<86>Nov 14 06:42:41 userdel[53103]: delete user 'rooter' <86>Nov 14 06:42:41 groupadd[53147]: group added to /etc/group: name=rooter, GID=540 <86>Nov 14 06:42:41 groupadd[53147]: new group: name=rooter, GID=540 <86>Nov 14 06:42:41 useradd[53165]: new user: name=rooter, UID=540, GID=540, home=/root, shell=/bin/bash <86>Nov 14 06:42:41 userdel[53188]: delete user 'builder' <86>Nov 14 06:42:41 userdel[53188]: removed group 'builder' owned by 'builder' <86>Nov 14 06:42:41 userdel[53188]: removed shadow group 'builder' owned by 'builder' <86>Nov 14 06:42:41 groupadd[53464]: group added to /etc/group: name=builder, GID=541 <86>Nov 14 06:42:41 groupadd[53464]: group added to /etc/gshadow: name=builder <86>Nov 14 06:42:41 groupadd[53464]: new group: name=builder, GID=541 <86>Nov 14 06:42:41 useradd[53480]: new user: name=builder, UID=541, GID=541, home=/usr/src, shell=/bin/bash warning: user glebfm does not exist - using root warning: group glebfm does not exist - using root warning: user glebfm does not exist - using root warning: group glebfm does not exist - using root warning: user glebfm does not exist - using root warning: group glebfm does not exist - using root warning: user glebfm does not exist - using root warning: group glebfm does not exist - using root <13>Nov 14 06:42:46 rpmi: libglvnd-7:1.1.0-alt3 sisyphus.215982.100 1541498632 installed <13>Nov 14 06:42:46 rpmi: libexpat-2.2.4-alt1 1503305345 installed <13>Nov 14 06:42:46 rpmi: xorg-proto-devel-2018.4-alt3 1527685079 installed <13>Nov 14 06:42:46 rpmi: libwayland-server-1.16.0-alt1 1535614871 installed <13>Nov 14 06:42:46 rpmi: libOpenGL-7:1.1.0-alt3 sisyphus.215982.100 1541498632 installed <13>Nov 14 06:42:46 rpmi: libGLES-7:1.1.0-alt3 sisyphus.215982.100 1541498632 installed <13>Nov 14 06:42:46 rpmi: libtinfo-devel-6.1.20180407-alt2 sisyphus.215627.200 1540831974 installed <13>Nov 14 06:42:46 rpmi: libncurses-devel-6.1.20180407-alt2 sisyphus.215627.200 1540831974 installed <13>Nov 14 06:42:46 rpmi: libgdbm-1.8.3-alt10 1454943334 installed <13>Nov 14 06:42:46 rpmi: libpng15-1.5.28-alt2 1497966749 installed <13>Nov 14 06:42:46 rpmi: libjpeg-2:1.5.1-alt1 1498218318 installed <13>Nov 14 06:42:46 rpmi: libpng16-1.6.35-alt1 sisyphus.214397.100 1539159349 installed <13>Nov 14 06:42:46 rpmi: libgraphite2-1.3.12-alt2.1 sisyphus.215942.100 1540990757 installed <13>Nov 14 06:42:47 rpmi: libharfbuzz-2.0.2-alt1 sisyphus.215425.100 1540400162 installed <13>Nov 14 06:42:47 rpmi: libfreetype-2.9.1-alt1.S1 1530781053 installed <13>Nov 14 06:42:47 rpmi: fontconfig-2.13.1-alt1 sisyphus.215917.100 1540973886 installed Updating fonts cache: <29>Nov 14 06:42:48 fontconfig: Updating fonts cache: succeeded [ DONE ] <13>Nov 14 06:42:48 rpmi: libxshmfence-1.2-alt2 1518613552 installed <13>Nov 14 06:42:48 rpmi: libX11-locales-3:1.6.7-alt1 sisyphus.214413.200 1539171080 installed <13>Nov 14 06:42:48 rpmi: libXdmcp-1.1.1-alt1 1334617701 installed <13>Nov 14 06:42:48 rpmi: libXau-1.0.8-alt1 1369565808 installed <13>Nov 14 06:42:48 rpmi: libxcb-1.13.1-alt1 sisyphus.214413.100 1539170896 installed <13>Nov 14 06:42:48 rpmi: libX11-3:1.6.7-alt1 sisyphus.214413.200 1539171143 installed <13>Nov 14 06:42:48 rpmi: libXext-1.3.3-alt1 1409902959 installed <13>Nov 14 06:42:48 rpmi: libXfixes-5.0.3-alt1 sisyphus.216396.300 1542022162 installed <13>Nov 14 06:42:48 rpmi: libXrender-0.9.8-alt1 1371312112 installed <13>Nov 14 06:42:48 rpmi: libXcursor-1.1.15-alt1.S1 1512373366 installed <13>Nov 14 06:42:48 rpmi: libXft-2.3.2-alt1 1409902660 installed <13>Nov 14 06:42:48 rpmi: libXxf86vm-1.1.4-alt2 1527672187 installed <13>Nov 14 06:42:49 rpmi: libXinerama-1.1.3-alt2 1527671619 installed <13>Nov 14 06:42:49 rpmi: libXdamage-1.1.3-alt4 1297162593 installed <13>Nov 14 06:42:51 rpmi: libxcb-devel-1.13.1-alt1 sisyphus.214413.100 1539170896 installed <13>Nov 14 06:42:51 rpmi: libX11-devel-3:1.6.7-alt1 sisyphus.214413.200 1539171143 installed <13>Nov 14 06:42:51 rpmi: libwayland-client-1.16.0-alt1 1535614871 installed <13>Nov 14 06:42:51 rpmi: libpciaccess-1:0.14-alt1 1528969252 installed <13>Nov 14 06:42:51 rpmi: libdrm-1:2.4.96-alt1 sisyphus.215486.100 1540374027 installed <13>Nov 14 06:42:51 rpmi: libGLX-mesa-4:18.2.4-alt1 sisyphus.215982.200 1541499328 installed <13>Nov 14 06:42:51 rpmi: libGLX-7:1.1.0-alt3 sisyphus.215982.100 1541498632 installed <13>Nov 14 06:42:51 rpmi: libGL-7:1.1.0-alt3 sisyphus.215982.100 1541498632 installed <13>Nov 14 06:42:51 rpmi: libGLU-4:9.0.0-alt1 1347643784 installed <13>Nov 14 06:42:51 rpmi: libfltk13-1.3.3-alt2 1487804054 installed <13>Nov 14 06:42:51 rpmi: libgbm-4:18.2.4-alt1 sisyphus.215982.200 1541499328 installed <13>Nov 14 06:42:52 rpmi: libEGL-mesa-4:18.2.4-alt1 sisyphus.215982.200 1541499328 installed <13>Nov 14 06:42:52 rpmi: libEGL-7:1.1.0-alt3 sisyphus.215982.100 1541498632 installed <13>Nov 14 06:42:52 rpmi: libglvnd-devel-7:1.1.0-alt3 sisyphus.215982.100 1541498632 installed <13>Nov 14 06:42:52 rpmi: libGL-devel-4:18.2.4-alt1 sisyphus.215982.200 1541499328 installed <13>Nov 14 06:42:52 rpmi: libGLU-devel-4:9.0.0-alt1 1347643784 installed <13>Nov 14 06:42:52 rpmi: gcc-c++-common-1.4.22-alt1 1519183788 installed <13>Nov 14 06:42:52 rpmi: libstdc++7-devel-7.3.1-alt5 1531512767 installed <13>Nov 14 06:42:53 rpmi: gcc7-c++-7.3.1-alt5 1531512767 installed <13>Nov 14 06:42:53 rpmi: libtasn1-4.13-alt2 1521133850 installed <13>Nov 14 06:42:54 rpmi: libp11-kit-0.23.9-alt5 1525798298 installed <13>Nov 14 06:42:54 rpmi: rpm-macros-alternatives-0.4.5-alt1.1 1404382149 installed <13>Nov 14 06:42:54 rpmi: alternatives-0.4.5-alt1.1 1404382149 installed <13>Nov 14 06:42:54 rpmi: ca-certificates-2018.11.12-alt1 sisyphus.216395.300 1542114035 installed <13>Nov 14 06:42:54 rpmi: ca-trust-0.1.1-alt2 1515595785 installed <13>Nov 14 06:42:54 rpmi: p11-kit-trust-0.23.9-alt5 1525798298 installed <13>Nov 14 06:42:54 rpmi: libcrypto1.1-1.1.0i-alt1 1535471315 installed <13>Nov 14 06:42:54 rpmi: libssl1.1-1.1.0i-alt1 1535471315 installed <13>Nov 14 06:42:54 rpmi: rpm-build-python3-0.1.13.1-alt2 1535450458 installed <13>Nov 14 06:42:54 rpmi: tests-for-installed-python3-pkgs-0.1.13.1-alt2 1535450458 installed <13>Nov 14 06:42:54 rpmi: python3-3.6.5-alt1.1 1535734576 installed <13>Nov 14 06:42:55 rpmi: python3-base-3.6.5-alt1.1 1535734576 installed <13>Nov 14 06:42:55 rpmi: libpython3-3.6.5-alt1.1 1535734576 installed <13>Nov 14 06:42:55 rpmi: python3-dev-3.6.5-alt1.1 1535734576 installed <13>Nov 14 06:42:55 rpmi: gcc-c++-7-alt6 1528289187 installed <13>Nov 14 06:42:55 rpmi: libfltk-devel-1.3.3-alt2 1487804054 installed <13>Nov 14 06:42:55 rpmi: zlib-devel-1.2.8-alt1 1371079011 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/seaview-4.6-alt1.nosrc.rpm Installing seaview-4.6-alt1.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.38183 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf seaview + echo 'Source #0 (seaview_4.6.tar.gz):' Source #0 (seaview_4.6.tar.gz): + /bin/gzip -dc /usr/src/RPM/SOURCES/seaview_4.6.tar.gz + /bin/tar -xf - + cd seaview + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #0 (no-interactive.patch):' Patch #0 (no-interactive.patch): + /usr/bin/patch -p1 patching file trees.cxx + chmod -x addbootstrap.cxx align.cxx comlines.cxx concatenate.cxx custom.cxx least_squares_brl.cxx load_seq.cxx nexus.cxx pdf_or_ps.cxx pseudoterminal.cxx racnuc_fetch.cxx regions.cxx resource.cxx seaview.cxx statistics.cxx svg.cxx threads.cxx treedraw.cxx trees.cxx unrooted.cxx use_mase_files.cxx viewasprots.cxx win32_extras.cxx xfmatpt.cxx + chmod -x csrc/bionj.c csrc/dnapars.c csrc/lwl.c csrc/md5.c csrc/misc_acnuc.c csrc/parser.c csrc/parser.h csrc/phylip.c csrc/phylip.h csrc/phyml_util.c csrc/phyml_util.h csrc/protpars.c csrc/raa_acnuc.c csrc/raa_acnuc.h csrc/seq.c csrc/seq.h csrc/zsockr.c + sed -i 's|^\(CFLAGS.*\)|\1 -g -DFL_LIBRARY|' Makefile + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.92810 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + make -j8 make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF comlines.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF resource.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF regions.cxx regions.cxx: In function 'int create_gblocks_mask(SEA_VIEW*, region*, int, int, int, int, int)': regions.cxx:305:9: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] system(cmd); ~~~~~~^~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF load_seq.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF custom.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF viewasprots.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF concatenate.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF align.cxx align.cxx: In function 'void replace_stars(char*)': align.cxx:1298:7: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(all, 1, l, in); ~~~~~^~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF xfmatpt.cxx xfmatpt.cxx:208:79: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] Fl_Widget *postscript = cre_button(fin, curr_y, &width, but_height, fontsize, "Write "PDF_OR_PS); ^ xfmatpt.cxx:873:14: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fl_message("Dot plot is now in file\n%s\nin "PDF_OR_PS" format", surface->outfname()); ^ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF racnuc_fetch.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF nexus.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF statistics.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF least_squares_brl.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF pseudoterminal.cxx pseudoterminal.cxx: In function 'int run_external_prog_in_pseudoterm(char*, const char*, const char*)': pseudoterminal.cxx:342:11: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)', declared with attribute warn_unused_result [-Wunused-result] freopen(dialogfname, "r", stdin); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ pseudoterminal.cxx:344:10: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)', declared with attribute warn_unused_result [-Wunused-result] freopen(slavename, "a", stderr); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF use_mase_files.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF threads.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF pdf_or_ps.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -I. -Dunix -O3 -I. -Icsrc -DNO_PDF FL/Fl_Native_File_Chooser_FLTK.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF addbootstrap.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF svg.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/parser.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/zsockr.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/md5.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/misc_acnuc.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF seaview.cxx seaview.cxx:3317:21: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] strcat(suggested, "."PDF_OR_PS_EXT); ^ seaview.cxx:3427:17: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] pdf_form->label("Set "PDF_OR_PS" output options"); ^ seaview.cxx:5003:6: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] {"Prepare "PDF_OR_PS"", 0, file_menu_callback, 0, 0}, ^ seaview.cxx:5004:6: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] {""PDF_OR_PS" options...", 0, file_menu_callback, 0, FL_MENU_DIVIDER}, ^ seaview.cxx: In function 'void delete_tmp_filename(const char*)': seaview.cxx:638:9: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] system(fname); ~~~~~~^~~~~~~ seaview.cxx: In function 'char* run_and_close_native_file_chooser(Fl_Native_File_Chooser*, int)': seaview.cxx:2876:38: warning: ignoring return value of 'int chdir(const char*)', declared with attribute warn_unused_result [-Wunused-result] if( *last_visited_directory )chdir(last_visited_directory); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF unrooted.cxx make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF trees.cxx trees.cxx: In function 'void run_phyml_callback(Fl_Widget*, void*)': trees.cxx:1234:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(bootstrap_trees, l, 1, in); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ trees.cxx: In function 'void command_line_phylogeny(int, char**)': trees.cxx:2691:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread(utree, s, 1, in); ~~~~~^~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/protpars.c csrc/protpars.c: In function 'protpars': csrc/protpars.c:2097:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(tree, L, 1, outtree); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/bionj.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/dnapars.c csrc/dnapars.c: In function 'dnapars': csrc/dnapars.c:1685:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(tree, L, 1, outtree); ^~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -c -Dunix -O3 -I. -Icsrc -DNO_PDF treedraw.cxx treedraw.cxx:213:6: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] {"Save as "PDF_OR_PS"", 0, file_callback, NULL, 0}, ^ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/phylip.c In file included from /usr/include/stdio.h:862:0, from csrc/phylip.c:32: In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:9, inlined from 'readlong' at csrc/phylip.c:467:5: /usr/include/bits/stdio2.h:260:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer return __fgets_chk_warn (__s, __bos (__s), __n, __stream); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:9, inlined from 'initcategs' at csrc/phylip.c:603:5: /usr/include/bits/stdio2.h:260:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer return __fgets_chk_warn (__s, __bos (__s), __n, __stream); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:9, inlined from 'initprobcat' at csrc/phylip.c:634:5: /usr/include/bits/stdio2.h:260:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer return __fgets_chk_warn (__s, __bos (__s), __n, __stream); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:9, inlined from 'initfreqs' at csrc/phylip.c:1021:5: /usr/include/bits/stdio2.h:260:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer return __fgets_chk_warn (__s, __bos (__s), __n, __stream); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'fgets', inlined from 'getstryng' at csrc/phylip.c:236:9, inlined from 'readlong' at csrc/phylip.c:467:5, inlined from 'initnumlines' at csrc/phylip.c:1126:20: /usr/include/bits/stdio2.h:260:9: warning: call to '__fgets_chk_warn' declared with attribute warning: fgets called with bigger size than length of destination buffer return __fgets_chk_warn (__s, __bos (__s), __n, __stream); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/phyml_util.c csrc/phyml_util.c: In function 'Warn_And_Exit': csrc/phyml_util.c:47:2: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(stdin,"%c",&c); ^~~~~~~~~~~~~~~~~~~~~ make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/lwl.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/raa_acnuc.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' gcc -c -O3 -Dunix -Icsrc csrc/seq.c make: Leaving directory '/usr/src/RPM/BUILD/seaview' make: Entering directory '/usr/src/RPM/BUILD/seaview' g++ -o seaview seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o Fl_Native_File_Chooser_FLTK.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o `fltk-config --use-images --ldflags` -ldl -lpthread -lz make: Leaving directory '/usr/src/RPM/BUILD/seaview' + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.41989 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/seaview-buildroot + : + /bin/rm -rf -- /usr/src/tmp/seaview-buildroot + cd seaview + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/seaview + mkdir -p /usr/src/tmp/seaview-buildroot/usr/bin + mkdir -p /usr/src/tmp/seaview-buildroot//usr/share/man/man1 + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/applications/ + install -m 755 seaview /usr/src/tmp/seaview-buildroot//usr/bin + install -m 644 seaview.html /usr/src/tmp/seaview-buildroot/usr/share/seaview/ + install -m 644 /usr/src/RPM/SOURCES/seaview.desktop /usr/src/tmp/seaview-buildroot/usr/share/applications/ + mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/ + install -m 0644 -p seaview.xpm /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/seaview.xpm + install -m 644 seaview.1 /usr/src/tmp/seaview-buildroot//usr/share/man/man1 + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/seaview-buildroot (auto) Verifying and fixing files in /usr/src/tmp/seaview-buildroot (binconfig,pkgconfig,libtool,desktop) /usr/share/applications/seaview.desktop: performed minor cleanup: 6c6 < Icon=seaview.xpm --- > Icon=seaview Checking contents of files in /usr/src/tmp/seaview-buildroot/ (default) Compressing files in /usr/src/tmp/seaview-buildroot (auto) Verifying ELF objects in /usr/src/tmp/seaview-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) verify-elf: WARNING: ./usr/bin/seaview: uses non-LFS functions: fgetpos fopen freopen fsetpos mkstemp open Hardlinking identical .pyc and .opt-?.pyc files Hardlinking identical .pyc and .pyo files Executing(%check): /bin/sh -e /usr/src/tmp/rpm-tmp.1056 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + exit 0 Processing files: seaview-4.6-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.52334 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd seaview + DOCDIR=/usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.6 + export DOCDIR + rm -rf /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.6 + /bin/mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.6 + cp -prL seaview.1.xml example.nxs /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.6 + chmod -R go-w /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.6 + chmod -R a+rX /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-4.6 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.nHueZt find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.pO6r0I find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks) Requires: /lib/ld-linux.so.2, libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.11), libc.so.6(GLIBC_2.15), libc.so.6(GLIBC_2.2), libc.so.6(GLIBC_2.2.1), libc.so.6(GLIBC_2.3), libc.so.6(GLIBC_2.3.4), libc.so.6(GLIBC_2.4), libc.so.6(GLIBC_2.7), libfltk.so.2 >= set: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, libfltk_images.so.2 >= set:jfWg1JaebIlCT0Tk9Z0EM7, libgcc_s.so.1(GCC_3.0), libm.so.6(GLIBC_2.0), libm.so.6(GLIBC_2.1), libpthread.so.0(GLIBC_2.0), libpthread.so.0(GLIBC_2.1), libstdc++.so.6(CXXABI_1.3), libstdc++.so.6(CXXABI_1.3.8), libstdc++.so.6(CXXABI_1.3.9), libstdc++.so.6(GLIBCXX_3.4), libz.so.1 >= set:kic1428UZj1, rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.QHQ4uB Creating seaview-debuginfo package Processing files: seaview-debuginfo-4.6-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.2uPGxP find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.EMbfVk find-requires: running scripts (debuginfo) Requires: seaview = 4.6-alt1, /usr/lib/debug/lib/ld-linux.so.2.debug, debug(libc.so.6), debug(libfltk.so.2), debug(libfltk_images.so.2), debug(libgcc_s.so.1), debug(libm.so.6), debug(libpthread.so.0), debug(libstdc++.so.6), debug(libz.so.1) Wrote: /usr/src/RPM/RPMS/i586/seaview-4.6-alt1.i586.rpm Wrote: /usr/src/RPM/RPMS/i586/seaview-debuginfo-4.6-alt1.i586.rpm 39.87user 1.64system 0:39.64elapsed 104%CPU (0avgtext+0avgdata 57516maxresident)k 0inputs+0outputs (0major+539947minor)pagefaults 0swaps 55.50user 5.04system 1:09.19elapsed 87%CPU (0avgtext+0avgdata 123012maxresident)k 376inputs+0outputs (0major+985551minor)pagefaults 0swaps --- seaview-4.6-alt1.i586.rpm.repo 2016-04-27 09:29:18.000000000 +0000 +++ seaview-4.6-alt1.i586.rpm.hasher 2018-11-14 06:43:41.653130723 +0000 @@ -21,3 +21,3 @@ Requires: libc.so.6(GLIBC_2.7) -Requires: libfltk.so.2 >= set: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 +Requires: libfltk.so.2 >= set: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 Requires: rpmlib(SetVersions) @@ -30,2 +30,4 @@ Requires: libstdc++.so.6(CXXABI_1.3) +Requires: libstdc++.so.6(CXXABI_1.3.8) +Requires: libstdc++.so.6(CXXABI_1.3.9) Requires: libstdc++.so.6(GLIBCXX_3.4)