<86>May 29 12:03:28 userdel[87023]: delete user 'rooter' <86>May 29 12:03:28 userdel[87023]: removed group 'rooter' owned by 'rooter' <86>May 29 12:03:28 groupadd[87037]: group added to /etc/group: name=rooter, GID=663 <86>May 29 12:03:28 groupadd[87037]: group added to /etc/gshadow: name=rooter <86>May 29 12:03:28 groupadd[87037]: new group: name=rooter, GID=663 <86>May 29 12:03:28 useradd[87051]: new user: name=rooter, UID=663, GID=663, home=/root, shell=/bin/bash <86>May 29 12:03:28 userdel[87077]: delete user 'builder' <86>May 29 12:03:28 userdel[87077]: removed group 'builder' owned by 'builder' <86>May 29 12:03:28 userdel[87077]: removed shadow group 'builder' owned by 'builder' <86>May 29 12:03:28 groupadd[87146]: group added to /etc/group: name=builder, GID=664 <86>May 29 12:03:28 groupadd[87146]: group added to /etc/gshadow: name=builder <86>May 29 12:03:28 groupadd[87146]: new group: name=builder, GID=664 <86>May 29 12:03:28 useradd[87152]: new user: name=builder, UID=664, 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sisyphus+245000.24500.79.1 1583243182 installed <13>May 29 12:03:38 rpmi: python3-module-linecache2-1.0.0-alt1.git20150306.2.1 sisyphus+228360.2100.5.2 1556666704 installed <13>May 29 12:03:38 rpmi: python3-module-traceback2-1.4.0-alt2.1 sisyphus+227534.300.1.3 1555957009 installed <13>May 29 12:03:38 rpmi: python3-module-kiwisolver-1.2.0-alt1 sisyphus+248652.200.3.1 1585313818 installed <13>May 29 12:03:38 rpmi: python3-module-joblib-0.14.1-alt1 sisyphus+248979.40.2.1 1585654289 installed <13>May 29 12:03:38 rpmi: python3-module-iniconfig-1.0.0-alt2 sisyphus+235493.2400.6.1 1565442448 installed <13>May 29 12:03:38 rpmi: python3-module-funcsigs-1.0.2-alt2 sisyphus+228355.2600.2.1 1556560236 installed <13>May 29 12:03:38 rpmi: pytz-zoneinfo-1:2019.3-alt1 sisyphus+242012.100.2.1 1575623104 installed <13>May 29 12:03:38 rpmi: python3-module-dateutil-2.8.1-alt1 sisyphus+248266.102.7.1 1584846156 installed <13>May 29 12:03:38 rpmi: python3-module-certifi-2019.11.28-alt1 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installed <13>May 29 12:03:39 rpmi: python3-module-markupsafe-1.1.1-alt1 sisyphus+248369.100.1.1 1585046136 installed <13>May 29 12:03:39 rpmi: python3-module-jinja2-2.10.3-alt1 sisyphus+241982.100.1.1 1575023523 installed <13>May 29 12:03:39 rpmi: python3-module-imagesize-1.1.0-alt1 sisyphus+229015.100.2.1 1557233756 installed <13>May 29 12:03:39 rpmi: python3-module-pytz-1:2019.3-alt1 sisyphus+242012.100.2.1 1575623104 installed <13>May 29 12:03:39 rpmi: python3-module-babel-1:2.6.0-alt1 sisyphus+228351.2400.6.2 1556652168 installed <13>May 29 12:03:39 rpmi: python3-module-ndg-0.4.2-alt1.qa1 sisyphus+227504.1300.1.2 1555853234 installed <13>May 29 12:03:40 rpmi: python3-module-chardet-3.0.4-alt1 sisyphus+227476.1700.1.2 1555756717 installed <13>May 29 12:03:40 rpmi: python3-module-webencodings-0.5.1-alt2 sisyphus+245915.200.1.1 1581496105 installed <13>May 29 12:03:40 rpmi: python3-module-pycparser-2.19-alt2 sisyphus+245734.100.1.1 1581192421 installed <13>May 29 12:03:40 rpmi: python3-module-cffi-1.14.0-alt1 sisyphus+244999.200.3.1 1585219427 installed <13>May 29 12:03:40 rpmi: python3-module-cryptography-2.9-alt1 sisyphus+249274.100.1.1 1585916902 installed <13>May 29 12:03:40 rpmi: python3-module-OpenSSL-19.0.0-alt1 sisyphus+238757.100.1.1 1570339901 installed <13>May 29 12:03:40 rpmi: python3-module-ndg-httpsclient-0.4.2-alt1.qa1 sisyphus+227504.1300.1.2 1555853234 installed <13>May 29 12:03:40 rpmi: python3-module-urllib3-2:1.25.6-alt1 sisyphus+238720.100.2.1 1570349439 installed <13>May 29 12:03:40 rpmi: python3-module-requests-2.23.0-alt1 sisyphus+248062.500.2.1 1584568230 installed <13>May 29 12:03:40 rpmi: python-sphinx-objects.inv-1:2.3.9.20200420-alt1 sisyphus+250502.100.1.1 1587598981 installed <13>May 29 12:03:40 rpmi: libnumpy-py3-1:1.15.4-alt5 sisyphus+247694.100.3.3 1584382488 installed <13>May 29 12:03:40 rpmi: libnumpy-1:1.15.4-alt5 sisyphus+247694.100.3.3 1584382488 installed <13>May 29 12:03:40 rpmi: libtinfo-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686226 installed <13>May 29 12:03:40 rpmi: libncurses-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686226 installed <13>May 29 12:03:40 rpmi: python3-dev-3.8.2-alt1 sisyphus+244999.100.3.1 1585218480 installed <13>May 29 12:03:40 rpmi: python3-module-setuptools-1:46.1.3-alt1 sisyphus+250566.200.3.1 1587973342 installed <13>May 29 12:03:40 rpmi: python3-module-twisted-runner-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:40 rpmi: python3-module-twisted-logger-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:40 rpmi: python3-module-twisted-web-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:40 rpmi: python3-module-twisted-conch-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:40 rpmi: python3-module-twisted-names-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:40 rpmi: python3-module-twisted-pair-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:40 rpmi: python3-module-twisted-positioning-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:41 rpmi: python3-module-twisted-core-test-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:41 rpmi: python3-module-twisted-words-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:41 rpmi: python3-module-automat-20.2.0-alt1 sisyphus+248641.100.1.1 1585254697 installed <13>May 29 12:03:41 rpmi: python3-module-twisted-core-18.9.0-alt1 sisyphus+245000.25400.79.1 1583246892 installed <13>May 29 12:03:41 rpmi: python3-module-tornado-5.1.1-alt2 sisyphus+245000.7600.78.1 1583199244 installed <13>May 29 12:03:42 rpmi: libxblas-1.0.248-alt1.3 sisyphus+229150.100.1.1 1557388786 installed <13>May 29 12:03:42 rpmi: libxkbcommon-0.10.0-alt1 sisyphus+244530.100.1.1 1579516274 installed <13>May 29 12:03:42 rpmi: publicsuffix-list-dafsa-20200401-alt1 sisyphus+249161.100.1.1 1585815856 installed <13>May 29 12:03:42 rpmi: libpsl-0.21.0-alt2 sisyphus+237083.100.1.1 1567531657 installed <13>May 29 12:03:42 rpmi: libverto-0.3.0-alt1_7 sisyphus+225932.100.1.1 1553994919 installed <13>May 29 12:03:42 rpmi: libkeyutils-1.6-alt2 sisyphus+226520.100.2.1 1554512089 installed <13>May 29 12:03:42 rpmi: libgudev-1:233-alt1 sisyphus+235422.100.1.1 1564855273 installed <13>May 29 12:03:42 rpmi: udev-rules-1:245.5-alt1 sisyphus+250810.500.6.1 1588357095 installed <13>May 29 12:03:42 rpmi: libquadmath0-9.3.1-alt1 sisyphus+251917.40.3.1 1589812684 installed <13>May 29 12:03:42 rpmi: libgfortran5-9.3.1-alt1 sisyphus+251917.40.3.1 1589812684 installed <13>May 29 12:03:42 rpmi: liblapack-1:3.8.0-alt3 sisyphus+221521.100.1.1 1550134903 installed <13>May 29 12:03:42 rpmi: python3-module-numpy-1:1.15.4-alt5 sisyphus+247694.100.3.3 1584382488 installed <13>May 29 12:03:42 rpmi: python3-module-numpy-testing-1:1.15.4-alt5 sisyphus+247694.100.3.3 1584382488 installed <13>May 29 12:03:42 rpmi: libepoxy-1.5.4-alt1 sisyphus+242061.100.1.1 1575190160 installed <13>May 29 12:03:42 rpmi: libdatrie-0.2.9-alt1_6 1511686676 installed <13>May 29 12:03:42 rpmi: libthai-0.1.28-alt1_1 sisyphus+226107.100.1.1 1554123079 installed <13>May 29 12:03:42 rpmi: libcom_err-1.44.6-alt1 sisyphus+224154.100.1.1 1552091678 installed <86>May 29 12:03:42 groupadd[115816]: group added to /etc/group: name=_keytab, GID=499 <86>May 29 12:03:42 groupadd[115816]: group added to /etc/gshadow: name=_keytab <86>May 29 12:03:42 groupadd[115816]: new group: name=_keytab, GID=499 <13>May 29 12:03:42 rpmi: libkrb5-1.17.1-alt1 sisyphus+242784.100.1.1 1576137330 installed <13>May 29 12:03:42 rpmi: libtirpc-1.2.6-alt1 sisyphus+250076.100.1.1 1587038270 installed <13>May 29 12:03:42 rpmi: libnsl2-1.1.0-alt1_1 1511548749 installed <13>May 29 12:03:42 rpmi: python-modules-encodings-2.7.18-alt1 sisyphus+250345.100.4.1 1588665080 installed <13>May 29 12:03:42 rpmi: 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sisyphus+227535.1100.2.1 1556009290 installed <13>May 29 12:03:51 rpmi: python3-module-tabulate-0.7.3-alt2 sisyphus+227531.1600.1.2 1555925404 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/python3-module-ccsnmultivar-0.0.5-alt2.nosrc.rpm Installing python3-module-ccsnmultivar-0.0.5-alt2.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.99878 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf python3-module-ccsnmultivar-0.0.5 + echo 'Source #0 (python3-module-ccsnmultivar-0.0.5.tar):' Source #0 (python3-module-ccsnmultivar-0.0.5.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/python3-module-ccsnmultivar-0.0.5.tar + cd python3-module-ccsnmultivar-0.0.5 + /bin/chmod -c -Rf u+rwX,go-w . + find ./ -type f -name '*.py' -exec 2to3 -w -n '{}' + RefactoringTool: Skipping optional fixer: buffer RefactoringTool: Skipping optional fixer: idioms RefactoringTool: Skipping optional fixer: set_literal RefactoringTool: Skipping optional fixer: ws_comma RefactoringTool: No changes to ./setup.py RefactoringTool: Refactored ./docs/conf.py RefactoringTool: Refactored ./ccsnmultivar/multivar.py --- ./docs/conf.py (original) +++ ./docs/conf.py (refactored) @@ -63,8 +63,8 @@ master_doc = 'README.md' # General information about the project. -project = u'ccsnmultivar' -copyright = u'2014, Bill Engels' +project = 'ccsnmultivar' +copyright = '2014, Bill Engels' # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the @@ -216,8 +216,8 @@ # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ - ('index', 'ccsnmultivar.tex', u'ccsnmultivar Documentation', - u'Bill Engels', 'manual'), + ('index', 'ccsnmultivar.tex', 'ccsnmultivar Documentation', + 'Bill Engels', 'manual'), ] # The name of an image file (relative to this directory) to place at the top of @@ -246,8 +246,8 @@ # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ - ('index', 'ccsnmultivar', u'ccsnmultivar Documentation', - [u'Bill Engels'], 1) + ('index', 'ccsnmultivar', 'ccsnmultivar Documentation', + ['Bill Engels'], 1) ] # If true, show URL addresses after external links. @@ -260,8 +260,8 @@ # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ - ('index', 'ccsnmultivar', u'ccsnmultivar Documentation', - u'Bill Engels', 'ccsnmultivar', 'One line description of project.', + ('index', 'ccsnmultivar', 'ccsnmultivar Documentation', + 'Bill Engels', 'ccsnmultivar', 'One line description of project.', 'Miscellaneous'), ] --- ./ccsnmultivar/multivar.py (original) +++ ./ccsnmultivar/multivar.py (refactored) @@ -4,7 +4,7 @@ import re as re import csv as csv from tabulate import tabulate -import GWUtils +from . import GWUtils class Multivar(object): @@ -55,12 +55,12 @@ row_names = self._designmatrix_object.get_rownames() # make sure waveforms are matched # loop through Xrow_names, use as key for Y_dict, populate Y_matrix - Y = np.empty((len(row_names),len(Y_dict[Y_dict.keys()[0]]))) + Y = np.empty((len(row_names),len(Y_dict[list(Y_dict.keys())[0]]))) # check if waveforms are complex valued. if so, instantiate Y as complex type - if sum(np.iscomplex(Y_dict[Y_dict.keys()[0]])): + if sum(np.iscomplex(Y_dict[list(Y_dict.keys())[0]])): # then it is complex - Y = np.empty((len(row_names),len(Y_dict[Y_dict.keys()[0]]))).astype(np.complex) + Y = np.empty((len(row_names),len(Y_dict[list(Y_dict.keys())[0]]))).astype(np.complex) for i in np.arange(0,len(row_names)): Y[i,:] = Y_dict[row_names[i]] @@ -206,18 +206,18 @@ raise ValueError("degrees of freedom <= 0, Hotellings T2 not defined") # print catalog and basis info - cat_table = self._catalog_object.get_params().items() - bas_table = self._basis_object.get_params().items() - print tabulate(cat_table+bas_table,tablefmt='plain') + cat_table = list(self._catalog_object.get_params().items()) + bas_table = list(self._basis_object.get_params().items()) + print(tabulate(cat_table+bas_table,tablefmt='plain')) # then print pvalues # make T^2 & pvalue table headers = self._results[0] table = self._results[1:] - print tabulate(table, headers, tablefmt="rst") - print "Formula Used: %s" % self._designmatrix_object._formula - print "Degrees of Freedom (n - p - k): %s" % str(total_dof) - print "Condition Number of X^T*X: %.2f" % np.linalg.cond(np.dot(self._X.T, self._X)) + print(tabulate(table, headers, tablefmt="rst")) + print("Formula Used: %s" % self._designmatrix_object._formula) + print("Degrees of Freedom (n - p - k): %s" % str(total_dof)) + print("Condition Number of X^T*X: %.2f" % np.linalg.cond(np.dot(self._X.T, selfRefactoringTool: Refactored ./ccsnmultivar/designmatrix.py RefactoringTool: Refactored ./ccsnmultivar/catalog.py ._X))) def reconstruct(self): """ return reconstructed waveforms fit by the multivar object""" @@ -240,7 +240,7 @@ ["Max: ",np.max(olaps)]] header = ["Percentile","Overlap"] - print tabulate(table,header,tablefmt="rst") + print(tabulate(table,header,tablefmt="rst")) def compute_overlaps(self, *args): """ compute overlaps """ --- ./ccsnmultivar/designmatrix.py (original) +++ ./ccsnmultivar/designmatrix.py (refactored) @@ -15,7 +15,7 @@ def get_metadata(self): # return column names, row names, formula - print "not done yet" + print("not done yet") def get_rownames(self): return self._row_names @@ -133,7 +133,7 @@ # store dictionary of encoder functions to keep for prediction encoder_dict[key] = polynomial_encoder else: - print encoding + print(encoding) raise Exception("Encoding name error") # now compute interaction designmatrices for interaction in inter_list: @@ -224,7 +224,7 @@ # now do interactions inter_list = self._inter_list for interaction in inter_list: - if 'twoway' in encoder_dict.keys(): + if 'twoway' in list(encoder_dict.keys()): encoder = encoder_dict['twoway'] param_name1 = interaction[0] param_name2 = interaction[1] @@ -237,7 +237,7 @@ for i in np.arange(0,len(names)): Xbycol_dict[names[i]] = X_int[:,i] - if 'threeway' in encoder_dict.keys(): + if 'threeway' in list(encoder_dict.keys()): encoder = encoder_dict['threeway'] param_name1 = interaction[0] param_name2 = interaction[1] @@ -254,7 +254,7 @@ # remove columns that were trimmed (if any) trimmed_columns = encoder_dict['trimmed_columns'] - full_columns = Xbycol_dict.keys() + full_columns = list(Xbycol_dict.keys()) used_columns = [x for x in full_columns if x not in trimmed_columns] # make design matrix array X = [] @@ -442,7 +442,7 @@ def _poly_encode(param_dict,degree,param_name): - x = np.array(map(float,param_dict[param_name])) + x = np.array(list(map(float,param_dict[param_name]))) degree = int(degree) if len(np.unique(x)) < 5: warning.warn("Not many unique values of parameter %s for Poly encoding" & param_name) @@ -454,7 +454,7 @@ def polynomial_encoder(param_name, new_values): # generate chebyshev polynomials x = new_values - x = np.array(map(float, x)) + x = np.array(list(map(float, x))) # check if new_values are outside the range of the originals if (max(x) > max_x) or (min(x) < min_x): raise ValueError("Cannot extrapolate outside original parameter range") @@ -480,4 +480,4 @@ return polynomial_encoder, X, col_names def _bs_encode(param_dict,bsplineparameters, param_name): - print "not implemented yet" + print("not implemented yet") --- ./ccsnmultivar/catalog.py (original) +++ ./ccsnmultivar/catalog.py (refactored) @@ -75,7 +75,7 @@ freq_bin_lower = 40 fs = self._metadata['fs'] Y_transformed = {} - for key in self.Y_dict.keys(): + for key in list(self.Y_dict.keys()): # normalize by fs, bins have units strain/Hz fs = self._metadata["fs"] Y_transformed[key] = (1./fs)*np.fft.fft(self.Y_dict[key])[freq_bin_lower:freq_bin_upper] @@ -89,13 +89,13 @@ self.sigma = convert_psd_to_sigma(self.psd, dF) def _spectogram(self): - print "not implemented yet" + print("not implemented yet") def _amplitude(self): - print "not implemented yet" + print("not implemented yet") def _phase(self): - print "not implemented yet" + print("not implemented yet") def mcmc_hook(self): dF = RefactoringTool: No changes to ./ccsnmultivar/basis.py RefactoringTool: No changes to ./ccsnmultivar/__init__.py RefactoringTool: No changes to ./ccsnmultivar/GWUtils.py RefactoringTool: Files that were modified: RefactoringTool: ./setup.py RefactoringTool: ./docs/conf.py RefactoringTool: ./ccsnmultivar/multivar.py RefactoringTool: ./ccsnmultivar/designmatrix.py RefactoringTool: ./ccsnmultivar/catalog.py RefactoringTool: ./ccsnmultivar/basis.py RefactoringTool: ./ccsnmultivar/__init__.py RefactoringTool: ./ccsnmultivar/GWUtils.py self._metadata["dF"] @@ -141,7 +141,7 @@ """ # right now, Y_dict, using my ccsnmultivar github waveform sets - for key in Y_dict.keys(): + for key in list(Y_dict.keys()): Y_dict[key] = signal.decimate(Y_dict[key], 4, ftype='fir') metadata = {} metadata["fs"] = 4096. # in Hz @@ -168,7 +168,7 @@ wave_list = [x for x in wave_list if x != []] Y_dict = {} for i in np.arange(0,len(wave_list)): - Y_dict[wave_list[i][0]] = map(np.float, wave_list[i][1:]) + Y_dict[wave_list[i][0]] = list(map(np.float, wave_list[i][1:])) return Y_dict ++ find ./ -name '*.py' + sed -i 's|#!/usr/bin/python|#!/usr/bin/python3|' ./setup.py ./docs/conf.py ./ccsnmultivar/multivar.py ./ccsnmultivar/designmatrix.py ./ccsnmultivar/catalog.py ./ccsnmultivar/basis.py ./ccsnmultivar/__init__.py ./ccsnmultivar/GWUtils.py + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.58786 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python3-module-ccsnmultivar-0.0.5 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export FFLAGS + /usr/bin/python3 setup.py build --debug running build running build_py creating build creating build/lib creating build/lib/ccsnmultivar copying ccsnmultivar/GWUtils.py -> build/lib/ccsnmultivar copying ccsnmultivar/__init__.py -> build/lib/ccsnmultivar copying ccsnmultivar/basis.py -> build/lib/ccsnmultivar copying ccsnmultivar/catalog.py -> build/lib/ccsnmultivar copying ccsnmultivar/designmatrix.py -> build/lib/ccsnmultivar copying ccsnmultivar/multivar.py -> build/lib/ccsnmultivar /usr/lib/python3/site-packages/sklearn/utils/__init__.py:4: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.9 it will stop working from collections import Sequence /usr/lib/python3/site-packages/sklearn/model_selection/_split.py:18: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.9 it will stop working from collections import Iterable /usr/lib/python3/site-packages/sklearn/model_selection/_search.py:16: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.9 it will stop working from collections import Mapping, namedtuple, defaultdict, Sequence + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.99299 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/python3-module-ccsnmultivar-buildroot + : + /bin/rm -rf -- /usr/src/tmp/python3-module-ccsnmultivar-buildroot + cd python3-module-ccsnmultivar-0.0.5 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export FFLAGS + /usr/bin/python3 setup.py install --skip-build --root=/usr/src/tmp/python3-module-ccsnmultivar-buildroot --force running install running install_lib creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3 creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/multivar.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/designmatrix.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/catalog.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/basis.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/__init__.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/GWUtils.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py to multivar.cpython-38.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py to designmatrix.cpython-38.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/catalog.py to catalog.cpython-38.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/basis.py to basis.cpython-38.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py to GWUtils.cpython-38.pyc running install_egg_info running egg_info creating ccsnmultivar.egg-info writing ccsnmultivar.egg-info/PKG-INFO writing dependency_links to ccsnmultivar.egg-info/dependency_links.txt writing requirements to ccsnmultivar.egg-info/requires.txt writing top-level names to ccsnmultivar.egg-info/top_level.txt writing manifest file 'ccsnmultivar.egg-info/SOURCES.txt' reading manifest file 'ccsnmultivar.egg-info/SOURCES.txt' writing manifest file 'ccsnmultivar.egg-info/SOURCES.txt' Copying ccsnmultivar.egg-info to /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.8.egg-info running install_scripts /usr/lib/python3/site-packages/sklearn/utils/__init__.py:4: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.9 it will stop working from collections import Sequence /usr/lib/python3/site-packages/sklearn/model_selection/_split.py:18: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.9 it will stop working from collections import Iterable /usr/lib/python3/site-packages/sklearn/model_selection/_search.py:16: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.9 it will stop working from collections import Mapping, namedtuple, defaultdict, Sequence + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/python3-module-ccsnmultivar-buildroot (auto) Verifying and fixing files in /usr/src/tmp/python3-module-ccsnmultivar-buildroot (binconfig,pkgconfig,libtool,desktop) Checking contents of files in /usr/src/tmp/python3-module-ccsnmultivar-buildroot/ (default) Compressing files in /usr/src/tmp/python3-module-ccsnmultivar-buildroot (auto) Adjusting library links in /usr/src/tmp/python3-module-ccsnmultivar-buildroot ./usr/lib: Verifying ELF objects in /usr/src/tmp/python3-module-ccsnmultivar-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Bytecompiling python modules in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python2.7 Bytecompiling python modules with optimization in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python2.7 -O Bytecompiling python3 modules in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python3 unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-38.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-38.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-38.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-38.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-38.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-38.pyc compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__init__.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/basis.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/catalog.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py Bytecompiling python3 modules with optimization in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python3 -O compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__init__.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/basis.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/catalog.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py Bytecompiling python3 modules with optimization-2 in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python3 -OO compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__init__.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/basis.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/catalog.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py Hardlinking identical .pyc and .opt-?.pyc files './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-38.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-38.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-38.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-38.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-38.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-38.opt-2.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-38.opt-1.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-38.pyc' Hardlinking identical .pyc and .pyo files Executing(%check): /bin/sh -e /usr/src/tmp/rpm-tmp.36245 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python3-module-ccsnmultivar-0.0.5 + python3 setup.py test running test /usr/lib/python3/site-packages/sklearn/utils/__init__.py:4: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.9 it will stop working from collections import Sequence /usr/lib/python3/site-packages/sklearn/model_selection/_split.py:18: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.9 it will stop working from collections import Iterable /usr/lib/python3/site-packages/sklearn/model_selection/_search.py:16: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.9 it will stop working from collections import Mapping, namedtuple, defaultdict, Sequence WARNING: Testing via this command is deprecated and will be removed in a future version. Users looking for a generic test entry point independent of test runner are encouraged to use tox. running egg_info writing ccsnmultivar.egg-info/PKG-INFO writing dependency_links to ccsnmultivar.egg-info/dependency_links.txt deleting ccsnmultivar.egg-info/requires.txt writing top-level names to ccsnmultivar.egg-info/top_level.txt reading manifest file 'ccsnmultivar.egg-info/SOURCES.txt' writing manifest file 'ccsnmultivar.egg-info/SOURCES.txt' running build_ext ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK + exit 0 Processing files: python3-module-ccsnmultivar-0.0.5-alt2 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.57002 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python3-module-ccsnmultivar-0.0.5 + DOCDIR=/usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + export DOCDIR + rm -rf /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + /bin/mkdir -p /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + cp -prL AUTHORS README.md docs/index.rst Example_Catalogs /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + chmod -R go-w /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + chmod -R a+rX /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.EDmcQu find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.KyNrMu find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services) python3.req: /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py: skipping sys python3.req: /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py: line=7 possible relative import from ., UNIMPLEMENTED shebang.req.files: executable script /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py is not executable Provides: python3(ccsnmultivar), python3(ccsnmultivar.GWUtils), python3(ccsnmultivar.basis), python3(ccsnmultivar.catalog), python3(ccsnmultivar.designmatrix), python3(ccsnmultivar.multivar) Requires: python3(numpy) < 0, python3(scipy) < 0, python3(tabulate) < 0, python3(sklearn) < 0, /usr/lib/python3/site-packages, python3(csv) < 0, python3(re) < 0, python3(scipy.stats) < 0, python3(sklearn.decomposition) < 0, python3(warnings) < 0 Wrote: /usr/src/RPM/RPMS/noarch/python3-module-ccsnmultivar-0.0.5-alt2.noarch.rpm 10.51user 0.68system 0:15.27elapsed 73%CPU (0avgtext+0avgdata 57924maxresident)k 0inputs+0outputs (0major+175007minor)pagefaults 0swaps 28.11user 5.23system 0:47.04elapsed 70%CPU (0avgtext+0avgdata 108912maxresident)k 76912inputs+0outputs (0major+716844minor)pagefaults 0swaps --- python3-module-ccsnmultivar-0.0.5-alt2.noarch.rpm.repo 2019-11-13 14:12:38.000000000 +0000 +++ python3-module-ccsnmultivar-0.0.5-alt2.noarch.rpm.hasher 2020-05-29 12:04:12.585269858 +0000 @@ -1,8 +1,8 @@ /usr/lib/python3/site-packages/ccsnmultivar 40755 -/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.7.egg-info 40755 -/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.7.egg-info/PKG-INFO 100644 -/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.7.egg-info/SOURCES.txt 100644 -/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.7.egg-info/dependency_links.txt 100644 -/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.7.egg-info/requires.txt 100644 -/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.7.egg-info/top_level.txt 100644 +/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.8.egg-info 40755 +/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.8.egg-info/PKG-INFO 100644 +/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.8.egg-info/SOURCES.txt 100644 +/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.8.egg-info/dependency_links.txt 100644 +/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.8.egg-info/requires.txt 100644 +/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.8.egg-info/top_level.txt 100644 /usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py 100644 @@ -10,20 +10,20 @@ /usr/lib/python3/site-packages/ccsnmultivar/__pycache__ 40755 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-37.opt-1.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-37.opt-2.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-37.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-37.opt-1.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-37.opt-2.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-37.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-37.opt-1.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-37.opt-2.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-37.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-37.opt-1.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-37.opt-2.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-37.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-37.opt-1.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-37.opt-2.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-37.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-37.opt-1.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-37.opt-2.pyc 100644 -/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-37.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-38.opt-1.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-38.opt-2.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-38.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-38.opt-1.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-38.opt-2.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-38.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-38.opt-1.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-38.opt-2.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-38.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-38.opt-1.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-38.opt-2.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-38.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-38.opt-1.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-38.opt-2.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-38.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-38.opt-1.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-38.opt-2.pyc 100644 +/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-38.pyc 100644 /usr/lib/python3/site-packages/ccsnmultivar/basis.py 100644