<86>Aug 6 05:08:46 userdel[78235]: delete user 'rooter' <86>Aug 6 05:08:46 userdel[78235]: removed group 'rooter' owned by 'rooter' <86>Aug 6 05:08:46 userdel[78235]: removed shadow group 'rooter' owned by 'rooter' <86>Aug 6 05:08:46 groupadd[78255]: group added to /etc/group: name=rooter, GID=933 <86>Aug 6 05:08:46 groupadd[78255]: group added to /etc/gshadow: name=rooter <86>Aug 6 05:08:46 groupadd[78255]: new group: name=rooter, GID=933 <86>Aug 6 05:08:46 useradd[78269]: new user: name=rooter, UID=933, GID=933, home=/root, shell=/bin/bash <86>Aug 6 05:08:46 userdel[78284]: delete user 'builder' <86>Aug 6 05:08:46 userdel[78284]: removed group 'builder' owned by 'builder' <86>Aug 6 05:08:46 userdel[78284]: removed shadow group 'builder' owned by 'builder' <86>Aug 6 05:08:46 groupadd[78295]: group added to /etc/group: name=builder, GID=934 <86>Aug 6 05:08:46 groupadd[78295]: group added to /etc/gshadow: name=builder <86>Aug 6 05:08:46 groupadd[78295]: new group: name=builder, GID=934 <86>Aug 6 05:08:46 useradd[78306]: new user: name=builder, UID=934, GID=934, home=/usr/src, shell=/bin/bash warning: user user does not exist - using root warning: group user does not exist - using root warning: user user does not exist - using root warning: group user does not exist - using root warning: user user does not exist - using root warning: group user does not exist - using root warning: user user does not exist - using root warning: group user does not exist - using root <13>Aug 6 05:08:48 rpmi: xorg-proto-devel-2022.1-alt1 sisyphus+299488.100.1.1 1651731532 installed <13>Aug 6 05:08:48 rpmi: libglvnd-7:1.4.0-alt1 sisyphus+292743.100.1.1 1640688166 installed <13>Aug 6 05:08:48 rpmi: libexpat-2.4.7-alt1 sisyphus+296417.100.1.1 1646812526 installed <13>Aug 6 05:08:48 rpmi: libpng16-1.6.37-alt1 sisyphus+275734.100.2.1 1624788812 installed <13>Aug 6 05:08:48 rpmi: libjpeg-2:2.1.2-alt1.2 sisyphus+300827.100.2.1 1653916654 installed <13>Aug 6 05:08:48 rpmi: libXau-1.0.9-alt1 sisyphus+278247.100.1.1 1626080738 installed <13>Aug 6 05:08:48 rpmi: libwayland-server-1.21.0-alt1.1 sisyphus+302874.200.2.1 1656661872 installed <13>Aug 6 05:08:48 rpmi: libicu71-1:7.1.1-alt1 sisyphus+289194.300.3.1 1650228483 installed <13>Aug 6 05:08:48 rpmi: libgraphite2-1.3.14-alt2.1 sisyphus+279571.100.1.2 1626605157 installed <13>Aug 6 05:08:48 rpmi: xml-utils-1:2.9.14-alt1 sisyphus+299383.100.1.1 1651519556 installed <13>Aug 6 05:08:48 rpmi: rpm-build-gir-0.7.3-alt3 sisyphus+242150.100.1.1 1575312005 installed <13>Aug 6 05:08:48 rpmi: libgraphite2-devel-1.3.14-alt2.1 sisyphus+279571.100.1.2 1626605157 installed <13>Aug 6 05:08:48 rpmi: icu-utils-1:7.1.1-alt1 sisyphus+289194.300.3.1 1650228483 installed <13>Aug 6 05:08:48 rpmi: libicu-devel-1:7.1.1-alt1 sisyphus+289194.300.3.1 1650228483 installed <13>Aug 6 05:08:48 rpmi: libXau-devel-1.0.9-alt1 sisyphus+278247.100.1.1 1626080738 installed <13>Aug 6 05:08:48 rpmi: libGLES-7:1.4.0-alt1 sisyphus+292743.100.1.1 1640688166 installed <13>Aug 6 05:08:48 rpmi: libOpenGL-7:1.4.0-alt1 sisyphus+292743.100.1.1 1640688166 installed <13>Aug 6 05:08:48 rpmi: zlib-devel-1.2.12-alt2 sisyphus+301913.100.1.1 1655062069 installed <13>Aug 6 05:08:48 rpmi: libncurses-6.3.20220618-alt1 sisyphus+302449.100.1.1 1655835262 installed <13>Aug 6 05:08:48 rpmi: libtinfo-devel-6.3.20220618-alt1 sisyphus+302449.100.1.1 1655835262 installed <13>Aug 6 05:08:49 rpmi: libncurses-devel-6.3.20220618-alt1 sisyphus+302449.100.1.1 1655835262 installed <13>Aug 6 05:08:49 rpmi: libxshmfence-1.3-alt1 sisyphus+278248.100.1.1 1626080763 installed <13>Aug 6 05:08:49 rpmi: libX11-locales-3:1.8-alt1 sisyphus+299436.100.1.1 1651655356 installed <13>Aug 6 05:08:49 rpmi: libXdmcp-1.1.3-alt1 sisyphus+278816.100.1.1 1626219233 installed <13>Aug 6 05:08:49 rpmi: libxcb-1.15-alt1 sisyphus+299436.300.1.1 1651655490 installed <13>Aug 6 05:08:49 rpmi: libX11-3:1.8-alt1 sisyphus+299436.100.1.1 1651655362 installed <13>Aug 6 05:08:49 rpmi: libXext-1.3.4-alt1 sisyphus+278817.100.1.3 1626262589 installed <13>Aug 6 05:08:49 rpmi: libXfixes-6.0.0-alt1 sisyphus+284644.300.1.1 1630910333 installed <13>Aug 6 05:08:49 rpmi: libXrender-0.9.10-alt1 sisyphus+278480.100.1.2 1626227741 installed <13>Aug 6 05:08:49 rpmi: libXcursor-1.2.1-alt1 sisyphus+297765.200.1.1 1649053934 installed <13>Aug 6 05:08:49 rpmi: libXinerama-1.1.4-alt1 sisyphus+275328.100.2.2 1624575558 installed <13>Aug 6 05:08:49 rpmi: libXxf86vm-1.1.4-alt2 sisyphus+275334.100.2.2 1624577012 installed <13>Aug 6 05:08:50 rpmi: libxcb-devel-1.15-alt1 sisyphus+299436.300.1.1 1651655490 installed <13>Aug 6 05:08:50 rpmi: libX11-devel-3:1.8-alt1 sisyphus+299436.100.1.1 1651655362 installed <13>Aug 6 05:08:50 rpmi: libXrender-devel-0.9.10-alt1 sisyphus+278480.100.1.2 1626227741 installed <13>Aug 6 05:08:50 rpmi: libwayland-client-1.21.0-alt1.1 sisyphus+302874.200.2.1 1656661872 installed <13>Aug 6 05:08:50 rpmi: libpciaccess-1:0.16-alt1 sisyphus+278288.100.1.1 1626084208 installed <13>Aug 6 05:08:50 rpmi: libdrm-1:2.4.112-alt1 sisyphus+303245.100.1.1 1657103580 installed <13>Aug 6 05:08:50 rpmi: libGLX-mesa-4:22.1.4-alt1 sisyphus+303837.100.1.1 1658043380 installed <13>Aug 6 05:08:50 rpmi: libGLX-7:1.4.0-alt1 sisyphus+292743.100.1.1 1640688166 installed <13>Aug 6 05:08:50 rpmi: libGL-7:1.4.0-alt1 sisyphus+292743.100.1.1 1640688166 installed <13>Aug 6 05:08:50 rpmi: libGLU-4:9.0.1-alt1 sisyphus+278350.100.1.2 1626174378 installed <13>Aug 6 05:08:50 rpmi: libgbm-4:22.1.4-alt1 sisyphus+303837.100.1.1 1658043380 installed <13>Aug 6 05:08:50 rpmi: libEGL-mesa-4:22.1.4-alt1 sisyphus+303837.100.1.1 1658043380 installed <13>Aug 6 05:08:50 rpmi: libEGL-7:1.4.0-alt1 sisyphus+292743.100.1.1 1640688166 installed <13>Aug 6 05:08:50 rpmi: libglvnd-devel-7:1.4.0-alt1 sisyphus+292743.100.1.1 1640688166 installed <13>Aug 6 05:08:50 rpmi: libGLU-devel-4:9.0.1-alt1 sisyphus+278350.100.1.2 1626174378 installed <13>Aug 6 05:08:50 rpmi: gcc-c++-common-1.4.27-alt1 sisyphus+278099.1300.1.1 1626028636 installed <13>Aug 6 05:08:50 rpmi: libstdc++12-devel-12.1.1-alt1 sisyphus+300988.100.1.1 1654028661 installed <13>Aug 6 05:08:51 rpmi: gcc12-c++-12.1.1-alt1 sisyphus+300988.100.1.1 1654028661 installed <13>Aug 6 05:08:51 rpmi: libbrotlicommon-1.0.9-alt2 sisyphus+278430.100.1.2 1626213212 installed <13>Aug 6 05:08:51 rpmi: libbrotlidec-1.0.9-alt2 sisyphus+278430.100.1.2 1626213212 installed <13>Aug 6 05:08:51 rpmi: libharfbuzz-4.4.1-alt1 sisyphus+302811.100.1.1 1656498739 installed <13>Aug 6 05:08:51 rpmi: libfreetype-2.12.1-alt1 sisyphus+299380.100.1.1 1651508335 installed <13>Aug 6 05:08:51 rpmi: fontconfig-2.13.1-alt4 sisyphus+304281.100.1.1 1658733593 installed Updating fonts cache: <29>Aug 6 05:08:52 fontconfig: Updating fonts cache: succeeded [ DONE ] <13>Aug 6 05:08:52 rpmi: libXft-2.3.4-alt1 sisyphus+284644.500.1.1 1630910448 installed <13>Aug 6 05:08:52 rpmi: libfltk13-1.3.8-alt1 sisyphus+301656.100.1.1 1654794789 installed <13>Aug 6 05:08:52 rpmi: libharfbuzz-icu-4.4.1-alt1 sisyphus+302811.100.1.1 1656498739 installed <13>Aug 6 05:08:52 rpmi: libharfbuzz-gobject-4.4.1-alt1 sisyphus+302811.100.1.1 1656498739 installed <13>Aug 6 05:08:52 rpmi: mpdecimal-2.5.1-alt1 sisyphus+291245.40.54.1 1643293464 installed <13>Aug 6 05:08:52 rpmi: libgdbm-1.8.3-alt10 sisyphus+278100.1600.1.1 1626059138 installed <13>Aug 6 05:08:52 rpmi: libp11-kit-0.24.1-alt1 sisyphus+293720.100.1.1 1642535281 installed <13>Aug 6 05:08:52 rpmi: libtasn1-4.18.0-alt2 sisyphus+301112.100.1.1 1654185769 installed <13>Aug 6 05:08:52 rpmi: rpm-macros-alternatives-0.5.2-alt1 sisyphus+300869.100.1.1 1653844113 installed <13>Aug 6 05:08:52 rpmi: alternatives-0.5.2-alt1 sisyphus+300869.100.1.1 1653844113 installed <13>Aug 6 05:08:52 rpmi: ca-certificates-2022.07.22-alt1 sisyphus+304126.100.1.2 1658509204 installed <13>Aug 6 05:08:52 rpmi: ca-trust-0.1.3-alt1 sisyphus+299449.100.1.1 1651660001 installed <13>Aug 6 05:08:52 rpmi: p11-kit-trust-0.24.1-alt1 sisyphus+293720.100.1.1 1642535281 installed <13>Aug 6 05:08:52 rpmi: libcrypto1.1-1.1.1q-alt1 sisyphus+303203.100.1.1 1657027052 installed <13>Aug 6 05:08:52 rpmi: libssl1.1-1.1.1q-alt1 sisyphus+303203.100.1.1 1657027052 installed <13>Aug 6 05:08:52 rpmi: python3-3.10.6-alt1 sisyphus+304753.100.1.1 1659607170 installed <13>Aug 6 05:08:53 rpmi: python3-base-3.10.6-alt1 sisyphus+304753.100.1.1 1659607170 installed <13>Aug 6 05:08:53 rpmi: glib2-devel-2.72.3-alt1 sisyphus+302864.100.1.1 1656608026 installed <13>Aug 6 05:08:53 rpmi: libfreetype-devel-2.12.1-alt1 sisyphus+299380.100.1.1 1651508335 installed <13>Aug 6 05:08:53 rpmi: libharfbuzz-devel-4.4.1-alt1 sisyphus+302811.100.1.1 1656498739 installed <13>Aug 6 05:08:53 rpmi: fontconfig-devel-2.13.1-alt4 sisyphus+304281.100.1.1 1658733593 installed <13>Aug 6 05:08:53 rpmi: libpython3-3.10.6-alt1 sisyphus+304753.100.1.1 1659607170 installed <13>Aug 6 05:08:53 rpmi: tests-for-installed-python3-pkgs-0.1.19-alt1 sisyphus+301407.500.9.1 1658259230 installed <13>Aug 6 05:08:53 rpmi: rpm-build-python3-0.1.19-alt1 sisyphus+301407.500.9.1 1658259230 installed <13>Aug 6 05:08:54 rpmi: python3-dev-3.10.6-alt1 sisyphus+304753.100.1.1 1659607170 installed <13>Aug 6 05:08:54 rpmi: libXft-devel-2.3.4-alt1 sisyphus+284644.500.1.1 1630910448 installed <13>Aug 6 05:08:54 rpmi: libfltk-devel-1.3.8-alt1 sisyphus+301656.100.1.1 1654794789 installed <13>Aug 6 05:08:54 rpmi: gcc-c++-12-alt1 sisyphus+300988.300.1.1 1654033914 installed <13>Aug 6 05:08:54 rpmi: libXcursor-devel-1.2.1-alt1 sisyphus+297765.200.1.1 1649053934 installed <13>Aug 6 05:08:54 rpmi: libXext-devel-1.3.4-alt1 sisyphus+278817.100.1.3 1626262589 installed <13>Aug 6 05:08:54 rpmi: libXfixes-devel-6.0.0-alt1 sisyphus+284644.300.1.1 1630910333 installed <13>Aug 6 05:08:54 rpmi: libXinerama-devel-1.1.4-alt1 sisyphus+275328.100.2.2 1624575558 installed <13>Aug 6 05:08:54 rpmi: libpng-devel-1.6.37-alt1 sisyphus+275734.100.2.1 1624788812 installed <13>Aug 6 05:08:54 rpmi: libjpeg-devel-2:2.1.2-alt1.2 sisyphus+300827.100.2.1 1653916654 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/seaview-5.0.5-alt1.nosrc.rpm (w1.gzdio) Installing seaview-5.0.5-alt1.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.90213 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf seaview + echo 'Source #0 (seaview-5.0.5.tar.gz):' Source #0 (seaview-5.0.5.tar.gz): + /bin/gzip -dc /usr/src/RPM/SOURCES/seaview-5.0.5.tar.gz + /bin/tar -xf - + cd seaview + /bin/chmod -c -Rf u+rwX,go-w . + chmod -x addbootstrap.cxx align.cxx comlines.cxx concatenate.cxx custom.cxx least_squares_brl.cxx load_seq.cxx nexus.cxx pdf_or_ps.cxx pseudoterminal.cxx racnuc_fetch.cxx regions.cxx resource.cxx seaview.cxx statistics.cxx svg.cxx tbe.cxx threads.cxx treedraw.cxx treerecs_draw.cxx trees.cxx unrooted.cxx use_mase_files.cxx viewasprots.cxx win32_extras.cxx xfmatpt.cxx + chmod -x csrc/bionj.c csrc/dnapars.c csrc/lwl.c csrc/md5.c csrc/misc_acnuc.c csrc/parser.c csrc/parser.h csrc/phylip.c csrc/phylip.h csrc/phyml_util.c csrc/phyml_util.h csrc/protpars.c csrc/raa_acnuc.c csrc/raa_acnuc.h csrc/seq.c csrc/seq.h csrc/zsockr.c + sed -i 's|^\(CFLAGS.*\)|\1 -g -DFL_LIBRARY|' Makefile + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.52464 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + make -j16 make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF resource.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF concatenate.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF comlines.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF viewasprots.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF racnuc_fetch.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF pseudoterminal.cxx pseudoterminal.cxx: In function 'int run_external_prog_in_pseudoterm(char*, const char*, const char*)': pseudoterminal.cxx:342:24: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 342 | freopen( (dialogfname ? dialogfname : slavename), "r", stdin); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pseudoterminal.cxx:343:24: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 343 | freopen(slavename, "a", stderr); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF load_seq.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF threads.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF statistics.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF custom.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF pdf_or_ps.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF least_squares_brl.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/parser.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF regions.cxx regions.cxx: In function 'int create_gblocks_mask(SEA_VIEW*, region*, int, int, int, int, int)': regions.cxx:313:9: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 313 | system(cmd); | ~~~~~~^~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF tbe.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF svg.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/zsockr.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF xfmatpt.cxx In function 'int really_close(FD_matpt*)', inlined from 'void exit_button_proc(Fl_Widget*, FD_matpt*)' at xfmatpt.cxx:898:18: xfmatpt.cxx:889:5: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq1' with nonzero offset 1 [-Wfree-nonheap-object] 889 | free(matpt->seq1 + 1); | ~~~~^~~~~~~~~~~~~~~~~ xfmatpt.cxx:890:5: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq2' with nonzero offset 1 [-Wfree-nonheap-object] 890 | free(matpt->seq2 + 1); | ~~~~^~~~~~~~~~~~~~~~~ xfmatpt.cxx: In function 'void show_dot_plot(char*, char*, char*, char*, int, int, int, void*)': xfmatpt.cxx:124:21: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq1' with nonzero offset 1 [-Wfree-nonheap-object] 124 | free(matpt->seq1+1); | ~~~~^~~~~~~~~~~~~~~ xfmatpt.cxx:125:21: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq2' with nonzero offset 1 [-Wfree-nonheap-object] 125 | free(matpt->seq2+1); | ~~~~^~~~~~~~~~~~~~~ xfmatpt.cxx: In function 'int really_close(FD_matpt*)': xfmatpt.cxx:889:5: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq1' with nonzero offset 1 [-Wfree-nonheap-object] 889 | free(matpt->seq1 + 1); | ~~~~^~~~~~~~~~~~~~~~~ xfmatpt.cxx:890:5: warning: 'void free(void*)' called on pointer '*matpt.FD_matpt::seq2' with nonzero offset 1 [-Wfree-nonheap-object] 890 | free(matpt->seq2 + 1); | ~~~~^~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/md5.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF nexus.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF addbootstrap.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF align.cxx align.cxx: In function 'void replace_stars(char*)': align.cxx:1302:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1302 | fread(all, 1, l, in); | ~~~~~^~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/misc_acnuc.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/bionj.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF unrooted.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/phyml_util.c csrc/phyml_util.c: In function 'Warn_And_Exit': csrc/phyml_util.c:47:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 47 | fscanf(stdin,"%c",&c); | ^~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/dnapars.c csrc/dnapars.c: In function 'dnapars': csrc/dnapars.c:1685:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1685 | fread(tree, L, 1, outtree); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/lwl.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/protpars.c csrc/protpars.c: In function 'protpars': csrc/protpars.c:2097:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 2097 | fread(tree, L, 1, outtree); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF use_mase_files.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF treerecs_draw.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/raa_acnuc.c In function 'fill_gfrag_buf', inlined from 'raa_gfrag' at csrc/raa_acnuc.c:599:8: csrc/raa_acnuc.c:581:39: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 581 | raa_current_db->gfrag_data.buffer[lu] = 0; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ In file included from csrc/raa_acnuc.c:1: csrc/raa_acnuc.h: In function 'raa_gfrag': csrc/raa_acnuc.h:34:14: note: at offset 10001 into destination object 'buffer' of size 10001 34 | char buffer[RAA_GFRAG_BSIZE + 1]; | ^~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF trees.cxx trees.cxx: In function 'void run_phyml_callback(Fl_Widget*, void*)': trees.cxx:1301:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1301 | fread(bootstrap_trees, l, 1, in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ trees.cxx: In function 'void command_line_phylogeny(int, char**)': trees.cxx:2794:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 2794 | fread(utree, s, 1, in); | ~~~~~^~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/phylip.c In file included from /usr/include/stdio.h:894, from csrc/phylip.c:32: In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'readlong' at csrc/phylip.c:467:5: /usr/include/bits/stdio2.h:268:12: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 268 | return __fgets_chk_warn (__s, sz, __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'initcategs' at csrc/phylip.c:603:5: /usr/include/bits/stdio2.h:268:12: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 268 | return __fgets_chk_warn (__s, sz, __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'initprobcat' at csrc/phylip.c:634:5: /usr/include/bits/stdio2.h:268:12: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 268 | return __fgets_chk_warn (__s, sz, __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'initfreqs' at csrc/phylip.c:1021:5: /usr/include/bits/stdio2.h:268:12: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 268 | return __fgets_chk_warn (__s, sz, __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:11, inlined from 'readlong' at csrc/phylip.c:467:5, inlined from 'initnumlines' at csrc/phylip.c:1126:20: /usr/include/bits/stdio2.h:268:12: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 268 | return __fgets_chk_warn (__s, sz, __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF treedraw.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF seaview.cxx seaview.cxx: In function 'void delete_tmp_filename(const char*)': seaview.cxx:636:9: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 636 | system(fname); | ~~~~~~^~~~~~~ seaview.cxx: In function 'char* run_and_close_native_file_chooser(Fl_Native_File_Chooser*, int)': seaview.cxx:2899:45: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 2899 | if( *last_visited_directory )chdir(last_visited_directory); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF FL/Fl_SVG_Image.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/seq.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -o seaview seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o tbe.o treerecs_draw.o Fl_SVG_Image.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o `fltk-config --use-images --ldflags` -ldl -lpthread -lz -Wl,-z,muldefs make: Leaving directory '/usr/src/RPM/BUILD/seaview' + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.42566 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/seaview-buildroot + : + /bin/rm -rf -- /usr/src/tmp/seaview-buildroot + PATH=/usr/libexec/rpm-build:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games + cd seaview + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/seaview + mkdir -p /usr/src/tmp/seaview-buildroot/usr/bin + mkdir -p /usr/src/tmp/seaview-buildroot//usr/share/man/man1 + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/applications/ + install -m 755 seaview /usr/src/tmp/seaview-buildroot//usr/bin + install -m 644 seaview.html /usr/src/tmp/seaview-buildroot/usr/share/seaview/ + install -m 644 /usr/src/RPM/SOURCES/seaview.desktop /usr/src/tmp/seaview-buildroot/usr/share/applications/ + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/ + install -m 0644 -p seaview.xpm /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/seaview.xpm + install -m 644 seaview.1 /usr/src/tmp/seaview-buildroot//usr/share/man/man1 + /usr/lib/rpm/brp-alt egrep: warning: egrep is obsolescent; using grep -E Cleaning files in /usr/src/tmp/seaview-buildroot (auto) Verifying and fixing files in /usr/src/tmp/seaview-buildroot (binconfig,pkgconfig,libtool,desktop,gnuconfig) /usr/share/applications/seaview.desktop: performed minor cleanup: 6c6 < Icon=seaview.xpm --- > Icon=seaview Checking contents of files in /usr/src/tmp/seaview-buildroot/ (default) Compressing files in /usr/src/tmp/seaview-buildroot (auto) 056-debuginfo.brp: WARNING: debuginfo without debug sources. Verifying ELF objects in /usr/src/tmp/seaview-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) verify-elf: WARNING: ./usr/bin/seaview: uses non-LFS functions: fgetpos fopen freopen fsetpos mkstemp open Hardlinking identical .pyc and .opt-?.pyc files Executing(%check): /bin/sh -e /usr/src/tmp/rpm-tmp.42566 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + exit 0 Processing files: seaview-5.0.5-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.42566 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + DOCDIR=/usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + export DOCDIR + rm -rf /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + /bin/mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + cp -prL seaview.1.xml example.nxs /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + chmod -R go-w /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + chmod -R a+rX /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0.5 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.hj1WA9 find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.FOvkto find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) Requires: /lib/ld-linux.so.2, libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.11), libc.so.6(GLIBC_2.15), libc.so.6(GLIBC_2.2), libc.so.6(GLIBC_2.2.1), libc.so.6(GLIBC_2.3), libc.so.6(GLIBC_2.3.4), libc.so.6(GLIBC_2.34), libc.so.6(GLIBC_2.4), libc.so.6(GLIBC_2.7), libfltk.so.2 >= set: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, libfltk_images.so.2 >= set:jfWg1JaebIlCT0Tk9Z0EM7, libgcc_s.so.1(GCC_3.0), libm.so.6(GLIBC_2.0), libm.so.6(GLIBC_2.1), libm.so.6(GLIBC_2.29), libstdc++.so.6(CXXABI_1.3), libstdc++.so.6(CXXABI_1.3.8), libstdc++.so.6(CXXABI_1.3.9), libstdc++.so.6(GLIBCXX_3.4), libstdc++.so.6(GLIBCXX_3.4.20), libstdc++.so.6(GLIBCXX_3.4.21), libz.so.1 >= set:khM4g6JBZuPIo4PSZj1, rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.qrVEU8 Creating seaview-debuginfo package Processing files: seaview-debuginfo-5.0.5-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.yXAY0j find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.TgIi8T find-requires: running scripts (debuginfo) Requires: seaview = 5.0.5-alt1, /usr/lib/debug/lib/ld-linux.so.2.debug, debug(libc.so.6), debug(libfltk.so.2), debug(libfltk_images.so.2), debug(libgcc_s.so.1), debug(libm.so.6), debug(libstdc++.so.6), debug(libz.so.1) Adding to seaview-debuginfo a strict dependency on seaview Wrote: /usr/src/RPM/RPMS/i586/seaview-5.0.5-alt1.i586.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/i586/seaview-debuginfo-5.0.5-alt1.i586.rpm (w2.lzdio) 31.12user 3.52system 0:09.55elapsed 362%CPU (0avgtext+0avgdata 75176maxresident)k 0inputs+0outputs (0major+539656minor)pagefaults 0swaps 38.86user 8.33system 0:23.08elapsed 204%CPU (0avgtext+0avgdata 104176maxresident)k 0inputs+0outputs (30705major+888645minor)pagefaults 0swaps --- seaview-5.0.5-alt1.i586.rpm.repo 2021-12-13 03:56:05.000000000 +0000 +++ seaview-5.0.5-alt1.i586.rpm.hasher 2022-08-06 05:09:08.080811776 +0000 @@ -39,3 +39,3 @@ Provides: seaview = 5.0.5-alt1:sisyphus+291878.100.1.1 -File: /usr/bin/seaview 100755 root:root 27fe9ba582fe0f54b7ca0475bb6c43b0 +File: /usr/bin/seaview 100755 root:root a82c10b7b15c8c6f09d7329593ee96b5 File: /usr/share/applications/seaview.desktop 100644 root:root 8245612f5c1c5c0af83c390b3f0b74e2 @@ -48,2 +48,2 @@ File: /usr/share/seaview/seaview.html 100644 root:root 80a242b5972590cac2d1ebf90957b92b -RPMIdentity: 3333f9b0b3d9ffbae73a997d6d32d79af0b06faa379ddd14d57e3065812b31fd1b37d8c6c0790a6a1acf5d7ddbca8b4a65880f217091b6500b1a695a750d8920 +RPMIdentity: a77a848944878de645035d791eaaf9317dc41db58969d4187d903f2c09bd56c533c17d98ab981063776f2629af1422fd1c0f20b0710b9332cfb8c529e2539d4d --- seaview-debuginfo-5.0.5-alt1.i586.rpm.repo 2021-12-13 03:56:05.000000000 +0000 +++ seaview-debuginfo-5.0.5-alt1.i586.rpm.hasher 2022-08-06 05:09:08.254814909 +0000 @@ -1,4 +1,4 @@ -/usr/lib/debug/.build-id/73 40755 root:root -/usr/lib/debug/.build-id/73/a7c148e88bc227b0af807dc5490a3749b2b053 120777 root:root ../../../../bin/seaview -/usr/lib/debug/.build-id/73/a7c148e88bc227b0af807dc5490a3749b2b053.debug 120777 root:root ../../usr/bin/seaview.debug +/usr/lib/debug/.build-id/b6 40755 root:root +/usr/lib/debug/.build-id/b6/b9a5684eb2931c6d2cbc2fa294c2700ed00b5c 120777 root:root ../../../../bin/seaview +/usr/lib/debug/.build-id/b6/b9a5684eb2931c6d2cbc2fa294c2700ed00b5c.debug 120777 root:root ../../usr/bin/seaview.debug /usr/lib/debug/usr/bin/seaview.debug 100644 root:root @@ -15,6 +15,6 @@ Provides: seaview-debuginfo = 5.0.5-alt1:sisyphus+291878.100.1.1 -File: /usr/lib/debug/.build-id/73 40755 root:root -File: /usr/lib/debug/.build-id/73/a7c148e88bc227b0af807dc5490a3749b2b053 120777 root:root ../../../../bin/seaview -File: /usr/lib/debug/.build-id/73/a7c148e88bc227b0af807dc5490a3749b2b053.debug 120777 root:root ../../usr/bin/seaview.debug -File: /usr/lib/debug/usr/bin/seaview.debug 100644 root:root 3c40b949ba9425df61736d9978487d3c -RPMIdentity: b0d975db4d95f8dd5ba4909363e1f3d31486eb16ec625814f53677c4dae0be2d04ecba0aed14e3cc6bc1ec23fedb2bf3d3ac411c11010c79395ba2afabeeaefa +File: /usr/lib/debug/.build-id/b6 40755 root:root +File: /usr/lib/debug/.build-id/b6/b9a5684eb2931c6d2cbc2fa294c2700ed00b5c 120777 root:root ../../../../bin/seaview +File: /usr/lib/debug/.build-id/b6/b9a5684eb2931c6d2cbc2fa294c2700ed00b5c.debug 120777 root:root ../../usr/bin/seaview.debug +File: /usr/lib/debug/usr/bin/seaview.debug 100644 root:root 454fcd48c5197309644fbf0403afbc01 +RPMIdentity: 66607004db696a82fdcde57899d9ca42321ee21aa01780c0dc01f3bb4e360f4ddfd5baf116cc66a70113a557fe9047f1e0446024227ef36bc060101a14c5f0ad