(tmparg,label_atom_id); | ^ infile.c:2057:16: note: destination object 'tmparg' of size 5 2057 | char __far tmparg[5]; | ^ make: Leaving directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src' + mv rasmol rasmol-16bpp + make clean rasmol DEPTHDEF=-DTHIRTYTWOBIT make: Entering directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o rasmol.o rasmol.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ rasmol.c:1170:15: warning: 'DetermineRasMolPath' defined but not used [-Wunused-function] 1170 | static size_t DetermineRasMolPath( char * rpath, size_t maxlen) { | ^~~~~~~~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o molecule.o molecule.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from molecule.c:220: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ molecule.c: In function 'CreateSurfaceBonds': molecule.c:2152:27: warning: variable 'dz' set but not used [-Wunused-but-set-variable] 2152 | register Long dx, dy, dz; | ^~ molecule.c:2152:23: warning: variable 'dy' set but not used [-Wunused-but-set-variable] 2152 | register Long dx, dy, dz; | ^~ molecule.c:2152:19: warning: variable 'dx' set but not used [-Wunused-but-set-variable] 2152 | register Long dx, dy, dz; | ^~ molecule.c: At top level: molecule.c:1722:13: warning: 'TestSurface' defined but not used [-Wunused-function] 1722 | static void TestSurface( RAtom __far *sptr, RAtom __far *dptr ) | ^~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o abstree.o abstree.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from abstree.c:81: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cmndline.o cmndline.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cmndline.c:82: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ cmndline.c: In function 'ProcessMouseMove': cmndline.c:929:7: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 929 | for (index=0; index<10; index++) | ^~~ cmndline.c:931:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 931 | SaveQuat.w = DialQRot.w; | ^~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o command.o command.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from command.c:91: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'Find_Symbol_Definition': command.c:1072:18: warning: variable 'prevsymbol' set but not used [-Wunused-but-set-variable] 1072 | Symbol __far * prevsymbol; | ^~~~~~~~~~ command.c: In function 'PlayMovieFrame': command.c:1493:13: warning: variable 'checkfile' set but not used [-Wunused-but-set-variable] 1493 | int checkfile; | ^~~~~~~~~ command.c: In function 'ParseExpression': command.c:2215:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2215 | case(SheetTok): if( Info.laddercount < 0 ) | ^~ command.c:2217:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2217 | pred = PredSheet; | ^~~~ command.c:2219:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2219 | case(TurnTok): if( Info.turncount < 0 ) | ^~ command.c:2221:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2221 | pred = PredTurn; | ^~~~ command.c:2223:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2223 | case(CystineTok): if( Info.ssbondcount < 0 ) | ^~ command.c:2225:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2225 | pred = PredCystine; | ^~~~ command.c:2227:40: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2227 | case(CisBondedTok):if( Info.cisbondcount<0 ) | ^~ command.c:2229:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2229 | pred = PredCisBond; | ^~~~ command.c:2328:31: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2328 | case('-'): if( NextIf(NumberTok,ErrNotNum) ) | ^~ command.c:2330:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2330 | return( ParseRange(True) ); | ^~~~~~ command.c: In function 'ReadAtomSelection': command.c:4261:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 4261 | for( QAtom=QGroup->alist; QAtom; QAtom=QAtom->anext ) | ^~~ command.c:4263:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 4263 | SelectCount = 0; | ^~~~~~~~~~~ command.c:4279:25: warning: value computed is not used [-Wunused-value] 4279 | *TokenPtr--; | ^~~~~~~~~~~ command.c:4296:41: warning: value computed is not used [-Wunused-value] 4296 | *TokenPtr--; | ^~~~~~~~~~~ command.c:4337:13: warning: value computed is not used [-Wunused-value] 4337 | *TokenPtr++; | ^~~~~~~~~~~ command.c: In function 'ApplyMapAtomSelection': command.c:4752:12: warning: unused variable 'visits' [-Wunused-variable] 4752 | size_t visits; | ^~~~~~ command.c: In function 'ExecuteCommandOne': command.c:7488:27: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 7488 | case(ResetTok): for( i=0; i<10; i++ ) | ^~~ command.c:7490:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 7490 | ReDrawFlag |= RFDials; | ^~~~~~~~~~ command.c:7501:27: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 7501 | case(HelpTok): if( !HelpFileName ) | ^~ command.c:7503:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 7503 | if( HelpInfo ) | ^~ command.c: In function 'ExecuteIPCCommand': command.c:7964:16: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 7964 | } else if( *ptr=='[' ) | ^~ command.c:7967:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 7967 | if( len < MAXBUFFLEN-1 ) | ^~ command.c: At top level: command.c:902:12: warning: 'Define_Symbol' defined but not used [-Wunused-function] 902 | static int Define_Symbol(const char __far * string, const char __far * definition) { | ^~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o transfor.o transfor.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from transfor.c:198: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'SetVanWaalRadius': transfor.c:559:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 559 | if( (ptr->irad)+iProbeRad>MaxAtomRadius ) | ^~ transfor.c:561:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 561 | ptr->flag |= ExpandFlag; | ^~~ transfor.c:563:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 563 | if( ptr->irad>MaxAtomRadius ) | ^~ transfor.c:565:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 565 | ptr->flag &= ~ExpandFlag; | ^~~ transfor.c: In function 'ColourPointAttrib': transfor.c:2282:33: warning: variable 'result' set but not used [-Wunused-but-set-variable] 2282 | register int i,shade,nshade,result; | ^~~~~~ transfor.c: In function 'StructColourAttrib': transfor.c:3064:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 3064 | if( !Database ) | ^~ transfor.c:3066:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 3066 | ColourBondNone(); | ^~~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o render.o render.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from render.c:189: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ render.c: In function 'PickAtoms': render.c:2076:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2076 | if( !QAtom ) | ^~ render.c:2079:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2079 | if( PickMode==PickCentr && shift ) | ^~ render.c:2173:15: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 2173 | } else | ^~~~ render.c:2175:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 2175 | QAtom->label = label; | ^~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o repres.o repres.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from repres.c:234: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ repres.c: In function 'TestSolventDot': repres.c:987:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 987 | if( lx < 0 ) lx = 0; if( ux >= VOXORDER ) ux = VOXORDER-1; | ^~ repres.c:987:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 987 | if( lx < 0 ) lx = 0; if( ux >= VOXORDER ) ux = VOXORDER-1; | ^~ repres.c:988:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 988 | if( ly < 0 ) ly = 0; if( uy >= VOXORDER ) uy = VOXORDER-1; | ^~ repres.c:988:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 988 | if( ly < 0 ) ly = 0; if( uy >= VOXORDER ) uy = VOXORDER-1; | ^~ repres.c:989:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 989 | if( lz < 0 ) lz = 0; if( uz >= VOXORDER ) uz = VOXORDER-1; | ^~ repres.c:989:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 989 | if( lz < 0 ) lz = 0; if( uz >= VOXORDER ) uz = VOXORDER-1; | ^~ repres.c: In function 'CalculateSurface': repres.c:1113:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1113 | if( !Database ) | ^~ repres.c:1116:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1116 | DotCount = density; | ^~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o pixutils.o pixutils.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from pixutils.c:183: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ pixutils.c: In function 'ClipDashLine': pixutils.c:645:23: warning: variable 'ca' set but not used [-Wunused-but-set-variable] 645 | register Pixel c, ca, mid; | ^~ pixutils.c: In function 'DrawCircle': pixutils.c:2606:13: warning: variable 'updown' set but not used [-Wunused-but-set-variable] 2606 | int updown, ifirst; | ^~~~~~ pixutils.c: In function 'DrawCylinderCaps': pixutils.c:2986:21: warning: variable 'alts' set but not used [-Wunused-but-set-variable] 2986 | register int p, alts, altc; | ^~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o outfile.o outfile.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from outfile.c:170: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteVectDots': outfile.c:1998:24: warning: variable 'tump' set but not used [-Wunused-but-set-variable] 1998 | register int temp, tump; | ^~~~ outfile.c:1998:18: warning: variable 'temp' set but not used [-Wunused-but-set-variable] 1998 | register int temp, tump; | ^~~~ outfile.c: In function 'WriteVectMapPoints': outfile.c:2038:24: warning: variable 'tump' set but not used [-Wunused-but-set-variable] 2038 | register int temp, tump; | ^~~~ outfile.c:2038:18: warning: variable 'temp' set but not used [-Wunused-but-set-variable] 2038 | register int temp, tump; | ^~~~ outfile.c: In function 'R3DSphere': outfile.c:2601:31: warning: variable 'z1' set but not used [-Wunused-but-set-variable] 2601 | register Real x1, y1, z1; /* coordinates after rotation and translation*/ | ^~ outfile.c:2601:27: warning: variable 'y1' set but not used [-Wunused-but-set-variable] 2601 | register Real x1, y1, z1; /* coordinates after rotation and translation*/ | ^~ outfile.c:2601:23: warning: variable 'x1' set but not used [-Wunused-but-set-variable] 2601 | register Real x1, y1, z1; /* coordinates after rotation and translation*/ | ^~ outfile.c: In function 'R3DStrandRibbon': outfile.c:2956:28: warning: variable 'qsz' set but not used [-Wunused-but-set-variable] 2956 | register int qsx, qsy, qsz; | ^~~ outfile.c: At top level: outfile.c:2082:13: warning: 'WriteVectMapBonds' defined but not used [-Wunused-function] 2082 | static void WriteVectMapBonds( void) { | ^~~~~~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o script.o script.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from script.c:164: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ script.c:2342:13: warning: 'WriteVRMLLine' defined but not used [-Wunused-function] 2342 | static void WriteVRMLLine( int src, int dst, int shade, int *flag ) | ^~~~~~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o infile.o infile.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from infile.c:196: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ infile.c: In function 'ApplyBondInfo': infile.c:671:14: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 671 | for(aptr2=group2->alist; aptr2; aptr2=aptr2->anext) | ^~~ infile.c:696:16: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 696 | if (AtomNum1) break; | ^~ infile.c: In function 'LoadXYZMolecule': infile.c:1365:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1365 | if( !FetchRecord(DataFile,Record) ) | ^~ infile.c:1367:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1367 | xpos = ypos = zpos = 0.0; | ^~~~ infile.c: In function 'LoadCIFMolecule': infile.c:2210:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2210 | if (!cif_datablock_name (cif, &dbname)) | ^~ infile.c:2212:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2212 | Info.moleculename[55] = '\0'; | ^~~~ infile.c:3232:13: warning: variable 'oNMRModel' set but not used [-Wunused-but-set-variable] 3232 | int oNMRModel; | ^~~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o tokens.o tokens.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_fract.o cif_fract.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cif_fract.c:197: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif.o cif.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cif.c:278: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ cif.c: In function 'cif_read_file': cif.c:344:17: warning: pointer 'ciftmp_32' may be used after 'free' [-Wuse-after-free] 344 | sprintf(buffer,"Failed to write %s.\n", ciftmp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rasmol.h:260:20: note: call to 'free' here 260 | #define _ffree free cif.c:336:17: warning: pointer 'ciftmp_32' may be used after 'free' [-Wuse-after-free] 336 | sprintf(buffer,"Failed to write %s.\n", ciftmp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rasmol.h:260:20: note: call to 'free' here 260 | #define _ffree free cif.c:330:17: warning: pointer 'ciftmp_32' may be used after 'free' [-Wuse-after-free] 330 | sprintf(buffer,"Failed to write %s.\n", ciftmp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rasmol.h:260:20: note: call to 'free' here 260 | #define _ffree free gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_ctonum.o cif_ctonum.c cif_ctonum.c:198:9: warning: "_USE_RASMOL_H_" redefined 198 | #define _USE_RASMOL_H_ | ^~~~~~~~~~~~~~ : note: this is the location of the previous definition In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from cif_ctonum.c:200: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o cif_stx.o cif_stx.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from cif_stx.c:227: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o multiple.o multiple.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from multiple.c:225: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o vector.o vector.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from vector.c:159: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o wbrotate.o wbrotate.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from rasmol.h:163, from wbrotate.c:201: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from langsel_unix.c:114: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ langsel_unix.c: In function 'SwitchLang': langsel_unix.c:2347:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2347 | if (Interactive) | ^~ langsel_unix.c:2349:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2349 | if (Language != lang) { | ^~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o maps.o maps.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from maps.c:81: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ maps.c: In function 'SaveMapFile': maps.c:401:13: warning: the comparison will always evaluate as 'true' for the address of 'identcode' will never be NULL [-Waddress] 401 | if (Info.identcode && *Info.identcode) { | ^~~~ In file included from maps.c:88: molecule.h:422:14: note: 'identcode' declared here 422 | char identcode[80]; | ^~~~~~~~~ maps.c:429:55: warning: variable 'fcmapmask_zbase' set but not used [-Wunused-but-set-variable] 429 | double fcmapmask_xbase=0., fcmapmask_ybase=0, fcmapmask_zbase=0.; | ^~~~~~~~~~~~~~~ maps.c:429:36: warning: variable 'fcmapmask_ybase' set but not used [-Wunused-but-set-variable] 429 | double fcmapmask_xbase=0., fcmapmask_ybase=0, fcmapmask_zbase=0.; | ^~~~~~~~~~~~~~~ maps.c:429:16: warning: variable 'fcmapmask_xbase' set but not used [-Wunused-but-set-variable] 429 | double fcmapmask_xbase=0., fcmapmask_ybase=0, fcmapmask_zbase=0.; | ^~~~~~~~~~~~~~~ maps.c:428:48: warning: variable 'fcmap_zbase' set but not used [-Wunused-but-set-variable] 428 | double fcmap_xbase=0., fcmap_ybase=0., fcmap_zbase=0.; | ^~~~~~~~~~~ maps.c:428:32: warning: variable 'fcmap_ybase' set but not used [-Wunused-but-set-variable] 428 | double fcmap_xbase=0., fcmap_ybase=0., fcmap_zbase=0.; | ^~~~~~~~~~~ maps.c:428:16: warning: variable 'fcmap_xbase' set but not used [-Wunused-but-set-variable] 428 | double fcmap_xbase=0., fcmap_ybase=0., fcmap_zbase=0.; | ^~~~~~~~~~~ maps.c: In function 'LoadCBFMapFile': maps.c:1940:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1940 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1940:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1940 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1945:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1945 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1945:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1945 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1950:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1950 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1950:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1950 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1955:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1955 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1955:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1955 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1966:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1966 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1966:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1966 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1976:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1976 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1976:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1976 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1981:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1981 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1981:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1981 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1986:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1986 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1986:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1986 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:1991:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1991 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1991:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1991 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:2001:15: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2001 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2001:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2001 | if (mask) _ffree(mask); return CBF_FORMAT; | ^~~~~~ maps.c:2023:11: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2023 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2023:33: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2023 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2093:11: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2093 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:2093:33: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 2093 | if (map) _ffree(map); if (mask) _ffree(mask); return CBF_FORMAT; | ^~ maps.c:1758:12: warning: variable 'fcmapmask_xbase' set but not used [-Wunused-but-set-variable] 1758 | double fcmapmask_xbase, fcmapmask_ybase, fcmapmask_zbase; | ^~~~~~~~~~~~~~~ maps.c:1757:12: warning: variable 'fcmap_xbase' set but not used [-Wunused-but-set-variable] 1757 | double fcmap_xbase, fcmap_ybase, fcmap_zbase; | ^~~~~~~~~~~ maps.c:1756:12: warning: variable 'ocmapmask_xbase' set but not used [-Wunused-but-set-variable] 1756 | double ocmapmask_xbase, ocmapmask_ybase, ocmapmask_zbase; | ^~~~~~~~~~~~~~~ maps.c:1755:12: warning: variable 'ocmap_xbase' set but not used [-Wunused-but-set-variable] 1755 | double ocmap_xbase, ocmap_ybase, ocmap_zbase; | ^~~~~~~~~~~ maps.c:1754:12: warning: variable 'mapmask_xbase' set but not used [-Wunused-but-set-variable] 1754 | Long mapmask_xbase, mapmask_ybase, mapmask_zbase; | ^~~~~~~~~~~~~ maps.c:1753:12: warning: variable 'map_xbase' set but not used [-Wunused-but-set-variable] 1753 | Long map_xbase, map_ybase, map_zbase; | ^~~~~~~~~ maps.c: In function 'LoadCCP4MapFile': maps.c:2988:9: warning: variable 'rawelsize' set but not used [-Wunused-but-set-variable] 2988 | int rawelsize; | ^~~~~~~~~ In file included from maps.c:96: maps.c: In function 'map_points': maps.c:4575:42: warning: the address of 'gradient' will always evaluate as 'true' [-Waddress] 4575 | MapPointm2o(map,mp,gradient); | ^~~~~~~~ maps.h:187:10: note: in definition of macro 'MapPointm2o' 187 | if (gradient) { \ | ^~~~~~~~ maps.c:4399:12: warning: variable 'koffsets' set but not used [-Wunused-but-set-variable] 4399 | Long koffsets[3][2]; /* The offsets back to the prior cells */ | ^~~~~~~~ maps.c:4398:11: warning: variable 'odirs' set but not used [-Wunused-but-set-variable] 4398 | int odirs[3][2]; /* {Y,Z}, {Z,X}, {X,Y} */ | ^~~~~ maps.c:4396:39: warning: variable 'havebody' set but not used [-Wunused-but-set-variable] 4396 | int haveedges[3], havefaces[3], havebody; | ^~~~~~~~ gcc -m32 -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -I/usr/include -I/usr/include -Dlinux -D__i386__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/lib/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I@GENTOO_PORTAGE_EPREFIX@/usr/include -I@GENTOO_PORTAGE_EPREFIX@/usr/include/cbflib -c -o x11win.o x11win.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:232: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ rm -f rasmol gcc -m32 -o rasmol -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -fno-strength-reduce -fno-strict-aliasing -pipe -L/usr/lib -L/usr/lib rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o x11win.o -lm -lXi -lXext -lX11 -lcbf -lCQRlib -lCVector -lCNearTree -lgfortran transfor.c: In function 'ScaleColourMap': transfor.c:1702:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 1702 | { ScaleRef[i].r = 0; | ^ transfor.h:284:10: note: at offset 252 into destination object 'ScaleRef' of size 248 284 | ShadeRef ScaleRef[LastShade]; | ^ transfor.c:1704:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1704 | ScaleRef[i].b = 255; | ^ transfor.h:284:10: note: at offset 254 into destination object 'ScaleRef' of size 248 284 | ShadeRef ScaleRef[LastShade]; | ^ infile.c: In function 'ConvertNames.constprop': infile.c:2079:5: warning: '__builtin___strcpy_chk' writing between 6 and 2147483646 bytes into a region of size 5 [-Wstringop-overflow=] 2079 | strcpy(tmparg,label_atom_id); | ^ infile.c:2057:16: note: destination object 'tmparg' of size 5 2057 | char __far tmparg[5]; | ^ make: Leaving directory '/usr/src/RPM/BUILD/RasMol-2.7.5.2/src' + mv rasmol rasmol-32bpp + popd ~/RPM/BUILD/RasMol-2.7.5.2 + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.78667 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/RasMol-buildroot + : + /bin/rm -rf -- /usr/src/tmp/RasMol-buildroot + PATH=/usr/libexec/rpm-build:/usr/src/bin:/usr/bin:/bin:/usr/local/bin:/usr/games + cd RasMol-2.7.5.2 + find -type f -name .DS_Store -execdir rm '{}' + + install -pDm755 /usr/src/RPM/SOURCES/rasmol.sh /usr/src/tmp/RasMol-buildroot/usr/bin/rasmol + install -pm755 src/rasmol-8bpp /usr/src/tmp/RasMol-buildroot/usr/bin/rasmol-8bpp + install -pm755 src/rasmol-16bpp /usr/src/tmp/RasMol-buildroot/usr/bin/rasmol-16bpp + install -pm755 src/rasmol-32bpp /usr/src/tmp/RasMol-buildroot/usr/bin/rasmol-32bpp + mkdir -p /usr/src/tmp/RasMol-buildroot/usr/share/RasMol /usr/src/tmp/RasMol-buildroot/usr/share/man/man1/ + install -pm644 doc/rasmol.1.gz /usr/src/tmp/RasMol-buildroot/usr/share/man/man1/rasmol.1.gz + install -pm644 doc/rasmol.hlp /usr/src/tmp/RasMol-buildroot/usr/share/RasMol/rasmol.hlp + install -pm644 doc/rasmol.html /usr/src/tmp/RasMol-buildroot/usr/share/RasMol/rasmol.html + pushd doc ~/RPM/BUILD/RasMol-2.7.5.2/doc ~/RPM/BUILD/RasMol-2.7.5.2 + rm rasmol.hlp rasmol.html rasmol.1.gz + mkdir doc + install -pm644 INSTALL.html NOTICE.html README.html esrasmol27.html esrasmol2721.html index.html manualA4.pdf.gz manualUS.pdf.gz refcardA4.pdf.gz refcardUS.pdf.gz manualA4.ps.gz manualUS.ps.gz refcardA4.ps.gz refcardUS.ps.gz manualA4.rtf.gz manualUS.rtf.gz raswin.rtf.gz refcardA4.rtf.gz refcardUS.rtf.gz rasmol.doc.gz doc/ + mkdir examples + popd ~/RPM/BUILD/RasMol-2.7.5.2 + mv data/1crn.pdb data/1gpd.pdb.gz data/1ldb.pdb.gz data/1ldm.pdb.gz data/3cro.pdb data/4hir.ent.gz data/4ins.CIF data/7lyz.pdb data/IUCR9800028.cif data/RSML_fixup.csh data/asprin.alc data/pdb2mcg.ent doc/examples/ + install -pDm644 /usr/src/RPM/SOURCES/rasmol.xpm /usr/src/tmp/RasMol-buildroot/usr/share/icons/hicolor/32x32/apps/rasmol.xpm + install -pDm644 /usr/src/RPM/SOURCES/rasmol_16x14.png /usr/src/tmp/RasMol-buildroot/usr/share/icons/hicolor/16x16/apps/rasmol.png + install -pDm644 /usr/src/RPM/SOURCES/rasmol_32x29.png /usr/src/tmp/RasMol-buildroot/usr/share/icons/hicolor/32x32/apps/rasmol.png + install -pDm644 /usr/src/RPM/SOURCES/rasmol_64x58.png /usr/src/tmp/RasMol-buildroot/usr/share/icons/hicolor/64x64/apps/rasmol.png + install -pDm644 /usr/src/RPM/SOURCES/rasmol.desktop /usr/src/tmp/RasMol-buildroot/usr/share/applications/RasMol.desktop + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/RasMol-buildroot (auto) Verifying and fixing files in /usr/src/tmp/RasMol-buildroot (binconfig,pkgconfig,libtool,desktop,gnuconfig) Checking contents of files in /usr/src/tmp/RasMol-buildroot/ (default) Compressing files in /usr/src/tmp/RasMol-buildroot (auto) Verifying ELF objects in /usr/src/tmp/RasMol-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Splitting links to aliased files under /{,s}bin in /usr/src/tmp/RasMol-buildroot Processing files: RasMol-2.7.5.2-alt7 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.10105 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd RasMol-2.7.5.2 + DOCDIR=/usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2 + export DOCDIR + rm -rf /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2 + /bin/mkdir -p /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2 + cp -prL doc/ /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2 + chmod -R go-w /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2 + chmod -R a+rX /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2 + cp -prL NOTICE PROJECTS RASLIC README.html README.shtml README.txt INSTALL INSTALL.html TODO.html TODO.txt ChangeLog ChangeLog.html ChangeLog.txt history.html /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2 + chmod -R go-w /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2 + chmod -R a+rX /usr/src/tmp/RasMol-buildroot/usr/share/doc/RasMol-2.7.5.2 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.BwQ12B find-provides: running scripts (debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.e0wwZV find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services) Provides: rasmol = 2.7.5.2-alt7 Requires: fonts-bitmap-75dpi, fonts-bitmap-cyr_rfx-cp1251-75dpi, xdpyinfo, /bin/sh, /lib/ld-linux.so.2, libCNearTree.so.7 >= set:jfy8eX61ZJ5rZ4xDtOoY3Ofm, libCQRlib.so.2 >= set:jhBWnjL0, libCVector-1.0.3.so.2 >= set:hfsOoCd, libX11.so.6 >= set:ohc6fbkxsesVSZD9TAWJZxFUMYKZF7XZFHoAwZoYIZ2TYjO5aoG8X4Ct9JQyRnIXmV2F0aHbK2ZEIMkiMh7yzkXHE6SFl6Ha4Znpd3lnVtPcXGZBdges21HaRZJR0gURRPSLYLM70RcAA80Vgr3LUciiZbdtHCjMHh3JmZsZmA0wfU8Z8CaFM9ckOPvlJQeQ8HE5AmdIcwyk5PhmNA2U1e, libXext.so.6 >= set:li6tHmY7qME5J7, libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.15), libc.so.6(GLIBC_2.2), libc.so.6(GLIBC_2.3), libc.so.6(GLIBC_2.3.4), libc.so.6(GLIBC_2.34), libc.so.6(GLIBC_2.38), libc.so.6(GLIBC_2.4), libc.so.6(GLIBC_2.7), libcbf.so.0 >= set:nhij0GYBa6O0x4WIjboz5OU4ATPkFBqBcbzYg8P0ecxUzu3yNivD0dJUmrTQFZ7ZKL0g0Njm3mBpemz9qh1jta3BdIxPLMksDf0UwsKp15JkFisAQRQfEn, libm.so.6(GLIBC_2.0), libm.so.6(GLIBC_2.1), libm.so.6(GLIBC_2.29), rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.48ZVDc Creating RasMol-debuginfo package Processing files: RasMol-debuginfo-2.7.5.2-alt7 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.lYh8WS find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.anCjHl find-requires: running scripts (debuginfo) Requires: RasMol = 2.7.5.2-alt7, /usr/lib/debug/lib/ld-linux.so.2.debug, debug(libCNearTree.so.7), debug(libCQRlib.so.2), debug(libCVector-1.0.3.so.2), debug(libX11.so.6), debug(libXext.so.6), debug(libc.so.6), debug(libcbf.so.0), debug(libm.so.6) Adding to RasMol-debuginfo a strict dependency on RasMol Wrote: /usr/src/RPM/RPMS/i586/RasMol-2.7.5.2-alt7.i586.rpm (w2T16.xzdio) Wrote: /usr/src/RPM/RPMS/i586/RasMol-debuginfo-2.7.5.2-alt7.i586.rpm (w2.lzdio) 83.69user 7.81system 0:29.91elapsed 305%CPU (0avgtext+0avgdata 102668maxresident)k 0inputs+0outputs (0major+1521504minor)pagefaults 0swaps 3.35user 2.76system 0:43.02elapsed 14%CPU (0avgtext+0avgdata 130188maxresident)k 2352inputs+0outputs (0major+203627minor)pagefaults 0swaps --- RasMol-2.7.5.2-alt7.i586.rpm.repo 2023-06-29 08:35:39.000000000 +0000 +++ RasMol-2.7.5.2-alt7.i586.rpm.hasher 2024-12-21 08:42:47.094366682 +0000 @@ -142,2 +142,3 @@ Requires: libc.so.6(GLIBC_2.34) +Requires: libc.so.6(GLIBC_2.38) Requires: libc.so.6(GLIBC_2.4) @@ -153,5 +154,5 @@ File: /usr/bin/rasmol 100755 root:root 0a6fbafc8996fc169efab77b707322a4 -File: /usr/bin/rasmol-16bpp 100755 root:root 10098199392a58a832ae330b460a728c -File: /usr/bin/rasmol-32bpp 100755 root:root 9140f6f19df4d5dd17bc4a222b033153 -File: /usr/bin/rasmol-8bpp 100755 root:root 5fabeb603e5b6b11ed42ad6c8348865a +File: /usr/bin/rasmol-16bpp 100755 root:root 143677ef30b7f56e61f2de4302528a3f +File: /usr/bin/rasmol-32bpp 100755 root:root 1ccb6e863dce77b5feee19644eec65ab +File: /usr/bin/rasmol-8bpp 100755 root:root 9fe1170f0630fc0db27ffe4d17c3eb74 File: /usr/share/RasMol 40755 root:root @@ -275,2 +276,2 @@ File: /usr/share/man/man1/rasmol.1.xz 100644 root:root 9b73f54ed473f9c627909b8ca5350c71 -RPMIdentity: c9769b822fa93bac08c84a2751221b25207f9dbc9f88c8ed6ae56d395ba1501f06850f718c5ce393716d8cf06013cbbb8e09bdf0b5b67c594462b04710d7edef +RPMIdentity: b7a450239161a09f79aaab7be3ac7af5ab6d6c8df0be92be289260eb73d13e74531a13fc4262af831fb22f603f32877340f4ce5a41b7c26a4b9ff9144cee351c --- RasMol-debuginfo-2.7.5.2-alt7.i586.rpm.repo 2023-06-29 08:35:39.000000000 +0000 +++ RasMol-debuginfo-2.7.5.2-alt7.i586.rpm.hasher 2024-12-21 08:42:47.293369715 +0000 @@ -1,10 +1,10 @@ -/usr/lib/debug/.build-id/62 40755 root:root -/usr/lib/debug/.build-id/62/e3aac10b7c72d3637f5bc0514bbc6eec05388e 120777 root:root ../../../../bin/rasmol-8bpp -/usr/lib/debug/.build-id/62/e3aac10b7c72d3637f5bc0514bbc6eec05388e.debug 120777 root:root ../../usr/bin/rasmol-8bpp.debug -/usr/lib/debug/.build-id/ab 40755 root:root -/usr/lib/debug/.build-id/ab/15e256f100eef0dc4a81da5c6198b8ba5a6d69 120777 root:root ../../../../bin/rasmol-16bpp -/usr/lib/debug/.build-id/ab/15e256f100eef0dc4a81da5c6198b8ba5a6d69.debug 120777 root:root ../../usr/bin/rasmol-16bpp.debug -/usr/lib/debug/.build-id/d0 40755 root:root -/usr/lib/debug/.build-id/d0/9b54a1df99f2381cfab1a52ef6a1ad28f227c9 120777 root:root ../../../../bin/rasmol-32bpp -/usr/lib/debug/.build-id/d0/9b54a1df99f2381cfab1a52ef6a1ad28f227c9.debug 120777 root:root ../../usr/bin/rasmol-32bpp.debug +/usr/lib/debug/.build-id/3d 40755 root:root +/usr/lib/debug/.build-id/3d/683699b7a6178c3241be50c0d823ca75b3c317 120777 root:root ../../../../bin/rasmol-16bpp +/usr/lib/debug/.build-id/3d/683699b7a6178c3241be50c0d823ca75b3c317.debug 120777 root:root ../../usr/bin/rasmol-16bpp.debug +/usr/lib/debug/.build-id/da 40755 root:root +/usr/lib/debug/.build-id/da/2a9b00249b77c361ff884f4be3c2ef4e85a566 120777 root:root ../../../../bin/rasmol-8bpp +/usr/lib/debug/.build-id/da/2a9b00249b77c361ff884f4be3c2ef4e85a566.debug 120777 root:root ../../usr/bin/rasmol-8bpp.debug +/usr/lib/debug/.build-id/ea 40755 root:root +/usr/lib/debug/.build-id/ea/6acbc005b9514043ca118a97b97b6d5779f807 120777 root:root ../../../../bin/rasmol-32bpp +/usr/lib/debug/.build-id/ea/6acbc005b9514043ca118a97b97b6d5779f807.debug 120777 root:root ../../usr/bin/rasmol-32bpp.debug /usr/lib/debug/usr/bin/rasmol-16bpp.debug 100644 root:root @@ -73,14 +73,14 @@ Provides: RasMol-debuginfo = 2.7.5.2-alt7:sisyphus+323875.100.1.1 -File: /usr/lib/debug/.build-id/62 40755 root:root -File: /usr/lib/debug/.build-id/62/e3aac10b7c72d3637f5bc0514bbc6eec05388e 120777 root:root ../../../../bin/rasmol-8bpp -File: /usr/lib/debug/.build-id/62/e3aac10b7c72d3637f5bc0514bbc6eec05388e.debug 120777 root:root ../../usr/bin/rasmol-8bpp.debug -File: /usr/lib/debug/.build-id/ab 40755 root:root -File: /usr/lib/debug/.build-id/ab/15e256f100eef0dc4a81da5c6198b8ba5a6d69 120777 root:root ../../../../bin/rasmol-16bpp -File: /usr/lib/debug/.build-id/ab/15e256f100eef0dc4a81da5c6198b8ba5a6d69.debug 120777 root:root ../../usr/bin/rasmol-16bpp.debug -File: /usr/lib/debug/.build-id/d0 40755 root:root -File: /usr/lib/debug/.build-id/d0/9b54a1df99f2381cfab1a52ef6a1ad28f227c9 120777 root:root ../../../../bin/rasmol-32bpp -File: /usr/lib/debug/.build-id/d0/9b54a1df99f2381cfab1a52ef6a1ad28f227c9.debug 120777 root:root ../../usr/bin/rasmol-32bpp.debug -File: /usr/lib/debug/usr/bin/rasmol-16bpp.debug 100644 root:root b668fdf9cc6d008fce74b2477b01543d -File: /usr/lib/debug/usr/bin/rasmol-32bpp.debug 100644 root:root f878d4a3c776ec23192fd01e37fab40d -File: /usr/lib/debug/usr/bin/rasmol-8bpp.debug 100644 root:root 4348b2e35c4ba647fe1eafd8191a1a80 +File: /usr/lib/debug/.build-id/3d 40755 root:root +File: /usr/lib/debug/.build-id/3d/683699b7a6178c3241be50c0d823ca75b3c317 120777 root:root ../../../../bin/rasmol-16bpp +File: /usr/lib/debug/.build-id/3d/683699b7a6178c3241be50c0d823ca75b3c317.debug 120777 root:root ../../usr/bin/rasmol-16bpp.debug +File: /usr/lib/debug/.build-id/da 40755 root:root +File: /usr/lib/debug/.build-id/da/2a9b00249b77c361ff884f4be3c2ef4e85a566 120777 root:root ../../../../bin/rasmol-8bpp +File: /usr/lib/debug/.build-id/da/2a9b00249b77c361ff884f4be3c2ef4e85a566.debug 120777 root:root ../../usr/bin/rasmol-8bpp.debug +File: /usr/lib/debug/.build-id/ea 40755 root:root +File: /usr/lib/debug/.build-id/ea/6acbc005b9514043ca118a97b97b6d5779f807 120777 root:root ../../../../bin/rasmol-32bpp +File: /usr/lib/debug/.build-id/ea/6acbc005b9514043ca118a97b97b6d5779f807.debug 120777 root:root ../../usr/bin/rasmol-32bpp.debug +File: 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