<86>Nov 23 10:39:12 userdel[6767]: delete user 'rooter' <86>Nov 23 10:39:12 userdel[6767]: removed group 'rooter' owned by 'rooter' <86>Nov 23 10:39:12 userdel[6767]: removed shadow group 'rooter' owned by 'rooter' <86>Nov 23 10:39:12 groupadd[6794]: group added to /etc/group: name=rooter, GID=549 <86>Nov 23 10:39:12 groupadd[6794]: group added to /etc/gshadow: name=rooter <86>Nov 23 10:39:12 groupadd[6794]: new group: name=rooter, GID=549 <86>Nov 23 10:39:12 useradd[6814]: new user: name=rooter, UID=549, GID=549, home=/root, shell=/bin/bash <86>Nov 23 10:39:12 userdel[6864]: delete user 'builder' <86>Nov 23 10:39:12 userdel[6864]: removed group 'builder' owned by 'builder' <86>Nov 23 10:39:12 userdel[6864]: removed shadow group 'builder' owned by 'builder' <86>Nov 23 10:39:12 groupadd[6887]: group added to /etc/group: name=builder, GID=550 <86>Nov 23 10:39:12 groupadd[6887]: group added to /etc/gshadow: name=builder <86>Nov 23 10:39:12 groupadd[6887]: new group: name=builder, GID=550 <86>Nov 23 10:39:12 useradd[6912]: new user: name=builder, UID=550, GID=550, home=/usr/src, shell=/bin/bash <13>Nov 23 10:39:17 rpmi: libgdbm-1.8.3-alt10 1454943334 installed <13>Nov 23 10:39:17 rpmi: libexpat-2.2.4-alt1 1503305345 installed <13>Nov 23 10:39:17 rpmi: libp11-kit-0.23.15-alt1 sisyphus+226408.100.2.1 1554288204 installed <13>Nov 23 10:39:17 rpmi: libtasn1-4.14-alt1 sisyphus+235791.100.1.1 1565282372 installed <13>Nov 23 10:39:17 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Nov 23 10:39:17 rpmi: alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Nov 23 10:39:17 rpmi: ca-certificates-2019.10.28-alt1 sisyphus+239875.300.1.1 1572267834 installed <13>Nov 23 10:39:17 rpmi: ca-trust-0.1.2-alt1 sisyphus+233348.100.1.1 1561653823 installed <13>Nov 23 10:39:17 rpmi: p11-kit-trust-0.23.15-alt1 sisyphus+226408.100.2.1 1554288204 installed <13>Nov 23 10:39:17 rpmi: libcrypto1.1-1.1.1d-alt1.1 sisyphus+237931.100.2.1 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10:39:25 rpmi: libwayland-client-1.17.0-alt1 sisyphus+225894.100.1.1 1553872805 installed <13>Nov 23 10:39:25 rpmi: perl-HTTP-Date-6.04-alt1 sisyphus+241046.100.1.1 1574192946 installed <13>Nov 23 10:39:25 rpmi: libpng16-1.6.37-alt1 sisyphus+236677.100.2.1 1566917998 installed <13>Nov 23 10:39:25 rpmi: python3-module-attrs-19.3.0-alt1 sisyphus+240796.100.1.1 1573741715 installed <13>Nov 23 10:39:25 rpmi: libtcl-8.6.10-alt1 sisyphus+241485.100.1.1 1574408316 installed <13>Nov 23 10:39:25 rpmi: perl-XML-NamespaceSupport-1.12-alt1 1491296348 installed <13>Nov 23 10:39:25 rpmi: libjpeg-2:2.0.2-alt1 sisyphus+226996.100.1.1 1554902907 installed <13>Nov 23 10:39:25 rpmi: python3-module-ntlm-1.1.0-alt1.2 sisyphus+228512.100.1.1 1556654575 installed <13>Nov 23 10:39:25 rpmi: python3-module-nose-1:1.3.7-alt4.git20160316 sisyphus+229068.100.1.1 1557255939 installed <13>Nov 23 10:39:25 rpmi: python3-module-pyparsing-2.4.2-alt1 sisyphus+236061.100.3.1 1565853577 installed <13>Nov 23 10:39:25 rpmi: 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1560100609 installed <13>Nov 23 10:39:26 rpmi: python3-module-hpack-3.0.0-alt1.qa1 sisyphus+227493.500.1.3 1555835217 installed <13>Nov 23 10:39:26 rpmi: python3-module-h2-3.0.1-alt3 sisyphus+235493.2200.6.1 1565442274 installed <13>Nov 23 10:39:26 rpmi: python3-module-z3c-3.0.0-alt3 sisyphus+220440.100.1.1 1549119447 installed <13>Nov 23 10:39:26 rpmi: python3-module-zc-1.0.0-alt6.2 1458024175 installed <13>Nov 23 10:39:26 rpmi: python3-module-zope-3.3.0-alt8.5 sisyphus+225625.33400.91.1 1555314837 installed <13>Nov 23 10:39:27 rpmi: python3-module-serial-3.4-alt1 1508504506 installed <13>Nov 23 10:39:27 rpmi: python3-module-pygobject-2.28.6-alt10.1.1.1 sisyphus+225625.41000.91.1 1555331367 installed <13>Nov 23 10:39:27 rpmi: python3-module-atomicwrites-1.3.0-alt2 sisyphus+235493.500.3.1 1565370463 installed <13>Nov 23 10:39:27 rpmi: python3-module-appdirs-1.4.3-alt1.1 sisyphus+227473.200.1.2 1555755564 installed <13>Nov 23 10:39:27 rpmi: python3-module-apipkg-1.5-alt1 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python3-module-chardet-3.0.4-alt1 sisyphus+227476.1700.1.2 1555756717 installed <13>Nov 23 10:39:28 rpmi: python3-module-webencodings-0.5.1-alt1.1 1517943573 installed <13>Nov 23 10:39:28 rpmi: python3-module-pycparser-2.19-alt1 sisyphus+228366.1000.2.3 1556706938 installed <13>Nov 23 10:39:28 rpmi: python3-module-cffi-1.13.2-alt1 sisyphus+240882.100.2.1 1573892898 installed <13>Nov 23 10:39:28 rpmi: python3-module-cryptography-2.8-alt1 sisyphus+239390.100.1.2 1571349426 installed <13>Nov 23 10:39:28 rpmi: python3-module-OpenSSL-19.0.0-alt1 sisyphus+238757.100.1.1 1570339901 installed <13>Nov 23 10:39:28 rpmi: python3-module-ndg-httpsclient-0.4.2-alt1.qa1 sisyphus+227504.1300.1.2 1555853234 installed <13>Nov 23 10:39:28 rpmi: python3-module-urllib3-2:1.25.6-alt1 sisyphus+238720.100.2.1 1570349439 installed <13>Nov 23 10:39:28 rpmi: python3-module-requests-2.22.0-alt1 sisyphus+238756.100.1.1 1570338316 installed <13>Nov 23 10:39:28 rpmi: python-sphinx-objects.inv-1:2.3.9.20191106-alt1 sisyphus+240380.100.1.1 1573102387 installed <13>Nov 23 10:39:28 rpmi: libnumpy-py3-1:1.15.4-alt3 sisyphus+237451.600.2.1 1568392195 installed <13>Nov 23 10:39:28 rpmi: libnumpy-1:1.15.4-alt3 sisyphus+237451.600.2.1 1568392195 installed <13>Nov 23 10:39:28 rpmi: libtinfo-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686226 installed <13>Nov 23 10:39:28 rpmi: libncurses-devel-6.1.20180407-alt2 sisyphus+222164.200.1.1 1550686226 installed <13>Nov 23 10:39:28 rpmi: python3-dev-3.7.4-alt2 sisyphus+239418.100.1.1 1571389913 installed <13>Nov 23 10:39:28 rpmi: python3-module-setuptools-1:41.4.0-alt1 sisyphus+238787.100.2.1 1570608044 installed <13>Nov 23 10:39:28 rpmi: python3-module-twisted-runner-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:28 rpmi: python3-module-twisted-logger-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:28 rpmi: python3-module-twisted-web-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:29 rpmi: python3-module-twisted-conch-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:29 rpmi: python3-module-twisted-names-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:29 rpmi: python3-module-twisted-pair-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:29 rpmi: python3-module-twisted-positioning-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:29 rpmi: python3-module-twisted-core-test-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:29 rpmi: python3-module-twisted-words-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:29 rpmi: python3-module-automat-0.7.0-alt1 sisyphus+233511.100.1.1 1561912741 installed <13>Nov 23 10:39:29 rpmi: python3-module-twisted-core-18.9.0-alt1 sisyphus+225625.46000.91.1 1555354932 installed <13>Nov 23 10:39:30 rpmi: python3-module-tornado-5.1.1-alt2 sisyphus+225625.16600.91.1 1555292790 installed <13>Nov 23 10:39:30 rpmi: libxblas-1.0.248-alt1.3 sisyphus+229150.100.1.1 1557388786 installed <13>Nov 23 10:39:30 rpmi: libxkbcommon-0.9.1-alt1 sisyphus+239553.100.1.1 1571659627 installed <13>Nov 23 10:39:30 rpmi: publicsuffix-list-dafsa-20191108-alt1 sisyphus+240482.100.1.2 1573431390 installed <13>Nov 23 10:39:30 rpmi: libpsl-0.21.0-alt2 sisyphus+237083.100.1.1 1567531657 installed <13>Nov 23 10:39:30 rpmi: libverto-0.3.0-alt1_7 sisyphus+225932.100.1.1 1553994919 installed <13>Nov 23 10:39:30 rpmi: libkeyutils-1.6-alt2 sisyphus+226520.100.2.1 1554512089 installed <13>Nov 23 10:39:30 rpmi: libgudev-1:233-alt1 sisyphus+235422.100.1.1 1564855273 installed <13>Nov 23 10:39:30 rpmi: udev-rules-1:243-alt4 sisyphus+240263.100.1.1 1573004022 installed <13>Nov 23 10:39:30 rpmi: libquadmath0-9.2.1-alt2 sisyphus+240563.200.2.1 1573479396 installed <13>Nov 23 10:39:30 rpmi: libgfortran5-9.2.1-alt2 sisyphus+240563.200.2.1 1573479396 installed 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<13>Nov 23 10:39:35 rpmi: libdbus-1.12.16-alt2 sisyphus+240566.100.2.1 1573547696 installed <13>Nov 23 10:39:35 rpmi: dbus-tools-1.12.16-alt2 sisyphus+240566.100.2.1 1573547696 installed <86>Nov 23 10:39:35 groupadd[29896]: group added to /etc/group: name=messagebus, GID=498 <86>Nov 23 10:39:35 groupadd[29896]: group added to /etc/gshadow: name=messagebus <86>Nov 23 10:39:35 groupadd[29896]: new group: name=messagebus, GID=498 <86>Nov 23 10:39:35 useradd[29908]: new user: name=messagebus, UID=499, GID=498, home=/run/dbus, shell=/dev/null <13>Nov 23 10:39:35 rpmi: dbus-1.12.16-alt2 sisyphus+240566.100.2.1 1573547696 installed <13>Nov 23 10:39:35 rpmi: dconf-0.34.0-alt1 sisyphus+237956.1500.4.2 1569334549 installed <13>Nov 23 10:39:35 rpmi: libgtk+3-schemas-3.24.12-alt1 sisyphus+238952.400.5.1 1570658028 installed <13>Nov 23 10:39:35 rpmi: libavahi-0.7-alt1 sisyphus+237493.100.1.1 1568299481 installed <13>Nov 23 10:39:35 rpmi: libcups-2.2.12-alt3 sisyphus+240570.100.1.1 1573481639 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python3-module-matplotlib-2.2.3-alt4 sisyphus+238457.300.3.1 1569956199 installed <13>Nov 23 10:39:40 rpmi: python3-module-matplotlib-gtk3-2.2.3-alt4 sisyphus+238457.300.3.1 1569956199 installed <13>Nov 23 10:39:41 rpmi: python3-module-scipy-1.2.0-alt5 sisyphus+238545.300.4.1 1570108415 installed <13>Nov 23 10:39:41 rpmi: python3-module-scikit-learn-tests-0.19.1-alt2.1 sisyphus+225625.53100.91.1 1555370263 installed <13>Nov 23 10:39:42 rpmi: python3-module-scikit-learn-0.19.1-alt2.1 sisyphus+225625.53100.91.1 1555370263 installed <13>Nov 23 10:39:42 rpmi: python3-module-pbr-5.4.3-alt1 sisyphus+237524.100.1.1 1568395052 installed <13>Nov 23 10:39:42 rpmi: python-tools-2to3-2.7.17-alt3 sisyphus+240580.200.5.1 1573517321 installed <13>Nov 23 10:39:42 rpmi: python3-module-unittest2-1.1.0-alt3 sisyphus+227535.1100.2.1 1556009290 installed <13>Nov 23 10:39:42 rpmi: python3-module-tabulate-0.7.3-alt2 sisyphus+227531.1600.1.2 1555925404 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/python3-module-ccsnmultivar-0.0.5-alt2.nosrc.rpm Installing python3-module-ccsnmultivar-0.0.5-alt2.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.28100 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf python3-module-ccsnmultivar-0.0.5 + echo 'Source #0 (python3-module-ccsnmultivar-0.0.5.tar):' Source #0 (python3-module-ccsnmultivar-0.0.5.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/python3-module-ccsnmultivar-0.0.5.tar + cd python3-module-ccsnmultivar-0.0.5 + /bin/chmod -c -Rf u+rwX,go-w . + find ./ -type f -name '*.py' -exec 2to3 -w -n '{}' + RefactoringTool: Skipping optional fixer: buffer RefactoringTool: Skipping optional fixer: idioms RefactoringTool: Skipping optional fixer: set_literal RefactoringTool: Skipping optional fixer: ws_comma RefactoringTool: No changes to ./setup.py RefactoringTool: Refactored ./docs/conf.py RefactoringTool: Refactored ./ccsnmultivar/multivar.py --- ./docs/conf.py (original) +++ ./docs/conf.py (refactored) @@ -63,8 +63,8 @@ master_doc = 'README.md' # General information about the project. -project = u'ccsnmultivar' -copyright = u'2014, Bill Engels' +project = 'ccsnmultivar' +copyright = '2014, Bill Engels' # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the @@ -216,8 +216,8 @@ # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ - ('index', 'ccsnmultivar.tex', u'ccsnmultivar Documentation', - u'Bill Engels', 'manual'), + ('index', 'ccsnmultivar.tex', 'ccsnmultivar Documentation', + 'Bill Engels', 'manual'), ] # The name of an image file (relative to this directory) to place at the top of @@ -246,8 +246,8 @@ # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ - ('index', 'ccsnmultivar', u'ccsnmultivar Documentation', - [u'Bill Engels'], 1) + ('index', 'ccsnmultivar', 'ccsnmultivar Documentation', + ['Bill Engels'], 1) ] # If true, show URL addresses after external links. @@ -260,8 +260,8 @@ # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ - ('index', 'ccsnmultivar', u'ccsnmultivar Documentation', - u'Bill Engels', 'ccsnmultivar', 'One line description of project.', + ('index', 'ccsnmultivar', 'ccsnmultivar Documentation', + 'Bill Engels', 'ccsnmultivar', 'One line description of project.', 'Miscellaneous'), ] --- ./ccsnmultivar/multivar.py (original) +++ ./ccsnmultivar/multivar.py (refactored) @@ -4,7 +4,7 @@ import re as re import csv as csv from tabulate import tabulate -import GWUtils +from . import GWUtils class Multivar(object): @@ -55,12 +55,12 @@ row_names = self._designmatrix_object.get_rownames() # make sure waveforms are matched # loop through Xrow_names, use as key for Y_dict, populate Y_matrix - Y = np.empty((len(row_names),len(Y_dict[Y_dict.keys()[0]]))) + Y = np.empty((len(row_names),len(Y_dict[list(Y_dict.keys())[0]]))) # check if waveforms are complex valued. if so, instantiate Y as complex type - if sum(np.iscomplex(Y_dict[Y_dict.keys()[0]])): + if sum(np.iscomplex(Y_dict[list(Y_dict.keys())[0]])): # then it is complex - Y = np.empty((len(row_names),len(Y_dict[Y_dict.keys()[0]]))).astype(np.complex) + Y = np.empty((len(row_names),len(Y_dict[list(Y_dict.keys())[0]]))).astype(np.complex) for i in np.arange(0,len(row_names)): Y[i,:] = Y_dict[row_names[i]] @@ -206,18 +206,18 @@ raise ValueError("degrees of freedom <= 0, Hotellings T2 not defined") # print catalog and basis info - cat_table = self._catalog_object.get_params().items() - bas_table = self._basis_object.get_params().items() - print tabulate(cat_table+bas_table,tablefmt='plain') + cat_table = list(self._catalog_object.get_params().items()) + bas_table = list(self._basis_object.get_params().items()) + print(tabulate(cat_table+bas_table,tablefmt='plain')) # then print pvalues # make T^2 & pvalue table headers = self._results[0] table = self._results[1:] - print tabulate(table, headers, tablefmt="rst") - print "Formula Used: %s" % self._designmatrix_object._formula - print "Degrees of Freedom (n - p - k): %s" % str(total_dof) - print "Condition Number of X^T*X: %.2f" % np.linalg.cond(np.dot(self._X.T, self._X)) + print(tabulate(table, headers, tablefmt="rst")) + print("Formula Used: %s" % self._designmatrix_object._formula) + print("Degrees of Freedom (n - p - k): %s" % str(total_dof)) + print("Condition Number of X^T*X: %.2f" % np.linalg.cond(np.dot(self._X.T, selfRefactoringTool: Refactored ./ccsnmultivar/designmatrix.py RefactoringTool: Refactored ./ccsnmultivar/catalog.py ._X))) def reconstruct(self): """ return reconstructed waveforms fit by the multivar object""" @@ -240,7 +240,7 @@ ["Max: ",np.max(olaps)]] header = ["Percentile","Overlap"] - print tabulate(table,header,tablefmt="rst") + print(tabulate(table,header,tablefmt="rst")) def compute_overlaps(self, *args): """ compute overlaps """ --- ./ccsnmultivar/designmatrix.py (original) +++ ./ccsnmultivar/designmatrix.py (refactored) @@ -15,7 +15,7 @@ def get_metadata(self): # return column names, row names, formula - print "not done yet" + print("not done yet") def get_rownames(self): return self._row_names @@ -133,7 +133,7 @@ # store dictionary of encoder functions to keep for prediction encoder_dict[key] = polynomial_encoder else: - print encoding + print(encoding) raise Exception("Encoding name error") # now compute interaction designmatrices for interaction in inter_list: @@ -224,7 +224,7 @@ # now do interactions inter_list = self._inter_list for interaction in inter_list: - if 'twoway' in encoder_dict.keys(): + if 'twoway' in list(encoder_dict.keys()): encoder = encoder_dict['twoway'] param_name1 = interaction[0] param_name2 = interaction[1] @@ -237,7 +237,7 @@ for i in np.arange(0,len(names)): Xbycol_dict[names[i]] = X_int[:,i] - if 'threeway' in encoder_dict.keys(): + if 'threeway' in list(encoder_dict.keys()): encoder = encoder_dict['threeway'] param_name1 = interaction[0] param_name2 = interaction[1] @@ -254,7 +254,7 @@ # remove columns that were trimmed (if any) trimmed_columns = encoder_dict['trimmed_columns'] - full_columns = Xbycol_dict.keys() + full_columns = list(Xbycol_dict.keys()) used_columns = [x for x in full_columns if x not in trimmed_columns] # make design matrix array X = [] @@ -442,7 +442,7 @@ def _poly_encode(param_dict,degree,param_name): - x = np.array(map(float,param_dict[param_name])) + x = np.array(list(map(float,param_dict[param_name]))) degree = int(degree) if len(np.unique(x)) < 5: warning.warn("Not many unique values of parameter %s for Poly encoding" & param_name) @@ -454,7 +454,7 @@ def polynomial_encoder(param_name, new_values): # generate chebyshev polynomials x = new_values - x = np.array(map(float, x)) + x = np.array(list(map(float, x))) # check if new_values are outside the range of the originals if (max(x) > max_x) or (min(x) < min_x): raise ValueError("Cannot extrapolate outside original parameter range") @@ -480,4 +480,4 @@ return polynomial_encoder, X, col_names def _bs_encode(param_dict,bsplineparameters, param_name): - print "not implemented yet" + print("not implemented yet") --- ./ccsnmultivar/catalog.py (original) +++ ./ccsnmultivar/catalog.py (refactored) @@ -75,7 +75,7 @@ freq_bin_lower = 40 fs = self._metadata['fs'] Y_transformed = {} - for key in self.Y_dict.keys(): + for key in list(self.Y_dict.keys()): # normalize by fs, bins have units strain/Hz fs = self._metadata["fs"] Y_transformed[key] = (1./fs)*np.fft.fft(self.Y_dict[key])[freq_bin_lower:freq_bin_upper] @@ -89,13 +89,13 @@ self.sigma = convert_psd_to_sigma(self.psd, dF) def _spectogram(self): - print "not implemented yet" + print("not implemented yet") def _amplitude(self): - print "not implemented yet" + print("not implemented yet") def _phase(self): - print "not implemented yet" + print("not implemented yet") def mcmc_hook(self): dF = RefactoringTool: No changes to ./ccsnmultivar/basis.py RefactoringTool: No changes to ./ccsnmultivar/__init__.py RefactoringTool: No changes to ./ccsnmultivar/GWUtils.py RefactoringTool: Files that were modified: RefactoringTool: ./setup.py RefactoringTool: ./docs/conf.py RefactoringTool: ./ccsnmultivar/multivar.py RefactoringTool: ./ccsnmultivar/designmatrix.py RefactoringTool: ./ccsnmultivar/catalog.py RefactoringTool: ./ccsnmultivar/basis.py RefactoringTool: ./ccsnmultivar/__init__.py RefactoringTool: ./ccsnmultivar/GWUtils.py self._metadata["dF"] @@ -141,7 +141,7 @@ """ # right now, Y_dict, using my ccsnmultivar github waveform sets - for key in Y_dict.keys(): + for key in list(Y_dict.keys()): Y_dict[key] = signal.decimate(Y_dict[key], 4, ftype='fir') metadata = {} metadata["fs"] = 4096. # in Hz @@ -168,7 +168,7 @@ wave_list = [x for x in wave_list if x != []] Y_dict = {} for i in np.arange(0,len(wave_list)): - Y_dict[wave_list[i][0]] = map(np.float, wave_list[i][1:]) + Y_dict[wave_list[i][0]] = list(map(np.float, wave_list[i][1:])) return Y_dict ++ find ./ -name '*.py' + sed -i 's|#!/usr/bin/python|#!/usr/bin/python3|' ./setup.py ./docs/conf.py ./ccsnmultivar/multivar.py ./ccsnmultivar/designmatrix.py ./ccsnmultivar/catalog.py ./ccsnmultivar/basis.py ./ccsnmultivar/__init__.py ./ccsnmultivar/GWUtils.py + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.26504 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python3-module-ccsnmultivar-0.0.5 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export FFLAGS + /usr/bin/python3 setup.py build --debug running build running build_py creating build creating build/lib creating build/lib/ccsnmultivar copying ccsnmultivar/GWUtils.py -> build/lib/ccsnmultivar copying ccsnmultivar/__init__.py -> build/lib/ccsnmultivar copying ccsnmultivar/basis.py -> build/lib/ccsnmultivar copying ccsnmultivar/catalog.py -> build/lib/ccsnmultivar copying ccsnmultivar/designmatrix.py -> build/lib/ccsnmultivar copying ccsnmultivar/multivar.py -> build/lib/ccsnmultivar /usr/lib/python3/site-packages/sklearn/utils/__init__.py:4: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Sequence /usr/lib/python3/site-packages/sklearn/model_selection/_split.py:18: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Iterable /usr/lib/python3/site-packages/sklearn/model_selection/_search.py:16: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Mapping, namedtuple, defaultdict, Sequence + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.24357 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/python3-module-ccsnmultivar-buildroot + : + /bin/rm -rf -- /usr/src/tmp/python3-module-ccsnmultivar-buildroot + cd python3-module-ccsnmultivar-0.0.5 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export FFLAGS + /usr/bin/python3 setup.py install --skip-build --root=/usr/src/tmp/python3-module-ccsnmultivar-buildroot --force running install running install_lib creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3 creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages creating /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/multivar.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/designmatrix.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/catalog.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/basis.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/__init__.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar copying build/lib/ccsnmultivar/GWUtils.py -> /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py to multivar.cpython-37.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py to designmatrix.cpython-37.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/catalog.py to catalog.cpython-37.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/basis.py to basis.cpython-37.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__init__.py to __init__.cpython-37.pyc byte-compiling /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py to GWUtils.cpython-37.pyc running install_egg_info running egg_info creating ccsnmultivar.egg-info writing ccsnmultivar.egg-info/PKG-INFO writing dependency_links to ccsnmultivar.egg-info/dependency_links.txt writing requirements to ccsnmultivar.egg-info/requires.txt writing top-level names to ccsnmultivar.egg-info/top_level.txt writing manifest file 'ccsnmultivar.egg-info/SOURCES.txt' reading manifest file 'ccsnmultivar.egg-info/SOURCES.txt' writing manifest file 'ccsnmultivar.egg-info/SOURCES.txt' Copying ccsnmultivar.egg-info to /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar-0.0.5-py3.7.egg-info running install_scripts /usr/lib/python3/site-packages/sklearn/utils/__init__.py:4: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Sequence /usr/lib/python3/site-packages/sklearn/model_selection/_split.py:18: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Iterable /usr/lib/python3/site-packages/sklearn/model_selection/_search.py:16: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Mapping, namedtuple, defaultdict, Sequence + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/python3-module-ccsnmultivar-buildroot (auto) Verifying and fixing files in /usr/src/tmp/python3-module-ccsnmultivar-buildroot (binconfig,pkgconfig,libtool,desktop) Checking contents of files in /usr/src/tmp/python3-module-ccsnmultivar-buildroot/ (default) Compressing files in /usr/src/tmp/python3-module-ccsnmultivar-buildroot (auto) Adjusting library links in /usr/src/tmp/python3-module-ccsnmultivar-buildroot ./usr/lib: Verifying ELF objects in /usr/src/tmp/python3-module-ccsnmultivar-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Bytecompiling python modules in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python2.7 Bytecompiling python modules with optimization in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python2.7 -O Bytecompiling python3 modules in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python3 unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-37.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-37.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-37.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-37.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-37.pyc unlink /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-37.pyc compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__init__.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/basis.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/catalog.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py Bytecompiling python3 modules with optimization in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python3 -O compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__init__.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/basis.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/catalog.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py Bytecompiling python3 modules with optimization-2 in /usr/src/tmp/python3-module-ccsnmultivar-buildroot using /usr/bin/python3 -OO compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/__init__.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/basis.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/catalog.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py compile /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py Hardlinking identical .pyc and .opt-?.pyc files './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-37.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/multivar.cpython-37.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-37.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/designmatrix.cpython-37.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-37.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/catalog.cpython-37.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-37.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/basis.cpython-37.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-37.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-37.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-37.opt-2.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/__init__.cpython-37.opt-1.pyc' './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-37.opt-1.pyc' => './usr/lib/python3/site-packages/ccsnmultivar/__pycache__/GWUtils.cpython-37.pyc' Hardlinking identical .pyc and .pyo files Executing(%check): /bin/sh -e /usr/src/tmp/rpm-tmp.50024 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python3-module-ccsnmultivar-0.0.5 + python3 setup.py test running test running egg_info writing ccsnmultivar.egg-info/PKG-INFO writing dependency_links to ccsnmultivar.egg-info/dependency_links.txt deleting ccsnmultivar.egg-info/requires.txt writing top-level names to ccsnmultivar.egg-info/top_level.txt reading manifest file 'ccsnmultivar.egg-info/SOURCES.txt' writing manifest file 'ccsnmultivar.egg-info/SOURCES.txt' running build_ext /usr/lib/python3/site-packages/sklearn/utils/__init__.py:4: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Sequence /usr/lib/python3/site-packages/sklearn/model_selection/_split.py:18: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Iterable /usr/lib/python3/site-packages/sklearn/model_selection/_search.py:16: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Mapping, namedtuple, defaultdict, Sequence ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK + exit 0 Processing files: python3-module-ccsnmultivar-0.0.5-alt2 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.54850 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python3-module-ccsnmultivar-0.0.5 + DOCDIR=/usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + export DOCDIR + rm -rf /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + /bin/mkdir -p /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + cp -prL AUTHORS README.md docs/index.rst Example_Catalogs /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + chmod -R go-w /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + chmod -R a+rX /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/share/doc/python3-module-ccsnmultivar-0.0.5 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.PQpzkx find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.gYM6pv find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks) python3.req: /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py: skipping sys python3.req: /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/designmatrix.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/multivar.py: line=7 possible relative import from ., UNIMPLEMENTED shebang.req.files: executable script /usr/src/tmp/python3-module-ccsnmultivar-buildroot/usr/lib/python3/site-packages/ccsnmultivar/GWUtils.py is not executable Provides: python3(ccsnmultivar), python3(ccsnmultivar.GWUtils), python3(ccsnmultivar.basis), python3(ccsnmultivar.catalog), python3(ccsnmultivar.designmatrix), python3(ccsnmultivar.multivar) Requires: python3(numpy) < 0, python3(scipy) < 0, python3(tabulate) < 0, python3(sklearn) < 0, /usr/lib/python3/site-packages, python3(csv) < 0, python3(re) < 0, python3(scipy.stats) < 0, python3(sklearn.decomposition) < 0, python3(warnings) < 0 Wrote: /usr/src/RPM/RPMS/noarch/python3-module-ccsnmultivar-0.0.5-alt2.noarch.rpm 18.98user 1.44system 0:25.74elapsed 79%CPU (0avgtext+0avgdata 59164maxresident)k 0inputs+0outputs (0major+190844minor)pagefaults 0swaps 47.50user 11.54system 1:08.17elapsed 86%CPU (0avgtext+0avgdata 109960maxresident)k 8568inputs+0outputs (0major+740779minor)pagefaults 0swaps