<86>Jun 8 05:49:15 userdel[1361687]: delete user 'rooter' <86>Jun 8 05:49:15 userdel[1361687]: removed group 'rooter' owned by 'rooter' <86>Jun 8 05:49:15 userdel[1361687]: removed shadow group 'rooter' owned by 'rooter' <86>Jun 8 05:49:15 groupadd[1361775]: group added to /etc/group: name=rooter, GID=1226 <86>Jun 8 05:49:15 groupadd[1361775]: group added to /etc/gshadow: name=rooter <86>Jun 8 05:49:15 groupadd[1361775]: new group: name=rooter, GID=1226 <86>Jun 8 05:49:15 useradd[1361824]: new user: name=rooter, UID=1226, GID=1226, home=/root, shell=/bin/bash, from=none <86>Jun 8 05:49:15 userdel[1361880]: delete user 'builder' <86>Jun 8 05:49:15 userdel[1361880]: removed group 'builder' owned by 'builder' <86>Jun 8 05:49:15 userdel[1361880]: removed shadow group 'builder' owned by 'builder' <86>Jun 8 05:49:15 groupadd[1361948]: group added to /etc/group: name=builder, GID=1227 <86>Jun 8 05:49:15 groupadd[1361948]: group added to /etc/gshadow: name=builder <86>Jun 8 05:49:15 groupadd[1361948]: new group: name=builder, GID=1227 <86>Jun 8 05:49:15 useradd[1362015]: new user: name=builder, UID=1227, GID=1227, home=/usr/src, shell=/bin/bash, from=none <13>Jun 8 05:49:21 rpmi: libpcre16-8.45-alt2 sisyphus+283722.100.1.2 1629848216 installed <13>Jun 8 05:49:21 rpmi: libpcre3-8.45-alt2 sisyphus+283722.100.1.2 1629848216 installed <13>Jun 8 05:49:21 rpmi: libreadline7-7.0.3-alt5 sisyphus+328858.200.1.1 1694010663 installed <13>Jun 8 05:49:21 rpmi: pcretest-8.45-alt2 sisyphus+283722.100.1.2 1629848216 installed <13>Jun 8 05:49:21 rpmi: libpcre-devel-8.45-alt2 sisyphus+283722.100.1.2 1629848216 installed <13>Jun 8 05:49:21 rpmi: zlib-devel-1.3.1-alt1 sisyphus+342532.100.1.1 1710232285 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/fastq-tools-0.8.3-alt1.nosrc.rpm (w1.gzdio) Installing fastq-tools-0.8.3-alt1.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.63640 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf fastq-tools-0.8.3 + echo 'Source #0 (fastq-tools-0.8.3.tar):' Source #0 (fastq-tools-0.8.3.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/fastq-tools-0.8.3.tar + cd fastq-tools-0.8.3 + /bin/chmod -c -Rf u+rwX,go-w . + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.63640 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd fastq-tools-0.8.3 + autoreconf -fisv autoreconf-default: export WARNINGS= autoreconf-default: Entering directory '.' autoreconf-default: configure.ac: not using Gettext autoreconf-default: running: aclocal --force -I m4 autoreconf-default: configure.ac: tracing autoreconf-default: running: libtoolize --force --install libtoolize-default: putting auxiliary files in '.'. libtoolize-default: linking file './config.guess' libtoolize-default: linking file './config.sub' libtoolize-default: linking file './install-sh' libtoolize-default: linking file './ltmain.sh' libtoolize-default: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize-default: linking file 'm4/libtool.m4' libtoolize-default: linking file 'm4/ltoptions.m4' libtoolize-default: linking file 'm4/ltsugar.m4' libtoolize-default: linking file 'm4/ltversion.m4' libtoolize-default: linking file 'm4/lt~obsolete.m4' autoreconf-default: configure.ac: not using Intltool autoreconf-default: configure.ac: not using Gtkdoc autoreconf-default: running: aclocal --force -I m4 autoreconf-default: running: /usr/bin/autoconf-2.71 --force configure.ac:34: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:34: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:34: the top level autoreconf-default: configure.ac: not using Autoheader autoreconf-default: running: automake --add-missing --force-missing configure.ac:7: installing './compile' configure.ac:4: installing './missing' src/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' autoreconf-default: Leaving directory '.' + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic' + export FFLAGS + FCFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic' + export FCFLAGS + '[' -n '' ']' ++ printf %s '-pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS=' -march=i586 -mtune=generic' + export ASFLAGS + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + xargs -ri dirname -- '{}' + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + configure_runstatedir_flags= + grep -qF runstatedir=DIR ./configure + configure_runstatedir_flags=--runstatedir=/var/run + ./configure --build=i586-alt-linux --host=i586-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --disable-silent-rules --runstatedir=/var/run --without-included-gettext configure: WARNING: unrecognized options: --without-included-gettext checking for a BSD-compatible install... /usr/bin/ginstall -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether make supports the include directive... yes (GNU style) checking for i586-alt-linux-gcc... i586-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether i586-alt-linux-gcc accepts -g... yes checking for i586-alt-linux-gcc option to enable C11 features... none needed checking whether i586-alt-linux-gcc understands -c and -o together... yes checking dependency style of i586-alt-linux-gcc... none checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... 64 checking for i586-alt-linux-gcc... (cached) i586-alt-linux-gcc checking whether the compiler supports GNU C... (cached) yes checking whether i586-alt-linux-gcc accepts -g... (cached) yes checking for i586-alt-linux-gcc option to enable C11 features... (cached) none needed checking whether i586-alt-linux-gcc understands -c and -o together... (cached) yes checking dependency style of i586-alt-linux-gcc... (cached) none checking for uint8_t... yes checking for uint16_t... yes checking for int32_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for size_t... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking build system type... i586-alt-linux-gnu checking host system type... i586-alt-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by i586-alt-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i586-alt-linux-gnu file names to i586-alt-linux-gnu format... func_convert_file_noop checking how to convert i586-alt-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for i586-alt-linux-file... no checking for file... file checking for i586-alt-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... (cached) pass_all checking for i586-alt-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for i586-alt-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for i586-alt-linux-strip... no checking for strip... strip checking for i586-alt-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from i586-alt-linux-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for i586-alt-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if i586-alt-linux-gcc supports -fno-rtti -fno-exceptions... no checking for i586-alt-linux-gcc option to produce PIC... -fPIC -DPIC checking if i586-alt-linux-gcc PIC flag -fPIC -DPIC works... yes checking if i586-alt-linux-gcc static flag -static works... no checking if i586-alt-linux-gcc supports -c -o file.o... yes checking if i586-alt-linux-gcc supports -c -o file.o... (cached) yes checking whether the i586-alt-linux-gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for mkstemp... yes checking for fileno... yes checking for pcre-config... yes checking for getopt.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating doc/Makefile config.status: creating src/version.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --without-included-gettext + make -j8 Making all in src make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o parse.o parse.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o sw.o sw.c sw.c:40:18: warning: 'sw_mat70_d' defined but not used [-Wunused-const-variable=] 40 | static const int sw_mat70_d[25] = | ^~~~~~~~~~ sw.c:33:18: warning: 'sw_mat50_d' defined but not used [-Wunused-const-variable=] 33 | static const int sw_mat50_d[25] = | ^~~~~~~~~~ make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o fastq-grep.o fastq-grep.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o fastq-match.o fastq-match.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o common.o common.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o fastq-kmers.o fastq-kmers.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o fastq-qual.o fastq-qual.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 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-DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o hash_table.o hash_table.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 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-DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o fastq-sample.o fastq-sample.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o fastq-qualadj.o fastq-qualadj.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o fastq-sort.o fastq-sort.c make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-grep fastq-grep.o common.o parse.o -lpcre -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-grep fastq-grep.o common.o parse.o -lpcre -lm make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-qscale fastq-qscale.o common.o parse.o -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-qscale fastq-qscale.o common.o parse.o -lm make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-qual fastq-qual.o common.o parse.o -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-qual fastq-qual.o common.o parse.o -lm make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-qualadj fastq-qualadj.o common.o parse.o -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-qualadj fastq-qualadj.o common.o parse.o -lm make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-match fastq-match.o common.o parse.o sw.o -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-match fastq-match.o common.o parse.o sw.o -lm make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-kmers fastq-kmers.o common.o parse.o -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-kmers fastq-kmers.o common.o parse.o -lm make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-uniq fastq-uniq.o common.o parse.o hash_table.o -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-uniq fastq-uniq.o common.o parse.o hash_table.o -lm make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-sample fastq-sample.o common.o parse.o rng.o -lm -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-sample fastq-sample.o common.o parse.o rng.o -lm make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-sort fastq-sort.o common.o parse.o -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o fastq-sort fastq-sort.o common.o parse.o -lm make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' Making all in tests make[1]: Nothing to be done for 'all'. Making all in doc make[1]: Nothing to be done for 'all'. make[1]: Nothing to be done for 'all-am'. + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.65231 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/fastq-tools-buildroot + : + /bin/rm -rf -- /usr/src/tmp/fastq-tools-buildroot + PATH=/usr/libexec/rpm-build:/usr/src/bin:/usr/bin:/bin:/usr/local/bin:/usr/games + cd fastq-tools-0.8.3 + make 'INSTALL=/usr/libexec/rpm-build/install -p' install DESTDIR=/usr/src/tmp/fastq-tools-buildroot make: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3' Making install in src make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[2]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' /usr/bin/mkdir -p '/usr/src/tmp/fastq-tools-buildroot/usr/bin' /bin/sh ../libtool --mode=install /usr/libexec/rpm-build/install -p fastq-grep fastq-kmers fastq-match fastq-uniq fastq-qual fastq-sample fastq-qualadj fastq-sort fastq-qscale '/usr/src/tmp/fastq-tools-buildroot/usr/bin' libtool: install: /usr/libexec/rpm-build/install -p fastq-grep /usr/src/tmp/fastq-tools-buildroot/usr/bin/fastq-grep libtool: install: /usr/libexec/rpm-build/install -p fastq-kmers /usr/src/tmp/fastq-tools-buildroot/usr/bin/fastq-kmers libtool: install: /usr/libexec/rpm-build/install -p fastq-match /usr/src/tmp/fastq-tools-buildroot/usr/bin/fastq-match libtool: install: /usr/libexec/rpm-build/install -p fastq-uniq /usr/src/tmp/fastq-tools-buildroot/usr/bin/fastq-uniq libtool: install: /usr/libexec/rpm-build/install -p fastq-qual /usr/src/tmp/fastq-tools-buildroot/usr/bin/fastq-qual libtool: install: /usr/libexec/rpm-build/install -p fastq-sample /usr/src/tmp/fastq-tools-buildroot/usr/bin/fastq-sample libtool: install: /usr/libexec/rpm-build/install -p fastq-qualadj /usr/src/tmp/fastq-tools-buildroot/usr/bin/fastq-qualadj libtool: install: /usr/libexec/rpm-build/install -p fastq-sort /usr/src/tmp/fastq-tools-buildroot/usr/bin/fastq-sort libtool: install: /usr/libexec/rpm-build/install -p fastq-qscale /usr/src/tmp/fastq-tools-buildroot/usr/bin/fastq-qscale make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/src' Making install in tests make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' make[2]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' Making install in doc make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/doc' make[2]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/doc' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/usr/src/tmp/fastq-tools-buildroot/usr/share/man/man1' /usr/libexec/rpm-build/install -p -m 644 fastq-grep.1 fastq-kmers.1 fastq-match.1 fastq-uniq.1 fastq-sample.1 fastq-sort.1 fastq-qscale.1 '/usr/src/tmp/fastq-tools-buildroot/usr/share/man/man1' make[2]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/doc' make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/doc' make[1]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3' make[2]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3' make[1]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3' make: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3' + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/fastq-tools-buildroot (auto) Verifying and fixing files in /usr/src/tmp/fastq-tools-buildroot (binconfig,pkgconfig,libtool,desktop,gnuconfig) Checking contents of files in /usr/src/tmp/fastq-tools-buildroot/ (default) Compressing files in /usr/src/tmp/fastq-tools-buildroot (auto) Verifying ELF objects in /usr/src/tmp/fastq-tools-buildroot (arch=strict,fhs=strict,lfs=strict,lint=strict,rpath=strict,stack=strict,textrel=strict,unresolved=strict) Splitting links to aliased files under /{,s}bin in /usr/src/tmp/fastq-tools-buildroot Executing(%check): /bin/sh -e /usr/src/tmp/rpm-tmp.6847 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd fastq-tools-0.8.3 + PATH=/usr/src/tmp/fastq-tools-buildroot/usr/bin:/usr/src/bin:/usr/bin:/bin:/usr/local/bin:/usr/games + fastq-grep --version + grep -Fw 'fastq-grep (fastq-tools) 0.8.3' fastq-grep (fastq-tools) 0.8.3 + make -j8 check Making check in src make[1]: Nothing to be done for 'check'. Making check in tests make random_fastq cat_fastq make[2]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o random_fastq.o random_fastq.c make[2]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' make[2]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' i586-alt-linux-gcc -DPACKAGE_NAME=\"fastq-tools\" -DPACKAGE_TARNAME=\"fastq-tools\" -DPACKAGE_VERSION=\"0.8.3\" -DPACKAGE_STRING=\"fastq-tools\ 0.8.3\" -DPACKAGE_BUGREPORT=\"dcjones@cs.washington.edu\" -DPACKAGE_URL=\"\" -DPACKAGE=\"fastq-tools\" -DVERSION=\"0.8.3\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DSTDC_HEADERS=1 -D_ALL_SOURCE=1 -D_DARWIN_C_SOURCE=1 -D_GNU_SOURCE=1 -D_HPUX_ALT_XOPEN_SOCKET_API=1 -D_NETBSD_SOURCE=1 -D_OPENBSD_SOURCE=1 -D_POSIX_PTHREAD_SEMANTICS=1 -D__STDC_WANT_IEC_60559_ATTRIBS_EXT__=1 -D__STDC_WANT_IEC_60559_BFP_EXT__=1 -D__STDC_WANT_IEC_60559_DFP_EXT__=1 -D__STDC_WANT_IEC_60559_FUNCS_EXT__=1 -D__STDC_WANT_IEC_60559_TYPES_EXT__=1 -D__STDC_WANT_LIB_EXT2__=1 -D__STDC_WANT_MATH_SPEC_FUNCS__=1 -D_TANDEM_SOURCE=1 -D__EXTENSIONS__=1 -D_FILE_OFFSET_BITS=64 -DHAVE__BOOL=1 -DHAVE_STDBOOL_H=1 -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -c -o cat_fastq.o cat_fastq.c make[2]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' make[2]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o random_fastq random_fastq.o -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o random_fastq random_fastq.o -lm make[2]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' make[2]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' /bin/sh ../libtool --tag=CC --mode=link i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o cat_fastq cat_fastq.o -lm libtool: link: i586-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -flto=auto -march=i586 -mtune=generic -I/usr/include/pcre -o cat_fastq cat_fastq.o -lm make[2]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' make check-TESTS make[3]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' PASS: parse_fastq make[3]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' make[3]: Entering directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' ============================================================================ Testsuite summary for fastq-tools 0.8.3 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[3]: Leaving directory '/usr/src/RPM/BUILD/fastq-tools-0.8.3/tests' Making check in doc make[1]: Nothing to be done for 'check'. make[1]: Nothing to be done for 'check-am'. + echo -ne '@a:a\nAAA\n+\n000\n@b:b\nBBB\n+\n111\n@c:c\nCCC\n+\n222\n' + fastq-grep BBB abc + fastq-grep -v BBB abc + fastq-sort b ac + sha256sum --check abc: OK b: OK ac: OK + exit 0 Processing files: fastq-tools-0.8.3-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.17412 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd fastq-tools-0.8.3 + DOCDIR=/usr/src/tmp/fastq-tools-buildroot/usr/share/doc/fastq-tools + export DOCDIR + /bin/mkdir -p /usr/src/tmp/fastq-tools-buildroot/usr/share/doc/fastq-tools + cp -prL AUTHORS COPYING README.md /usr/src/tmp/fastq-tools-buildroot/usr/share/doc/fastq-tools + chmod -R go-w /usr/src/tmp/fastq-tools-buildroot/usr/share/doc/fastq-tools + chmod -R a+rX /usr/src/tmp/fastq-tools-buildroot/usr/share/doc/fastq-tools + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.670sVR find-provides: running scripts (debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.4weMV0 find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services) Requires: /lib/ld-linux.so.2, libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.2), libc.so.6(GLIBC_2.3), libc.so.6(GLIBC_2.3.4), libc.so.6(GLIBC_2.34), libc.so.6(GLIBC_2.38), libc.so.6(GLIBC_2.4), libm.so.6(GLIBC_2.1), libpcre.so.3 >= set:igW8KBZGd4, rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.oBwKDS Creating fastq-tools-debuginfo package Processing files: fastq-tools-debuginfo-0.8.3-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.b4Q2i6 find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.BVAEUI find-requires: running scripts (debuginfo) Requires: fastq-tools = 0.8.3-alt1, /usr/lib/debug/lib/ld-linux.so.2.debug, debug(libc.so.6), debug(libm.so.6), debug(libpcre.so.3) Adding to fastq-tools-debuginfo a strict dependency on fastq-tools Wrote: /usr/src/RPM/RPMS/i586/fastq-tools-0.8.3-alt1.i586.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/i586/fastq-tools-debuginfo-0.8.3-alt1.i586.rpm (w2.lzdio) 12.22user 3.97system 0:26.13elapsed 61%CPU (0avgtext+0avgdata 27288maxresident)k 0inputs+0outputs (0major+1200807minor)pagefaults 0swaps 5.33user 2.12system 0:42.14elapsed 17%CPU (0avgtext+0avgdata 127356maxresident)k 1536inputs+0outputs (0major+190874minor)pagefaults 0swaps