<86>Apr 25 12:44:43 userdel[1328855]: delete user 'rooter' <86>Apr 25 12:44:43 userdel[1328855]: removed group 'rooter' owned by 'rooter' <86>Apr 25 12:44:43 userdel[1328855]: removed shadow group 'rooter' owned by 'rooter' <86>Apr 25 12:44:43 groupadd[1328872]: group added to /etc/group: name=rooter, GID=675 <86>Apr 25 12:44:43 groupadd[1328872]: group added to /etc/gshadow: name=rooter <86>Apr 25 12:44:43 groupadd[1328872]: new group: name=rooter, GID=675 <86>Apr 25 12:44:43 useradd[1328886]: new user: name=rooter, UID=675, GID=675, home=/root, shell=/bin/bash <86>Apr 25 12:44:43 userdel[1328915]: delete user 'builder' <86>Apr 25 12:44:43 userdel[1328915]: removed group 'builder' owned by 'builder' <86>Apr 25 12:44:43 userdel[1328915]: removed shadow group 'builder' owned by 'builder' <86>Apr 25 12:44:43 groupadd[1328929]: group added to /etc/group: name=builder, GID=676 <86>Apr 25 12:44:43 groupadd[1328929]: group added to /etc/gshadow: name=builder <86>Apr 25 12:44:43 groupadd[1328929]: new group: name=builder, GID=676 <86>Apr 25 12:44:43 useradd[1328938]: new user: name=builder, UID=676, GID=676, home=/usr/src, shell=/bin/bash <13>Apr 25 12:44:46 rpmi: libexpat-2.2.4-alt1 1503305345 installed <13>Apr 25 12:44:46 rpmi: libpng16-1.6.37-alt1 sisyphus+236677.100.2.1 1566917998 installed <13>Apr 25 12:44:46 rpmi: libjpeg-2:2.0.2-alt1 sisyphus+226996.100.1.1 1554902907 installed <13>Apr 25 12:44:46 rpmi: libnl3-3.5.0-alt1 sisyphus+237716.100.1.1 1568781468 installed <13>Apr 25 12:44:46 rpmi: libibverbs-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 25 12:44:46 rpmi: libquadmath0-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 25 12:44:47 rpmi: libgfortran5-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 25 12:44:47 rpmi: udev-rules-1:245.4-alt2 sisyphus+249711.100.1.1 1586474633 installed <13>Apr 25 12:44:47 rpmi: librdmacm-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 25 12:44:47 rpmi: libsz2-2.1-alt4 1300649104 installed <13>Apr 25 12:44:47 rpmi: libnuma-2.0.11-alt1 1450022594 installed <13>Apr 25 12:44:47 rpmi: libibumad-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 25 12:44:47 rpmi: libICE-1.0.10-alt1 sisyphus+247690.100.1.1 1584000387 installed <13>Apr 25 12:44:47 rpmi: libglvnd-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859568 installed <13>Apr 25 12:44:47 rpmi: libwayland-server-1.18.0-alt1 sisyphus+245906.100.1.1 1581492503 installed <13>Apr 25 12:44:47 rpmi: libmnl-1.0.4-alt2 sisyphus+220683.100.1.1 1549335457 installed <13>Apr 25 12:44:47 rpmi: libwebp7-1.1.0-alt1 sisyphus+243895.100.1.1 1578410873 installed <13>Apr 25 12:44:47 rpmi: gcc-fortran-common-1.4.24-alt3 sisyphus+243033.100.1.1 1576462403 installed <13>Apr 25 12:44:47 rpmi: liblz4-1:1.9.2-alt1 sisyphus+238585.100.2.2 1570066927 installed <13>Apr 25 12:44:47 rpmi: libiptables-1.8.4-alt1 sisyphus+246876.100.1.1 1582593405 installed <13>Apr 25 12:44:47 rpmi: libidn2-2.3.0-alt1 sisyphus+240846.100.1.2 1573870475 installed <13>Apr 25 12:44:47 rpmi: libdevmapper-1.02.171-alt1 sisyphus+249206.100.1.1 1585839550 installed <13>Apr 25 12:44:47 rpmi: msulogin-1.0-alt1 1366288515 installed <13>Apr 25 12:44:47 rpmi: mount-2.33.2-alt1 sisyphus+227076.100.1.1 1555076789 installed <13>Apr 25 12:44:47 rpmi: sysvinit-2.88-alt6 sisyphus+240403.100.2.1 1573520141 installed <13>Apr 25 12:44:47 rpmi: libnetlink-5.6.0-alt1 sisyphus+250342.100.1.1 1587420299 installed <13>Apr 25 12:44:47 rpmi: libSM-1.2.3-alt1 sisyphus+226734.100.2.1 1554586158 installed <13>Apr 25 12:44:47 rpmi: libibmad-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 25 12:44:47 rpmi: libibnetdisc-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 25 12:44:47 rpmi: libnuma-devel-2.0.11-alt1 1450022594 installed <13>Apr 25 12:44:47 rpmi: libquadmath9-devel-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 25 12:44:47 rpmi: libgfortran9-devel-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 25 12:44:48 rpmi: gcc9-fortran-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 25 12:44:48 rpmi: gcc-fortran-9-alt1 sisyphus+239632.300.3.1 1571788297 installed <13>Apr 25 12:44:48 rpmi: libquadmath8-devel-8.4.1-alt1 sisyphus+247375.200.3.1 1583429415 installed <13>Apr 25 12:44:48 rpmi: libgfortran8-devel-8.4.1-alt1 sisyphus+247375.200.3.1 1583429415 installed <13>Apr 25 12:44:48 rpmi: libjasper-2.0.16-alt1 sisyphus+231386.100.1.1 1559568070 installed <13>Apr 25 12:44:48 rpmi: xml-utils-1:2.9.10-alt3 sisyphus+245000.16400.79.1 1583230501 installed <13>Apr 25 12:44:48 rpmi: zlib-devel-1.2.11-alt1 sisyphus+221902.6000.4.1 1550601058 installed <13>Apr 25 12:44:48 rpmi: tcsh-6.20.00-alt2 1503603381 installed <13>Apr 25 12:44:48 rpmi: rpm-macros-mpi-selector-1.0.3-alt3 1504498675 installed <13>Apr 25 12:44:48 rpmi: mpi-selector-1.0.3-alt3 1504498675 installed <13>Apr 25 12:44:48 rpmi: openmpi-2.0.1-alt8 sisyphus+229856.100.1.1 1558540200 installed <13>Apr 25 12:44:48 rpmi: libpci-3.6.4-alt1 sisyphus+247727.100.1.1 1584020253 installed <13>Apr 25 12:44:48 rpmi: pciids-20200424-alt1 sisyphus+250589.100.1.1 1587769612 installed <13>Apr 25 12:44:48 rpmi: pciutils-3.6.4-alt1 sisyphus+247727.100.1.1 1584020253 installed <13>Apr 25 12:44:48 rpmi: libltdl7-2.4.6-alt1 sisyphus+226971.100.2.1 1554906368 installed <13>Apr 25 12:44:48 rpmi: libgts-0.7.6-alt2.drc20130205.1 sisyphus+225727.500.8.1 1553672623 installed <13>Apr 25 12:44:48 rpmi: libpaper-1.1.26-alt1 sisyphus+221360.100.1.1 1549974197 installed <13>Apr 25 12:44:48 rpmi: libopenjpeg2.0-2.3.1-alt1 sisyphus+226454.100.1.1 1554284337 installed <13>Apr 25 12:44:48 rpmi: libgtk+2-locales-2.24.32-alt4 sisyphus+248211.200.2.1 1584869557 installed <13>Apr 25 12:44:48 rpmi: libfribidi-1.0.9-alt1 sisyphus+247242.1500.7.1 1583840860 installed <13>Apr 25 12:44:48 rpmi: libdatrie-0.2.9-alt1_6 1511686676 installed <13>Apr 25 12:44:48 rpmi: libthai-0.1.28-alt1_1 sisyphus+226107.100.1.1 1554123079 installed <13>Apr 25 12:44:48 rpmi: libpixman-3:0.38.4-alt1 sisyphus+228006.100.1.1 1556013870 installed <13>Apr 25 12:44:48 rpmi: libatk-locales-2.36.0-alt1 sisyphus+249208.100.1.1 1585840405 installed <13>Apr 25 12:44:48 rpmi: libatk-2.36.0-alt1 sisyphus+249208.100.1.1 1585840406 installed <13>Apr 25 12:44:48 rpmi: libgraphite2-1.3.14-alt2 sisyphus+250009.100.1.1 1586943065 installed <13>Apr 25 12:44:48 rpmi: libharfbuzz-2.6.4-alt3 sisyphus+250007.100.2.1 1586945265 installed <13>Apr 25 12:44:48 rpmi: libfreetype-2.10.1-alt1 sisyphus+237471.100.1.1 1568276356 installed <13>Apr 25 12:44:49 rpmi: fontconfig-2.13.1-alt1 sisyphus+247349.100.1.2 1583841221 installed Updating fonts cache: <29>Apr 25 12:44:50 fontconfig: Updating fonts cache: succeeded [ DONE ] <13>Apr 25 12:44:50 rpmi: libxshmfence-1.3-alt1 sisyphus+223149.1000.2.1 1551268571 installed <13>Apr 25 12:44:50 rpmi: libX11-locales-3:1.6.9-alt1 sisyphus+239210.100.1.1 1571056781 installed <13>Apr 25 12:44:50 rpmi: libXdmcp-1.1.3-alt1 sisyphus+225206.600.1.2 1552949353 installed <13>Apr 25 12:44:50 rpmi: libXau-1.0.9-alt1 sisyphus+223149.200.2.1 1551268152 installed <13>Apr 25 12:44:50 rpmi: libxcb-1.14-alt1 sisyphus+247358.200.1.3 1583854228 installed <13>Apr 25 12:44:50 rpmi: libX11-3:1.6.9-alt1 sisyphus+239210.100.1.1 1571056801 installed <13>Apr 25 12:44:50 rpmi: libXext-1.3.4-alt1 sisyphus+225206.700.1.2 1552949429 installed <13>Apr 25 12:44:50 rpmi: libXrender-0.9.8-alt1 1371312112 installed <13>Apr 25 12:44:50 rpmi: libXt-1.2.0-alt1 sisyphus+247690.400.1.1 1584000596 installed <13>Apr 25 12:44:50 rpmi: libXmu-1.1.3-alt1 sisyphus+225206.1200.1.2 1552949641 installed <13>Apr 25 12:44:50 rpmi: libXfixes-5.0.3-alt1 sisyphus+226736.100.2.2 1554614841 installed <13>Apr 25 12:44:50 rpmi: libXpm-3.5.13-alt1 sisyphus+247690.300.1.1 1584000526 installed <13>Apr 25 12:44:50 rpmi: libXrandr-1.5.2-alt1 sisyphus+225206.1300.1.2 1552949710 installed <13>Apr 25 12:44:50 rpmi: libXxf86vm-1.1.4-alt2 1527672187 installed <13>Apr 25 12:44:50 rpmi: libXi-1.7.10-alt1 sisyphus+232786.300.1.1 1561106978 installed <13>Apr 25 12:44:50 rpmi: libXdamage-1.1.5-alt1 sisyphus+225206.500.1.2 1552949286 installed <13>Apr 25 12:44:50 rpmi: libXaw-1.0.12-alt1 1391072624 installed <13>Apr 25 12:44:50 rpmi: libXcursor-1.2.0-alt1 sisyphus+225206.400.1.2 1552949218 installed <13>Apr 25 12:44:50 rpmi: libXft-2.3.3-alt1 sisyphus+225206.1000.3.2 1552987708 installed <13>Apr 25 12:44:50 rpmi: libXinerama-1.1.4-alt1 sisyphus+223149.300.2.1 1551268216 installed <13>Apr 25 12:44:50 rpmi: libXcomposite-0.4.5-alt1 sisyphus+225206.300.1.2 1552949137 installed <13>Apr 25 12:44:50 rpmi: libwayland-client-1.18.0-alt1 sisyphus+245906.100.1.1 1581492503 installed <13>Apr 25 12:44:50 rpmi: libpciaccess-1:0.16-alt1 sisyphus+234814.100.1.1 1563438291 installed <13>Apr 25 12:44:50 rpmi: libdrm-1:2.4.101-alt1 sisyphus+249280.100.1.1 1585921684 installed <13>Apr 25 12:44:50 rpmi: libGLX-mesa-4:20.0.5-alt1 sisyphus+250506.100.1.1 1587627159 installed <13>Apr 25 12:44:50 rpmi: libGLX-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859568 installed <13>Apr 25 12:44:50 rpmi: libGL-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859568 installed <13>Apr 25 12:44:50 rpmi: libGLU-4:9.0.1-alt1 sisyphus+248864.100.1.1 1585556461 installed <13>Apr 25 12:44:50 rpmi: libfreeglut-3.2.1-alt2 sisyphus+239597.100.1.1 1571728966 installed <13>Apr 25 12:44:50 rpmi: libgbm-4:20.0.5-alt1 sisyphus+250506.100.1.1 1587627159 installed <13>Apr 25 12:44:50 rpmi: libEGL-mesa-4:20.0.5-alt1 sisyphus+250506.100.1.1 1587627159 installed <13>Apr 25 12:44:50 rpmi: libEGL-7:1.3.1-alt1 sisyphus+247547.100.1.2 1583859568 installed <13>Apr 25 12:44:50 rpmi: libcairo-1:1.16.0-alt1 sisyphus+226534.100.2.3 1554515535 installed <13>Apr 25 12:44:50 rpmi: libpango-1.44.7-alt1 sisyphus+239731.100.1.1 1571986949 installed <13>Apr 25 12:44:50 rpmi: liblasi-1.1.3-alt2 sisyphus+239300.100.1.1 1571209616 installed <13>Apr 25 12:44:50 rpmi: libpangox-compat-0.0.2-alt1 1465069388 installed <13>Apr 25 12:44:50 rpmi: libcairo-gobject-1:1.16.0-alt1 sisyphus+226534.100.2.3 1554515535 installed <13>Apr 25 12:44:50 rpmi: libatm-2.5.1-alt6 sisyphus+234093.100.1.1 1562575889 installed <13>Apr 25 12:44:50 rpmi: chrooted-0.3.11-alt1 sisyphus+249336.100.1.1 1585959537 installed <13>Apr 25 12:44:50 rpmi: chrooted-resolv-0.3.1-alt2 1176155250 installed <13>Apr 25 12:44:50 rpmi: icon-theme-hicolor-0.17-alt2 sisyphus+248343.100.1.1 1584979043 installed <13>Apr 25 12:44:50 rpmi: libjbig-2.1-alt1 1401380926 installed <13>Apr 25 12:44:50 rpmi: libtiff5-4.1.0-alt1 sisyphus+240802.100.1.1 1573743635 installed <13>Apr 25 12:44:50 rpmi: libgd3-2.3.0-alt2 sisyphus+250375.100.2.1 1587542909 installed <13>Apr 25 12:44:50 rpmi: shared-mime-info-1.15-alt1 sisyphus+240378.100.1.1 1573073800 installed <13>Apr 25 12:44:50 rpmi: libgdk-pixbuf-locales-2.40.0-alt1 sisyphus+238952.140.2.1 1570644607 installed <13>Apr 25 12:44:50 rpmi: gsettings-desktop-schemas-data-3.36.0-alt1 sisyphus+247780.300.3.2 1584198326 installed <13>Apr 25 12:44:50 rpmi: libgio-2.64.2-alt1 sisyphus+249693.100.1.1 1586451180 installed <13>Apr 25 12:44:50 rpmi: gsettings-desktop-schemas-3.36.0-alt1 sisyphus+247780.300.3.2 1584198368 installed <13>Apr 25 12:44:50 rpmi: libgdk-pixbuf-2.40.0-alt1 sisyphus+238952.140.2.1 1570644615 installed <13>Apr 25 12:44:50 rpmi: gtk-update-icon-cache-3.24.18-alt1 sisyphus+249713.100.1.1 1586500242 installed <13>Apr 25 12:44:51 rpmi: librsvg-1:2.48.4-alt1 sisyphus+250527.100.1.1 1587667450 installed <13>Apr 25 12:44:51 rpmi: gcc-c++-common-1.4.24-alt3 sisyphus+243033.100.1.1 1576462403 installed <13>Apr 25 12:44:51 rpmi: libstdc++9-devel-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 25 12:44:53 rpmi: gcc9-c++-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 25 12:44:53 rpmi: gcc-c++-9-alt1 sisyphus+239632.300.3.1 1571788297 installed <13>Apr 25 12:44:53 rpmi: udev-hwdb-1:245.4-alt2 sisyphus+249711.100.1.1 1586474633 installed <13>Apr 25 12:44:53 rpmi: libseccomp-2.4.2-alt2 sisyphus+245295.100.1.1 1580406865 installed <13>Apr 25 12:44:53 rpmi: libpcre2-10.34-alt1 sisyphus+241619.100.1.1 1574686794 installed <13>Apr 25 12:44:53 rpmi: libjson-c4-0.13.1-alt1 sisyphus+226468.100.8.1 1554723266 installed <13>Apr 25 12:44:53 rpmi: libargon2-20190702-alt1 sisyphus+235300.100.1.1 1564606540 installed <13>Apr 25 12:44:53 rpmi: libgpg-error-1.36-alt1 sisyphus+225621.300.1.1 1553521082 installed <13>Apr 25 12:44:53 rpmi: libgcrypt20-1.8.5-alt3 sisyphus+239622.100.1.1 1571746654 installed <13>Apr 25 12:44:53 rpmi: libsystemd-1:245.4-alt2 sisyphus+249711.100.1.1 1586474686 installed <13>Apr 25 12:44:53 rpmi: libdbus-1.12.16-alt2 sisyphus+240566.100.2.1 1573547696 installed <13>Apr 25 12:44:53 rpmi: libavahi-0.7-alt3 sisyphus+250384.100.2.1 1587547019 installed <13>Apr 25 12:44:53 rpmi: libcups-2.3.1-alt1 sisyphus+247381.100.2.2 1583841455 installed <13>Apr 25 12:44:54 rpmi: libgtk+2-2.24.32-alt4 sisyphus+248211.200.2.1 1584869549 installed <13>Apr 25 12:44:54 rpmi: libgtkglext-1.2.0-alt4 1526376551 installed <13>Apr 25 12:44:54 rpmi: libglade-2.6.4-alt5.qa1 1366416177 installed <13>Apr 25 12:44:56 rpmi: libgs-9.28-alt0.rc1.1 sisyphus+237325.100.1.1 1568104012 installed <13>Apr 25 12:44:56 rpmi: libgraphviz-2.41.2-alt3 sisyphus+248120.100.2.1 1584721871 installed <13>Apr 25 12:44:56 rpmi: hwclock-1:2.33.2-alt1 sisyphus+227076.100.1.1 1555076789 installed <13>Apr 25 12:44:56 rpmi: hashalot-0.3-alt1.qa1 1366323553 installed <13>Apr 25 12:44:56 rpmi: losetup-2.33.2-alt1 sisyphus+227076.100.1.1 1555076789 installed <13>Apr 25 12:44:56 rpmi: lsblk-2.33.2-alt1 sisyphus+227076.100.1.1 1555076789 installed <13>Apr 25 12:44:56 rpmi: python-modules-curses-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:56 rpmi: libgdbm-1.8.3-alt10 1454943334 installed <13>Apr 25 12:44:56 rpmi: libtinfo-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686226 installed <13>Apr 25 12:44:56 rpmi: libncurses-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686226 installed <13>Apr 25 12:44:56 rpmi: libverto-0.3.0-alt1_7 sisyphus+225932.100.1.1 1553994919 installed <13>Apr 25 12:44:56 rpmi: libkeyutils-1.6-alt2 sisyphus+226520.100.2.1 1554512089 installed <13>Apr 25 12:44:56 rpmi: libp11-kit-0.23.15-alt1 sisyphus+226408.100.2.1 1554288204 installed <13>Apr 25 12:44:56 rpmi: libtasn1-4.16.0-alt1 sisyphus+245480.100.1.1 1580825062 installed <13>Apr 25 12:44:56 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Apr 25 12:44:56 rpmi: alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Apr 25 12:44:56 rpmi: ca-certificates-2020.01.23-alt1 sisyphus+244791.300.2.1 1580285500 installed <13>Apr 25 12:44:56 rpmi: ca-trust-0.1.2-alt1 sisyphus+233348.100.1.1 1561653823 installed <13>Apr 25 12:44:56 rpmi: p11-kit-trust-0.23.15-alt1 sisyphus+226408.100.2.1 1554288204 installed <13>Apr 25 12:44:56 rpmi: libcrypto1.1-1.1.1g-alt1 sisyphus+249982.60.8.1 1587743711 installed <13>Apr 25 12:44:56 rpmi: libkmod-26-alt1 sisyphus+226359.100.1.1 1554129990 installed <13>Apr 25 12:44:56 rpmi: kmod-26-alt1 sisyphus+226359.100.1.1 1554129990 installed <13>Apr 25 12:44:57 rpmi: libssl1.1-1.1.1g-alt1 sisyphus+249982.60.8.1 1587743711 installed <13>Apr 25 12:44:57 rpmi: libcryptsetup-2.2.2-alt1 sisyphus+242851.300.2.1 1576248426 installed <13>Apr 25 12:44:57 rpmi: startup-0.9.9.9-alt1 sisyphus+242122.100.1.1 1575282386 installed <13>Apr 25 12:44:57 rpmi: systemd-utils-1:245.4-alt2 sisyphus+249711.100.1.1 1586474686 installed <13>Apr 25 12:44:57 rpmi: dmsetup-1.02.171-alt1 sisyphus+249206.100.1.1 1585839550 installed <86>Apr 25 12:44:57 groupadd[1358211]: group added to /etc/group: name=tape, GID=499 <86>Apr 25 12:44:57 groupadd[1358211]: group added to /etc/gshadow: name=tape <86>Apr 25 12:44:57 groupadd[1358211]: new group: name=tape, GID=499 <86>Apr 25 12:44:57 groupadd[1358241]: group added to /etc/group: name=dialout, GID=498 <86>Apr 25 12:44:57 groupadd[1358241]: group added to /etc/gshadow: name=dialout <86>Apr 25 12:44:57 groupadd[1358241]: new group: name=dialout, GID=498 <86>Apr 25 12:44:57 groupadd[1358264]: group added to /etc/group: name=input, GID=497 <86>Apr 25 12:44:57 groupadd[1358264]: group added to /etc/gshadow: name=input <86>Apr 25 12:44:57 groupadd[1358264]: new group: name=input, GID=497 <86>Apr 25 12:44:57 groupadd[1358277]: group added to /etc/group: name=video, GID=496 <86>Apr 25 12:44:57 groupadd[1358277]: group added to /etc/gshadow: name=video <86>Apr 25 12:44:57 groupadd[1358277]: new group: name=video, GID=496 <86>Apr 25 12:44:57 groupadd[1358293]: group added to /etc/group: name=render, GID=495 <86>Apr 25 12:44:57 groupadd[1358293]: group added to /etc/gshadow: name=render <86>Apr 25 12:44:57 groupadd[1358293]: new group: name=render, GID=495 <13>Apr 25 12:44:57 rpmi: udev-1:245.4-alt2 sisyphus+249711.100.1.1 1586474686 installed <86>Apr 25 12:44:57 groupadd[1358622]: group added to /etc/group: name=iputils, GID=494 <86>Apr 25 12:44:57 groupadd[1358622]: group added to /etc/gshadow: name=iputils <86>Apr 25 12:44:57 groupadd[1358622]: new group: name=iputils, GID=494 <86>Apr 25 12:44:57 useradd[1358647]: new user: name=iputils, UID=499, GID=494, home=/dev/null, shell=/dev/null <86>Apr 25 12:44:57 groupadd[1358671]: group added to /etc/group: name=netadmin, GID=493 <86>Apr 25 12:44:57 groupadd[1358671]: group added to /etc/gshadow: name=netadmin <86>Apr 25 12:44:57 groupadd[1358671]: new group: name=netadmin, GID=493 <13>Apr 25 12:44:57 rpmi: iputils-20190709-alt2 sisyphus+241803.100.2.1 1575176404 installed sysctl: cannot stat /proc/sys/net/ipv4/ping_group_range: No such file or directory <13>Apr 25 12:44:57 rpmi: iproute2-5.6.0-alt1 sisyphus+250342.100.1.1 1587420299 installed <13>Apr 25 12:44:57 rpmi: rdma-core-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 25 12:44:57 rpmi: ibacm-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 25 12:44:57 rpmi: rdma-core-devel-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 25 12:44:57 rpmi: openmpi-devel-2.0.1-alt8 sisyphus+229856.100.1.1 1558540200 installed <13>Apr 25 12:44:57 rpmi: libhdf5-8-mpi-1.8.13-alt4 sisyphus+223496.100.1.1 1551620849 installed <13>Apr 25 12:44:57 rpmi: libcom_err-1.44.6-alt1 sisyphus+224154.100.1.1 1552091678 installed <86>Apr 25 12:44:57 groupadd[1360477]: group added to /etc/group: name=_keytab, GID=492 <86>Apr 25 12:44:57 groupadd[1360477]: group added to /etc/gshadow: name=_keytab <86>Apr 25 12:44:57 groupadd[1360477]: new group: name=_keytab, GID=492 <13>Apr 25 12:44:58 rpmi: libkrb5-1.17.1-alt1 sisyphus+242784.100.1.1 1576137330 installed <13>Apr 25 12:44:58 rpmi: libtirpc-1.2.6-alt1 sisyphus+250076.100.1.1 1587038270 installed <13>Apr 25 12:44:58 rpmi: libnsl2-1.1.0-alt1_1 1511548749 installed <13>Apr 25 12:44:58 rpmi: python-modules-compiler-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-email-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-unittest-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-encodings-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-nis-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-xml-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-hotshot-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-bsddb-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-ctypes-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-multiprocessing-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-logging-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: python-modules-distutils-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: libnsl2-devel-1.1.0-alt1_1 1511548749 installed <13>Apr 25 12:44:58 rpmi: python-dev-2.7.17-alt4 sisyphus+244873.100.2.1 1581419544 installed <13>Apr 25 12:44:58 rpmi: libhdf5-mpi-devel-1.8.13-alt4 sisyphus+223496.100.1.1 1551620849 installed <13>Apr 25 12:44:59 rpmi: graphviz-2.41.2-alt3 sisyphus+248120.100.2.1 1584721871 installed <13>Apr 25 12:44:59 rpmi: libsz2-devel-2.1-alt4 1300649104 installed <13>Apr 25 12:44:59 rpmi: doxygen-1:1.8.15-alt1 sisyphus+220984.100.1.2 1549663873 installed <13>Apr 25 12:44:59 rpmi: chrpath-0.16-alt1 1453066316 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/h5part-mpi-1.6.6-alt5.nosrc.rpm Installing h5part-mpi-1.6.6-alt5.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.26883 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf h5part-mpi-1.6.6 + echo 'Source #0 (H5Part-1.6.6.tar.gz):' Source #0 (H5Part-1.6.6.tar.gz): + /bin/gzip -dc /usr/src/RPM/SOURCES/H5Part-1.6.6.tar.gz + /bin/tar -xf - + cd h5part-mpi-1.6.6 + /bin/chmod -c -Rf u+rwX,go-w . + rm -f aclocal.m4 + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.5744 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd h5part-mpi-1.6.6 + mpi-selector --set openmpi + source /usr/lib/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib/openmpi/bin ++ PATH=/usr/lib/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib/openmpi/man ++ MANPATH=/usr/lib/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib' + autoreconf -fisv autoreconf-default: Entering directory `.' autoreconf-default: configure.ac: not using Gettext autoreconf-default: running: aclocal --force -I m4 configure.ac:201: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4207: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5339: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:201: the top level configure.ac:201: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4207: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5339: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:201: the top level configure.ac:201: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:5424: _LT_LANG_CXX_CONFIG is expanded from... m4/libtool.m4:816: _LT_LANG is expanded from... m4/libtool.m4:799: LT_LANG is expanded from... m4/libtool.m4:827: _LT_LANG_DEFAULT_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:201: the top level configure.ac:201: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4207: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5339: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:201: the top level configure.ac:201: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4207: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5339: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:201: the top level configure.ac:201: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:5424: _LT_LANG_CXX_CONFIG is expanded from... m4/libtool.m4:816: _LT_LANG is expanded from... m4/libtool.m4:799: LT_LANG is expanded from... m4/libtool.m4:827: _LT_LANG_DEFAULT_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:201: the top level autoreconf-default: configure.ac: tracing configure.ac:201: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4207: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5339: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:201: the top level configure.ac:201: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4207: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5339: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:201: the top level configure.ac:201: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:5424: _LT_LANG_CXX_CONFIG is expanded from... m4/libtool.m4:816: _LT_LANG is expanded from... m4/libtool.m4:799: LT_LANG is expanded from... m4/libtool.m4:827: _LT_LANG_DEFAULT_CONFIG is expanded from... m4/libtool.m4:143: _LT_SETUP is expanded from... m4/libtool.m4:69: LT_INIT is expanded from... configure.ac:201: the top level autoreconf-default: running: libtoolize --force --install libtoolize-default: putting auxiliary files in '.'. libtoolize-default: linking file './config.guess' libtoolize-default: linking file './config.sub' libtoolize-default: linking file './install-sh' libtoolize-default: linking file './ltmain.sh' libtoolize-default: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize-default: linking file 'm4/libtool.m4' libtoolize-default: linking file 'm4/ltoptions.m4' libtoolize-default: linking file 'm4/ltsugar.m4' libtoolize-default: linking file 'm4/ltversion.m4' libtoolize-default: linking file 'm4/lt~obsolete.m4' autoreconf-default: configure.ac: not using Intltool autoreconf-default: configure.ac: not using gtk-doc autoreconf-default: running: /usr/bin/autoconf-2.60 --force autoreconf-default: running: /usr/bin/autoheader-2.60 --force autoreconf-default: running: automake --add-missing --force-missing configure.ac:110: installing './compile' configure.ac:18: installing './missing' configure.ac:318: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:318: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') configure.ac:318: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/Makefile.am: installing './depcomp' test/Makefile.am:5: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') parallel-tests: installing './test-driver' test/Makefile.am:23: warning: variable 'testf_SOURCES' is defined but no program or test/Makefile.am:23: library has 'testf' as canonical name (possible typo) test/Makefile.am:24: warning: variable 'testf_LDADD' is defined but no program or test/Makefile.am:24: library has 'testf' as canonical name (possible typo) tools/Makefile.am:5: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') autoreconf-default: Leaving directory `.' + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC' + export FFLAGS + '[' -n '' ']' ++ printf %s '-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS=' -march=i586 -mtune=generic' + export ASFLAGS + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + ./configure --build=i586-alt-linux --host=i586-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --disable-silent-rules --without-included-gettext --enable-parallel --with-mpipath=/usr/lib/openmpi --prefix=/usr/lib/openmpi --bindir=/usr/lib/openmpi/bin --libdir=/usr/lib/openmpi/lib --includedir=/usr/lib/openmpi/include --enable-shared --enable-fortran --enable-tools --enable-python --with-hdf5path=/usr/lib/openmpi --with-hdf5=/usr/lib/openmpi configure: WARNING: unrecognized options: --without-included-gettext, --with-mpipath, --enable-python, --with-hdf5path checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... i586-alt-linux-gnu checking host system type... i586-alt-linux-gnu checking whether make sets $(MAKE)... (cached) yes checking for i586-alt-linux-mpicc... no checking for i586-alt-linux-cc... no checking for mpicc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether mpicc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mpicc... none checking for i586-alt-linux-mpic++... no checking for i586-alt-linux-mpicxx... no checking for i586-alt-linux-CC... no checking for mpic++... mpic++ checking whether we are using the GNU C++ compiler... yes checking whether mpic++ accepts -g... yes checking dependency style of mpic++... none checking for gawk... (cached) gawk checking if debug is enabled... no checking if fortran interface enabled... yes checking for i586-alt-linux-mpif90... no checking for i586-alt-linux-mpif77... no checking for i586-alt-linux-ftn... no checking for mpif90... mpif90 checking whether we are using the GNU Fortran compiler... yes checking whether mpif90 accepts -g... yes checking symbol convention in object files... ok checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i586-alt-linux-gnu file names to i586-alt-linux-gnu format... func_convert_file_noop checking how to convert i586-alt-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for i586-alt-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... (cached) pass_all checking for i586-alt-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for i586-alt-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for i586-alt-linux-strip... no checking for strip... strip checking for i586-alt-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for i586-alt-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mpicc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... mpic++ -E checking for ld used by mpic++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the mpic++ linker (/usr/bin/ld) supports shared libraries... yes checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for mpif90 option to produce PIC... -fPIC checking if mpif90 PIC flag -fPIC works... yes checking if mpif90 static flag -static works... no checking if mpif90 supports -c -o file.o... yes checking if mpif90 supports -c -o file.o... (cached) yes checking whether the mpif90 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if parallel interface enabled... yes checking if we can compile MPI code without setting flags... yes checking whether tools are enabled... yes checking for HDF5 root ... checking looking in /usr/lib/openmpi ... ... found checking if we need to link to libsz ... no checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for int64_t... yes checking for size_t... yes checking for ssize_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for memset... yes checking for pow... yes checking for strchr... yes checking for strdup... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating doc/Makefile config.status: creating test/Makefile config.status: creating tools/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --without-included-gettext, --with-mpipath, --enable-python, --with-hdf5path Summary: Host OS: linux-gnu Host CPU: i586 Host vendor: alt Build libraries: libH5Part libH5PartF Build test programs: test testf Build tools: h5pAttrib h5pToGNUplot homdynToH5p H5PartBench H5BlockBench CC = mpicc CXX = mpic++ FC = mpif90 CFLAGS = -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK CXXFLAGS = -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK FFLAGS = -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO INCLUDES = -I/usr/lib/openmpi/include LDFLAGS = -L/usr/lib/openmpi/lib LIBS = -lhdf5 -lz -lm HDF5ROOT = /usr/lib/openmpi + make -j8 make all-recursive Making all in doc make[2]: Nothing to be done for 'all'. Making all in src make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5PartAttrib.lo H5PartAttrib.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5PartAttrib.c -fPIC -DPIC -o .libs/H5PartAttrib.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5PartAttrib.c -o H5PartAttrib.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5PartF.lo H5PartF.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5PartF.c -fPIC -DPIC -o .libs/H5PartF.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5PartF.c -o H5PartF.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5MultiBlockReadWrite.lo H5MultiBlockReadWrite.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5MultiBlockReadWrite.c -fPIC -DPIC -o .libs/H5MultiBlockReadWrite.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5MultiBlockReadWrite.c -o H5MultiBlockReadWrite.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5PartAttribF.lo H5PartAttribF.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5PartAttribF.c -fPIC -DPIC -o .libs/H5PartAttribF.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5PartAttribF.c -o H5PartAttribF.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5BlockReadWriteF.lo H5BlockReadWriteF.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5BlockReadWriteF.c -fPIC -DPIC -o .libs/H5BlockReadWriteF.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5BlockReadWriteF.c -o H5BlockReadWriteF.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5BlockF.lo H5BlockF.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5BlockF.c -fPIC -DPIC -o .libs/H5BlockF.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5BlockF.c -o H5BlockF.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5BlockReadWrite.lo H5BlockReadWrite.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5BlockReadWrite.c -fPIC -DPIC -o .libs/H5BlockReadWrite.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5BlockReadWrite.c -o H5BlockReadWrite.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5Part.lo H5Part.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5Part.c -fPIC -DPIC -o .libs/H5Part.o H5Part.c: In function '_H5Part_open_file': H5Part.c:249:8: warning: implicit declaration of function 'H5Pset_fapl_mpiposix'; did you mean 'H5Pset_fapl_mpio'? [-Wimplicit-function-declaration] 249 | if (H5Pset_fapl_mpiposix ( f->access_prop, comm, 0 ) < 0) { | ^~~~~~~~~~~~~~~~~~~~ | H5Pset_fapl_mpio H5Part.c: In function '_H5Part_get_num_objects_matching_pattern': H5Part.c:2276:6: warning: unused variable 'idx' [-Wunused-variable] 2276 | int idx = 0; | ^~~ H5Part.c: In function '_H5Part_get_object_name': H5Part.c:2325:6: warning: unused variable 'iterator_idx' [-Wunused-variable] 2325 | int iterator_idx = 0; | ^~~~~~~~~~~~ H5Part.c: In function 'H5PartSetCanonicalView': H5Part.c:3081:17: warning: unused variable 'pertask' [-Wunused-variable] 3081 | h5part_int64_t pertask = 0; | ^~~~~~~ libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5Part.c -o H5Part.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5MultiBlock.lo H5MultiBlock.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5MultiBlock.c -fPIC -DPIC -o .libs/H5MultiBlock.o H5MultiBlock.c: In function '_get_decomp_and_offsets': H5MultiBlock.c:133:48: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 133 | _H5Part_print_info ("Block decomposition: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld 134 | mb->decomp[2], | ~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:133:52: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 133 | _H5Part_print_info ("Block decomposition: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld 134 | mb->decomp[2], 135 | mb->decomp[1], | ~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:133:56: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 133 | _H5Part_print_info ("Block decomposition: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld ...... 136 | mb->decomp[0] ); | ~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:139:58: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 139 | _H5Part_print_debug ("PROC[%d]: Block decomposition: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld 140 | f->myproc, 141 | mb->decomp[2], | ~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:139:62: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 139 | _H5Part_print_debug ("PROC[%d]: Block decomposition: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld ...... 142 | mb->decomp[1], | ~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:139:66: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 139 | _H5Part_print_debug ("PROC[%d]: Block decomposition: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld ...... 143 | mb->decomp[0] ); | ~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:162:52: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 162 | _H5Part_print_debug ("PROC[%d]: Block offsets: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld 163 | f->myproc, 164 | mb->offsets[2], | ~~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:162:56: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 162 | _H5Part_print_debug ("PROC[%d]: Block offsets: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld ...... 165 | mb->offsets[1], | ~~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:162:60: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 162 | _H5Part_print_debug ("PROC[%d]: Block offsets: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld ...... 166 | mb->offsets[0] ); | ~~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:171:44: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 171 | _H5Part_print_info ("Number of blocks: %ld", nblocks); | ~~^ ~~~~~~~ | | | | | h5part_int64_t {aka long long int} | long int | %lld H5MultiBlock.c: In function '_H5MultiBlock_read_data': H5MultiBlock.c:858:45: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 858 | _H5Part_print_info ("Block dimensions: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld 859 | mb->block_dims[2], | ~~~~~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:858:49: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 858 | _H5Part_print_info ("Block dimensions: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld 859 | mb->block_dims[2], 860 | mb->block_dims[1], | ~~~~~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:858:53: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 858 | _H5Part_print_info ("Block dimensions: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld ...... 861 | mb->block_dims[0] ); | ~~~~~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:864:55: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 864 | _H5Part_print_debug ("PROC[%d]: Block dimensions: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld 865 | f->myproc, 866 | mb->block_dims[2], | ~~~~~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:864:59: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 864 | _H5Part_print_debug ("PROC[%d]: Block dimensions: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld ...... 867 | mb->block_dims[1], | ~~~~~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} H5MultiBlock.c:864:63: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 864 | _H5Part_print_debug ("PROC[%d]: Block dimensions: (%ld,%ld,%ld)", | ~~^ | | | long int | %lld ...... 868 | mb->block_dims[0] ); | ~~~~~~~~~~~~~~~~~ | | | h5part_int64_t {aka long long int} At top level: H5MultiBlock.c:545:1: warning: '_halo_exchange_buffers' defined but not used [-Wunused-function] 545 | _halo_exchange_buffers ( | ^~~~~~~~~~~~~~~~~~~~~~ H5MultiBlock.c:94:1: warning: '_H5MultiBlock_file_is_valid' defined but not used [-Wunused-function] 94 | _H5MultiBlock_file_is_valid ( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5MultiBlock.c -o H5MultiBlock.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5Block.lo H5Block.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5Block.c -fPIC -DPIC -o .libs/H5Block.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5Block.c -o H5Block.o >/dev/null 2>&1 make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=link mpicc -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -version-info 0:0:0 -L/usr/lib/openmpi/lib -o libH5Part.la -rpath /usr/lib/openmpi/lib H5Part.lo H5PartAttrib.lo H5Block.lo H5BlockReadWrite.lo H5MultiBlock.lo H5MultiBlockReadWrite.lo -lhdf5 -lz -lm libtool: link: mpicc -shared -fPIC -DPIC .libs/H5Part.o .libs/H5PartAttrib.o .libs/H5Block.o .libs/H5BlockReadWrite.o .libs/H5MultiBlock.o .libs/H5MultiBlockReadWrite.o -L/usr/lib/openmpi/lib -lhdf5 -lz -lm -g -O2 -march=i586 -mtune=generic -Wl,-soname -Wl,libH5Part.so.0 -o .libs/libH5Part.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libH5Part.so.0" && ln -s "libH5Part.so.0.0.0" "libH5Part.so.0") libtool: link: (cd ".libs" && rm -f "libH5Part.so" && ln -s "libH5Part.so.0.0.0" "libH5Part.so") libtool: link: ar cr .libs/libH5Part.a H5Part.o H5PartAttrib.o H5Block.o H5BlockReadWrite.o H5MultiBlock.o H5MultiBlockReadWrite.o libtool: link: ranlib .libs/libH5Part.a libtool: link: ( cd ".libs" && rm -f "libH5Part.la" && ln -s "../libH5Part.la" "libH5Part.la" ) make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/sh ../libtool --tag=CC --mode=link mpicc -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -version-info 0:0:0 -rpath '/usr/lib/openmpi/lib' -L/usr/lib/openmpi/lib -o libH5PartF.la H5Part.lo H5PartAttrib.lo H5Block.lo H5BlockReadWrite.lo H5MultiBlock.lo H5MultiBlockReadWrite.lo H5PartF.lo H5PartAttribF.lo H5BlockF.lo H5BlockReadWriteF.lo -lhdf5 -lz -lm libtool: link: mpicc -shared -fPIC -DPIC .libs/H5Part.o .libs/H5PartAttrib.o .libs/H5Block.o .libs/H5BlockReadWrite.o .libs/H5MultiBlock.o .libs/H5MultiBlockReadWrite.o .libs/H5PartF.o .libs/H5PartAttribF.o .libs/H5BlockF.o .libs/H5BlockReadWriteF.o -L/usr/lib/openmpi/lib -lhdf5 -lz -lm -g -O2 -march=i586 -mtune=generic -Wl,-soname -Wl,libH5PartF.so.0 -o .libs/libH5PartF.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libH5PartF.so.0" && ln -s "libH5PartF.so.0.0.0" "libH5PartF.so.0") libtool: link: (cd ".libs" && rm -f "libH5PartF.so" && ln -s "libH5PartF.so.0.0.0" "libH5PartF.so") libtool: link: ar cr .libs/libH5PartF.a H5Part.o H5PartAttrib.o H5Block.o H5BlockReadWrite.o H5MultiBlock.o H5MultiBlockReadWrite.o H5PartF.o H5PartAttribF.o H5BlockF.o H5BlockReadWriteF.o libtool: link: ranlib .libs/libH5PartF.a libtool: link: ( cd ".libs" && rm -f "libH5PartF.la" && ln -s "../libH5PartF.la" "libH5PartF.la" ) make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' Making all in tools make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o h5pToGNUplot.o h5pToGNUplot.cc h5pToGNUplot.cc: In function 'int main(int, const char**)': h5pToGNUplot.cc:447:16: warning: 'type_2' may be used uninitialized in this function [-Wmaybe-uninitialized] 447 | else if (type_2 == H5T_NATIVE_DOUBLE) | ^~ h5pToGNUplot.cc:442:16: warning: 'type_1' may be used uninitialized in this function [-Wmaybe-uninitialized] 442 | else if (type_1 == H5T_NATIVE_DOUBLE) | ^~ make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o homdynToH5p.o homdynToH5p.cc homdynToH5p.cc: In function 'int main(int, char**)': homdynToH5p.cc:137:9: warning: variable 'rc' set but not used [-Wunused-but-set-variable] 137 | int rc; | ^~ make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' mpic++ -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o h5pAttrib.o h5pAttrib.cc In file included from /usr/include/stdio.h:867, from h5pAttrib.cc:7: In function 'int fprintf(FILE*, const char*, ...)', inlined from 'void print_attrib(H5PartFile*, h5part_int64_t, h5part_int64_t (*)(H5PartFile*, h5part_int64_t, char*, h5part_int64_t, h5part_int64_t*, h5part_int64_t*), h5part_int64_t (*)(H5PartFile*, const char*, void*))' at h5pAttrib.cc:443:10, inlined from 'void print_step_attribute(H5PartFile*, h5part_int64_t)' at h5pAttrib.cc:499:15, inlined from 'void _print_step_attributes(H5PartFile*, h5part_int64_t)' at h5pAttrib.cc:513:24: /usr/include/bits/stdio2.h:100:24: warning: '%s' directive argument is null [-Wformat-overflow=] 100 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In function 'int fprintf(FILE*, const char*, ...)', inlined from 'void print_attrib(H5PartFile*, h5part_int64_t, h5part_int64_t (*)(H5PartFile*, h5part_int64_t, char*, h5part_int64_t, h5part_int64_t*, h5part_int64_t*), h5part_int64_t (*)(H5PartFile*, const char*, void*))' at h5pAttrib.cc:443:10, inlined from 'void print_file_attribute(H5PartFile*, h5part_int64_t)' at h5pAttrib.cc:477:15, inlined from 'void print_file_attributes(H5PartFile*, char*)' at h5pAttrib.cc:490:24: /usr/include/bits/stdio2.h:100:24: warning: '%s' directive argument is null [-Wformat-overflow=] 100 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5PartBench.o H5PartBench.c H5PartBench.c: In function 'write_data': H5PartBench.c:235:29: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'h5part_int64_t' {aka 'long long int'} [-Wformat=] 235 | printf ("rank %d: %ld particles\n", p->rank, p->particles); | ~~^ ~~~~~~~~~~~~ | | | | long int h5part_int64_t {aka long long int} | %lld H5PartBench.c: In function 'main': H5PartBench.c:381:16: warning: 'write_mean' may be used uninitialized in this function [-Wmaybe-uninitialized] 381 | write_mean /= p.repetitions; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' /bin/sh ../libtool --tag=CXX --mode=link mpic++ -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -L/usr/lib/openmpi/lib -o homdynToH5p homdynToH5p.o ../src/libH5Part.la -lhdf5 -lz -lm libtool: link: mpic++ -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -o .libs/homdynToH5p homdynToH5p.o -L/usr/lib/openmpi/lib ../src/.libs/libH5Part.so -lhdf5 -lz -lm -Wl,-rpath -Wl,/usr/lib/openmpi/lib make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/lib/openmpi/include -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5BlockBench.o H5BlockBench.c H5BlockBench.c: In function 'main': H5BlockBench.c:478:16: warning: 'write_mean' may be used uninitialized in this function [-Wmaybe-uninitialized] 478 | write_mean /= p.repetitions; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' /bin/sh ../libtool --tag=CXX --mode=link mpic++ -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -L/usr/lib/openmpi/lib -o h5pToGNUplot h5pToGNUplot.o ../src/libH5Part.la -lhdf5 -lz -lm libtool: link: mpic++ -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -o .libs/h5pToGNUplot h5pToGNUplot.o -L/usr/lib/openmpi/lib ../src/.libs/libH5Part.so -lhdf5 -lz -lm -Wl,-rpath -Wl,/usr/lib/openmpi/lib make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' /bin/sh ../libtool --tag=CC --mode=link mpicc -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -L/usr/lib/openmpi/lib -o H5PartBench H5PartBench.o ../src/libH5Part.la -lhdf5 -lz -lm libtool: link: mpicc -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -o .libs/H5PartBench H5PartBench.o -L/usr/lib/openmpi/lib ../src/.libs/libH5Part.so -lhdf5 -lz -lm -Wl,-rpath -Wl,/usr/lib/openmpi/lib make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' /bin/sh ../libtool --tag=CXX --mode=link mpic++ -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -L/usr/lib/openmpi/lib -o h5pAttrib h5pAttrib.o ../src/libH5Part.la -lhdf5 -lz -lm libtool: link: mpic++ -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -o .libs/h5pAttrib h5pAttrib.o -L/usr/lib/openmpi/lib ../src/.libs/libH5Part.so -lhdf5 -lz -lm -Wl,-rpath -Wl,/usr/lib/openmpi/lib make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' /bin/sh ../libtool --tag=CC --mode=link mpicc -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -L/usr/lib/openmpi/lib -o H5BlockBench H5BlockBench.o ../src/libH5Part.la -lhdf5 -lz -lm libtool: link: mpicc -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -fPIC -DPIC -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -o .libs/H5BlockBench H5BlockBench.o -L/usr/lib/openmpi/lib ../src/.libs/libH5Part.so -lhdf5 -lz -lm -Wl,-rpath -Wl,/usr/lib/openmpi/lib make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' + pushd doc ~/RPM/BUILD/h5part-mpi-1.6.6/doc ~/RPM/BUILD/h5part-mpi-1.6.6 + doxygen warning: Tag `USE_WINDOWS_ENCODING' at line 11 of file `Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `DETAILS_AT_TOP' at line 33 of file `Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `SHOW_DIRECTORIES' at line 70 of file `Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `HTML_ALIGN_MEMBERS' at line 132 of file `Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `XML_SCHEMA' at line 179 of file `Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `XML_DTD' at line 180 of file `Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `MAX_DOT_GRAPH_WIDTH' at line 232 of file `Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag `MAX_DOT_GRAPH_HEIGHT' at line 233 of file `Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.c:2740: warning: Member H5PartResetView(H5PartFile *f) (function) of group h5part_model is not documented. /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.c:2755: warning: Member H5PartHasView(H5PartFile *f) (function) of group h5part_model is not documented. /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.f90:455: warning: The following parameters of h5pt_getfileattribinfo(integer *8, intent(in) filehandle, idx, attrib_name, attrib_nelem) are not documented: parameter 'idx' parameter 'attrib_name' parameter 'attrib_nelem' /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.f90:444: warning: The following parameters of h5pt_getstepattribinfo(integer *8, intent(in) filehandle, idx, attrib_name, attrib_nelem) are not documented: parameter 'idx' parameter 'attrib_name' parameter 'attrib_nelem' /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.f90:407: warning: The following parameters of h5pt_readfileattrib_string(integer *8, intent(in) filehandle, attrib_name, attrib_value) are not documented: parameter 'attrib_name' parameter 'attrib_value' /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.f90:418: warning: The following parameters of h5pt_readstepattrib_string(integer *8, intent(in) filehandle, attrib_name, attrib_value) are not documented: parameter 'attrib_name' parameter 'attrib_value' /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.f90:386: warning: The following parameters of h5pt_writefileattrib_string(integer *8, intent(in) filehandle, attrib_name, attrib_value) are not documented: parameter 'attrib_name' parameter 'attrib_value' /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.f90:396: warning: The following parameters of h5pt_writestepattrib_string(integer *8, intent(in) filehandle, attrib_name, attrib_value) are not documented: parameter 'attrib_name' parameter 'attrib_value' sh: latex: command not found error: Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log! sh: dvips: command not found error: Problems running dvips. Check your installation! Notice: Output directory `./ReferencePages' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Reading and parsing tag files Parsing files Preprocessing /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.c... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.c... Preprocessing /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5PartAttrib.c... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5PartAttrib.c... Preprocessing /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Block.c... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Block.c... Preprocessing /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5BlockReadWrite.c... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5BlockReadWrite.c... Preprocessing /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5MultiBlock.c... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5MultiBlock.c... Preprocessing /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5MultiBlockReadWrite.c... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5MultiBlockReadWrite.c... Reading /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.f90... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Part.f90... Reading /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5PartAttrib.f90... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5PartAttrib.f90... Reading /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Block.f90... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5Block.f90... Reading /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5BlockReadWrite.f90... Parsing file /usr/src/RPM/BUILD/h5part-mpi-1.6.6/src/H5BlockReadWrite.f90... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Associating documentation with classes... Computing nesting relations for classes... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Freeing entry tree Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Computing dependencies between directories... Generating citations page... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating file documentation... Generating page documentation... Generating group documentation... Generating class documentation... Generating namespace index... Generating graph info page... Generating directory documentation... Generating bitmaps for formulas in HTML... Generating image form_0.png for formula Generating index page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... lookup cache used 192/65536 hits=192 misses=192 finished... + popd ~/RPM/BUILD/h5part-mpi-1.6.6 + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.90629 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/h5part-mpi-buildroot + : + /bin/rm -rf -- /usr/src/tmp/h5part-mpi-buildroot + cd h5part-mpi-1.6.6 + source /usr/lib/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib/openmpi/bin ++ PATH=/usr/lib/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib/openmpi/man ++ MANPATH=/usr/lib/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib' + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/h5part-mpi-buildroot make: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6' Making install in doc make[1]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/doc' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/doc' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/doc' make[1]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/doc' Making install in src make[1]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' /bin/mkdir -p '/usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib' /bin/sh ../libtool --mode=install /bin/install -p libH5Part.la libH5PartF.la '/usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib' libtool: install: /bin/install -p .libs/libH5Part.so.0.0.0 /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5Part.so.0.0.0 libtool: install: (cd /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib && { ln -s -f libH5Part.so.0.0.0 libH5Part.so.0 || { rm -f libH5Part.so.0 && ln -s libH5Part.so.0.0.0 libH5Part.so.0; }; }) libtool: install: (cd /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib && { ln -s -f libH5Part.so.0.0.0 libH5Part.so || { rm -f libH5Part.so && ln -s libH5Part.so.0.0.0 libH5Part.so; }; }) libtool: install: /bin/install -p .libs/libH5Part.lai /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5Part.la libtool: install: /bin/install -p .libs/libH5PartF.so.0.0.0 /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5PartF.so.0.0.0 libtool: install: (cd /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib && { ln -s -f libH5PartF.so.0.0.0 libH5PartF.so.0 || { rm -f libH5PartF.so.0 && ln -s libH5PartF.so.0.0.0 libH5PartF.so.0; }; }) libtool: install: (cd /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib && { ln -s -f libH5PartF.so.0.0.0 libH5PartF.so || { rm -f libH5PartF.so && ln -s libH5PartF.so.0.0.0 libH5PartF.so; }; }) libtool: install: /bin/install -p .libs/libH5PartF.lai /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5PartF.la libtool: install: /bin/install -p .libs/libH5Part.a /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5Part.a libtool: install: chmod 644 /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5Part.a libtool: install: ranlib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5Part.a libtool: install: /bin/install -p .libs/libH5PartF.a /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5PartF.a libtool: install: chmod 644 /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5PartF.a libtool: install: ranlib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/lib/libH5PartF.a libtool: warning: remember to run 'libtool --finish /usr/lib/openmpi/lib' /bin/mkdir -p '/usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/include' /bin/install -p -m 644 H5Part.h H5PartTypes.h H5PartErrors.h H5PartAttrib.h H5Block.h H5BlockTypes.h H5BlockErrors.h H5BlockReadWrite.h H5MultiBlock.h H5MultiBlockTypes.h H5MultiBlockErrors.h H5MultiBlockReadWrite.h H5PartF.h Underscore.h '/usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/include' /bin/mkdir -p '/usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/include' /bin/install -p -m 644 H5PartF.h Underscore.h '/usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/include' make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' make[1]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/src' Making install in tools make[1]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' /bin/mkdir -p '/usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin' /bin/sh ../libtool --mode=install /bin/install -p h5pAttrib h5pToGNUplot homdynToH5p H5PartBench H5BlockBench '/usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin' libtool: warning: '../src/libH5Part.la' has not been installed in '/usr/lib/openmpi/lib' libtool: install: /bin/install -p .libs/h5pAttrib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/h5pAttrib libtool: warning: '../src/libH5Part.la' has not been installed in '/usr/lib/openmpi/lib' libtool: install: /bin/install -p .libs/h5pToGNUplot /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/h5pToGNUplot libtool: warning: '../src/libH5Part.la' has not been installed in '/usr/lib/openmpi/lib' libtool: install: /bin/install -p .libs/homdynToH5p /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/homdynToH5p libtool: warning: '../src/libH5Part.la' has not been installed in '/usr/lib/openmpi/lib' libtool: install: /bin/install -p .libs/H5PartBench /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/H5PartBench libtool: warning: '../src/libH5Part.la' has not been installed in '/usr/lib/openmpi/lib' libtool: install: /bin/install -p .libs/H5BlockBench /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/H5BlockBench make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[1]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6/tools' make[1]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6' make[2]: Entering directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6' make[1]: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6' make: Leaving directory '/usr/src/RPM/BUILD/h5part-mpi-1.6.6' + for i in /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/* + chrpath -r /usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/H5BlockBench /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/H5BlockBench: RPATH=/usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/H5BlockBench: new RPATH: /usr/lib/openmpi/lib + for i in /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/* + chrpath -r /usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/H5PartBench /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/H5PartBench: RPATH=/usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/H5PartBench: new RPATH: /usr/lib/openmpi/lib + for i in /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/* + chrpath -r /usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/h5pAttrib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/h5pAttrib: RPATH=/usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/h5pAttrib: new RPATH: /usr/lib/openmpi/lib + for i in /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/* + chrpath -r /usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/h5pToGNUplot /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/h5pToGNUplot: RPATH=/usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/h5pToGNUplot: new RPATH: /usr/lib/openmpi/lib + for i in /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/* + chrpath -r /usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/homdynToH5p /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/homdynToH5p: RPATH=/usr/lib/openmpi/lib /usr/src/tmp/h5part-mpi-buildroot/usr/lib/openmpi/bin/homdynToH5p: new RPATH: /usr/lib/openmpi/lib + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/h5part-mpi-buildroot (auto) mode of './usr/lib/openmpi/lib/libH5PartF.so.0.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib/openmpi/lib/libH5Part.so.0.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/h5part-mpi-buildroot (binconfig,pkgconfig,libtool,desktop) /usr/lib/openmpi/lib/libH5PartF.la: dependency_libs: ' -L/usr/lib/openmpi/lib -lhdf5 -lz -lm' --> '-L/usr/lib/openmpi/lib -lhdf5 -lz -lm' /usr/lib/openmpi/lib/libH5Part.la: dependency_libs: ' -L/usr/lib/openmpi/lib -lhdf5 -lz -lm' --> '-L/usr/lib/openmpi/lib -lhdf5 -lz -lm' Checking contents of files in /usr/src/tmp/h5part-mpi-buildroot/ (default) Compressing files in /usr/src/tmp/h5part-mpi-buildroot (auto) Adjusting library links in /usr/src/tmp/h5part-mpi-buildroot ./usr/lib: ./usr/lib/openmpi/lib: libH5Part.so.0 -> libH5Part.so.0.0.0 libH5PartF.so.0 -> libH5PartF.so.0.0.0 Verifying ELF objects in /usr/src/tmp/h5part-mpi-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) verify-elf: WARNING: ./usr/lib/openmpi/bin/H5BlockBench: RPATH entry found: /usr/lib/openmpi/lib verify-elf: WARNING: ./usr/lib/openmpi/bin/H5PartBench: RPATH entry found: /usr/lib/openmpi/lib verify-elf: WARNING: ./usr/lib/openmpi/bin/homdynToH5p: RPATH entry found: /usr/lib/openmpi/lib verify-elf: WARNING: ./usr/lib/openmpi/bin/h5pToGNUplot: RPATH entry found: /usr/lib/openmpi/lib verify-elf: WARNING: ./usr/lib/openmpi/bin/h5pToGNUplot: uses non-LFS functions: fopen verify-elf: WARNING: ./usr/lib/openmpi/bin/h5pAttrib: RPATH entry found: /usr/lib/openmpi/lib verify-elf: WARNING: ./usr/lib/openmpi/lib/libH5PartF.so.0.0.0: RPATH entry found: /usr/lib/openmpi/lib verify-elf: WARNING: ./usr/lib/openmpi/lib/libH5PartF.so.0.0.0: uses non-LFS functions: open verify-elf: WARNING: ./usr/lib/openmpi/lib/libH5Part.so.0.0.0: RPATH entry found: /usr/lib/openmpi/lib verify-elf: WARNING: ./usr/lib/openmpi/lib/libH5Part.so.0.0.0: uses non-LFS functions: open Hardlinking identical .pyc and .pyo files Processing files: h5part-mpi-1.6.6-alt5 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.58473 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd h5part-mpi-1.6.6 + DOCDIR=/usr/src/tmp/h5part-mpi-buildroot/usr/share/doc/h5part-mpi-1.6.6 + export DOCDIR + rm -rf /usr/src/tmp/h5part-mpi-buildroot/usr/share/doc/h5part-mpi-1.6.6 + /bin/mkdir -p /usr/src/tmp/h5part-mpi-buildroot/usr/share/doc/h5part-mpi-1.6.6 + cp -prL AUTHORS COPYING ChangeLog NEWS README /usr/src/tmp/h5part-mpi-buildroot/usr/share/doc/h5part-mpi-1.6.6 + chmod -R go-w /usr/src/tmp/h5part-mpi-buildroot/usr/share/doc/h5part-mpi-1.6.6 + chmod -R a+rX /usr/src/tmp/h5part-mpi-buildroot/usr/share/doc/h5part-mpi-1.6.6 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.gpNwJ5 find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.3zEom3 find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services) Requires: libh5part-mpi = 1.6.6-alt5, /lib/ld-linux.so.2, /usr/lib/openmpi/lib/libH5Part.so.0, /usr/lib/openmpi/lib/libhdf5.so.8, /usr/lib/openmpi/lib/libmpi.so.20, libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.3.4), libc.so.6(GLIBC_2.4), libgcc_s.so.1(GCC_3.0), libm.so.6(GLIBC_2.0), libm.so.6(GLIBC_2.29), libstdc++.so.6(CXXABI_1.3), libstdc++.so.6(GLIBCXX_3.4), libstdc++.so.6(GLIBCXX_3.4.11), libstdc++.so.6(GLIBCXX_3.4.21), libstdc++.so.6(GLIBCXX_3.4.9), rtld(GNU_HASH) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.WnKBj6 Creating h5part-mpi-debuginfo package Processing files: libh5part-mpi-1.6.6-alt5 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.4pknq3 find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Js6Uz7 find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services) Requires: /usr/lib/openmpi/lib/libhdf5.so.8, /usr/lib/openmpi/lib/libmpi.so.20, libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.3.4), libc.so.6(GLIBC_2.4), libm.so.6(GLIBC_2.0), libm.so.6(GLIBC_2.29), libpthread.so.0(GLIBC_2.0), rtld(GNU_HASH) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.KdSrF3 Creating libh5part-mpi-debuginfo package Processing files: libh5part-mpi-devel-1.6.6-alt5 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.vyWbN3 find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.pM1OE6 find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services) Requires: libh5part-mpi = 1.6.6-alt5, libhdf5-mpi-devel, /usr/lib/openmpi/lib/libH5Part.so.0.0.0, /usr/lib/openmpi/lib/libH5PartF.so.0.0.0 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Swtgk3 Processing files: h5part-mpi-debuginfo-1.6.6-alt5 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.PVDcD4 find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.9MyJS4 find-requires: running scripts (debuginfo) Requires: h5part-mpi = 1.6.6-alt5, /usr/lib/debug/lib/ld-linux.so.2.debug, /usr/lib/debug/usr/lib/openmpi/lib/libH5Part.so.0.debug, /usr/lib/debug/usr/lib/openmpi/lib/libhdf5.so.8.debug, /usr/lib/debug/usr/lib/openmpi/lib/libmpi.so.20.debug, debug(libc.so.6), debug(libgcc_s.so.1), debug(libm.so.6), debug(libstdc++.so.6) Processing files: libh5part-mpi-debuginfo-1.6.6-alt5 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.NPzLo6 find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.EZpTy6 find-requires: running scripts (debuginfo) Requires: libh5part-mpi = 1.6.6-alt5, /usr/lib/debug/usr/lib/openmpi/lib/libhdf5.so.8.debug, /usr/lib/debug/usr/lib/openmpi/lib/libmpi.so.20.debug, debug(libc.so.6), debug(libm.so.6), debug(libpthread.so.0) Adding to h5part-mpi-debuginfo a strict dependency on libh5part-mpi-debuginfo Removing from h5part-mpi-debuginfo 4 sources provided by libh5part-mpi-debuginfo also prunning dir /usr/src/debug/h5part-mpi-1.6.6/src Removing 1 extra deps from h5part-mpi due to dependency on libh5part-mpi Removing 2 extra deps from libh5part-mpi-devel due to dependency on libh5part-mpi Removing 1 extra deps from h5part-mpi-debuginfo due to dependency on libh5part-mpi-debuginfo Removing 9 extra deps from h5part-mpi due to repentancy on libh5part-mpi Removing 4 extra deps from h5part-mpi-debuginfo due to repentancy on libh5part-mpi-debuginfo warning: Installed (but unpackaged) file(s) found: /usr/lib/openmpi/lib/libH5Part.a /usr/lib/openmpi/lib/libH5Part.la /usr/lib/openmpi/lib/libH5PartF.a /usr/lib/openmpi/lib/libH5PartF.la Wrote: /usr/src/RPM/RPMS/i586/h5part-mpi-1.6.6-alt5.i586.rpm Wrote: /usr/src/RPM/RPMS/i586/libh5part-mpi-1.6.6-alt5.i586.rpm Wrote: /usr/src/RPM/RPMS/i586/libh5part-mpi-devel-1.6.6-alt5.i586.rpm Wrote: /usr/src/RPM/RPMS/i586/h5part-mpi-debuginfo-1.6.6-alt5.i586.rpm Wrote: /usr/src/RPM/RPMS/i586/libh5part-mpi-debuginfo-1.6.6-alt5.i586.rpm 31.42user 4.80system 1:02.92elapsed 57%CPU (0avgtext+0avgdata 56796maxresident)k 0inputs+0outputs (0major+1935751minor)pagefaults 0swaps 48.76user 8.72system 1:29.36elapsed 64%CPU (0avgtext+0avgdata 108528maxresident)k 16inputs+0outputs (0major+2507708minor)pagefaults 0swaps --- libh5part-mpi-1.6.6-alt5.i586.rpm.repo 2018-08-02 11:10:17.000000000 +0000 +++ libh5part-mpi-1.6.6-alt5.i586.rpm.hasher 2020-04-25 12:46:11.398522587 +0000 @@ -11,2 +11,3 @@ Requires: libm.so.6(GLIBC_2.0) +Requires: libm.so.6(GLIBC_2.29) Requires: libpthread.so.0(GLIBC_2.0)