<86>May 4 03:55:50 userdel[747614]: delete user 'rooter' <86>May 4 03:55:50 userdel[747614]: removed group 'rooter' owned by 'rooter' <86>May 4 03:55:50 userdel[747614]: removed shadow group 'rooter' owned by 'rooter' <86>May 4 03:55:50 groupadd[747680]: group added to /etc/group: name=rooter, GID=1877 <86>May 4 03:55:50 groupadd[747680]: group added to /etc/gshadow: name=rooter <86>May 4 03:55:50 groupadd[747680]: new group: name=rooter, GID=1877 <86>May 4 03:55:50 useradd[747740]: new user: name=rooter, UID=1877, GID=1877, home=/root, shell=/bin/bash, from=none <86>May 4 03:55:50 userdel[747803]: delete user 'builder' <86>May 4 03:55:50 userdel[747803]: removed group 'builder' owned by 'builder' <86>May 4 03:55:50 userdel[747803]: removed shadow group 'builder' owned by 'builder' <86>May 4 03:55:50 groupadd[747858]: group added to /etc/group: name=builder, GID=1878 <86>May 4 03:55:50 groupadd[747858]: group added to /etc/gshadow: name=builder <86>May 4 03:55:50 groupadd[747858]: new group: name=builder, GID=1878 <86>May 4 03:55:50 useradd[747895]: new user: name=builder, UID=1878, GID=1878, home=/usr/src, shell=/bin/bash, from=none <13>May 4 03:55:54 rpmi: libgts-0.7.6-alt2.drc20130205.1 sisyphus+275722.100.1.1 1624749869 installed <13>May 4 03:55:54 rpmi: desktop-file-utils-0.26-alt6 sisyphus+331944.100.1.3 1697550026 installed <13>May 4 03:55:54 rpmi: shared-mime-info-2.4-alt1 sisyphus+334259.100.1.1 1699787316 installed <13>May 4 03:55:54 rpmi: gsettings-desktop-schemas-data-46.0-alt1 sisyphus+343025.100.4.2 1710847127 installed <13>May 4 03:55:54 rpmi: libgio-2.80.0-alt2.1 sisyphus+343856.100.1.1 1711642821 installed <13>May 4 03:55:54 rpmi: gsettings-desktop-schemas-46.0-alt1 sisyphus+343025.100.4.2 1710847127 installed <13>May 4 03:55:54 rpmi: libmpdec3-2.5.1-alt3 sisyphus+314490.500.5.1 1675432004 installed <13>May 4 03:55:54 rpmi: libgdbm-1.8.3-alt10 sisyphus+278100.1600.1.1 1626058413 installed <13>May 4 03:55:54 rpmi: libexpat-2.5.0-alt1 sisyphus+309227.100.1.1 1667075764 installed <13>May 4 03:55:54 rpmi: libb2-0.98.1-alt1_1 sisyphus+291614.100.1.1 1638962877 installed <13>May 4 03:55:54 rpmi: xml-utils-1:2.12.6-alt1 sisyphus+347327.100.1.1 1714660882 installed <13>May 4 03:55:54 rpmi: rpm-build-gir-0.7.3-alt3.1 sisyphus+319393.100.1.1 1682538783 installed <13>May 4 03:55:54 rpmi: libp11-kit-1:0.25.3-alt2 sisyphus+336533.100.1.1 1702645560 installed <13>May 4 03:55:54 rpmi: libtasn1-4.19.0-alt3 sisyphus+327816.100.1.1 1692802615 installed <13>May 4 03:55:54 rpmi: rpm-macros-alternatives-0.5.2-alt2 sisyphus+315270.200.2.1 1676457367 installed <13>May 4 03:55:54 rpmi: alternatives-0.5.2-alt2 sisyphus+315270.200.2.1 1676457367 installed <13>May 4 03:55:54 rpmi: ca-certificates-2024.02.24-alt1 sisyphus+341362.100.1.1 1708791001 installed <13>May 4 03:55:54 rpmi: ca-trust-0.2.0-alt1 sisyphus+344843.100.1.1 1712743326 installed <13>May 4 03:55:54 rpmi: p11-kit-trust-1:0.25.3-alt2 sisyphus+336533.100.1.1 1702645560 installed <13>May 4 03:55:54 rpmi: libcrypto3-3.1.5-alt2 sisyphus+343320.140.3.1 1711982212 installed <13>May 4 03:55:54 rpmi: libssl3-3.1.5-alt2 sisyphus+343320.140.3.1 1711982212 installed <13>May 4 03:55:54 rpmi: python3-3.12.2-alt1 sisyphus+341702.200.1.1 1709232871 installed <13>May 4 03:55:55 rpmi: python3-base-3.12.2-alt1 sisyphus+341702.200.1.1 1709232871 installed <13>May 4 03:55:55 rpmi: python3-module-packaging-24.0-alt1 sisyphus+342487.100.2.1 1710407438 installed <13>May 4 03:55:55 rpmi: glib2-devel-2.80.0-alt2.1 sisyphus+343856.100.1.1 1711642821 installed <13>May 4 03:55:55 rpmi: python3-module-py3dephell-0.1.0-alt2 sisyphus+328191.600.5.1 1693609196 installed <13>May 4 03:55:55 rpmi: tests-for-installed-python3-pkgs-0.1.25-alt1 sisyphus+344685.100.1.1 1712595070 installed <13>May 4 03:55:55 rpmi: rpm-build-python3-0.1.25-alt1 sisyphus+344685.100.1.1 1712595070 installed <13>May 4 03:55:55 rpmi: libgts-devel-0.7.6-alt2.drc20130205.1 sisyphus+275722.100.1.1 1624749869 installed Building target platforms: x86_64 Building for target x86_64 Wrote: /usr/src/in/nosrpm/gerris-20131206-alt1.nosrc.rpm (w1.gzdio) Installing gerris-20131206-alt1.src.rpm Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.59810 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf gerris-20131206 + echo 'Source #0 (gerris-20131206.tar):' Source #0 (gerris-20131206.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/gerris-20131206.tar + cd gerris-20131206 + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #0 (Port-to-Python-3.patch):' Patch #0 (Port-to-Python-3.patch): + /usr/bin/patch -p1 patching file doc/examples/Makefile.am patching file doc/examples/Makefile.in Hunk #1 succeeded at 1176 (offset -64 lines). Hunk #2 succeeded at 1345 (offset -64 lines). patching file doc/examples/atomisation.sh patching file doc/examples/boussinesq.sh patching file doc/examples/bubble.sh patching file doc/examples/column.sh patching file doc/examples/cyclone.sh patching file doc/examples/cylinder.sh patching file doc/examples/dam.sh patching file doc/examples/depend.py patching file doc/examples/forcedturbulence.sh patching file doc/examples/garden.sh patching file doc/examples/gfs2doc.in patching file doc/examples/gfs2tex patching file doc/examples/gfs2tex.py patching file doc/examples/hump.sh patching file doc/examples/logo.sh patching file doc/examples/monai.sh patching file doc/examples/plateau.sh patching file doc/examples/rt.sh patching file doc/examples/ship.sh patching file doc/examples/shock.sh patching file doc/examples/starting.sh patching file doc/examples/tangaroa.sh patching file doc/examples/test.py patching file doc/examples/tides.sh patching file doc/examples/tsunami.sh patching file doc/examples/viscmix.sh patching file doc/examples/wingtip.sh patching file test/Makefile.am patching file test/Makefile.in patching file test/advection.sh patching file test/advection/advection.sh patching file test/annulus.sh patching file test/annulus/annulus.sh patching file test/axi.sh patching file test/axi/axi.sh patching file test/axi/viscous/viscous.sh patching file test/axiadvection.sh patching file test/boundaries.sh patching file test/boundaries/boundaries.sh patching file test/bump.sh patching file test/bump/bump.sh patching file test/capwave.sh patching file test/capwave/capwave.sh patching file test/channel.sh patching file test/channel/channel.sh patching file test/check.py patching file test/circle.sh patching file test/circle/circle.sh patching file test/conservation.sh patching file test/coriolis.sh patching file test/coriolis/coriolis.sh patching file test/cosine.sh patching file test/cosine/cosine.sh patching file test/couette.sh patching file test/couette/couette.sh patching file test/cylinder.sh patching file test/cylinder/cylinder.sh patching file test/debye.sh patching file test/debye/debye.sh patching file test/depend.py patching file test/diffusion.sh patching file test/dumbell.sh patching file test/electro.sh patching file test/electro/electro.sh patching file test/gaussian.sh patching file test/gaussian/gaussian.sh patching file test/geo.sh patching file test/geo/beta/beta.sh patching file test/geo/geo.sh patching file test/geo/river/geo.sh patching file test/gfs2tex patching file test/groundwater.sh patching file test/groundwater/groundwater.sh patching file test/harmonic.sh patching file test/harmonic/harmonic.sh patching file test/height.sh patching file test/hexagon.sh patching file test/hexagon/hexagon.sh patching file test/hydrostatic.sh patching file test/injectionaxi.sh patching file test/kinetic.sh patching file test/lake.sh patching file test/lake/river/river.sh patching file test/lake/stratified/stratified.sh patching file test/lid.sh patching file test/lid/explicit/lid.sh patching file test/lid/lid.sh patching file test/lonlat.sh patching file test/merging.sh patching file test/merging/merging.sh patching file test/nonlinear.sh patching file test/nonlinear/nonlinear.sh patching file test/nz.sh patching file test/oscillation.sh patching file test/oscillation/oscillation.sh patching file test/parabola.sh patching file test/parabola/parabola.sh patching file test/periodic.sh patching file test/periodic/periodic.sh patching file test/planar.sh patching file test/plate.sh patching file test/plateau.sh patching file test/poiseuille.sh patching file test/poiseuille/poiseuille.sh patching file test/poiseuille/river/river.sh patching file test/poisson.sh patching file test/poisson/poisson.sh patching file test/reynolds.sh patching file test/reynolds/reynolds.sh patching file test/reynolds/skew/skew.sh patching file test/reynolds/skewbox/skew.sh patching file test/rossby.sh patching file test/rossby/rossby.sh patching file test/rotate.sh patching file test/sessile.sh patching file test/sessile/sessile.sh patching file test/shear.sh patching file test/shear/concentration/concentration.sh patching file test/shear/shear.sh patching file test/shock.sh patching file test/shock/layered/layered.sh patching file test/shock/shock.sh patching file test/shore.sh patching file test/shore/shore.sh patching file test/source.sh patching file test/source/source.sh patching file test/spurious.sh patching file test/spurious/spurious.sh patching file test/still.sh patching file test/strouhal.sh patching file test/strouhal/strouhal.sh patching file test/swirl.sh patching file test/swirl/swirl.gfs patching file test/terrain.sh patching file test/terrain/terrain.sh patching file test/test.py patching file test/wannier.sh patching file test/wannier/bipolar/bipolar.sh patching file test/wannier/wannier.sh patching file test/waves.sh patching file test/waves/waves.sh + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.59810 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd gerris-20131206 + autoreconf -fisv autoreconf-default: export WARNINGS= autoreconf-default: Entering directory '.' autoreconf-default: configure.ac: not using Gettext autoreconf-default: running: aclocal --force -I m4 autoreconf-default: configure.ac: tracing autoreconf-default: running: libtoolize --force --install libtoolize-default: putting auxiliary files in '.'. libtoolize-default: linking file './config.guess' libtoolize-default: linking file './config.sub' libtoolize-default: linking file './install-sh' libtoolize-default: linking file './ltmain.sh' libtoolize-default: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize-default: linking file 'm4/libtool.m4' libtoolize-default: linking file 'm4/ltoptions.m4' libtoolize-default: linking file 'm4/ltsugar.m4' libtoolize-default: linking file 'm4/ltversion.m4' libtoolize-default: linking file 'm4/lt~obsolete.m4' autoreconf-default: configure.ac: not using Intltool autoreconf-default: configure.ac: not using Gtkdoc autoreconf-default: running: aclocal --force -I m4 autoreconf-default: running: /usr/bin/autoconf-2.71 --force configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:705: AM_INIT_AUTOMAKE is expanded from... configure.ac:50: the top level configure.ac:53: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:53: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:1057: AM_CONFIG_HEADER is expanded from... configure.ac:53: the top level configure.ac:117: warning: The macro `AC_LIBTOOL_WIN32_DLL' is obsolete. configure.ac:117: You should run autoupdate. m4/ltoptions.m4:148: AC_LIBTOOL_WIN32_DLL is expanded from... configure.ac:117: the top level configure.ac:117: warning: AC_LIBTOOL_WIN32_DLL: Remove this warning and the call to _LT_SET_OPTION when you configure.ac:117: put the 'win32-dll' option into LT_INIT's first parameter. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... m4/ltoptions.m4:148: AC_LIBTOOL_WIN32_DLL is expanded from... configure.ac:117: the top level configure.ac:118: warning: The macro `AM_PROG_LIBTOOL' is obsolete. configure.ac:118: You should run autoupdate. m4/libtool.m4:101: AM_PROG_LIBTOOL is expanded from... configure.ac:118: the top level configure.ac:143: warning: The macro `AC_ISC_POSIX' is obsolete. configure.ac:143: You should run autoupdate. ./lib/autoconf/specific.m4:536: AC_ISC_POSIX is expanded from... configure.ac:143: the top level configure.ac:144: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:144: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:144: the top level configure.ac:148: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:148: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... configure.ac:148: the top level configure.ac:183: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:183: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... configure.ac:183: the top level configure.ac:276: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:276: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... acinclude.m4:239: AM_PATH_GSL is expanded from... configure.ac:276: the top level configure.ac:276: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:276: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:239: AM_PATH_GSL is expanded from... configure.ac:276: the top level autoreconf-default: running: /usr/bin/autoheader-2.71 --force autoreconf-default: running: automake --add-missing --force-missing configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:50: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.ac:108: installing './compile' configure.ac:50: installing './missing' doc/Makefile.am:9: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') doc/Makefile.am:12: warning: deprecated feature: target 'autoclass' overrides 'autoclass$(EXEEXT)' doc/Makefile.am:12: change your target to read 'autoclass$(EXEEXT)' /usr/share/automake-1.16/am/program.am: target 'autoclass$(EXEEXT)' was defined here doc/Makefile.am:7: while processing program 'autoclass' doc/Makefile.am: installing './depcomp' doc/examples/Makefile.am:118: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') doc/examples/Makefile.am:123: warning: deprecated feature: target 'classes' overrides 'classes$(EXEEXT)' doc/examples/Makefile.am:123: change your target to read 'classes$(EXEEXT)' /usr/share/automake-1.16/am/program.am: target 'classes$(EXEEXT)' was defined here doc/examples/Makefile.am:121: while processing program 'classes' doc/examples/Makefile.am:127: warning: deprecated feature: target 'modules' overrides 'modules$(EXEEXT)' doc/examples/Makefile.am:127: change your target to read 'modules$(EXEEXT)' /usr/share/automake-1.16/am/program.am: target 'modules$(EXEEXT)' was defined here doc/examples/Makefile.am:121: while processing program 'modules' parallel-tests: installing './test-driver' modules/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') src/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') tools/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') autoreconf-default: Leaving directory '.' + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 ' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 ' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 ' + export FFLAGS + FCFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 ' + export FCFLAGS + '[' -n '' ']' ++ printf %s '-pipe -frecord-gcc-switches -Wall -g -O2 ' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS=' ' + export ASFLAGS + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + configure_runstatedir_flags= + grep -qF runstatedir=DIR ./configure + configure_runstatedir_flags=--runstatedir=/var/run + ./configure --build=x86_64-alt-linux --host=x86_64-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --disable-silent-rules --runstatedir=/var/run --without-included-gettext --disable-mpi --disable-static configure: WARNING: unrecognized options: --without-included-gettext checking for a BSD-compatible install... /usr/bin/ginstall -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for x86_64-alt-linux-gcc... x86_64-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-alt-linux-gcc accepts -g... yes checking for x86_64-alt-linux-gcc option to enable C11 features... none needed checking whether x86_64-alt-linux-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-alt-linux-gcc... none checking build system type... x86_64-alt-linux-gnu checking host system type... x86_64-alt-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by x86_64-alt-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-alt-linux-gnu file names to x86_64-alt-linux-gnu format... func_convert_file_noop checking how to convert x86_64-alt-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-alt-linux-file... no checking for file... file checking for x86_64-alt-linux-objdump... objdump checking how to recognize dependent libraries... (cached) pass_all checking for x86_64-alt-linux-dlltool... dlltool checking how to associate runtime and link libraries... printf %s\n checking for x86_64-alt-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-alt-linux-strip... no checking for strip... strip checking for x86_64-alt-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from x86_64-alt-linux-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-alt-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-alt-linux-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-alt-linux-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-alt-linux-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-alt-linux-gcc static flag -static works... no checking if x86_64-alt-linux-gcc supports -c -o file.o... yes checking if x86_64-alt-linux-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-alt-linux-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gawk... (cached) gawk checking for library containing strerror... none required checking for egrep... (cached) /usr/bin/grep -E checking whether pointers can be stored in doubles... yes checking for x86_64-alt-linux-pkg-config... no checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for gts >= 0.7.4... yes checking whether modules are supported... yes checking for pkg-config... yes checking for m4... yes checking check whether m4 accepts the -P option... yes checking for pj_fwd in -lproj... no configure: WARNING: libproj not found. Map module will not be available. checking for proj_api.h... no checking for gsl-config... no checking for GSL - version >= 0.2.5... no *** The gsl-config script installed by GSL could not be found *** If GSL was installed in PREFIX, make sure PREFIX/bin is in *** your path, or set the GSL_CONFIG environment variable to the *** full path to gsl-config. checking for nc_open in -lnetcdf... no checking for netcdf.h... no configure: WARNING: GSL and/or netCDF not found. Tide module will not be available. checking for x86_64-alt-linux-g77... no checking for x86_64-alt-linux-xlf... no checking for x86_64-alt-linux-f77... no checking for x86_64-alt-linux-frt... no checking for x86_64-alt-linux-pgf77... no checking for x86_64-alt-linux-cf77... no checking for x86_64-alt-linux-fort77... no checking for x86_64-alt-linux-fl32... no checking for x86_64-alt-linux-af77... no checking for x86_64-alt-linux-xlf90... no checking for x86_64-alt-linux-f90... no checking for x86_64-alt-linux-pgf90... no checking for x86_64-alt-linux-pghpf... no checking for x86_64-alt-linux-epcf90... no checking for x86_64-alt-linux-gfortran... no checking for x86_64-alt-linux-g95... no checking for x86_64-alt-linux-xlf95... no checking for x86_64-alt-linux-f95... no checking for x86_64-alt-linux-fort... no checking for x86_64-alt-linux-ifort... no checking for x86_64-alt-linux-ifc... no checking for x86_64-alt-linux-efc... no checking for x86_64-alt-linux-pgfortran... no checking for x86_64-alt-linux-pgf95... no checking for x86_64-alt-linux-lf95... no checking for x86_64-alt-linux-ftn... no checking for x86_64-alt-linux-nagfor... no checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... no checking for g95... no checking for xlf95... no checking for f95... no checking for fort... no checking for ifort... no checking for ifc... no checking for efc... no checking for pgfortran... no checking for pgf95... no checking for lf95... no checking for ftn... no checking for nagfor... no checking whether the compiler supports GNU Fortran 77... no checking whether accepts -g... no checking for ode-config... no configure: WARNING: ODE not found. ode module will not be available. checking for lis_initialize in -llis... no configure: WARNING: lis not found. lis Module won't be available. checking for fftw3 >= 3 ... no checking for fenv.h... yes checking for unistd.h... (cached) yes checking for getopt.h... yes checking for getopt_long... yes checking for g_mkdtemp... yes checking for open_memstream... yes checking for funopen... no checking for open_memstream... (cached) yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/gerris2D.pc config.status: creating src/gerris3D.pc config.status: creating tools/Makefile config.status: creating modules/Makefile config.status: creating modules/RStarTree/Makefile config.status: creating modules/kdt/Makefile config.status: creating modules/fes2004/Makefile config.status: creating modules/wavewatch/Makefile config.status: creating modules/culvert/Makefile config.status: creating test/Makefile config.status: creating doc/Makefile config.status: creating doc/tutorial/Makefile config.status: creating doc/examples/Makefile config.status: creating doc/manpages/Makefile config.status: creating doc/examples/gfs2doc config.status: creating doc/examples/gfs-highlight config.status: creating doc/examples/crossref.sh config.status: creating desktop/Makefile config.status: creating debian/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --without-included-gettext Configuration summary System = x86_64-alt-linux-gnu C Compiler = x86_64-alt-linux-gcc C Flags = -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 MPI enabled = no GModule support = yes pkg-config = yes m4 = yes m4 options = -P open_memstream = yes Modules map = no tide = no stokes = no wavewatch = no hypre = no lis = no agmg = no ode = no bubbles = no fft = no + make -j16 make all-recursive Making all in src make all-am make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris2D-gerris.o `test -f 'gerris.c' || echo './'`gerris.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gerris.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-mpi_boundary.lo `test -f 'mpi_boundary.c' || echo './'`mpi_boundary.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from mpi_boundary.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-init.lo `test -f 'init.c' || echo './'`init.c init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from init.c:34: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-refine.lo `test -f 'refine.c' || echo './'`refine.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from refine.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-timestep.lo `test -f 'timestep.c' || echo './'`timestep.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from timestep.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-advection.lo `test -f 'advection.c' || echo './'`advection.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from advection.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ advection.c: In function 'set_merged': advection.c:663:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 663 | solid->a); | ^ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-solid.lo `test -f 'solid.c' || echo './'`solid.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from solid.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ solid.c: In function 'paint_mixed_leaf': solid.c:794:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 794 | w/k, i, solid->s[i]); | ^~~~~~~~~~~~~~~~~~ solid.c: In function 'check_area_fractions': solid.c:1010:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1010 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1019:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1019 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1039:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1039 | oi, nsolid->s[oi]); | ^~~~~~~~~~~ solid.c:1053:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1053 | oi, nsolid->s[oi]); | ^~~~~~~~~~~~~~~~ solid.c:1065:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1065 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c:1081:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1081 | i, solid->s[i]); | ^~~~~~~~ solid.c:1095:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1095 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c: In function 'check_solid_fractions': solid.c:1127:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1127 | n, GFS_STATE (children.c[n])->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ solid.c:1145:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1145 | a, GFS_STATE (cell)->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-variable.lo `test -f 'variable.c' || echo './'`variable.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from variable.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-adaptive.lo `test -f 'adaptive.c' || echo './'`adaptive.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from adaptive.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-simulation.lo `test -f 'simulation.c' || echo './'`simulation.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from simulation.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ simulation.c: In function 'load_module': simulation.c:214:7: warning: 'g_module_build_path' is deprecated [-Wdeprecated-declarations] 214 | gchar * path = g_module_build_path (GFS_MODULES_DIR, name); | ^~~~~ In file included from simulation.c:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ simulation.c: In function 'error_handler': simulation.c:1780:39: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 1780 | snprintf (fname, 20, "error-%d.gfs", domain->pid); | ^ In file included from /usr/include/stdio.h:964, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from simulation.c:27: In function 'snprintf', inlined from 'error_handler' at simulation.c:1780:5: /usr/include/bits/stdio2.h:54:10: note: '__builtin___snprintf_chk' output between 12 and 21 bytes into a destination of size 20 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-boundary.lo `test -f 'boundary.c' || echo './'`boundary.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from boundary.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-event.lo `test -f 'event.c' || echo './'`event.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from event.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-poisson.lo `test -f 'poisson.c' || echo './'`poisson.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from poisson.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-output.lo `test -f 'output.c' || echo './'`output.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from output.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-levelset.lo `test -f 'levelset.c' || echo './'`levelset.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from levelset.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-source.lo `test -f 'source.c' || echo './'`source.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from source.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-tension.lo `test -f 'tension.c' || echo './'`tension.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from tension.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ftt.lo `test -f 'ftt.c' || echo './'`ftt.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ftt.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ftt.c:2129: ftt_internal.c: In function 'traverse_all_direct_faces': ftt_internal.c:53:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: 'd' declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: 'datum' declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function 'traverse_all_faces': ftt_internal.c:43:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: 'd' declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: 'datum' declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-cartesian.lo `test -f 'cartesian.c' || echo './'`cartesian.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from cartesian.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-wave.lo `test -f 'wave.c' || echo './'`wave.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from wave.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ocean.lo `test -f 'ocean.c' || echo './'`ocean.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ocean.c:24: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ocean.c: In function 'correct_normal_velocity': ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable] 45 | FttFaceType type; | ^~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-graphic.lo `test -f 'graphic.c' || echo './'`graphic.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from graphic.c:30: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ graphic.c: In function 'grow_curve': graphic.c:1986:17: warning: variable 'p1' set but not used [-Wunused-but-set-variable] 1986 | FttVector p1; | ^~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-unstructured.lo `test -f 'unstructured.c' || echo './'`unstructured.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from unstructured.h:24, from unstructured.c:24: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-balance.lo `test -f 'balance.c' || echo './'`balance.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from event.h:27, from balance.h:27, from balance.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-map.lo `test -f 'map.c' || echo './'`map.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from advection.h:27, from timestep.h:27, from variable.h:29, from map.h:27, from map.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ map.c: In function 'gfs_map_read': map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable] 34 | gboolean class_changed = FALSE; | ^~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-particle.lo `test -f 'particle.c' || echo './'`particle.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particle.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-surface.lo `test -f 'surface.c' || echo './'`surface.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from surface.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris.o gerris.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gerris.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-fluid.lo `test -f 'fluid.c' || echo './'`fluid.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from fluid.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fluid.c:2605:38: warning: argument 4 of type 'gdouble[5]' {aka 'double[5]'} with mismatched bound [-Warray-parameter=] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from fluid.c:27: fluid.h:240:62: note: previously declared as 'gdouble[4]' {aka 'double[4]'} 240 | gdouble f[4*(FTT_DIMENSION - 1)]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ fluid.c:3067:45: warning: argument 2 of type 'FttDirection[2]' with mismatched bound [-Warray-parameter=] 3067 | FttDirection d[FTT_DIMENSION], | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ fluid.h:280:69: note: previously declared as 'FttDirection *' 280 | FttDirection * d, | ~~~~~~~~~~~~~~~^ fluid.c:126:20: warning: 'interpolate_1D2' defined but not used [-Wunused-function] 126 | static GfsGradient interpolate_1D2 (FttCell * cell, | ^~~~~~~~~~~~~~~ fluid.c: In function 'face_bilinear': fluid.c:1151:37: warning: 'd[2]' is used uninitialized [-Wuninitialized] 1151 | d1[0] = d[1]; d1[1] = d[0]; d1[2] = d[2]; | ~~~~~~^~~~~~ fluid.c:1145:16: note: 'd[2]' was declared here 1145 | FttDirection d[3], d1[3]; | ^ In function 'gfs_cell_corner_values', inlined from 'gfs_cell_corner_values' at fluid.c:2602:6: fluid.c:2614:28: warning: array subscript 4 is outside array bounds of 'gdouble[4]' {aka 'double[4]'} [-Warray-bounds=] 2614 | f[4*(FTT_DIMENSION - 1)] = GFS_VALUE (cell, v); fluid.c: In function 'gfs_cell_corner_values': fluid.c:2605:38: note: at offset 32 into object 'f' of size [0, 32] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o mpi_boundary.lo mpi_boundary.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from mpi_boundary.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-utils.lo `test -f 'utils.c' || echo './'`utils.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from utils.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ utils.c: In function 'get_tmp_file': utils.c:57:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 57 | GTimeVal tv; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/gts.h:24, from solid.h:23, from utils.c:36: /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:72:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 72 | g_get_current_time (&tv); | ^~~~~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib/giochannel.h:35, from /usr/include/glib-2.0/glib.h:56: /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function 'current_time': utils.c:653:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 653 | GTimeVal r; | ^~~~~~~~ /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:654:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 654 | g_get_current_time (&r); | ^~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function 'compile': utils.c:699:5: warning: 'g_module_build_path' is deprecated [-Wdeprecated-declarations] 699 | gchar * path = g_module_build_path (GFS_MODULES_DIR, mname); | ^~~~~ In file included from utils.h:28, from boundary.h:24, from domain.h:23, from solid.h:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-domain.lo `test -f 'domain.c' || echo './'`domain.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from domain.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from domain.c:1702: ftt_internal.c: In function 'traverse_all_direct_faces': ftt_internal.c:53:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: 'd' declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: 'datum' declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function 'traverse_all_faces': ftt_internal.c:43:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: 'd' declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: 'datum' declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o variable.lo variable.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from variable.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o advection.lo advection.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from advection.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ advection.c: In function 'set_merged': advection.c:663:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 663 | solid->a); | ^ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o init.lo init.c init.c:33: warning: "_GNU_SOURCE" redefined 33 | # define _GNU_SOURCE | : note: this is the location of the previous definition In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/fenv.h:26, from init.c:34: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o timestep.lo timestep.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from timestep.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-metric.lo `test -f 'metric.c' || echo './'`metric.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from metric.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable] 241 | static double kpu_2d_l4[17][3] = { | ^~~~~~~~~ metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable] 221 | static double kpu_2d_l2[5][3] = { | ^~~~~~~~~ metric.c: In function 'matrix_a': metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1408 | a += excess_of_quad (&r[i0+i][j0+j].x1, &r[i0+i+1][j0+j].x1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1409 | &r[i0+i+1][j0+j+1].x1, &r[i0+i][j0+j+1].x1); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1408:12: note: referencing argument 1 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 2 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 3 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 4 of type 'const double[3]' metric.c:1034:15: note: in a call to function 'excess_of_quad' 1034 | static double excess_of_quad (const double v1[3], const double v2[3], | ^~~~~~~~~~~~~~ metric.c: In function 'matrix_hy': metric.c:1429:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1429 | hy += angle_between_vectors (&r[i0][j0+j].x1, &r[i0][j0+j+1].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1429:11: note: referencing argument 1 of type 'const double[3]' metric.c:1429:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1429:11: note: referencing argument 2 of type 'const double[3]' metric.c:1018:15: note: in a call to function 'angle_between_vectors' 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ metric.c: In function 'matrix_hx': metric.c:1419:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1419 | hx += angle_between_vectors (&r[i0+i][j0].x1, &r[i0+i+1][j0].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1419:11: note: referencing argument 1 of type 'const double[3]' metric.c:1419:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1419:11: note: referencing argument 2 of type 'const double[3]' metric.c:1018:15: note: in a call to function 'angle_between_vectors' 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1039:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1039 | plane_normal (v1, v2, plane1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1039:3: note: referencing argument 1 of type 'const double[3]' metric.c:1039:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1039:3: note: referencing argument 2 of type 'const double[3]' metric.c:1039:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1040:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1040 | plane_normal (v2, v3, plane2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1040:3: note: referencing argument 1 of type 'const double[3]' metric.c:1040:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1040:3: note: referencing argument 2 of type 'const double[3]' metric.c:1040:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1041:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1041 | plane_normal (v3, v4, plane3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1041:3: note: referencing argument 1 of type 'const double[3]' metric.c:1041:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1041:3: note: referencing argument 2 of type 'const double[3]' metric.c:1041:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1042:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1042 | plane_normal (v4, v1, plane4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1042:3: note: referencing argument 1 of type 'const double[3]' metric.c:1042:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1042:3: note: referencing argument 2 of type 'const double[3]' metric.c:1042:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o refine.lo refine.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from refine.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-river.lo `test -f 'river.c' || echo './'`river.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from river.c:55: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-moving.lo `test -f 'moving.c' || echo './'`moving.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from moving.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from moving.c:49: moving2.c: In function 'second_order_face_fractions': moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable] 257 | gdouble dt1, dt2, dto1, dto2, s1, s2; | ^~ moving2.c: In function 'old_solid_fractions_from_children': moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 731 | for (i = 0; i < FTT_CELLS; i++) | ^~~ moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 735 | gfs_cell_init_solid_fractions_from_children (cell); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o poisson.lo poisson.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from poisson.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o solid.lo solid.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from solid.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ solid.c: In function 'set_solid_fractions_from_surface': solid.c:561:21: warning: comparison between 'FttComponent' and 'enum ' [-Wenum-compare] 561 | for (c = 1; c < FTT_NEIGHBORS; c++) | ^ solid.c: In function 'paint_mixed_leaf': solid.c:794:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 794 | w/k, i, solid->s[i]); | ^~~~~~~~~~~~~~~~~~ solid.c: In function 'check_area_fractions': solid.c:1010:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1010 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1019:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1019 | bb.x2, bb.y2, bb.z2); | ^~~~~~~~~~~~ solid.c:1039:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1039 | oi, nsolid->s[oi]); | ^~~~~~~~~~~ solid.c:1053:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1053 | oi, nsolid->s[oi]); | ^~~~~~~~~~~~~~~~ solid.c:1065:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1065 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c:1081:34: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1081 | i, solid->s[i]); | ^~~~~~~~ solid.c:1095:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1095 | i, solid->s[i]); | ^~~~~~~~~~~~~ solid.c: In function 'check_solid_fractions': solid.c:1127:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1127 | n, GFS_STATE (children.c[n])->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ solid.c:1145:27: warning: Deprecated pre-processor symbol: replace with "((const char*) (__func__))" 1145 | a, GFS_STATE (cell)->solid->a); | ^~~~~~~~~~~~~~~~~~~~~~ In file included from solid.c:338: isocube.h: At top level: isocube.h:95:21: warning: 'corner' defined but not used [-Wunused-variable] 95 | static FttDirection corner[8][3] = { | ^~~~~~ isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable] 66 | static FttVector cvertex[8] = { | ^~~~~~~ isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable] 52 | static guint connectv[12][2][4] = { | ^~~~~~~~ isocube.h:47:18: warning: 'edge' defined but not used [-Wunused-variable] 47 | static FttVector edge[12][2] = { | ^~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o boundary.lo boundary.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from boundary.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o output.lo output.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from output.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-vof.lo `test -f 'vof.c' || echo './'`vof.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from vof.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vof.c: In function 'gfs_height_curvature': vof.c:2619:11: warning: unused variable 'area' [-Wunused-variable] 2619 | gdouble area = gfs_vof_center (cell, t, &fc); | ^~~~ vof.c: In function 'gfs_height_curvature_new': vof.c:2871:11: warning: unused variable 'area' [-Wunused-variable] 2871 | gdouble area = gfs_vof_center (cell, GFS_VARIABLE_TRACER_VOF (t), &fc); | ^~~~ vof.c: At top level: vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function] 1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v) | ^~~~~~~~~~ vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function] 850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n) | ^~~~~~~~~~~~~ vof.c: In function 'add_vof_center': vof.c:2443:5: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2443 | parabola_fit_add (fit, &c.x, w*area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2443:5: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'myc_normal': vof.c:897:3: warning: 'mycs' accessing 16 bytes in a region of size 8 [-Wstringop-overflow=] 897 | mycs (f, &n->x); | ^~~~~~~~~~~~~~~ vof.c:897:3: note: referencing argument 2 of type 'double[2]' In file included from vof.c:887: myc2d.h:6:13: note: in a call to function 'mycs' 6 | static void mycs(double c[3][3],double mxy[2]) | ^~~~ vof.c: In function 'gfs_fit_curvature': vof.c:2508:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2508 | parabola_fit_add (&fit, &fc.x, area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2508:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'gfs_height_curvature': vof.c:2625:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2625 | parabola_fit_add (&fit, &fc.x, PARABOLA_FIT_CENTER_WEIGHT); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2625:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'gfs_height_curvature_new': vof.c:2877:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2877 | parabola_fit_add (&fit, &fc.x, PARABOLA_FIT_CENTER_WEIGHT); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2877:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ftt.lo ftt.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ftt.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ftt.c:2129: ftt_internal.c: In function 'traverse_all_direct_faces': ftt_internal.c:53:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: 'd' declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: 'datum' declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function 'traverse_all_faces': ftt_internal.c:43:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: 'd' declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: 'datum' declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o cartesian.lo cartesian.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from cartesian.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o levelset.lo levelset.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from levelset.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o wave.lo wave.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from wave.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o adaptive.lo adaptive.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from adaptive.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o tension.lo tension.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from tension.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o surface.lo surface.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from surface.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o fluid.lo fluid.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from fluid.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ fluid.c: In function 'gfs_cell_coarse_fine': fluid.c:1918:42: warning: unused variable 'gz4' [-Wunused-variable] 1918 | double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa; | ^~~ fluid.c:1918:14: warning: unused variable 'gz3' [-Wunused-variable] 1918 | double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa; | ^~~ fluid.c:1916:42: warning: unused variable 'gy4' [-Wunused-variable] 1916 | double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa; | ^~~ fluid.c:1916:14: warning: unused variable 'gy3' [-Wunused-variable] 1916 | double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa; | ^~~ fluid.c:1914:42: warning: unused variable 'gx4' [-Wunused-variable] 1914 | double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa; | ^~~ fluid.c:1914:14: warning: unused variable 'gx3' [-Wunused-variable] 1914 | double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa; | ^~~ fluid.c: At top level: fluid.c:2605:38: warning: argument 4 of type 'gdouble[9]' {aka 'double[9]'} with mismatched bound [-Warray-parameter=] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from fluid.c:27: fluid.h:240:62: note: previously declared as 'gdouble[8]' {aka 'double[8]'} 240 | gdouble f[4*(FTT_DIMENSION - 1)]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ fluid.c:3067:45: warning: argument 2 of type 'FttDirection[3]' with mismatched bound [-Warray-parameter=] 3067 | FttDirection d[FTT_DIMENSION], | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ fluid.h:280:69: note: previously declared as 'FttDirection *' 280 | FttDirection * d, | ~~~~~~~~~~~~~~~^ In function 'gfs_cell_corner_values', inlined from 'gfs_cell_corner_values' at fluid.c:2602:6: fluid.c:2614:28: warning: array subscript 8 is outside array bounds of 'gdouble[8]' {aka 'double[8]'} [-Warray-bounds=] 2614 | f[4*(FTT_DIMENSION - 1)] = GFS_VALUE (cell, v); fluid.c: In function 'gfs_cell_corner_values': fluid.c:2605:38: note: at offset 64 into object 'f' of size [0, 64] 2605 | gdouble f[4*(FTT_DIMENSION - 1) + 1]) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o unstructured.lo unstructured.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from unstructured.h:24, from unstructured.c:24: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ unstructured.c: In function 'allocate_wallfaces': unstructured.c:437:5: warning: 'gfs_cut_cube_vertices' accessing 288 bytes in a region of size 168 [-Wstringop-overflow=] 437 | gfs_cut_cube_vertices (cell, -1, &s->ca, &normal, nodecutface, d, NULL, NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ unstructured.c:437:5: note: referencing argument 5 of type 'FttVector[12]' {aka 'struct _FttVector[12]'} unstructured.c:437:5: note: referencing argument 6 of type 'FttDirection[12]' unstructured.c:437:5: note: referencing argument 8 of type 'gdouble[12]' {aka 'double[12]'} In file included from unstructured.c:28: graphic.h:137:20: note: in a call to function 'gfs_cut_cube_vertices' 137 | guint gfs_cut_cube_vertices (FttCell * cell, | ^~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o balance.lo balance.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from event.h:27, from balance.h:27, from balance.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o event.lo event.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from event.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ocean.lo ocean.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from ocean.c:24: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ocean.c: In function 'correct_normal_velocity': ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable] 45 | FttFaceType type; | ^~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o map.lo map.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from advection.h:27, from timestep.h:27, from variable.h:29, from map.h:27, from map.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ map.c: In function 'gfs_map_read': map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable] 34 | gboolean class_changed = FALSE; | ^~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o simulation.lo simulation.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from simulation.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ simulation.c: In function 'load_module': simulation.c:214:7: warning: 'g_module_build_path' is deprecated [-Wdeprecated-declarations] 214 | gchar * path = g_module_build_path (GFS_MODULES_DIR, name); | ^~~~~ In file included from simulation.c:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ simulation.c: In function 'error_handler': simulation.c:1780:39: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 1780 | snprintf (fname, 20, "error-%d.gfs", domain->pid); | ^ In file included from /usr/include/stdio.h:964, from /usr/include/gts.h:23, from fluid.h:23, from boundary.h:23, from domain.h:23, from simulation.h:27, from simulation.c:27: In function 'snprintf', inlined from 'error_handler' at simulation.c:1780:5: /usr/include/bits/stdio2.h:54:10: note: '__builtin___snprintf_chk' output between 12 and 21 bytes into a destination of size 20 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o source.lo source.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from source.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o particle.lo particle.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particle.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -o libgfs2D.la -rpath /usr/lib64 libgfs2D_la-ftt.lo libgfs2D_la-fluid.lo libgfs2D_la-variable.lo libgfs2D_la-output.lo libgfs2D_la-solid.lo libgfs2D_la-poisson.lo libgfs2D_la-advection.lo libgfs2D_la-boundary.lo libgfs2D_la-mpi_boundary.lo libgfs2D_la-timestep.lo libgfs2D_la-domain.lo libgfs2D_la-init.lo libgfs2D_la-refine.lo libgfs2D_la-event.lo libgfs2D_la-simulation.lo libgfs2D_la-graphic.lo libgfs2D_la-adaptive.lo libgfs2D_la-source.lo libgfs2D_la-tension.lo libgfs2D_la-vof.lo libgfs2D_la-utils.lo libgfs2D_la-ocean.lo libgfs2D_la-wave.lo libgfs2D_la-levelset.lo libgfs2D_la-cartesian.lo libgfs2D_la-surface.lo libgfs2D_la-unstructured.lo libgfs2D_la-map.lo libgfs2D_la-river.lo libgfs2D_la-moving.lo libgfs2D_la-balance.lo libgfs2D_la-metric.lo libgfs2D_la-particle.lo -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o graphic.lo graphic.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from graphic.c:30: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from graphic.c:42: isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable] 66 | static FttVector cvertex[8] = { | ^~~~~~~ isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable] 52 | static guint connectv[12][2][4] = { | ^~~~~~~~ isocube.h:39:14: warning: 'face_v' defined but not used [-Wunused-variable] 39 | static guint face_v[6][4] = { | ^~~~~~ isocube.h:31:14: warning: 'face' defined but not used [-Wunused-variable] 31 | static guint face[6][4][2] = { | ^~~~ isocube.h:27:18: warning: 'vertex' defined but not used [-Wunused-variable] 27 | static FttVector vertex[8] = { | ^~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gerris2D gerris2D-gerris.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o utils.lo utils.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from utils.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ utils.c: In function 'get_tmp_file': utils.c:57:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 57 | GTimeVal tv; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/gts.h:24, from solid.h:23, from utils.c:36: /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:72:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 72 | g_get_current_time (&tv); | ^~~~~~~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib/giochannel.h:35, from /usr/include/glib-2.0/glib.h:56: /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function 'current_time': utils.c:653:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 653 | GTimeVal r; | ^~~~~~~~ /usr/include/glib-2.0/glib/gtypes.h:580:8: note: declared here 580 | struct _GTimeVal | ^~~~~~~~~ utils.c:654:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations] 654 | g_get_current_time (&r); | ^~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmain.h:728:8: note: declared here 728 | void g_get_current_time (GTimeVal *result); | ^~~~~~~~~~~~~~~~~~ utils.c: In function 'compile': utils.c:699:5: warning: 'g_module_build_path' is deprecated [-Wdeprecated-declarations] 699 | gchar * path = g_module_build_path (GFS_MODULES_DIR, mname); | ^~~~~ In file included from utils.h:28, from boundary.h:24, from domain.h:23, from solid.h:25: /usr/include/glib-2.0/gmodule.h:142:23: note: declared here 142 | gchar* g_module_build_path (const gchar *directory, | ^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o domain.lo domain.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from domain.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from domain.c:1702: ftt_internal.c: In function 'traverse_all_direct_faces': ftt_internal.c:53:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 53 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:51:16: note: 'd' declared here 51 | FttDirection d; | ^ ftt_internal.c:49:67: note: 'datum' declared here 49 | static void traverse_all_direct_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ ftt_internal.c: In function 'traverse_all_faces': ftt_internal.c:43:12: warning: storing the address of local variable 'd' in '*datum' [-Wdangling-pointer=] 43 | datum[0] = &d; | ~~~~~~~~~^~~~ ftt_internal.c:41:16: note: 'd' declared here 41 | FttDirection d; | ^ ftt_internal.c:39:60: note: 'datum' declared here 39 | static void traverse_all_faces (FttCell * cell, gpointer * datum) | ~~~~~~~~~~~^~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o metric.lo metric.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from metric.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable] 241 | static double kpu_2d_l4[17][3] = { | ^~~~~~~~~ metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable] 221 | static double kpu_2d_l2[5][3] = { | ^~~~~~~~~ metric.c: In function 'matrix_a': metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1408 | a += excess_of_quad (&r[i0+i][j0+j].x1, &r[i0+i+1][j0+j].x1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1409 | &r[i0+i+1][j0+j+1].x1, &r[i0+i][j0+j+1].x1); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1408:12: note: referencing argument 1 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 2 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 3 of type 'const double[3]' metric.c:1408:12: warning: 'excess_of_quad' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1408:12: note: referencing argument 4 of type 'const double[3]' metric.c:1034:15: note: in a call to function 'excess_of_quad' 1034 | static double excess_of_quad (const double v1[3], const double v2[3], | ^~~~~~~~~~~~~~ metric.c: In function 'matrix_hy': metric.c:1429:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1429 | hy += angle_between_vectors (&r[i0][j0+j].x1, &r[i0][j0+j+1].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1429:11: note: referencing argument 1 of type 'const double[3]' metric.c:1429:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1429:11: note: referencing argument 2 of type 'const double[3]' metric.c:1018:15: note: in a call to function 'angle_between_vectors' 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ metric.c: In function 'matrix_hx': metric.c:1419:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1419 | hx += angle_between_vectors (&r[i0+i][j0].x1, &r[i0+i+1][j0].x1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1419:11: note: referencing argument 1 of type 'const double[3]' metric.c:1419:11: warning: 'angle_between_vectors' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1419:11: note: referencing argument 2 of type 'const double[3]' metric.c:1018:15: note: in a call to function 'angle_between_vectors' 1018 | static double angle_between_vectors (const double v1[3], const double v2[3]) | ^~~~~~~~~~~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1039:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1039 | plane_normal (v1, v2, plane1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1039:3: note: referencing argument 1 of type 'const double[3]' metric.c:1039:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1039:3: note: referencing argument 2 of type 'const double[3]' metric.c:1039:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1040:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1040 | plane_normal (v2, v3, plane2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1040:3: note: referencing argument 1 of type 'const double[3]' metric.c:1040:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1040:3: note: referencing argument 2 of type 'const double[3]' metric.c:1040:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1041:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1041 | plane_normal (v3, v4, plane3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1041:3: note: referencing argument 1 of type 'const double[3]' metric.c:1041:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1041:3: note: referencing argument 2 of type 'const double[3]' metric.c:1041:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ In function 'excess_of_quad', inlined from 'matrix_a' at metric.c:1408:12: metric.c:1042:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] 1042 | plane_normal (v4, v1, plane4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ metric.c:1042:3: note: referencing argument 1 of type 'const double[3]' metric.c:1042:3: warning: 'plane_normal' reading 24 bytes from a region of size 8 [-Wstringop-overread] metric.c:1042:3: note: referencing argument 2 of type 'const double[3]' metric.c:1042:3: note: referencing argument 3 of type 'double[3]' metric.c: In function 'matrix_a': metric.c:1023:13: note: in a call to function 'plane_normal' 1023 | static void plane_normal (const double p1[3], const double p2[3], double plane[3]) | ^~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o river.lo river.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from river.c:55: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o moving.lo moving.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from moving.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from moving.c:49: moving2.c: In function 'second_order_face_fractions': moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable] 257 | gdouble dt1, dt2, dto1, dto2, s1, s2; | ^~ moving2.c: In function 'old_solid_fractions_from_children': moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 731 | for (i = 0; i < FTT_CELLS; i++) | ^~~ moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 735 | gfs_cell_init_solid_fractions_from_children (cell); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o vof.lo vof.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from vof.c:23: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ vof.c:2682:13: warning: 'curvature_from_h' defined but not used [-Wunused-function] 2682 | static void curvature_from_h (FttCell * cell, GfsDomain * domain, | ^~~~~~~~~~~~~~~~ vof.c:2646:16: warning: 'neighboring_column' defined but not used [-Wunused-function] 2646 | static gdouble neighboring_column (FttCell * cell, | ^~~~~~~~~~~~~~~~~~ vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function] 1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v) | ^~~~~~~~~~ vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function] 850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n) | ^~~~~~~~~~~~~ vof.c: In function 'add_vof_center': vof.c:2443:5: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2443 | parabola_fit_add (fit, &c.x, w*area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2443:5: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'myc_normal': vof.c:897:3: warning: 'mycs' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 897 | mycs (f, &n->x); | ^~~~~~~~~~~~~~~ vof.c:897:3: note: referencing argument 2 of type 'double[3]' In file included from vof.c:889: myc.h:17:13: note: in a call to function 'mycs' 17 | static void mycs(double c[3][3][3],double mxyz[3]) | ^~~~ vof.c: In function 'gfs_fit_curvature': vof.c:2508:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2508 | parabola_fit_add (&fit, &fc.x, area); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2508:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'gfs_height_curvature': vof.c:2627:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2627 | parabola_fit_add (&fit, &fc.x, area*100.); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2627:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ vof.c: In function 'gfs_height_curvature_new': vof.c:2879:3: warning: 'parabola_fit_add' accessing 24 bytes in a region of size 8 [-Wstringop-overflow=] 2879 | parabola_fit_add (&fit, &fc.x, area*100.); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vof.c:2879:3: note: referencing argument 2 of type 'gdouble[3]' {aka 'double[3]'} vof.c:2277:13: note: in a call to function 'parabola_fit_add' 2277 | static void parabola_fit_add (ParabolaFit * p, GtsVector m, gdouble w) | ^~~~~~~~~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -o libgfs3D.la -rpath /usr/lib64 ftt.lo fluid.lo variable.lo output.lo solid.lo poisson.lo advection.lo boundary.lo mpi_boundary.lo timestep.lo domain.lo init.lo refine.lo event.lo simulation.lo graphic.lo adaptive.lo source.lo tension.lo vof.lo utils.lo ocean.lo wave.lo levelset.lo cartesian.lo surface.lo unstructured.lo map.lo river.lo moving.lo balance.lo metric.lo particle.lo -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gerris3D gerris.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' Making all in modules Making all in RStarTree make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' /bin/sh ../../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInOut.lo `test -f 'RSTInOut.c' || echo './'`RSTInOut.c In file included from /usr/include/sys/file.h:21, from RStarTree.h:28, from RSTInOut.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' /bin/sh ../../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInterUtil.lo `test -f 'RSTInterUtil.c' || echo './'`RSTInterUtil.c In file included from /usr/include/sys/file.h:21, from RStarTree.h:28, from RSTInterUtil.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RSTInterUtil.c: In function 'SetCheckDir': RSTInterUtil.c:208:7: warning: variable 'PACKEDSIZE_DIRnofentries' set but not used [-Wunused-but-set-variable] 208 | PACKEDSIZE_DIRnofentries, REALSIZE_DIRnofentries; | ^~~~~~~~~~~~~~~~~~~~~~~~ RSTInterUtil.c:207:7: warning: variable 'PACKEDdirentrylen' set but not used [-Wunused-but-set-variable] 207 | PACKEDdirentrylen, REALdirentrylen, | ^~~~~~~~~~~~~~~~~ RSTInterUtil.c: In function 'SetCheckData': RSTInterUtil.c:350:27: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long unsigned int' [-Wformat=] 350 | fprintf(stderr,"%s %d\n"," Expecting:",sizeof(typinfo)); | ~^ ~~~~~~~~~~~~~~~ | | | | int long unsigned int | %ld make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' /bin/sh ../../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTJoin.lo `test -f 'RSTJoin.c' || echo './'`RSTJoin.c In file included from /usr/include/sys/file.h:21, from RStarTree.h:28, from RSTJoin.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' /bin/sh ../../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RStarTree.lo `test -f 'RStarTree.c' || echo './'`RStarTree.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from RStarTree.c:3: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' /bin/sh ../../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTQuery.lo `test -f 'RSTQuery.c' || echo './'`RSTQuery.c In file included from /usr/include/sys/file.h:21, from RStarTree.h:28, from RSTQuery.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' /bin/sh ../../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTUtil.lo `test -f 'RSTUtil.c' || echo './'`RSTUtil.c In file included from /usr/include/sys/file.h:21, from RStarTree.h:28, from RSTUtil.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RSTUtil.c: In function 'Covers': RSTUtil.c:204:7: warning: variable 'maxdim' set but not used [-Wunused-but-set-variable] 204 | int maxdim; | ^~~~~~ RSTUtil.c: In function 'ChooseSubtree': RSTUtil.c:546:16: warning: variable 'inv' set but not used [-Wunused-but-set-variable] 546 | int maxexam, inv; | ^~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' /bin/sh ../../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInstDel.lo `test -f 'RSTInstDel.c' || echo './'`RSTInstDel.c In file included from /usr/include/sys/file.h:21, from RStarTree.h:28, from RSTInstDel.c:4: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ RSTInstDel.c: In function 'SplitAndDistributData': RSTInstDel.c:848:22: warning: 'validedge' may be used uninitialized [-Wmaybe-uninitialized] 848 | validedge= validedge+edge; | ~~~~~~~~~^~~~~~~~~~~~~~~~ RSTInstDel.c:751:37: note: 'validedge' was declared here 751 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~ RSTInstDel.c:850:16: warning: 'validvalue' may be used uninitialized [-Wmaybe-uninitialized] 850 | if (value < validvalue) { | ^ RSTInstDel.c:753:17: note: 'validvalue' was declared here 753 | value, validvalue, backvalvalue; | ^~~~~~~~~~ RSTInstDel.c:938:24: warning: 'backvaledge' may be used uninitialized [-Wmaybe-uninitialized] 938 | backvaledge= backvaledge+edge; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RSTInstDel.c:751:48: note: 'backvaledge' was declared here 751 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~~~ RSTInstDel.c:940:16: warning: 'backvalvalue' may be used uninitialized [-Wmaybe-uninitialized] 940 | if (value < backvalvalue) { | ^ RSTInstDel.c:753:29: note: 'backvalvalue' was declared here 753 | value, validvalue, backvalvalue; | ^~~~~~~~~~~~ RSTInstDel.c:971:29: warning: 'axsortside' may be used uninitialized [-Wmaybe-uninitialized] 971 | if (axis != (*par).maxdim || axsortside != currsortside) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RSTInstDel.c:744:32: note: 'axsortside' was declared here 744 | Side sortside, currsortside, axsortside; | ^~~~~~~~~~ RSTInstDel.c:971:6: warning: 'axis' may be used uninitialized [-Wmaybe-uninitialized] 971 | if (axis != (*par).maxdim || axsortside != currsortside) { | ^ RSTInstDel.c:745:7: note: 'axis' was declared here 745 | int axis; | ^~~~ RSTInstDel.c:978:16: warning: 'axisindex' may be used uninitialized [-Wmaybe-uninitialized] 978 | for (j= 0; j < (*n).nofentries; j++) { | ~~^~~~~~~~~~~~~~~~~ RSTInstDel.c:748:7: note: 'axisindex' was declared here 748 | axisindex; | ^~~~~~~~~ RSTInstDel.c: In function 'SplitAndDistributDir': RSTInstDel.c:582:22: warning: 'validedge' may be used uninitialized [-Wmaybe-uninitialized] 582 | validedge= validedge+edge; | ~~~~~~~~~^~~~~~~~~~~~~~~~ RSTInstDel.c:485:37: note: 'validedge' was declared here 485 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~ RSTInstDel.c:584:16: warning: 'validvalue' may be used uninitialized [-Wmaybe-uninitialized] 584 | if (value < validvalue) { | ^ RSTInstDel.c:487:17: note: 'validvalue' was declared here 487 | value, validvalue, backvalvalue; | ^~~~~~~~~~ RSTInstDel.c:672:24: warning: 'backvaledge' may be used uninitialized [-Wmaybe-uninitialized] 672 | backvaledge= backvaledge+edge; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ RSTInstDel.c:485:48: note: 'backvaledge' was declared here 485 | leftedge, rightedge, edge, validedge, backvaledge, axisedge, | ^~~~~~~~~~~ RSTInstDel.c:674:16: warning: 'backvalvalue' may be used uninitialized [-Wmaybe-uninitialized] 674 | if (value < backvalvalue) { | ^ RSTInstDel.c:487:29: note: 'backvalvalue' was declared here 487 | value, validvalue, backvalvalue; | ^~~~~~~~~~~~ RSTInstDel.c:705:29: warning: 'axsortside' may be used uninitialized [-Wmaybe-uninitialized] 705 | if (axis != (*par).maxdim || axsortside != currsortside) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RSTInstDel.c:478:32: note: 'axsortside' was declared here 478 | Side sortside, currsortside, axsortside; | ^~~~~~~~~~ RSTInstDel.c:705:6: warning: 'axis' may be used uninitialized [-Wmaybe-uninitialized] 705 | if (axis != (*par).maxdim || axsortside != currsortside) { | ^ RSTInstDel.c:479:7: note: 'axis' was declared here 479 | int axis; | ^~~~ RSTInstDel.c:712:16: warning: 'axisindex' may be used uninitialized [-Wmaybe-uninitialized] 712 | for (j= 0; j < (*n).nofentries; j++) { | ~~^~~~~~~~~~~~~~~~~ RSTInstDel.c:482:7: note: 'axisindex' was declared here 482 | axisindex; | ^~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' /bin/sh ../../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o libcSmRST.la libcSmRST_la-RStarTree.lo libcSmRST_la-RSTInstDel.lo libcSmRST_la-RSTJoin.lo libcSmRST_la-RSTUtil.lo libcSmRST_la-RSTInOut.lo libcSmRST_la-RSTInterUtil.lo libcSmRST_la-RSTQuery.lo make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' Making all in kdt make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdtquery-kdtquery.o `test -f 'kdtquery.c' || echo './'`kdtquery.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from kdtquery.c:21: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o xyz2kdt-xyz2kdt.o `test -f 'xyz2kdt.c' || echo './'`xyz2kdt.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from xyz2kdt.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdt2kdt-kdt2kdt.o `test -f 'kdt2kdt.c' || echo './'`kdt2kdt.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from kdt2kdt.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' /bin/sh ../../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libkdt_la-kdt.lo `test -f 'kdt.c' || echo './'`kdt.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from kdt.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ kdt.c:450:13: warning: 'kdt_rect_write' defined but not used [-Wunused-function] 450 | static void kdt_rect_write (const KdtRect rect, FILE * fp) | ^~~~~~~~~~~~~~ kdt.c:252:13: warning: 'kdt_write' defined but not used [-Wunused-function] 252 | static void kdt_write (KdtHeap * h, FILE * fp) | ^~~~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' /bin/sh ../../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -D_FILE_OFFSET_BITS=64 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o libkdt.la libkdt_la-kdt.lo make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' /bin/sh ../../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o xyz2kdt xyz2kdt-xyz2kdt.o -lkdt -lm make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' /bin/sh ../../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o kdt2kdt kdt2kdt-kdt2kdt.o -lkdt -lm make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' /bin/sh ../../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o kdtquery kdtquery-kdtquery.o -lkdt -lm make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' Making all in fes2004 make[3]: Nothing to be done for 'all'. Making all in wavewatch make[3]: Nothing to be done for 'all'. Making all in culvert make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_inlet-check_inlet.o `test -f 'check_inlet.c' || echo './'`check_inlet.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from check_inlet.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_outlet-check_outlet.o `test -f 'check_outlet.c' || echo './'`check_outlet.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from check_outlet.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o discharge_table-discharge_table.o `test -f 'discharge_table.c' || echo './'`discharge_table.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from discharge_table.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' /bin/sh ../../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I../.. -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libboyd87_la-boyd87.lo `test -f 'boyd87.c' || echo './'`boyd87.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from boyd87.c:9: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' /bin/sh ../../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o libboyd87.la libboyd87_la-boyd87.lo make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' /bin/sh ../../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o discharge_table discharge_table-discharge_table.o -lboyd87 -lm make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' /bin/sh ../../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o check_inlet check_inlet-check_inlet.o -lboyd87 -lm make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' /bin/sh ../../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o check_outlet check_outlet-check_outlet.o -lboyd87 -lm make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface.o `test -f 'rsurface.c' || echo './'`rsurface.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from rsurface.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface2kdt.o `test -f 'rsurface2kdt.c' || echo './'`rsurface2kdt.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rsurface2kdt.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates3D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from particulates.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates2D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/particle.h:27, from particulatecommon.h:20, from particulates.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libdf33D_la-df3.lo `test -f 'df3.c' || echo './'`df3.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from df3.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada3D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from okada.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada2D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from okada.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libculvert2D_la-culvert.lo `test -f 'culvert.c' || echo './'`culvert.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/event.h:27, from ../src/source.h:27, from ../src/river.h:27, from culvert.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o rsurface2kdt rsurface2kdt-rsurface2kdt.o rsurface2kdt-rsurface.o -LRStarTree -lcSmRST -Lkdt -lkdt -lm libtool: warning: '-version-info' is ignored for programs libtool: warning: '-release' is ignored for programs make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libdf33D.la -rpath /usr/lib64/gerris libdf33D_la-df3.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro2D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from electrohydro.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libokada2D.la -rpath /usr/lib64/gerris libokada2D_la-okada.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro3D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from electrohydro.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric2D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from skewsymmetric.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ skewsymmetric.c: In function 'gfs_skew_symmetric_run': skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable] 591 | GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION]; | ^~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric3D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from skewsymmetric.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ skewsymmetric.c: In function 'gfs_skew_symmetric_run': skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable] 591 | GfsVariable * p, * res = NULL, * gmac[FTT_DIMENSION]; | ^~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libokada3D.la -rpath /usr/lib64/gerris libokada3D_la-okada.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon3D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particulatecommon.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libculvert2D.la -rpath /usr/lib64/gerris libculvert2D_la-culvert.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lculvert -lboyd87 -lm make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon2D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from particulatecommon.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In function 'subs_fttvectors', inlined from 'compute_lift_force' at particulatecommon.c:186:28: particulatecommon.c:33:10: warning: 'result.z' may be used uninitialized [-Wmaybe-uninitialized] 33 | return result; | ^~~~~~ particulatecommon.c: In function 'compute_lift_force': particulatecommon.c:29:13: note: 'result' declared here 29 | FttVector result; | ^~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics2D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/solid.h:23, from topics.c:21: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from ../src/timestep.h:29, from ../src/simulation.h:28, from ../src/event.h:53, from ../src/solid.h:26: topics.c: In function 'print_interface': topics.c:1139:38: warning: array subscript 2 is above array bounds of 'GfsVariable *[2]' {aka 'struct _GfsVariable *[2]'} [-Warray-bounds=] 1139 | double nz = GFS_VALUE(cell, tv->m[2]); ../src/variable.h:76:74: note: in definition of macro 'GFS_VALUE' 76 | #define GFS_VALUE(cell,v) ((&GFS_STATE (cell)->place_holder)[(v)->i]) | ^ In file included from topics.c:23: ../src/vof.h:77:17: note: while referencing 'm' 77 | GfsVariable * m[FTT_DIMENSION], * alpha; | ^ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libparticulatecommon3D.la libparticulatecommon3D_la-particulatecommon.lo libtool: warning: '-version-info/-version-number' is ignored for convenience libraries libtool: warning: '-release' is ignored for convenience libraries make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libparticulatecommon2D.la libparticulatecommon2D_la-particulatecommon.lo libtool: warning: '-version-info/-version-number' is ignored for convenience libraries libtool: warning: '-release' is ignored for convenience libraries make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libelectrohydro2D.la -rpath /usr/lib64/gerris libelectrohydro2D_la-electrohydro.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libskewsymmetric2D.la -rpath /usr/lib64/gerris libskewsymmetric2D_la-skewsymmetric.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libskewsymmetric3D.la -rpath /usr/lib64/gerris libskewsymmetric3D_la-skewsymmetric.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libelectrohydro3D.la -rpath /usr/lib64/gerris libelectrohydro3D_la-electrohydro.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o liblayered2D_la-layered.lo `test -f 'layered.c' || echo './'`layered.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/fluid.h:23, from ../src/boundary.h:23, from ../src/domain.h:23, from ../src/simulation.h:27, from layered.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics3D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /usr/include/gts.h:23, from ../src/solid.h:23, from topics.c:21: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libtopics2D.la -rpath /usr/lib64/gerris libtopics2D_la-topics.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libterrain2D_la-terrain.lo `test -f 'terrain.c' || echo './'`terrain.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from terrain.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ terrain.c: In function 'polygon_contains': terrain.c:253:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 253 | if (right (&p->p[0].x, &p->p[1].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:253:7: note: referencing argument 1 of type 'const double[2]' terrain.c:253:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:253:7: note: referencing argument 2 of type 'const double[2]' terrain.c:253:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:255:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 255 | if (right (&p->p[1].x, &p->p[2].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:255:7: note: referencing argument 1 of type 'const double[2]' terrain.c:255:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:255:7: note: referencing argument 2 of type 'const double[2]' terrain.c:255:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:257:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 257 | if (right (&p->p[2].x, &p->p[3].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:257:7: note: referencing argument 1 of type 'const double[2]' terrain.c:257:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:257:7: note: referencing argument 2 of type 'const double[2]' terrain.c:257:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:259:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 259 | if (right (&p->p[3].x, &p->p[0].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:259:7: note: referencing argument 1 of type 'const double[2]' terrain.c:259:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:259:7: note: referencing argument 2 of type 'const double[2]' terrain.c:259:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libparticulates3D.la -rpath /usr/lib64/gerris libparticulates3D_la-particulates.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libparticulates2D.la -rpath /usr/lib64/gerris libparticulates2D_la-particulates.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o liblayered2D.la -rpath /usr/lib64/gerris liblayered2D_la-layered.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libtopics3D.la -rpath /usr/lib64/gerris libtopics3D_la-topics.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=compile x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib64/gerris\" -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o terrain.lo terrain.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from terrain.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ terrain.c: In function 'polygon_contains': terrain.c:253:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 253 | if (right (&p->p[0].x, &p->p[1].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:253:7: note: referencing argument 1 of type 'const double[2]' terrain.c:253:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:253:7: note: referencing argument 2 of type 'const double[2]' terrain.c:253:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:255:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 255 | if (right (&p->p[1].x, &p->p[2].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:255:7: note: referencing argument 1 of type 'const double[2]' terrain.c:255:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:255:7: note: referencing argument 2 of type 'const double[2]' terrain.c:255:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:257:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 257 | if (right (&p->p[2].x, &p->p[3].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:257:7: note: referencing argument 1 of type 'const double[2]' terrain.c:257:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:257:7: note: referencing argument 2 of type 'const double[2]' terrain.c:257:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ terrain.c:259:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] 259 | if (right (&p->p[3].x, &p->p[0].x, q)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ terrain.c:259:7: note: referencing argument 1 of type 'const double[2]' terrain.c:259:7: warning: 'right' reading 16 bytes from a region of size 8 [-Wstringop-overread] terrain.c:259:7: note: referencing argument 2 of type 'const double[2]' terrain.c:259:7: note: referencing argument 3 of type 'const double[2]' terrain.c:246:17: note: in a call to function 'right' 246 | static gboolean right (const double a[2], const double b[2], const double c[2]) | ^~~~~ make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libterrain2D.la -rpath /usr/lib64/gerris libterrain2D_la-terrain.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -o libterrain3D.la -rpath /usr/lib64/gerris terrain.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' Making all in tools make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2.o gfsjoin2.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gfsjoin2.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2D-gfsjoin2.o `test -f 'gfsjoin2.c' || echo './'`gfsjoin2.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from gfsjoin2.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ppmcombine-ppmcombine.o `test -f 'ppmcombine.c' || echo './'`ppmcombine.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ppmcombine.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ ppmcombine.c: In function 'main': ppmcombine.c:36:12: warning: variable 'verbose' set but not used [-Wunused-but-set-variable] 36 | gboolean verbose = FALSE; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o streamanime.o streamanime.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from streamanime.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine.o gfscombine.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscombine.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine2D-gfscombine.o `test -f 'gfscombine.c' || echo './'`gfscombine.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscombine.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gfsjoin3D gfsjoin2.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o shapes.o shapes.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from shapes.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ shapes.c:288:13: warning: 'surface_add_rectangular_channel_shape' defined but not used [-Wunused-function] 288 | static void surface_add_rectangular_channel_shape (GtsSurface * s, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare.o gfscompare.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscompare.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfscompare.c: In function 'main': gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable] 319 | gboolean no_check = FALSE; | ^~~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gfsjoin2D gfsjoin2D-gfsjoin2.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o ppmcombine ppmcombine-ppmcombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare2D-gfscompare.o `test -f 'gfscompare.c' || echo './'`gfscompare.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfscompare.c:1: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfscompare.c: In function 'main': gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable] 319 | gboolean no_check = FALSE; | ^~~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o streamanime streamanime.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gfscombine3D gfscombine.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gfscombine2D gfscombine2D-gfscombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o shapes shapes.o -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gfscompare3D gfscompare.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gfscompare2D gfscompare2D-gfscompare.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl.o gfs2oogl.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfs2oogl.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfs2oogl.c: In function 'main': gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations] 891 | streamname = g_strdup (g_basename (optarg)); | ^~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:50, from /usr/include/gts.h:24, from ../src/init.h:23, from gfs2oogl.c:31: /usr/include/glib-2.0/glib/gfileutils.h:207:14: note: declared here 207 | const gchar *g_basename (const gchar *file_name); | ^~~~~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' x86_64-alt-linux-gcc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl2D-gfs2oogl.o `test -f 'gfs2oogl.c' || echo './'`gfs2oogl.c In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/math.h:27, from gfs2oogl.c:20: /usr/include/features.h:196:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 196 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gfs2oogl.c: In function 'main': gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations] 891 | streamname = g_strdup (g_basename (optarg)); | ^~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:50, from /usr/include/gts.h:24, from ../src/init.h:23, from gfs2oogl.c:31: /usr/include/glib-2.0/glib/gfileutils.h:207:14: note: declared here 207 | const gchar *g_basename (const gchar *file_name); | ^~~~~~~~~~ gfs2oogl.c:706:28: warning: variable 'lines' set but not used [-Wunused-but-set-variable] 706 | gboolean ribbon = FALSE, lines = FALSE, squares = FALSE; | ^~~~~ gfs2oogl.c:706:12: warning: variable 'ribbon' set but not used [-Wunused-but-set-variable] 706 | gboolean ribbon = FALSE, lines = FALSE, squares = FALSE; | ^~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gfs2oogl3D gfs2oogl.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /bin/sh ../libtool --silent --tag=CC --mode=link x86_64-alt-linux-gcc -DFTT_2D=1 -pipe -frecord-gcc-switches -Wall -g -O2 -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -o gfs2oogl2D gfs2oogl2D-gfs2oogl.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' Making all in test make[2]: Nothing to be done for 'all'. Making all in doc make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc' ls ../src/*.[ch] | awk 'BEGIN{print "reference: \\"}{ print "\t" $1 " \\"}' > Makefile.deps make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc' Making all in tutorial make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/tutorial' awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/tutorial' make[3]: Nothing to be done for 'all'. Making all in examples make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' /bin/sh ../../libtool --silent --mode=link x86_64-alt-linux-gcc -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DFTT_2D=1 \ modules.c -o modules ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' /bin/sh ../../libtool --silent --mode=link x86_64-alt-linux-gcc -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DFTT_2D=1 \ classes.c -o classes ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' ./modules ../../modules/*.la /usr/lib64/gerris/*.so | sort | uniq > modules.list make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' (./classes && sh ./modulesyms.sh ../../modules /usr/lib64/gerris) | sort > gerris.dic make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' echo "# Language file for source-highlight" > gfs.lang echo "# Generated automatically by classes.c" >> gfs.lang awk '{ printf ("classname = \"%s\"\n", $1) }' < gerris.dic >> gfs.lang echo "include \"/usr/share/source-highlight/cpp.lang\"" >> gfs.lang echo "comment start \"#\"" >> gfs.lang echo "redef preproc = \"C preprocessor command is not compatible with the use of # as comment character in GTS\"" >> gfs.lang make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' sh gfs.php.sh > gfs.php make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' echo "(defvar gfs-abbrevs '(" > gfs-keywords.el awk '{ printf ("\"%s\"\n", $1) }' < gerris.dic >> gfs-keywords.el echo ")" >> gfs-keywords.el echo "\"Gerris keywords automatically generated by classes.c.\")" >> gfs-keywords.el echo "(defvar gfs-modules '(" >> gfs-keywords.el awk '{ printf ("\"%s\"\n", $1) }' < modules.list >> gfs-keywords.el echo ")" >> gfs-keywords.el echo "\"Gerris modules automatically generated by modules.c.\")" >> gfs-keywords.el echo "(provide 'gfs-keywords)" >> gfs-keywords.el make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make all-am make[4]: Nothing to be done for 'all-am'. Making all in manpages make[3]: Nothing to be done for 'all'. make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc' /bin/sh ../libtool --silent --mode=link x86_64-alt-linux-gcc -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -DFTT_2D=1 \ autoclass.c -o autoclass ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc' Making all in desktop make[2]: Nothing to be done for 'all'. Making all in debian make[2]: Nothing to be done for 'all'. + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.40347 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/gerris-buildroot + : + /bin/rm -rf -- /usr/src/tmp/gerris-buildroot + PATH=/usr/libexec/rpm-build:/usr/src/bin:/usr/bin:/bin:/usr/local/bin:/usr/games + cd gerris-20131206 + make 'INSTALL=/usr/libexec/rpm-build/install -p' install DESTDIR=/usr/src/tmp/gerris-buildroot make: Entering directory '/usr/src/RPM/BUILD/gerris-20131206' Making install in src make[1]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' make install-am make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/src' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/lib64' /bin/sh ../libtool --silent --mode=install /usr/libexec/rpm-build/install -p libgfs2D.la libgfs3D.la '/usr/src/tmp/gerris-buildroot/usr/lib64' libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/bin' /bin/sh ../libtool --silent --mode=install /usr/libexec/rpm-build/install -p gerris2D gerris3D '/usr/src/tmp/gerris-buildroot/usr/bin' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib64' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/include' /usr/libexec/rpm-build/install -p -m 644 gfs.h '/usr/src/tmp/gerris-buildroot/usr/include' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/lib64/pkgconfig' /usr/libexec/rpm-build/install -p -m 644 gerris2D.pc gerris3D.pc '/usr/src/tmp/gerris-buildroot/usr/lib64/pkgconfig' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/share/gerris' /usr/libexec/rpm-build/install -p -m 644 m4.awk '/usr/src/tmp/gerris-buildroot/usr/share/gerris' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/include/gerris' /usr/libexec/rpm-build/install -p -m 644 ftt.h fluid.h variable.h output.h solid.h poisson.h advection.h boundary.h mpi_boundary.h timestep.h domain.h init.h refine.h event.h simulation.h graphic.h adaptive.h source.h tension.h vof.h utils.h ocean.h wave.h levelset.h isocube.h cartesian.h surface.h unstructured.h map.h river.h moving.h balance.h metric.h particle.h version.h spatial.h function.h '/usr/src/tmp/gerris-buildroot/usr/include/gerris' make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' make[1]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/src' Making install in modules make[1]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' Making install in RStarTree make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/RStarTree' Making install in kdt make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/bin' /bin/sh ../../libtool --silent --mode=install /usr/libexec/rpm-build/install -p xyz2kdt kdt2kdt kdtquery '/usr/src/tmp/gerris-buildroot/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/kdt' Making install in fes2004 make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/fes2004' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/fes2004' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/fes2004' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/fes2004' Making install in wavewatch make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/wavewatch' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/wavewatch' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/wavewatch' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/wavewatch' Making install in culvert make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules/culvert' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/modules' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/bin' /bin/sh ../libtool --silent --mode=install /usr/libexec/rpm-build/install -p rsurface2kdt '/usr/src/tmp/gerris-buildroot/usr/bin' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/lib64/gerris' /bin/sh ../libtool --silent --mode=install /usr/libexec/rpm-build/install -p libterrain2D.la libterrain3D.la libparticulates2D.la libparticulates3D.la libokada2D.la libokada3D.la libdf33D.la libelectrohydro2D.la libelectrohydro3D.la libskewsymmetric2D.la libskewsymmetric3D.la libtopics2D.la libtopics3D.la libculvert2D.la liblayered2D.la '/usr/src/tmp/gerris-buildroot/usr/lib64/gerris' libtool: warning: relinking 'libterrain2D.la' libtool: warning: relinking 'libterrain3D.la' libtool: warning: relinking 'libparticulates2D.la' libtool: warning: relinking 'libparticulates3D.la' libtool: warning: relinking 'libokada2D.la' libtool: warning: relinking 'libokada3D.la' libtool: warning: relinking 'libdf33D.la' libtool: warning: relinking 'libelectrohydro2D.la' libtool: warning: relinking 'libelectrohydro3D.la' libtool: warning: relinking 'libskewsymmetric2D.la' libtool: warning: relinking 'libskewsymmetric3D.la' libtool: warning: relinking 'libtopics2D.la' libtool: warning: relinking 'libtopics3D.la' libtool: warning: relinking 'libculvert2D.la' libtool: warning: relinking 'liblayered2D.la' libtool: warning: remember to run 'libtool --finish /usr/lib64/gerris' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' make[1]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/modules' Making install in tools make[1]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/tools' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/bin' /bin/sh ../libtool --silent --mode=install /usr/libexec/rpm-build/install -p gfs2oogl2D gfs2oogl3D streamanime ppmcombine gfscompare2D gfscompare3D gfscombine2D gfscombine3D gfsjoin2D gfsjoin3D shapes '/usr/src/tmp/gerris-buildroot/usr/bin' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib64' libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib64' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/bin' /usr/libexec/rpm-build/install -p darcs2dist bat2gts ppm2mpeg ppm2theora ppm2video gfs2gfs gfsjoin gfsplot '/usr/src/tmp/gerris-buildroot/usr/bin' make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' make[1]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/tools' Making install in test make[1]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/test' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/test' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/test' make[1]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/test' Making install in doc make[1]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc' Making install in tutorial make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/tutorial' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/tutorial' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/tutorial' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/tutorial' Making install in examples make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make install-am make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make[4]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/bin' /usr/libexec/rpm-build/install -p gfs2doc gfs-highlight gfsxref '/usr/src/tmp/gerris-buildroot/usr/bin' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/share/gerris' /usr/libexec/rpm-build/install -p -m 644 gfs2tex.py gfs.lang gerris.dic gfs-keywords.el gfs-mode.el gfs.sty gfs.hva kaltura.sh gfs.php '/usr/src/tmp/gerris-buildroot/usr/share/gerris' make[4]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/examples' Making install in manpages make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/manpages' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc/manpages' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/share/man/man1' /usr/libexec/rpm-build/install -p -m 644 bat2gts.1 gerris2D.1 gerris3D.1 gfs2gfs.1 gfs2oogl2D.1 gfs2oogl3D.1 gfscompare2D.1 gfscompare3D.1 gfs-config.1 gfs-highlight.1 gfsjoin.1 gfsxref.1 ppm2mpeg.1 ppmcombine.1 rsurfacequery.1 rsurfaceinfo.1 shapes.1 streamanime.1 xyz2rsurface.1 gfsjoin2D.1 gfsjoin3D.1 '/usr/src/tmp/gerris-buildroot/usr/share/man/man1' make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/manpages' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc/manpages' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc' make[3]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/doc' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc' make[1]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/doc' Making install in desktop make[1]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/desktop' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/desktop' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/share/icons/hicolor/48x48/mimetypes' /usr/libexec/rpm-build/install -p -m 644 application-gerris.png application-gerris-2D.png application-gerris-3D.png application-gerris-compressed.png '/usr/src/tmp/gerris-buildroot/usr/share/icons/hicolor/48x48/mimetypes' /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/share/mime/packages' /usr/libexec/rpm-build/install -p -m 644 gerris.xml '/usr/src/tmp/gerris-buildroot/usr/share/mime/packages' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/desktop' make[1]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/desktop' Making install in debian make[1]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/debian' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206/debian' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/debian' make[1]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206/debian' make[1]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206' make[2]: Entering directory '/usr/src/RPM/BUILD/gerris-20131206' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/usr/src/tmp/gerris-buildroot/usr/share/gerris' /usr/libexec/rpm-build/install -p build_function libtool '/usr/src/tmp/gerris-buildroot/usr/share/gerris' make[2]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206' make[1]: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206' make: Leaving directory '/usr/src/RPM/BUILD/gerris-20131206' + find /usr/src/tmp/gerris-buildroot/usr/lib64 -type f -name '*.la' -delete -print /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/liblayered2D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libculvert2D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libtopics3D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libtopics2D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libskewsymmetric3D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libskewsymmetric2D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libelectrohydro3D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libelectrohydro2D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libdf33D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libokada3D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libokada2D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libparticulates3D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libparticulates2D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libterrain3D.la /usr/src/tmp/gerris-buildroot/usr/lib64/gerris/libterrain2D.la /usr/src/tmp/gerris-buildroot/usr/lib64/libgfs3D.la /usr/src/tmp/gerris-buildroot/usr/lib64/libgfs2D.la + rm -fv /usr/src/tmp/gerris-buildroot/usr/bin/gfs2doc removed '/usr/src/tmp/gerris-buildroot/usr/bin/gfs2doc' + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/gerris-buildroot (auto) mode of './usr/lib64/gerris/liblayered2D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libculvert2D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libtopics3D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libtopics2D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libskewsymmetric3D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libskewsymmetric2D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libelectrohydro3D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libelectrohydro2D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libdf33D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libokada3D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libokada2D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libparticulates3D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libparticulates2D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libterrain3D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/gerris/libterrain2D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgfs3D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) mode of './usr/lib64/libgfs2D-1.3.so.2.0.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/gerris-buildroot (binconfig,pkgconfig,libtool,desktop,gnuconfig) /usr/lib64/pkgconfig/gerris3D.pc: Cflags: '-I${includedir}' --> '' /usr/lib64/pkgconfig/gerris3D.pc: Libs: '-L${libdir} -lgfs3D -lgts -lm' --> '-lgfs3D -lgts -lm' /usr/lib64/pkgconfig/gerris2D.pc: Cflags: '-I${includedir} -DFTT_2D=1' --> '-DFTT_2D=1' /usr/lib64/pkgconfig/gerris2D.pc: Libs: '-L${libdir} -lgfs2D -lgts -lm' --> '-lgfs2D -lgts -lm' Checking contents of files in /usr/src/tmp/gerris-buildroot/ (default) Compressing files in /usr/src/tmp/gerris-buildroot (auto) removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/streamanime.1' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/streamanime.1.xz' -> 'gerris2D.1.xz' removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/ppm2mpeg.1' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/ppm2mpeg.1.xz' -> 'gerris2D.1.xz' removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gfscompare3D.1' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gfscompare3D.1.xz' -> 'gfscompare2D.1.xz' removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gfs2oogl3D.1' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gfs2oogl3D.1.xz' -> 'gfs2oogl2D.1.xz' removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gerris3D.1' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gerris3D.1.xz' -> 'gerris2D.1.xz' removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gerris3D.1.xz' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gerris3D.1.xz' -> 'gerris2D.1.xz' removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gfs2oogl3D.1.xz' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gfs2oogl3D.1.xz' -> 'gfs2oogl2D.1.xz' removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gfscompare3D.1.xz' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/gfscompare3D.1.xz' -> 'gfscompare2D.1.xz' removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/ppm2mpeg.1.xz' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/ppm2mpeg.1.xz' -> 'gerris2D.1.xz' removed '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/streamanime.1.xz' '/usr/src/tmp/gerris-buildroot/usr/share/man/man1/streamanime.1.xz' -> 'gerris2D.1.xz' Adjusting library links in /usr/src/tmp/gerris-buildroot ./usr/lib64: (from :0) libgfs2D-1.3.so.2 -> libgfs2D-1.3.so.2.0.0 libgfs3D-1.3.so.2 -> libgfs3D-1.3.so.2.0.0 Verifying ELF objects in /usr/src/tmp/gerris-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Splitting links to aliased files under /{,s}bin in /usr/src/tmp/gerris-buildroot Bytecompiling python3 modules in /usr/src/tmp/gerris-buildroot using /usr/bin/python3 Can't list '/usr/src/tmp/gerris-buildroot/usr/lib64/python3/site-packages' Can't list '/usr/src/tmp/gerris-buildroot/usr/lib/python3/site-packages' Bytecompiling python3 modules with optimization in /usr/src/tmp/gerris-buildroot using /usr/bin/python3 -O Can't list '/usr/src/tmp/gerris-buildroot/usr/lib/python3/site-packages' Can't list '/usr/src/tmp/gerris-buildroot/usr/lib64/python3/site-packages' Bytecompiling python3 modules with optimization-2 in /usr/src/tmp/gerris-buildroot using /usr/bin/python3 -OO Can't list '/usr/src/tmp/gerris-buildroot/usr/lib/python3/site-packages' Can't list '/usr/src/tmp/gerris-buildroot/usr/lib64/python3/site-packages' Hardlinking identical .pyc and .opt-?.pyc files Processing files: gerris-20131206-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.7FIIqX find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) lib.prov: /usr/src/tmp/gerris-buildroot/usr/lib64/libgfs2D-1.3.so.2: 582 symbols, 20 bpp lib.prov: /usr/src/tmp/gerris-buildroot/usr/lib64/libgfs3D-1.3.so.2: 590 symbols, 20 bpp python.prov.files: /usr/src/tmp/gerris-buildroot/usr/share/gerris/gfs2tex.py: ASCII Java program text (SKIP) python3.prov.files: /usr/src/tmp/gerris-buildroot/usr/share/gerris/gfs2tex.py: ASCII Java program text (SKIP) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Mww1jk find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) python.req.files: /usr/src/tmp/gerris-buildroot/usr/share/gerris/gfs2tex.py: ASCII Java program text (SKIP) python3.req.files: /usr/src/tmp/gerris-buildroot/usr/share/gerris/gfs2tex.py: ASCII Java program text (SKIP) shell.req: /usr/src/tmp/gerris-buildroot/usr/bin/darcs2dist: darcs not found (skip) shell.req: /usr/src/tmp/gerris-buildroot/usr/share/gerris/libtool: emulate not found (skip) shell.req: /usr/src/tmp/gerris-buildroot/usr/share/gerris/libtool: setopt not found (skip) find-requires: FINDPACKAGE-COMMANDS: awk cat chmod cp darcs diff emulate func_basename func_dirname func_dirname_and_basename func_internal_error gnuplot gunzip gzip happrox head ln ls make mapproject more mv rm sed setopt sftp sh sleep sort source-highlight tail tar touch transform uniq wc Provides: libgfs2D-1.3.so.2()(64bit) = set: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, libgfs3D-1.3.so.2()(64bit) = set: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, pkgconfig(gerris2D) = 1.3.2, pkgconfig(gerris3D) = 1.3.2 Requires: gcc, /bin/bash, /bin/sh, /lib64/ld-linux-x86-64.so.2, /usr/bin/file, /usr/bin/gnuplot, /usr/bin/sftp, /usr/lib64/pkgconfig, GMT, coreutils, diffutils, gawk, glib2-devel, gts, gzip, libc.so.6(GLIBC_2.14)(64bit), libc.so.6(GLIBC_2.2.5)(64bit), libc.so.6(GLIBC_2.27)(64bit), libc.so.6(GLIBC_2.3)(64bit), libc.so.6(GLIBC_2.3.4)(64bit), libc.so.6(GLIBC_2.34)(64bit), libc.so.6(GLIBC_2.38)(64bit), libc.so.6(GLIBC_2.4)(64bit), libglib-2.0.so.0()(64bit) >= set:ohu0tQMZpIgLSAfrwmv3UW8cLVsJHyCDLRfaOAPyvwTEPZt1jcONe6HybDJYiKk2Z5i9HMm2iek8oApp6uEynFH5y2y5slPyYb11B9YgEx9IGl864l6rysvYWuZy5eNlnQk03bwoEkPs43OZEazZmGZu2CMUwA12JruWVxVVc4jrvmpEoO7d56K9tkNBOx6KcxLn1p6P, libgmodule-2.0.so.0()(64bit) >= set:hdJjPgQC8JXn2RQroW2, libgts-0.7.so.5()(64bit) >= set:mfp9KueHjMn9sGnbZ4iZ4lOZrp9lA8be8obJjDhk4VBoIpy2Cu65Gn8mHyl7Xtb8I0mu0J8s0adg64VrEHs3wMPPyAsEKAahvCILZ4UYHsu2MqTFpceZI1bVqaqywYrr2iHSsZJUj4ftVyolxNS3tf7h1Ba0seHpqy0XT2ylwXDZCv8TwppNvPlk8B411gRjvA01ZfUKfIwpOK4cIHNPPG18SHR9zM3H8MCsCGkcFfRzbQXECyD6XOMqC8mZgIH8icdWaEMUkdWXP5SVlXhLYFPtCc0, libgts-devel, libm.so.6(GLIBC_2.2.5)(64bit), libm.so.6(GLIBC_2.29)(64bit), make, pkgconfig(gts) >= 0.7.3, rtld(GNU_HASH), sed, sh, source-highlight, tar, util-linux Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.DwDzlo Creating gerris-debuginfo package Processing files: gerris-debuginfo-20131206-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.blxb2j find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.MP4we8 find-requires: running scripts (debuginfo) Provides: debug64(libgfs2D-1.3.so.2), debug64(libgfs3D-1.3.so.2) Requires: gerris = 20131206-alt1, /usr/lib/debug/lib64/ld-linux-x86-64.so.2.debug, debug64(libc.so.6), debug64(libglib-2.0.so.0), debug64(libgmodule-2.0.so.0), debug64(libgts-0.7.so.5), debug64(libm.so.6) Adding to gerris-debuginfo a strict dependency on gerris Wrote: /usr/src/RPM/RPMS/x86_64/gerris-20131206-alt1.x86_64.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/x86_64/gerris-debuginfo-20131206-alt1.x86_64.rpm (w2.lzdio) 80.85user 51.83system 0:49.20elapsed 269%CPU (0avgtext+0avgdata 89220maxresident)k 0inputs+0outputs (0major+8194424minor)pagefaults 0swaps 3.50user 2.89system 1:01.00elapsed 10%CPU (0avgtext+0avgdata 131508maxresident)k 40inputs+0outputs (0major+227477minor)pagefaults 0swaps --- gerris-20131206-alt1.x86_64.rpm.repo 2024-04-10 06:20:54.000000000 +0000 +++ gerris-20131206-alt1.x86_64.rpm.hasher 2024-05-04 03:56:47.886229956 +0000 @@ -204,19 +204,19 @@ File: /usr/bin/darcs2dist 100755 root:root 12b092cf0dc6759b2a2f23a0780e18e0 -File: /usr/bin/gerris2D 100755 root:root d5e3e05b2f554a7df60024dcb73cd276 -File: /usr/bin/gerris3D 100755 root:root 2c45af1d86c0907709a74abf858c5386 +File: /usr/bin/gerris2D 100755 root:root e41a16d7c84d3237410d835418f83cf8 +File: /usr/bin/gerris3D 100755 root:root 2d4cacaffe5b4e43c3c4319fc762c199 File: /usr/bin/gfs-highlight 100755 root:root 3dd35a2f7bb58929a1a0f46bbfd9f811 File: /usr/bin/gfs2gfs 100755 root:root f498782b3b96743e8488aefce6ddceb7 -File: /usr/bin/gfs2oogl2D 100755 root:root 01780b408dfe1fea9c01803d38bbcadf -File: /usr/bin/gfs2oogl3D 100755 root:root 07ae3f23d35b428faf215668794677f2 -File: /usr/bin/gfscombine2D 100755 root:root cfa152fd02a447f87b5b4762ffc737d9 -File: /usr/bin/gfscombine3D 100755 root:root d039aec99dbb277309a56cb0584b829e -File: /usr/bin/gfscompare2D 100755 root:root e3a9a814718fba99eaf3c6fd66deff21 -File: /usr/bin/gfscompare3D 100755 root:root c2812e61a0f3941973b4a82688fcec11 +File: /usr/bin/gfs2oogl2D 100755 root:root c4b4f07dd0b3fed5bc24e12b89f04bce +File: /usr/bin/gfs2oogl3D 100755 root:root 9c8077f478ee09fb662f7c1422a64bfe +File: /usr/bin/gfscombine2D 100755 root:root 9a13b7d51c4518b3f2d99309756c0f90 +File: /usr/bin/gfscombine3D 100755 root:root 804e1b937a52d8b24d72de535dbde5a5 +File: /usr/bin/gfscompare2D 100755 root:root ce245c86da0cf75f57483ab1d60abce7 +File: /usr/bin/gfscompare3D 100755 root:root 9176333d1cad4e7ccb515dad200dd267 File: /usr/bin/gfsjoin 100755 root:root c9a3958fbc5e67c30352b0560c038ca0 -File: /usr/bin/gfsjoin2D 100755 root:root 8f63fad82acc9d70d9ae704de90f2053 -File: /usr/bin/gfsjoin3D 100755 root:root 492390b3ea40c15182643bc9c9600888 +File: /usr/bin/gfsjoin2D 100755 root:root eafb356c81fa917ebe709ca2e770f7c2 +File: /usr/bin/gfsjoin3D 100755 root:root b2ebbb236f9d356539d86e932de71de8 File: /usr/bin/gfsplot 100755 root:root 49de74cb8e6dbfdc0c7b59c480b4ce03 File: /usr/bin/gfsxref 100755 root:root 2d77546d85a3c9338c560b5147577df4 -File: /usr/bin/kdt2kdt 100755 root:root 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gerris-debuginfo-20131206-alt1.x86_64.rpm.repo 2024-04-10 06:20:54.000000000 +0000 +++ gerris-debuginfo-20131206-alt1.x86_64.rpm.hasher 2024-05-04 03:56:48.119233094 +0000 @@ -8,11 +8,11 @@ /usr/lib/debug/.build-id/01/a3d1bb7c5fb784e40bbb8b6f5c8cf3824fa2ff.debug 120777 root:root ../../usr/lib64/gerris/liblayered2D-1.3.so.2.0.0.debug -/usr/lib/debug/.build-id/1c 40755 root:root -/usr/lib/debug/.build-id/1c/9ac187d971c4a1c2f0cd40db79fea6bbdd08a4 120777 root:root ../../../../bin/gerris2D -/usr/lib/debug/.build-id/1c/9ac187d971c4a1c2f0cd40db79fea6bbdd08a4.debug 120777 root:root ../../usr/bin/gerris2D.debug -/usr/lib/debug/.build-id/1e 40755 root:root -/usr/lib/debug/.build-id/1e/2b509c9c8d6696c5103522e144c2a7f8e08eff 120777 root:root ../../../../bin/gfsjoin3D -/usr/lib/debug/.build-id/1e/2b509c9c8d6696c5103522e144c2a7f8e08eff.debug 120777 root:root ../../usr/bin/gfsjoin3D.debug -/usr/lib/debug/.build-id/21 40755 root:root -/usr/lib/debug/.build-id/21/3e15509d0ed9f94ca490fdd54744391a8ff31e 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../../usr/bin/ppmcombine.debug /usr/lib/debug/.build-id/2b 40755 root:root @@ -20,5 +20,2 @@ /usr/lib/debug/.build-id/2b/31c1844f66dd5ec13d5d1cd53efb8e3eba282d.debug 120777 root:root ../../usr/lib64/gerris/libelectrohydro2D-1.3.so.2.0.0.debug -/usr/lib/debug/.build-id/31 40755 root:root -/usr/lib/debug/.build-id/31/90f82b96b90f664dc908096c15dc6dc0522d2e 120777 root:root ../../../../bin/gfscompare2D -/usr/lib/debug/.build-id/31/90f82b96b90f664dc908096c15dc6dc0522d2e.debug 120777 root:root ../../usr/bin/gfscompare2D.debug /usr/lib/debug/.build-id/32 40755 root:root @@ -26,5 +23,2 @@ /usr/lib/debug/.build-id/32/f21de2b19f40515dd99f4b1d351c22ef29a067.debug 120777 root:root ../../usr/lib64/libgfs2D-1.3.so.2.0.0.debug -/usr/lib/debug/.build-id/34 40755 root:root -/usr/lib/debug/.build-id/34/7274820bf852f01e6961231f52e758cd6ee5a0 120777 root:root ../../../../bin/gfsjoin2D -/usr/lib/debug/.build-id/34/7274820bf852f01e6961231f52e758cd6ee5a0.debug 120777 root:root ../../usr/bin/gfsjoin2D.debug /usr/lib/debug/.build-id/38 40755 root:root @@ -38,5 +32,8 @@ /usr/lib/debug/.build-id/54/4522d0e55d55c4713a924a9f185f878213cab0.debug 120777 root:root ../../usr/lib64/gerris/libterrain2D-1.3.so.2.0.0.debug -/usr/lib/debug/.build-id/5a 40755 root:root -/usr/lib/debug/.build-id/5a/76a37bc0681970a58aba46702ac706027f8be4 120777 root:root ../../../../bin/gfscombine3D -/usr/lib/debug/.build-id/5a/76a37bc0681970a58aba46702ac706027f8be4.debug 120777 root:root ../../usr/bin/gfscombine3D.debug +/usr/lib/debug/.build-id/5c 40755 root:root +/usr/lib/debug/.build-id/5c/96938dff61d3a7ee45cd552638dabdb7a5abcc 120777 root:root ../../../../bin/gfscompare2D +/usr/lib/debug/.build-id/5c/96938dff61d3a7ee45cd552638dabdb7a5abcc.debug 120777 root:root ../../usr/bin/gfscompare2D.debug +/usr/lib/debug/.build-id/60 40755 root:root +/usr/lib/debug/.build-id/60/9313bedde1ac6c039256d3c316b94204b68503 120777 root:root ../../../../bin/gfs2oogl3D +/usr/lib/debug/.build-id/60/9313bedde1ac6c039256d3c316b94204b68503.debug 120777 root:root ../../usr/bin/gfs2oogl3D.debug /usr/lib/debug/.build-id/64 40755 root:root @@ -47,5 +44,2 @@ /usr/lib/debug/.build-id/65/e82635ca669a4607f101db1ff060985a04bbcc.debug 120777 root:root ../../usr/lib64/gerris/libparticulates2D-1.3.so.2.0.0.debug -/usr/lib/debug/.build-id/68 40755 root:root -/usr/lib/debug/.build-id/68/877ec77f5b642d5101312211f24bb425bebd17 120777 root:root ../../../../bin/gerris3D -/usr/lib/debug/.build-id/68/877ec77f5b642d5101312211f24bb425bebd17.debug 120777 root:root ../../usr/bin/gerris3D.debug /usr/lib/debug/.build-id/75 40755 root:root @@ -54,2 +48,4 @@ /usr/lib/debug/.build-id/77 40755 root:root +/usr/lib/debug/.build-id/77/71291cede5ca2a0297c5cee9bce1f97441f323 120777 root:root ../../../../bin/gfsjoin2D +/usr/lib/debug/.build-id/77/71291cede5ca2a0297c5cee9bce1f97441f323.debug 120777 root:root ../../usr/bin/gfsjoin2D.debug 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