<86>Jul 13 12:41:17 userdel[2798175]: delete user 'rooter' <86>Jul 13 12:41:17 userdel[2798175]: removed group 'rooter' owned by 'rooter' <86>Jul 13 12:41:17 userdel[2798175]: removed shadow group 'rooter' owned by 'rooter' <86>Jul 13 12:41:17 groupadd[2798185]: group added to /etc/group: name=rooter, GID=645 <86>Jul 13 12:41:17 groupadd[2798185]: group added to /etc/gshadow: name=rooter <86>Jul 13 12:41:17 groupadd[2798185]: new group: name=rooter, GID=645 <86>Jul 13 12:41:17 useradd[2798190]: new user: name=rooter, UID=645, GID=645, home=/root, shell=/bin/bash <86>Jul 13 12:41:17 userdel[2798200]: delete user 'builder' <86>Jul 13 12:41:17 userdel[2798200]: removed group 'builder' owned by 'builder' <86>Jul 13 12:41:17 userdel[2798200]: removed shadow group 'builder' owned by 'builder' <86>Jul 13 12:41:17 groupadd[2798205]: group added to /etc/group: name=builder, GID=646 <86>Jul 13 12:41:17 groupadd[2798205]: group added to /etc/gshadow: name=builder <86>Jul 13 12:41:17 groupadd[2798205]: new group: name=builder, GID=646 <86>Jul 13 12:41:17 useradd[2798212]: new user: name=builder, UID=646, GID=646, home=/usr/src, shell=/bin/bash <13>Jul 13 12:41:24 rpmi: libjpeg-2:2.0.6-alt3 sisyphus+276287.100.3.1 1625270467 installed <13>Jul 13 12:41:24 rpmi: libpng16-1.6.37-alt1 sisyphus+275734.100.2.1 1624788812 installed <13>Jul 13 12:41:24 rpmi: libexpat-2.2.10-alt1 sisyphus+276608.100.1.2 1625153360 installed <13>Jul 13 12:41:24 rpmi: libobjc4-10.3.1-alt2 sisyphus+277353.100.2.1 1625526466 installed <13>Jul 13 12:41:24 rpmi: libobjc10-devel-10.3.1-alt2 sisyphus+277353.100.2.1 1625526466 installed <13>Jul 13 12:41:24 rpmi: libwebp7-1.2.0-alt2 sisyphus+273452.100.1.1 1622693700 installed <13>Jul 13 12:41:24 rpmi: libogg-1.3.5-alt1 sisyphus+278100.3400.1.1 1626059695 installed <13>Jul 13 12:41:25 rpmi: libicu69-1:6.9.1-alt2 sisyphus+277632.100.1.1 1625726231 installed <13>Jul 13 12:41:25 rpmi: libidn2-2.3.1-alt1 sisyphus+272590.100.1.1 1622036905 installed <13>Jul 13 12:41:25 rpmi: libjasper-2.0.32-alt1 sisyphus+273921.100.2.2 1623101622 installed <13>Jul 13 12:41:25 rpmi: liblcms2-2.12-alt1 sisyphus+265911.100.2.1 1613037796 installed <13>Jul 13 12:41:25 rpmi: libgomp1-10.3.1-alt2 sisyphus+277353.100.2.1 1625526466 installed <13>Jul 13 12:41:25 rpmi: libltdl7-2.4.6-alt3 sisyphus+269178.2000.13.1 1618328602 installed <13>Jul 13 12:41:25 rpmi: libopenjpeg2.0-2.4.0-alt2 sisyphus+270166.100.1.1 1618663540 installed <13>Jul 13 12:41:25 rpmi: libjbig-2.1-alt1 sisyphus+276068.100.1.1 1624815406 installed <13>Jul 13 12:41:25 rpmi: libtiff5-4.2.0-alt1 sisyphus+266365.100.2.1 1613478695 installed <13>Jul 13 12:41:25 rpmi: libICE-1.0.10-alt1 sisyphus+247690.100.1.1 1584000387 installed <13>Jul 13 12:41:25 rpmi: libfribidi-1.0.10-alt1 sisyphus+277991.100.1.1 1625932304 installed <13>Jul 13 12:41:25 rpmi: libglvnd-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed <13>Jul 13 12:41:25 rpmi: libwayland-server-1.19.0-alt1 sisyphus+265427.100.1.1 1611852858 installed <13>Jul 13 12:41:25 rpmi: ilmbase25-common-2.5.6-alt2 sisyphus+274105.100.1.1 1623235203 installed <13>Jul 13 12:41:25 rpmi: libiex25-2.5.6-alt2 sisyphus+274105.100.1.1 1623235203 installed <13>Jul 13 12:41:25 rpmi: libgpg-error-1.42-alt1 sisyphus+275524.40.1.1 1624455836 installed <13>Jul 13 12:41:25 rpmi: libgcrypt20-1.9.3-alt1 sisyphus+275524.100.1.1 1624456196 installed <13>Jul 13 12:41:25 rpmi: libxslt-1.1.34-alt3 sisyphus+275636.100.1.1 1624616871 installed <13>Jul 13 12:41:25 rpmi: libnettle8-3.7.3-alt1 sisyphus+276723.100.1.2 1625211849 installed <13>Jul 13 12:41:26 rpmi: libp11-kit-0.23.15-alt2 sisyphus+252784.100.2.2 1591274901 installed <13>Jul 13 12:41:26 rpmi: libtasn1-4.17.0-alt1 sisyphus+276722.100.1.1 1625211286 installed <13>Jul 13 12:41:26 rpmi: libaspell-0.60.8-alt1 sisyphus+277639.100.1.1 1625728076 installed <13>Jul 13 12:41:26 rpmi: aspell-0.60.8-alt1 sisyphus+277639.100.1.1 1625728076 installed <13>Jul 13 12:41:26 rpmi: libhogweed6-3.7.3-alt1 sisyphus+276723.100.1.2 1625211849 installed <13>Jul 13 12:41:26 rpmi: libgnutls30-3.6.16-alt1 sisyphus+273086.100.1.1 1622478374 installed <13>Jul 13 12:41:26 rpmi: libgnustep-base-1:1.28.0-alt2 sisyphus+274273.100.7.1 1623413713 installed <13>Jul 13 12:41:26 rpmi: libgnutls-devel-3.6.16-alt1 sisyphus+273086.100.1.1 1622478374 installed <13>Jul 13 12:41:26 rpmi: libgpg-error-devel-1.42-alt1 sisyphus+275524.40.1.1 1624455836 installed <13>Jul 13 12:41:26 rpmi: libilmthread25-2.5.6-alt2 sisyphus+274105.100.1.1 1623235203 installed <13>Jul 13 12:41:26 rpmi: libimath25-2.5.6-alt2 sisyphus+274105.100.1.1 1623235203 installed <13>Jul 13 12:41:26 rpmi: libhalf25-2.5.6-alt2 sisyphus+274105.100.1.1 1623235203 installed <13>Jul 13 12:41:26 rpmi: libSM-1.2.3-alt1 sisyphus+226734.100.2.1 1554586158 installed <13>Jul 13 12:41:26 rpmi: libraw-0.20.2-alt1 sisyphus+277232.100.1.1 1625418075 installed <13>Jul 13 12:41:26 rpmi: libicns-0.7.1-alt1.2 sisyphus+223351.100.1.1 1551468904 installed <13>Jul 13 12:41:26 rpmi: icu-utils-1:6.9.1-alt2 sisyphus+277632.100.1.1 1625726231 installed <13>Jul 13 12:41:26 rpmi: libflac8-1.3.3.0.79.37d1-alt2 sisyphus+278100.1400.1.1 1626058888 installed <13>Jul 13 12:41:26 rpmi: libvorbis-1.3.7-alt1 sisyphus+275738.100.1.1 1624751609 installed <13>Jul 13 12:41:27 rpmi: gcc10-objc-10.3.1-alt2 sisyphus+277353.100.2.1 1625526466 installed <13>Jul 13 12:41:27 rpmi: gcc-objc-10-alt1 sisyphus+263054.200.3.1 1607517515 installed <13>Jul 13 12:41:27 rpmi: libflif-0.3-alt3 sisyphus+276388.100.1.1 1624990825 installed <13>Jul 13 12:41:27 rpmi: libxml2-devel-1:2.9.12-alt1 sisyphus+275606.100.1.1 1624544813 installed <13>Jul 13 12:41:27 rpmi: libgif-4.1.6-alt3 sisyphus+276911.100.1.3 1625273983 installed <13>Jul 13 12:41:27 rpmi: libImageMagick6-common-6.9.12.13-alt1 sisyphus+274516.6100.1.1 1623615683 installed <13>Jul 13 12:41:27 rpmi: libwmflite-0.2.8.4-alt13 sisyphus+275127.100.1.1 1624406848 installed <13>Jul 13 12:41:27 rpmi: liblqr-0.4.2-alt1 sisyphus+276247.100.1.2 1624927462 installed <13>Jul 13 12:41:27 rpmi: libgts-0.7.6-alt2.drc20130205.1 sisyphus+275722.100.1.1 1624749871 installed <13>Jul 13 12:41:27 rpmi: libpaper-1.1.28-alt1 sisyphus+259176.100.1.1 1601738993 installed <13>Jul 13 12:41:27 rpmi: icon-theme-hicolor-0.17-alt2 sisyphus+248343.100.1.1 1584979043 installed <13>Jul 13 12:41:27 rpmi: libgtk+2-locales-2.24.33-alt1 sisyphus+263711.100.20.1 1609407991 installed <13>Jul 13 12:41:27 rpmi: libnuma-2.0.14-alt2 sisyphus+262152.100.1.1 1605821057 installed <13>Jul 13 12:41:27 rpmi: libx265-199-3.5-alt1.1 sisyphus+277560.100.1.1 1625696944 installed <13>Jul 13 12:41:27 rpmi: libgdk-pixbuf-locales-2.42.6-alt1 sisyphus+277964.100.1.1 1625927113 installed <13>Jul 13 12:41:27 rpmi: libde265-1.0.7-alt1 sisyphus+275350.100.1.2 1624489763 installed <13>Jul 13 12:41:27 rpmi: libaom3-3.1.1-alt1 sisyphus+274902.100.1.1 1624288873 installed <13>Jul 13 12:41:27 rpmi: libatk-locales-2.36.0-alt1 sisyphus+275092.100.2.1 1624560096 installed <13>Jul 13 12:41:27 rpmi: libatk-2.36.0-alt1 sisyphus+275092.100.2.1 1624560101 installed <13>Jul 13 12:41:27 rpmi: libdatrie-0.2.9-alt1_6 sisyphus+278217.100.1.1 1626078473 installed <13>Jul 13 12:41:27 rpmi: libthai-0.1.28-alt1_1 sisyphus+275403.100.1.2 1624502531 installed <13>Jul 13 12:41:28 rpmi: shared-mime-info-2.1-alt1 sisyphus+264261.100.1.1 1609507723 installed <13>Jul 13 12:41:28 rpmi: gsettings-desktop-schemas-data-40.0-alt1 sisyphus+268501.300.4.2 1617041783 installed <13>Jul 13 12:41:28 rpmi: libgio-2.68.3-alt1 sisyphus+278158.100.1.1 1626049671 installed <13>Jul 13 12:41:28 rpmi: gsettings-desktop-schemas-40.0-alt1 sisyphus+268501.300.4.2 1617041559 installed <13>Jul 13 12:41:28 rpmi: libgdk-pixbuf-2.42.6-alt1 sisyphus+277964.100.1.1 1625927159 installed <13>Jul 13 12:41:28 rpmi: libheif-1.11.0-alt1 sisyphus+271016.300.2.1 1619786418 installed <13>Jul 13 12:41:28 rpmi: gtk-update-icon-cache-3.24.30-alt1 sisyphus+277720.100.1.1 1625768759 installed <13>Jul 13 12:41:28 rpmi: libpixman-3:0.40.0-alt1 sisyphus+250700.100.1.1 1587971055 installed <13>Jul 13 12:41:28 rpmi: libgraphite2-1.3.14-alt2.1 sisyphus+271676.700.1.1 1622384689 installed <13>Jul 13 12:41:28 rpmi: libxshmfence-1.3-alt1 sisyphus+278248.100.1.1 1626080763 installed <13>Jul 13 12:41:28 rpmi: libwayland-client-1.19.0-alt1 sisyphus+265427.100.1.1 1611852858 installed <13>Jul 13 12:41:28 rpmi: libpciaccess-1:0.16-alt1 sisyphus+278288.100.1.1 1626084208 installed <13>Jul 13 12:41:28 rpmi: libdrm-1:2.4.106-alt1 sisyphus+272066.100.1.1 1621322230 installed <13>Jul 13 12:41:28 rpmi: libgbm-4:21.1.4-alt1 sisyphus+276543.100.1.1 1625124748 installed <13>Jul 13 12:41:28 rpmi: libX11-locales-3:1.7.2-alt1 sisyphus+273971.100.1.1 1623132019 installed <13>Jul 13 12:41:28 rpmi: openexr25-common-2.5.6-alt3 sisyphus+277625.100.1.1 1625722238 installed <13>Jul 13 12:41:28 rpmi: libilmimf25-2.5.6-alt3 sisyphus+277625.100.1.1 1625722238 installed <13>Jul 13 12:41:28 rpmi: libXdmcp-1.1.3-alt1 sisyphus+225206.600.1.2 1552949353 installed <13>Jul 13 12:41:28 rpmi: libXau-1.0.9-alt1 sisyphus+278247.100.1.1 1626080738 installed <13>Jul 13 12:41:28 rpmi: libxcb-1.14-alt1 sisyphus+277968.100.1.3 1625952333 installed <13>Jul 13 12:41:28 rpmi: libX11-3:1.7.2-alt1 sisyphus+273971.100.1.1 1623132050 installed <13>Jul 13 12:41:28 rpmi: libXext-1.3.4-alt1 sisyphus+225206.700.1.2 1552949429 installed <13>Jul 13 12:41:28 rpmi: libXrender-0.9.10-alt1 sisyphus+261890.100.1.1 1605595177 installed <13>Jul 13 12:41:28 rpmi: libXfixes-5.0.3-alt1 sisyphus+275326.100.2.2 1624573639 installed <13>Jul 13 12:41:28 rpmi: libXcursor-1.2.0-alt1 sisyphus+278256.100.1.2 1626134584 installed <13>Jul 13 12:41:28 rpmi: libXrandr-1.5.2-alt1 sisyphus+275330.100.2.2 1624575560 installed <13>Jul 13 12:41:28 rpmi: libXxf86vm-1.1.4-alt2 sisyphus+275334.100.2.2 1624577012 installed <13>Jul 13 12:41:28 rpmi: libGLX-mesa-4:21.1.4-alt1 sisyphus+276543.100.1.1 1625124748 installed <13>Jul 13 12:41:28 rpmi: libEGL-mesa-4:21.1.4-alt1 sisyphus+276543.100.1.1 1625124748 installed <13>Jul 13 12:41:28 rpmi: libEGL-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed <13>Jul 13 12:41:28 rpmi: libGLX-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed <13>Jul 13 12:41:28 rpmi: libGL-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed <13>Jul 13 12:41:28 rpmi: libXi-1.7.10-alt1 sisyphus+278284.100.1.2 1626151193 installed <13>Jul 13 12:41:28 rpmi: libXinerama-1.1.4-alt1 sisyphus+275328.100.2.2 1624575558 installed <13>Jul 13 12:41:28 rpmi: libXt-1.2.1-alt1 sisyphus+265202.200.1.1 1611565459 installed <13>Jul 13 12:41:28 rpmi: libXpm-3.5.13-alt1 sisyphus+247690.300.1.1 1584000526 installed <13>Jul 13 12:41:28 rpmi: libXcomposite-0.4.5-alt1 sisyphus+275323.100.2.2 1624573270 installed <13>Jul 13 12:41:28 rpmi: libXdamage-1.1.5-alt1 sisyphus+275324.100.2.2 1624573270 installed <13>Jul 13 12:41:28 rpmi: libopus-1.3.1-alt3 sisyphus+278010.100.1.2 1625975602 installed <13>Jul 13 12:41:28 rpmi: libgsm-1.0.17-alt1 sisyphus+275359.100.2.1 1624907612 installed <13>Jul 13 12:41:28 rpmi: libsndfile-1.0.31-alt1 sisyphus+272065.100.1.1 1621321760 installed <13>Jul 13 12:41:28 rpmi: liblz4-1:1.9.3-alt1 sisyphus+278100.4000.1.1 1626060252 installed <13>Jul 13 12:41:28 rpmi: libsystemd-1:249-alt1 sisyphus+277787.200.2.1 1625952282 installed <13>Jul 13 12:41:28 rpmi: libdbus-1.12.18-alt1 sisyphus+275285.100.2.2 1624573331 installed <13>Jul 13 12:41:28 rpmi: libavahi-0.8-alt2 sisyphus+270871.100.1.1 1619610383 installed <13>Jul 13 12:41:28 rpmi: libcups-2.3.3-alt6.op2 sisyphus+274028.100.1.1 1623149062 installed <13>Jul 13 12:41:28 rpmi: libasyncns-0.8-alt2.qa1 sisyphus+275091.100.1.1 1624402242 installed <13>Jul 13 12:41:28 rpmi: libpulseaudio-14.2-alt5 sisyphus+275541.100.1.1 1624460821 installed <13>Jul 13 12:41:28 rpmi: libgdbm-1.8.3-alt10 sisyphus+278100.1600.1.1 1626059138 installed <13>Jul 13 12:41:28 rpmi: publicsuffix-list-dafsa-20210419-alt1 sisyphus+270358.100.1.1 1618924010 installed <13>Jul 13 12:41:28 rpmi: libpsl-0.21.1-alt2 sisyphus+271468.100.1.1 1620753491 installed <13>Jul 13 12:41:28 rpmi: libnghttp2-1.41.0-alt1 sisyphus+275115.100.1.1 1624405485 installed <13>Jul 13 12:41:28 rpmi: openldap-common-2.4.57-alt1 sisyphus+274516.200.1.1 1623612493 installed <13>Jul 13 12:41:28 rpmi: libverto-0.3.2-alt1_1 sisyphus+268398.100.1.1 1616717462 installed <13>Jul 13 12:41:28 rpmi: liblmdb-0.9.23-alt1 sisyphus+275369.100.1.2 1624493869 installed <13>Jul 13 12:41:28 rpmi: libkeyutils-1.6.3-alt1 sisyphus+266061.100.1.1 1612919567 installed <13>Jul 13 12:41:28 rpmi: libcom_err-1.46.2.0.16.f114-alt1 sisyphus+278100.1000.1.1 1626056819 installed <13>Jul 13 12:41:28 rpmi: libbrotlicommon-1.0.9-alt2 sisyphus+257777.100.1.1 1599688017 installed <13>Jul 13 12:41:28 rpmi: libbrotlidec-1.0.9-alt2 sisyphus+257777.100.1.1 1599688017 installed <13>Jul 13 12:41:28 rpmi: libharfbuzz-2.8.1-alt1 sisyphus+274089.200.2.1 1623239904 installed <13>Jul 13 12:41:28 rpmi: libfreetype-2.10.4-alt2 sisyphus+278003.100.1.2 1625973065 installed <13>Jul 13 12:41:28 rpmi: fontconfig-2.13.1-alt1 sisyphus+257555.100.1.1 1599475160 installed Updating fonts cache: <29>Jul 13 12:41:29 fontconfig: Updating fonts cache: succeeded [ DONE ] <13>Jul 13 12:41:30 rpmi: libcairo-1:1.16.0-alt1 sisyphus+275343.100.2.3 1624578031 installed <13>Jul 13 12:41:30 rpmi: libcairo-gobject-1:1.16.0-alt1 sisyphus+275343.100.2.3 1624578031 installed <13>Jul 13 12:41:30 rpmi: libXft-2.3.3-alt1 sisyphus+278258.100.1.2 1626135738 installed <13>Jul 13 12:41:30 rpmi: libpango-1.48.5-alt1 sisyphus+272129.100.1.1 1621411753 installed <13>Jul 13 12:41:30 rpmi: librsvg-1:2.50.7-alt1 sisyphus+273652.100.1.1 1622875474 installed <13>Jul 13 12:41:30 rpmi: liblasi-1.1.3-alt2 sisyphus+275244.100.1.2 1624454882 installed <13>Jul 13 12:41:31 rpmi: libgtk+2-2.24.33-alt1 sisyphus+263711.100.20.1 1609408077 installed <13>Jul 13 12:41:31 rpmi: libgd3-2.3.2-alt1 sisyphus+267489.100.1.1 1615277758 installed <13>Jul 13 12:41:32 rpmi: libgs-9.53.3-alt1 sisyphus+275064.100.1.3 1624407950 installed <13>Jul 13 12:41:33 rpmi: libgraphviz-2.41.2-alt5 sisyphus+274516.5000.1.1 1623615034 installed <13>Jul 13 12:41:33 rpmi: libraqm-0.7.1-alt1 sisyphus+269031.100.1.1 1617702239 installed <13>Jul 13 12:41:33 rpmi: gnustep-dirs-1.0-alt2 1355065931 installed <13>Jul 13 12:41:33 rpmi: gdb-common-10.1-alt1 sisyphus+265234.500.49.1 1613741942 installed <13>Jul 13 12:41:33 rpmi: djvu-common-3.5.27-alt1 sisyphus+275289.100.1.2 1624473687 installed <13>Jul 13 12:41:33 rpmi: libdjvu-3.5.27-alt1 sisyphus+275289.100.1.2 1624473704 installed <13>Jul 13 12:41:33 rpmi: libImageMagick6.7-6.9.12.13-alt1 sisyphus+274516.6100.1.1 1623615683 installed <13>Jul 13 12:41:33 rpmi: libgnustep-gui-0.29.0-alt2 sisyphus+274273.120.7.1 1623414075 installed <13>Jul 13 12:41:33 rpmi: debuginfod-urls-0.185-alt1 sisyphus+272356.100.1.1 1621721075 installed <13>Jul 13 12:41:33 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+278157.100.2.1 1626055790 installed <13>Jul 13 12:41:33 rpmi: alternatives-0.5.1-alt1 sisyphus+278157.100.2.1 1626055790 installed <13>Jul 13 12:41:33 rpmi: ca-certificates-2021.06.03-alt1 sisyphus+273509.400.1.1 1622736045 installed <13>Jul 13 12:41:33 rpmi: ca-trust-0.1.2-alt1 sisyphus+233348.100.1.1 1561653823 installed <13>Jul 13 12:41:33 rpmi: p11-kit-trust-0.23.15-alt2 sisyphus+252784.100.2.2 1591274901 installed <13>Jul 13 12:41:34 rpmi: libcrypto1.1-1.1.1k-alt1 sisyphus+268375.100.1.1 1616684255 installed <13>Jul 13 12:41:34 rpmi: libssl1.1-1.1.1k-alt1 sisyphus+268375.100.1.1 1616684255 installed <13>Jul 13 12:41:34 rpmi: python3-3.9.6-alt1 sisyphus+276295.100.1.1 1624964545 installed <13>Jul 13 12:41:34 rpmi: python3-base-3.9.6-alt1 sisyphus+276295.100.1.1 1624964545 installed <13>Jul 13 12:41:34 rpmi: libpython3-3.9.6-alt1 sisyphus+276295.100.1.1 1624964545 installed <86>Jul 13 12:41:35 groupadd[2822915]: group added to /etc/group: name=_keytab, GID=499 <86>Jul 13 12:41:35 groupadd[2822915]: group added to /etc/gshadow: name=_keytab <86>Jul 13 12:41:35 groupadd[2822915]: new group: name=_keytab, GID=499 <13>Jul 13 12:41:35 rpmi: libkrb5-1.19.1-alt2 sisyphus+267847.100.1.1 1615814853 installed <86>Jul 13 12:41:35 groupadd[2823401]: group added to /etc/group: name=sasl, GID=498 <86>Jul 13 12:41:35 groupadd[2823401]: group added to /etc/gshadow: name=sasl <86>Jul 13 12:41:35 groupadd[2823401]: new group: name=sasl, GID=498 <13>Jul 13 12:41:35 rpmi: libsasl2-3-2.1.27-alt2.1 sisyphus+255909.100.2.1 1597199456 installed <13>Jul 13 12:41:35 rpmi: libldap-2.4.57-alt1 sisyphus+274516.200.1.1 1623612412 installed <13>Jul 13 12:41:35 rpmi: libcurl-7.77.0-alt1 sisyphus+272616.100.1.1 1622105648 installed <13>Jul 13 12:41:35 rpmi: libdebuginfod-0.185-alt1 sisyphus+272356.100.1.1 1621721042 installed <13>Jul 13 12:41:35 rpmi: gdb-10.1-alt1 sisyphus+265234.500.49.1 1613742587 installed <13>Jul 13 12:41:35 rpmi: gnustep-make-2.8.0-alt2 sisyphus+263758.100.1.1 1608599754 installed <13>Jul 13 12:41:35 rpmi: gnustep-base-1:1.28.0-alt2 sisyphus+274273.100.7.1 1623413713 installed <13>Jul 13 12:41:36 rpmi: gnustep-base-devel-1:1.28.0-alt2 sisyphus+274273.100.7.1 1623413713 installed <13>Jul 13 12:41:36 rpmi: alsa-ucm-conf-1.2.5.1-alt1 sisyphus+274777.200.1.1 1624089157 installed <13>Jul 13 12:41:36 rpmi: alsa-topology-conf-1.2.5.1-alt1 sisyphus+274777.100.1.1 1624089141 installed <13>Jul 13 12:41:36 rpmi: libalsa-1:1.2.5.1-alt1 sisyphus+274777.300.1.1 1624089220 installed <13>Jul 13 12:41:37 rpmi: flite-2.1-alt1 sisyphus+275720.100.1.1 1624749657 installed <13>Jul 13 12:41:37 rpmi: libao-1:1.2.2-alt5 sisyphus+262333.200.4.1 1607258946 installed <13>Jul 13 12:41:37 rpmi: gnustep-gui-0.29.0-alt2 sisyphus+274273.120.7.1 1623414075 installed <13>Jul 13 12:41:37 rpmi: gnustep-gui-devel-0.29.0-alt2 sisyphus+274273.120.7.1 1623414075 installed <13>Jul 13 12:41:37 rpmi: gnustep-make-devel-2.8.0-alt2 sisyphus+263758.100.1.1 1608599754 installed <13>Jul 13 12:41:37 rpmi: libxslt-devel-1.1.34-alt3 sisyphus+275636.100.1.1 1624616871 installed <13>Jul 13 12:41:37 rpmi: libicu-devel-1:6.9.1-alt2 sisyphus+277632.100.1.1 1625726231 installed <13>Jul 13 12:41:37 rpmi: libgcrypt-devel-1.9.3-alt1 sisyphus+275524.100.1.1 1624456196 installed <13>Jul 13 12:41:37 rpmi: zlib-devel-1.2.11-alt1 sisyphus+278099.4700.1.1 1626032672 installed <13>Jul 13 12:41:37 rpmi: libgmp-devel-6.2.1-alt1 sisyphus+278099.1400.1.1 1626029072 installed <13>Jul 13 12:41:37 rpmi: libffi-devel-1:3.3-alt1 sisyphus+278158.300.1.1 1626050399 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/gnustep-BioCocoa-2.2.2-alt4.nosrc.rpm (w1.gzdio) Installing gnustep-BioCocoa-2.2.2-alt4.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.47660 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf gnustep-BioCocoa-2.2.2 + echo 'Source #0 (gnustep-BioCocoa-2.2.2.tar):' Source #0 (gnustep-BioCocoa-2.2.2.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/gnustep-BioCocoa-2.2.2.tar + cd gnustep-BioCocoa-2.2.2 + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #1 (link-libs.patch):' Patch #1 (link-libs.patch): + /usr/bin/patch -p2 patching file GNUmakefile + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.47660 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd gnustep-BioCocoa-2.2.2 + . /usr/share/GNUstep/Makefiles/GNUstep.sh ++ '[' -n '' ']' ++ GNUSTEP_MAKE_STRICT_V2_MODE=yes ++ '[' -z '' ']' ++ GNUSTEP_CONFIG_FILE=/etc/GNUstep/GNUstep.conf ++ '[' -z '' ']' ++ GNUSTEP_USER_CONFIG_FILE=.GNUstep.conf ++ '[' -f /etc/GNUstep/GNUstep.conf ']' ++ . /etc/GNUstep/GNUstep.conf +++ GNUSTEP_USER_CONFIG_FILE=.GNUstep.conf +++ GNUSTEP_USER_DEFAULTS_DIR=GNUstep/Defaults +++ GNUSTEP_MAKEFILES=/usr/share/GNUstep/Makefiles +++ GNUSTEP_SYSTEM_USERS_DIR=/home +++ GNUSTEP_NETWORK_USERS_DIR=/home +++ GNUSTEP_LOCAL_USERS_DIR=/home +++ GNUSTEP_SYSTEM_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_SYSTEM_ADMIN_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_SYSTEM_WEB_APPS=/usr/lib/GNUstep/WebApplications +++ GNUSTEP_SYSTEM_TOOLS=/usr/bin +++ GNUSTEP_SYSTEM_ADMIN_TOOLS=/usr/sbin +++ GNUSTEP_SYSTEM_LIBRARY=/usr/lib/GNUstep +++ GNUSTEP_SYSTEM_HEADERS=/usr/include +++ GNUSTEP_SYSTEM_LIBRARIES=/usr/lib +++ GNUSTEP_SYSTEM_DOC=/usr/share/doc/GNUstep +++ GNUSTEP_SYSTEM_DOC_MAN=/usr/share/man +++ GNUSTEP_SYSTEM_DOC_INFO=/usr/share/info +++ GNUSTEP_NETWORK_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_NETWORK_ADMIN_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_NETWORK_WEB_APPS=/usr/lib/GNUstep/WebApplications +++ GNUSTEP_NETWORK_TOOLS=/usr/bin +++ GNUSTEP_NETWORK_ADMIN_TOOLS=/usr/sbin +++ GNUSTEP_NETWORK_LIBRARY=/usr/lib/GNUstep +++ GNUSTEP_NETWORK_HEADERS=/usr/include +++ GNUSTEP_NETWORK_LIBRARIES=/usr/lib +++ GNUSTEP_NETWORK_DOC=/usr/share/doc/GNUstep +++ GNUSTEP_NETWORK_DOC_MAN=/usr/share/man +++ GNUSTEP_NETWORK_DOC_INFO=/usr/share/info +++ GNUSTEP_LOCAL_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_LOCAL_ADMIN_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_LOCAL_WEB_APPS=/usr/lib/GNUstep/WebApplications +++ GNUSTEP_LOCAL_TOOLS=/usr/bin +++ GNUSTEP_LOCAL_ADMIN_TOOLS=/usr/sbin +++ GNUSTEP_LOCAL_LIBRARY=/usr/lib/GNUstep +++ GNUSTEP_LOCAL_HEADERS=/usr/include +++ GNUSTEP_LOCAL_LIBRARIES=/usr/lib +++ GNUSTEP_LOCAL_DOC=/usr/share/doc/GNUstep +++ GNUSTEP_LOCAL_DOC_MAN=/usr/share/man +++ GNUSTEP_LOCAL_DOC_INFO=/usr/share/info +++ GNUSTEP_USER_DIR_APPS=GNUstep/Applications +++ GNUSTEP_USER_DIR_ADMIN_APPS=GNUstep/Applications/Admin +++ GNUSTEP_USER_DIR_WEB_APPS=GNUstep/WebApplications +++ GNUSTEP_USER_DIR_TOOLS=GNUstep/Tools +++ GNUSTEP_USER_DIR_ADMIN_TOOLS=GNUstep/Tools/Admin +++ GNUSTEP_USER_DIR_LIBRARY=GNUstep +++ GNUSTEP_USER_DIR_HEADERS=GNUstep/Headers +++ GNUSTEP_USER_DIR_LIBRARIES=GNUstep/Libraries +++ GNUSTEP_USER_DIR_DOC=GNUstep/Documentation +++ GNUSTEP_USER_DIR_DOC_MAN=GNUstep/Documentation/man +++ GNUSTEP_USER_DIR_DOC_INFO=GNUstep/Documentation/info ++ GNUSTEP_HOME=/usr/src ++ '[' -n .GNUstep.conf ']' ++ case "$GNUSTEP_USER_CONFIG_FILE" in ++ '[' -f /usr/src/.GNUstep.conf ']' ++ '[' yes = yes ']' ++ unset GNUSTEP_SYSTEM_ROOT ++ unset GNUSTEP_LOCAL_ROOT ++ unset GNUSTEP_NETWORK_ROOT ++ '[' yes = yes ']' ++ unset GNUSTEP_FLATTENED ++ GNUSTEP_IS_FLATTENED=yes ++ '[' -z '' ']' ++ LIBRARY_COMBO=gnu-gnu-gnu ++ '[' '!' yes = yes ']' ++ GNUSTEP_HAS_PKGCONFIG=yes ++ '[' -z /usr/share/GNUstep/Makefiles ']' ++ export GNUSTEP_MAKEFILES ++ '[' yes = yes ']' ++ unset GNUSTEP_USER_DIR ++ unset GNUSTEP_USER_ROOT ++ '[' -z '' ']' ++ GNUSTEP_HOST= ++ GNUSTEP_HOST_CPU= ++ GNUSTEP_HOST_VENDOR=alt ++ GNUSTEP_HOST_OS=linux-gnu ++ '[' -z '' ']' +++ pwd ++ tmpdir=/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2 ++ cd /tmp +++ /usr/share/GNUstep/Makefiles/config.guess ++ GNUSTEP_HOST=i686-pc-linux-gnu +++ /usr/share/GNUstep/Makefiles/config.sub i686-pc-linux-gnu ++ GNUSTEP_HOST=i686-pc-linux-gnu ++ cd /usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2 ++ unset tmpdir ++ '[' -z '' ']' +++ /usr/share/GNUstep/Makefiles/cpu.sh i686-pc-linux-gnu ++ GNUSTEP_HOST_CPU=i686 +++ /usr/share/GNUstep/Makefiles/clean_cpu.sh i686 ++ GNUSTEP_HOST_CPU=ix86 ++ '[' -z alt ']' ++ '[' -z linux-gnu ']' ++ '[' '!' yes = yes ']' ++ . /usr/share/GNUstep/Makefiles/filesystem.sh +++ '[' -z /home ']' +++ '[' -z /home ']' +++ '[' -z /home ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/WebApplications ']' +++ '[' -z /usr/bin ']' +++ '[' -z /usr/sbin ']' +++ '[' -z /usr/lib/GNUstep ']' +++ '[' -z /usr/include ']' +++ '[' -z /usr/lib ']' +++ '[' -z /usr/share/doc/GNUstep ']' +++ '[' -z /usr/share/man ']' +++ '[' -z /usr/share/info ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/WebApplications ']' +++ '[' -z /usr/bin ']' +++ '[' -z /usr/sbin ']' +++ '[' -z /usr/lib/GNUstep ']' +++ '[' -z /usr/include ']' +++ '[' -z /usr/lib ']' +++ '[' -z /usr/share/doc/GNUstep ']' +++ '[' -z /usr/share/man ']' +++ '[' -z /usr/share/info ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/WebApplications ']' +++ '[' -z /usr/bin ']' +++ '[' -z /usr/sbin ']' +++ '[' -z /usr/lib/GNUstep ']' +++ '[' -z /usr/include ']' +++ '[' -z /usr/lib ']' +++ '[' -z /usr/share/doc/GNUstep ']' +++ '[' -z /usr/share/man ']' +++ '[' -z /usr/share/info ']' +++ '[' -z GNUstep/Applications ']' +++ '[' -z GNUstep/Applications/Admin ']' +++ '[' -z GNUstep/WebApplications ']' +++ '[' -z GNUstep/Tools ']' +++ '[' -z GNUstep/Tools/Admin ']' +++ '[' -z GNUstep ']' +++ '[' -z GNUstep/Headers ']' +++ '[' -z GNUstep/Libraries ']' +++ '[' -z GNUstep/Documentation ']' +++ '[' -z GNUstep/Documentation/man ']' +++ '[' -z GNUstep/Documentation/info ']' +++ case "${GNUSTEP_USER_DIR_APPS} ${GNUSTEP_USER_DIR_ADMIN_APPS} ${GNUSTEP_USER_DIR_WEB_APPS} ${GNUSTEP_USER_DIR_TOOLS} ${GNUSTEP_USER_DIR_ADMIN_TOOLS} ${GNUSTEP_USER_DIR_LIBRARY} ${GNUSTEP_USER_DIR_HEADERS} ${GNUSTEP_USER_DIR_LIBRARIES} ${GNUSTEP_USER_DIR_DOC} ${GNUSTEP_USER_DIR_DOC_MAN} ${GNUSTEP_USER_DIR_DOC_INFO}" in +++ case "${GNUSTEP_USER_DIR_APPS} ${GNUSTEP_USER_DIR_ADMIN_APPS} ${GNUSTEP_USER_DIR_WEB_APPS} ${GNUSTEP_USER_DIR_TOOLS} ${GNUSTEP_USER_DIR_ADMIN_TOOLS} ${GNUSTEP_USER_DIR_LIBRARY} ${GNUSTEP_USER_DIR_HEADERS} ${GNUSTEP_USER_DIR_LIBRARIES} ${GNUSTEP_USER_DIR_DOC} ${GNUSTEP_USER_DIR_DOC_MAN} ${GNUSTEP_USER_DIR_DOC_INFO}" in +++ case "${GNUSTEP_USER_DIR_APPS} ${GNUSTEP_USER_DIR_ADMIN_APPS} ${GNUSTEP_USER_DIR_WEB_APPS} ${GNUSTEP_USER_DIR_TOOLS} ${GNUSTEP_USER_DIR_ADMIN_TOOLS} ${GNUSTEP_USER_DIR_LIBRARY} ${GNUSTEP_USER_DIR_HEADERS} ${GNUSTEP_USER_DIR_LIBRARIES} ${GNUSTEP_USER_DIR_DOC} ${GNUSTEP_USER_DIR_DOC_MAN} ${GNUSTEP_USER_DIR_DOC_INFO}" in +++ case "$GNUSTEP_USER_DIR_APPS" in +++ GNUSTEP_USER_APPS=/usr/src/GNUstep/Applications +++ unset GNUSTEP_USER_DIR_APPS +++ case "$GNUSTEP_USER_DIR_ADMIN_APPS" in +++ GNUSTEP_USER_ADMIN_APPS=/usr/src/GNUstep/Applications/Admin +++ unset GNUSTEP_USER_DIR_ADMIN_APPS +++ case "$GNUSTEP_USER_DIR_WEB_APPS" in +++ GNUSTEP_USER_WEB_APPS=/usr/src/GNUstep/WebApplications +++ unset GNUSTEP_USER_DIR_WEB_APPS +++ case "$GNUSTEP_USER_DIR_TOOLS" in +++ GNUSTEP_USER_TOOLS=/usr/src/GNUstep/Tools +++ unset GNUSTEP_USER_DIR_TOOLS +++ case "$GNUSTEP_USER_DIR_ADMIN_TOOLS" in +++ GNUSTEP_USER_ADMIN_TOOLS=/usr/src/GNUstep/Tools/Admin +++ unset GNUSTEP_USER_DIR_ADMIN_TOOLS +++ case "$GNUSTEP_USER_DIR_LIBRARY" in +++ GNUSTEP_USER_LIBRARY=/usr/src/GNUstep +++ unset GNUSTEP_USER_DIR_LIBRARY +++ case "$GNUSTEP_USER_DIR_HEADERS" in +++ GNUSTEP_USER_HEADERS=/usr/src/GNUstep/Headers +++ unset GNUSTEP_USER_DIR_HEADERS +++ case "$GNUSTEP_USER_DIR_LIBRARIES" in +++ GNUSTEP_USER_LIBRARIES=/usr/src/GNUstep/Libraries +++ unset GNUSTEP_USER_DIR_LIBRARIES +++ case "$GNUSTEP_USER_DIR_DOC" in +++ GNUSTEP_USER_DOC=/usr/src/GNUstep/Documentation +++ unset GNUSTEP_USER_DIR_DOC +++ case "$GNUSTEP_USER_DIR_DOC_MAN" in +++ GNUSTEP_USER_DOC_MAN=/usr/src/GNUstep/Documentation/man +++ unset GNUSTEP_USER_DIR_DOC_MAN +++ case "$GNUSTEP_USER_DIR_DOC_INFO" in +++ GNUSTEP_USER_DOC_INFO=/usr/src/GNUstep/Documentation/info +++ unset GNUSTEP_USER_DIR_DOC_INFO ++ unset GNUSTEP_HOME ++ fixup_paths=no +++ echo /usr/share/GNUstep/Makefiles +++ sed 's|^[a-zA-Z]:/.*$||' ++ path_check=/usr/share/GNUstep/Makefiles ++ '[' -z /usr/share/GNUstep/Makefiles ']' ++ unset path_check ++ '[' yes = yes ']' ++ unset GNUSTEP_PATHLIST +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep/Tools /usr/bin /usr/bin /usr/bin no ++ GNUSTEP_TOOLS_PATHLIST=/usr/bin:/usr/src/GNUstep/Tools ++ for dir in "$GNUSTEP_SYSTEM_ADMIN_TOOLS" "$GNUSTEP_NETWORK_ADMIN_TOOLS" "$GNUSTEP_LOCAL_ADMIN_TOOLS" "$GNUSTEP_USER_ADMIN_TOOLS" ++ '[' -d /usr/sbin -a -w /usr/sbin ']' ++ for dir in "$GNUSTEP_SYSTEM_ADMIN_TOOLS" "$GNUSTEP_NETWORK_ADMIN_TOOLS" "$GNUSTEP_LOCAL_ADMIN_TOOLS" "$GNUSTEP_USER_ADMIN_TOOLS" ++ '[' -d /usr/sbin -a -w /usr/sbin ']' ++ for dir in "$GNUSTEP_SYSTEM_ADMIN_TOOLS" "$GNUSTEP_NETWORK_ADMIN_TOOLS" "$GNUSTEP_LOCAL_ADMIN_TOOLS" "$GNUSTEP_USER_ADMIN_TOOLS" ++ '[' -d /usr/sbin -a -w /usr/sbin ']' ++ for dir in "$GNUSTEP_SYSTEM_ADMIN_TOOLS" "$GNUSTEP_NETWORK_ADMIN_TOOLS" "$GNUSTEP_LOCAL_ADMIN_TOOLS" "$GNUSTEP_USER_ADMIN_TOOLS" ++ '[' -d /usr/src/GNUstep/Tools/Admin -a -w /usr/src/GNUstep/Tools/Admin ']' ++ old_IFS=' ' ++ IFS=: ++ for dir in $GNUSTEP_TOOLS_PATHLIST ++ '[' yes = no ']' ++ path_fragment=/usr/bin ++ '[' -z /usr/src/GNUstep/Tools:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ']' ++ grep -v :/usr/bin: ++ echo :/usr/src/GNUstep/Tools:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games: ++ for dir in $GNUSTEP_TOOLS_PATHLIST ++ '[' yes = no ']' ++ path_fragment=/usr/src/GNUstep/Tools ++ '[' -z /usr/src/GNUstep/Tools:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ']' ++ grep -v :/usr/src/GNUstep/Tools: ++ echo :/usr/src/GNUstep/Tools:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games: ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset path_fragment ++ unset GNUSTEP_TOOLS_PATHLIST ++ export PATH +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep/Libraries /usr/lib /usr/lib /usr/lib no ++ GNUSTEP_LIBRARIES_PATHLIST=/usr/lib:/usr/src/GNUstep/Libraries ++ old_IFS=' ' ++ IFS=: ++ for dir in $GNUSTEP_LIBRARIES_PATHLIST ++ '[' yes = yes ']' ++ path_fragment=/usr/lib ++ case "$GNUSTEP_HOST_OS" in ++ '[' -z /usr/src/GNUstep/Libraries:/usr/lib ']' ++ grep -v :/usr/lib: ++ echo :/usr/src/GNUstep/Libraries:/usr/lib: ++ export LD_LIBRARY_PATH ++ for dir in $GNUSTEP_LIBRARIES_PATHLIST ++ '[' yes = yes ']' ++ path_fragment=/usr/src/GNUstep/Libraries ++ case "$GNUSTEP_HOST_OS" in ++ '[' -z /usr/src/GNUstep/Libraries:/usr/lib ']' ++ echo :/usr/src/GNUstep/Libraries:/usr/lib: ++ grep -v :/usr/src/GNUstep/Libraries: ++ export LD_LIBRARY_PATH ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset path_fragment ++ unset GNUSTEP_LIBRARIES_PATHLIST ++ case "$GNUSTEP_HOST_OS" in +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep /usr/lib/GNUstep /usr/lib/GNUstep /usr/lib/GNUstep no ++ GNUSTEP_LIBRARY_PATHLIST=/usr/lib/GNUstep:/usr/src/GNUstep ++ old_IFS=' ' ++ IFS=: ++ for dir in $GNUSTEP_LIBRARY_PATHLIST ++ path_fragment=/usr/lib/GNUstep/Libraries/Java ++ '[' -z /usr/src/GNUstep/Libraries/Java:/usr/lib/GNUstep/Libraries/Java ']' ++ echo :/usr/src/GNUstep/Libraries/Java:/usr/lib/GNUstep/Libraries/Java: ++ grep -v :/usr/lib/GNUstep/Libraries/Java: ++ path_fragment=/usr/lib/GNUstep/Libraries/Guile ++ '[' -z /usr/src/GNUstep/Libraries/Guile:/usr/lib/GNUstep/Libraries/Guile ']' ++ grep -v :/usr/lib/GNUstep/Libraries/Guile: ++ echo :/usr/src/GNUstep/Libraries/Guile:/usr/lib/GNUstep/Libraries/Guile: ++ for dir in $GNUSTEP_LIBRARY_PATHLIST ++ path_fragment=/usr/src/GNUstep/Libraries/Java ++ '[' -z /usr/src/GNUstep/Libraries/Java:/usr/lib/GNUstep/Libraries/Java ']' ++ echo :/usr/src/GNUstep/Libraries/Java:/usr/lib/GNUstep/Libraries/Java: ++ grep -v :/usr/src/GNUstep/Libraries/Java: ++ path_fragment=/usr/src/GNUstep/Libraries/Guile ++ '[' -z /usr/src/GNUstep/Libraries/Guile:/usr/lib/GNUstep/Libraries/Guile ']' ++ echo :/usr/src/GNUstep/Libraries/Guile:/usr/lib/GNUstep/Libraries/Guile: ++ grep -v :/usr/src/GNUstep/Libraries/Guile: ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset path_fragment ++ unset GNUSTEP_LIBRARY_PATHLIST ++ export CLASSPATH ++ export GUILE_LOAD_PATH +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep/Documentation/info /usr/share/info /usr/share/info /usr/share/info no ++ GNUSTEP_INFO_PATHLIST=/usr/share/info:/usr/src/GNUstep/Documentation/info ++ old_IFS=' ' ++ IFS=: ++ for dir in $GNUSTEP_INFO_PATHLIST ++ '[' -z /usr/share/info::/usr/src/GNUstep/Documentation/info: ']' ++ echo :/usr/share/info::/usr/src/GNUstep/Documentation/info:: ++ grep -v :/usr/share/info: ++ for dir in $GNUSTEP_INFO_PATHLIST ++ '[' -z /usr/share/info::/usr/src/GNUstep/Documentation/info: ']' ++ echo :/usr/share/info::/usr/src/GNUstep/Documentation/info:: ++ grep -v :/usr/src/GNUstep/Documentation/info: ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset GNUSTEP_INFO_PATHLIST ++ export INFOPATH ++ '[' yes = yes ']' +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep/Libraries /usr/lib /usr/lib /usr/lib no ++ GNUSTEP_PKGCONFIG_PATHLIST=/usr/lib:/usr/src/GNUstep/Libraries ++ old_IFS=' ' ++ IFS=: ++ GNUSTEP_PKGCONFIG_FRAGMENT=pkgconfig ++ for dir in $GNUSTEP_PKGCONFIG_PATHLIST ++ '[' yes = yes ']' ++ path_fragment=/usr/lib/pkgconfig ++ '[' -z /usr/src/GNUstep/Libraries/pkgconfig:/usr/lib/pkgconfig ']' ++ echo :/usr/src/GNUstep/Libraries/pkgconfig:/usr/lib/pkgconfig: ++ grep -v :/usr/lib/pkgconfig: ++ export PKG_CONFIG_PATH ++ for dir in $GNUSTEP_PKGCONFIG_PATHLIST ++ '[' yes = yes ']' ++ path_fragment=/usr/src/GNUstep/Libraries/pkgconfig ++ '[' -z /usr/src/GNUstep/Libraries/pkgconfig:/usr/lib/pkgconfig ']' ++ grep -v :/usr/src/GNUstep/Libraries/pkgconfig: ++ echo :/usr/src/GNUstep/Libraries/pkgconfig:/usr/lib/pkgconfig: ++ export PKG_CONFIG_PATH ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset path_fragment ++ unset GNUSTEP_PKGCONFIG_FRAGMENT ++ unset GNUSTEP_PKGCONFIG_PATHLIST ++ unset GNUSTEP_HAS_PKGCONFIG ++ '[' -n '' ']' ++ '[' yes = yes ']' ++ unset GNUSTEP_IS_FLATTENED ++ unset LIBRARY_COMBO ++ unset GNUSTEP_HOST ++ unset GNUSTEP_HOST_CPU ++ unset GNUSTEP_HOST_VENDOR ++ unset GNUSTEP_HOST_OS ++ unset GNUSTEP_MAKE_STRICT_V2_MODE ++ '[' -z '' ']' ++ unset GNUSTEP_CONFIG_FILE ++ unset GNUSTEP_KEEP_CONFIG_FILE ++ '[' -z '' ']' ++ unset GNUSTEP_USER_CONFIG_FILE ++ unset GNUSTEP_KEEP_USER_CONFIG_FILE ++ unset GNUSTEP_USER_DEFAULTS_DIR ++ unset GNUSTEP_SYSTEM_APPS ++ unset GNUSTEP_SYSTEM_ADMIN_APPS ++ unset GNUSTEP_SYSTEM_WEB_APPS ++ unset GNUSTEP_SYSTEM_TOOLS ++ unset GNUSTEP_SYSTEM_ADMIN_TOOLS ++ unset GNUSTEP_SYSTEM_LIBRARY ++ unset GNUSTEP_SYSTEM_HEADERS ++ unset GNUSTEP_SYSTEM_LIBRARIES ++ unset GNUSTEP_SYSTEM_DOC ++ unset GNUSTEP_SYSTEM_DOC_MAN ++ unset GNUSTEP_SYSTEM_DOC_INFO ++ unset GNUSTEP_NETWORK_APPS ++ unset GNUSTEP_NETWORK_ADMIN_APPS ++ unset GNUSTEP_NETWORK_WEB_APPS ++ unset GNUSTEP_NETWORK_TOOLS ++ unset GNUSTEP_NETWORK_ADMIN_TOOLS ++ unset GNUSTEP_NETWORK_LIBRARY ++ unset GNUSTEP_NETWORK_HEADERS ++ unset GNUSTEP_NETWORK_LIBRARIES ++ unset GNUSTEP_NETWORK_DOC ++ unset GNUSTEP_NETWORK_DOC_MAN ++ unset GNUSTEP_NETWORK_DOC_INFO ++ unset GNUSTEP_LOCAL_APPS ++ unset GNUSTEP_LOCAL_ADMIN_APPS ++ unset GNUSTEP_LOCAL_WEB_APPS ++ unset GNUSTEP_LOCAL_TOOLS ++ unset GNUSTEP_LOCAL_ADMIN_TOOLS ++ unset GNUSTEP_LOCAL_LIBRARY ++ unset GNUSTEP_LOCAL_HEADERS ++ unset GNUSTEP_LOCAL_LIBRARIES ++ unset GNUSTEP_LOCAL_DOC ++ unset GNUSTEP_LOCAL_DOC_MAN ++ unset GNUSTEP_LOCAL_DOC_INFO ++ unset GNUSTEP_USER_APPS ++ unset GNUSTEP_USER_ADMIN_APPS ++ unset GNUSTEP_USER_WEB_APPS ++ unset GNUSTEP_USER_TOOLS ++ unset GNUSTEP_USER_ADMIN_TOOLS ++ unset GNUSTEP_USER_LIBRARY ++ unset GNUSTEP_USER_HEADERS ++ unset GNUSTEP_USER_LIBRARIES ++ unset GNUSTEP_USER_DOC ++ unset GNUSTEP_USER_DOC_MAN ++ unset GNUSTEP_USER_DOC_INFO ++ unset GNUSTEP_SYSTEM_USERS_DIR ++ unset GNUSTEP_LOCAL_USERS_DIR ++ unset GNUSTEP_NETWORK_USERS_DIR ++ '[' -n '' ']' + make -j8 messages=yes debug=yes strip=no shared=yes CONFIG_SYSTEM_LIBS=-lgnustep-base make: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2' This is gnustep-make 2.7.0. Type 'gmake print-gnustep-make-help' for help. Running in gnustep-make version 2 strict mode. make: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2' Making build-headers in subprojects of framework BioCocoa... Making build-headers in subprojects of subproject BCFoundation... Making build-headers for subproject BCAlignment... /usr/share/GNUstep/Makefiles/mkinstalldirs ../../BioCocoa.framework/Versions/2/Headers /bin/install -c -p -m 644 BCPairwiseAlignment.h ../../BioCocoa.framework/Versions/2/Headers/BCPairwiseAlignment.h /bin/install -c -p -m 644 BCScoreMatrix.h ../../BioCocoa.framework/Versions/2/Headers/BCScoreMatrix.h /bin/install -c -p -m 644 BCSequenceAlignment.h ../../BioCocoa.framework/Versions/2/Headers/BCSequenceAlignment.h Making build-headers for subproject BCAnalysis... /bin/install -c -p -m 644 BCMCP.h ../../BioCocoa.framework/Versions/2/Headers/BCMCP.h /bin/install -c -p -m 644 BCSuffixArray.h ../../BioCocoa.framework/Versions/2/Headers/BCSuffixArray.h Making build-headers for subproject BCGeneExpression... /bin/install -c -p -m 644 BCSeries.h ../../BioCocoa.framework/Versions/2/Headers/BCSeries.h /bin/install -c -p -m 644 BCSample.h ../../BioCocoa.framework/Versions/2/Headers/BCSample.h /bin/install -c -p -m 644 BCPlatform.h ../../BioCocoa.framework/Versions/2/Headers/BCPlatform.h /bin/install -c -p -m 644 BCParseSOFT.h ../../BioCocoa.framework/Versions/2/Headers/BCParseSOFT.h Making build-headers for subproject BCGeneticCode... /bin/install -c -p -m 644 BCCodonDNA.h ../../BioCocoa.framework/Versions/2/Headers/BCCodonDNA.h /bin/install -c -p -m 644 BCCodon.h ../../BioCocoa.framework/Versions/2/Headers/BCCodon.h /bin/install -c -p -m 644 BCCodonRNA.h ../../BioCocoa.framework/Versions/2/Headers/BCCodonRNA.h /bin/install -c -p -m 644 BCGeneticCode.h ../../BioCocoa.framework/Versions/2/Headers/BCGeneticCode.h Making build-headers for subproject BCProteinStructure... /bin/install -c -p -m 644 BCAtom.h ../../BioCocoa.framework/Versions/2/Headers/BCAtom.h /bin/install -c -p -m 644 BCProteinStructure.h ../../BioCocoa.framework/Versions/2/Headers/BCProteinStructure.h /bin/install -c -p -m 644 BCSecondaryStructure.h ../../BioCocoa.framework/Versions/2/Headers/BCSecondaryStructure.h /bin/install -c -p -m 644 BCChain.h ../../BioCocoa.framework/Versions/2/Headers/BCChain.h /bin/install -c -p -m 644 BCResidue.h ../../BioCocoa.framework/Versions/2/Headers/BCResidue.h /bin/install -c -p -m 644 BCSequenceStructure.h ../../BioCocoa.framework/Versions/2/Headers/BCSequenceStructure.h Making build-headers for subproject BCSequence... /bin/install -c -p -m 644 BCAnnotation.h ../../BioCocoa.framework/Versions/2/Headers/BCAnnotation.h /bin/install -c -p -m 644 BCSequence.h ../../BioCocoa.framework/Versions/2/Headers/BCSequence.h /bin/install -c -p -m 644 BCSequenceArray.h ../../BioCocoa.framework/Versions/2/Headers/BCSequenceArray.h /bin/install -c -p -m 644 BCSequenceCodon.h ../../BioCocoa.framework/Versions/2/Headers/BCSequenceCodon.h Making build-headers for subproject BCSequenceIO... /bin/install -c -p -m 644 BCSequenceReader.h ../../BioCocoa.framework/Versions/2/Headers/BCSequenceReader.h /bin/install -c -p -m 644 BCSequenceWriter.h ../../BioCocoa.framework/Versions/2/Headers/BCSequenceWriter.h /bin/install -c -p -m 644 BCCachedSequenceFile.h ../../BioCocoa.framework/Versions/2/Headers/BCCachedSequenceFile.h /bin/install -c -p -m 644 BCCachedFastaFile.h ../../BioCocoa.framework/Versions/2/Headers/BCCachedFastaFile.h Making build-headers for subproject BCSymbol... /bin/install -c -p -m 644 BCAminoAcid.h ../../BioCocoa.framework/Versions/2/Headers/BCAminoAcid.h /bin/install -c -p -m 644 BCNucleotide.h ../../BioCocoa.framework/Versions/2/Headers/BCNucleotide.h /bin/install -c -p -m 644 BCSymbol.h ../../BioCocoa.framework/Versions/2/Headers/BCSymbol.h /bin/install -c -p -m 644 BCNucleotideDNA.h ../../BioCocoa.framework/Versions/2/Headers/BCNucleotideDNA.h /bin/install -c -p -m 644 BCNucleotideRNA.h ../../BioCocoa.framework/Versions/2/Headers/BCNucleotideRNA.h /bin/install -c -p -m 644 BCSymbolSet.h ../../BioCocoa.framework/Versions/2/Headers/BCSymbolSet.h Making build-headers for subproject BCTools... /bin/install -c -p -m 644 BCSequenceTool.h ../../BioCocoa.framework/Versions/2/Headers/BCSequenceTool.h /bin/install -c -p -m 644 BCToolDigest.h ../../BioCocoa.framework/Versions/2/Headers/BCToolDigest.h /bin/install -c -p -m 644 BCToolHydropathyCalculator.h ../../BioCocoa.framework/Versions/2/Headers/BCToolHydropathyCalculator.h /bin/install -c -p -m 644 BCToolMassCalculator.h ../../BioCocoa.framework/Versions/2/Headers/BCToolMassCalculator.h /bin/install -c -p -m 644 BCToolComplement.h ../../BioCocoa.framework/Versions/2/Headers/BCToolComplement.h /bin/install -c -p -m 644 BCToolSequenceFinder.h ../../BioCocoa.framework/Versions/2/Headers/BCToolSequenceFinder.h /bin/install -c -p -m 644 BCToolSymbolCounter.h ../../BioCocoa.framework/Versions/2/Headers/BCToolSymbolCounter.h /bin/install -c -p -m 644 BCToolTranslator.h ../../BioCocoa.framework/Versions/2/Headers/BCToolTranslator.h /bin/install -c -p -m 644 BCToolTranslatorDNA.h ../../BioCocoa.framework/Versions/2/Headers/BCToolTranslatorDNA.h Making build-headers for subproject BCUtils... /bin/install -c -p -m 644 BCDataMatrix.h ../../BioCocoa.framework/Versions/2/Headers/BCDataMatrix.h /bin/install -c -p -m 644 BCUtilData.h ../../BioCocoa.framework/Versions/2/Headers/BCUtilData.h /bin/install -c -p -m 644 BCUtilStrings.h ../../BioCocoa.framework/Versions/2/Headers/BCUtilStrings.h Making build-headers for subproject BCFoundation... /bin/install -c -p -m 644 BCFoundation.h ../BioCocoa.framework/Versions/2/Headers/BCFoundation.h /bin/install -c -p -m 644 BCFoundationDefines.h ../BioCocoa.framework/Versions/2/Headers/BCFoundationDefines.h /bin/install -c -p -m 644 BCStringDefinitions.h ../BioCocoa.framework/Versions/2/Headers/BCStringDefinitions.h /bin/install -c -p -m 644 BCPreferences.h ../BioCocoa.framework/Versions/2/Headers/BCPreferences.h Making build-headers for framework BioCocoa... /usr/share/GNUstep/Makefiles/mkinstalldirs ./derived_src; \ touch derived_src/.stamp /usr/share/GNUstep/Makefiles/mkinstalldirs BioCocoa.framework/Versions/2/Resources cd ./BioCocoa.framework/Versions; \ rm -f Current; \ ln -s 2 Current cd ./BioCocoa.framework; \ if [ ! -h "Resources" ]; then \ rm -f Resources; \ ln -s Versions/Current/Resources Resources; \ fi; \ if [ ! -h "Headers" ]; then \ rm -f Headers; \ ln -s Versions/Current/Headers Headers; \ fi cd ./derived_src; \ if [ ! -h "BioCocoa" ]; then \ rm -f ./BioCocoa; \ ln -s ../BioCocoa.framework/Headers \ ./BioCocoa; \ fi make: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj make: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2' Making all in subprojects of framework BioCocoa... gmake[1]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[1]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation' Making all in subprojects of subproject BCFoundation... gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCAlignment' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCAlignment' Making all for subproject BCAlignment... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCAlignment.obj/ i586-alt-linux-gcc BCScoreMatrix.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCAlignment.obj/BCScoreMatrix.m.o i586-alt-linux-gcc BCSequenceAlignment.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCAlignment.obj/BCSequenceAlignment.m.o i586-alt-linux-gcc BCPairwiseAlignment.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCAlignment.obj/BCPairwiseAlignment.m.o i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCAlignment.obj/BCPairwiseAlignment.m.o obj/BCAlignment.obj/BCScoreMatrix.m.o obj/BCAlignment.obj/BCSequenceAlignment.m.o ; gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCAnalysis' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCAnalysis' Making all for subproject BCAnalysis... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCAnalysis.obj/ i586-alt-linux-gcc BCSuffixArray.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCAnalysis.obj/BCSuffixArray.m.o BCSuffixArray.m: In function '-[BCSuffixArray dumpSuffixArray]': BCSuffixArray.m:896:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 896 | fread(&sa1Offset, sizeof(int), 1, sa1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCSuffixArray.m:897:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 897 | fread(&sa1File, sizeof(int), 1, sa1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCSuffixArray.m:932:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 932 | fread(&sa1Offset, sizeof(int), 1, sa1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCSuffixArray.m:933:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 933 | fread(&sa1File, sizeof(int), 1, sa1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCSuffixArray.m: In function '-[BCSuffixArrayUnionEnumerator nextSuffixPosition:sequence:suffixArray:]': BCSuffixArray.m:1464:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1464 | fread(&(suffixPositions[i]), sizeof(int), 1, arrayFiles[i]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCSuffixArray.m:1465:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1465 | fread(&(suffixSequences[i]), sizeof(int), 1, arrayFiles[i]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCSuffixArray.m:1598:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1598 | fread(&(suffixPositions[currentSuffix]), sizeof(int), 1, arrayFiles[currentSuffix]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCSuffixArray.m:1599:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1599 | fread(&(suffixSequences[currentSuffix]), sizeof(int), 1, arrayFiles[currentSuffix]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i586-alt-linux-gcc BCMCP.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCAnalysis.obj/BCMCP.m.o BCMCP.m: In function '+[BCMCP mcpToFile:suffixArray:withSuffixArray:lowerBound:]': BCMCP.m:160:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 160 | fread(&sa1Offset, sizeof(int), 1, sa1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:161:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 161 | fread(&sa1File, sizeof(int), 1, sa1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:163:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 163 | fread(&sa2Offset, sizeof(int), 1, sa2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:164:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 164 | fread(&sa2File, sizeof(int), 1, sa2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:334:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 334 | fread(&sa2Offset, sizeof(int), 1, sa2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:335:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 335 | fread(&sa2File, sizeof(int), 1, sa2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:352:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 352 | fread(&sa1Offset, sizeof(int), 1, sa1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:353:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 353 | fread(&sa1File, sizeof(int), 1, sa1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:358:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 358 | fread(&sa2Offset, sizeof(int), 1, sa2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:359:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 359 | fread(&sa2File, sizeof(int), 1, sa2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:366:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 366 | fread(&sa2Offset, sizeof(int), 1, sa2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:367:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 367 | fread(&sa2File, sizeof(int), 1, sa2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m: In function '-[BCMCP intersectToFile:withMCP:]': BCMCP.m:486:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 486 | fread(&mcp1Length, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:487:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 487 | fread(&mcp1NumFiles, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:489:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 489 | fread(&(mcp1Offset[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:490:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 490 | fread(&(mcp1File[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:514:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 514 | fread(&mcp2Length, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:515:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 515 | fread(&mcp2NumFiles, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:517:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 517 | fread(&(mcp2Offset[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:518:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 518 | fread(&(mcp2File[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:735:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 735 | fread(&mcp1Length, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:736:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 736 | fread(&mcp1NumFiles, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:738:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 738 | fread(&(mcp1Offset[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:739:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 739 | fread(&(mcp1File[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:762:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 762 | fread(&mcp2Length, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:763:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 763 | fread(&mcp2NumFiles, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:765:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 765 | fread(&(mcp2Offset[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:766:11: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 766 | fread(&(mcp2File[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m: In function '-[BCMCP unionToFile:withMCP:]': BCMCP.m:910:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 910 | fread(&mcp1Length, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:911:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 911 | fread(&mcp1NumFiles, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:913:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 913 | fread(&(mcp1Offset[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:914:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 914 | fread(&(mcp1File[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:936:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 936 | fread(&mcp2Length, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:937:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 937 | fread(&mcp2NumFiles, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:939:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 939 | fread(&(mcp2Offset[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:940:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 940 | fread(&(mcp2File[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1093:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1093 | fread(&mcp1Length, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1094:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1094 | fread(&mcp1NumFiles, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1096:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1096 | fread(&(mcp1Offset[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1097:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1097 | fread(&(mcp1File[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1123:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1123 | fread(&mcp2Length, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1124:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1124 | fread(&mcp2NumFiles, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1126:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1126 | fread(&(mcp2Offset[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1127:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1127 | fread(&(mcp2File[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1167:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1167 | fread(&mcp1Length, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1168:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1168 | fread(&mcp1NumFiles, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1170:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1170 | fread(&(mcp1Offset[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1171:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1171 | fread(&(mcp1File[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1186:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1186 | fread(&mcp2Length, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1187:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1187 | fread(&mcp2NumFiles, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1189:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1189 | fread(&(mcp2Offset[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1190:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1190 | fread(&(mcp2File[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1222:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1222 | fread(&mcp2Length, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1223:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1223 | fread(&mcp2NumFiles, sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1225:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1225 | fread(&(mcp2Offset[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1226:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1226 | fread(&(mcp2File[i]), sizeof(int), 1, mcp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1239:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1239 | fread(&mcp1Length, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1240:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1240 | fread(&mcp1NumFiles, sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1242:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1242 | fread(&(mcp1Offset[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1243:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1243 | fread(&(mcp1File[i]), sizeof(int), 1, mcp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m: In function '-[BCMCP trimToFile:]': BCMCP.m:1272:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1272 | fread(&mcpLength, sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1273:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1273 | fread(&mcpNumFiles, sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1275:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1275 | fread(&(mcpOffset[i]), sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1276:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1276 | fread(&(mcpFile[i]), sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m: In function '-[BCMCP outputFormat:withMinimumLength:]': BCMCP.m:1481:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1481 | fread(&mcpLength, sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1482:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1482 | fread(&mcpNumFiles, sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1485:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1485 | fread(&(mcpOffset[i]), sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1486:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1486 | fread(&(mcpFile[i]), sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1603:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1603 | fread(&mcpLength, sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1604:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1604 | fread(&mcpNumFiles, sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1606:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1606 | fread(&(mcpOffset[i]), sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCMCP.m:1607:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1607 | fread(&(mcpFile[i]), sizeof(int), 1, mcp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCAnalysis.obj/BCMCP.m.o obj/BCAnalysis.obj/BCSuffixArray.m.o ; gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCGeneExpression' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCGeneExpression' Making all for subproject BCGeneExpression... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCGeneExpression.obj/ i586-alt-linux-gcc BCSample.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCGeneExpression.obj/BCSample.m.o i586-alt-linux-gcc BCPlatform.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCGeneExpression.obj/BCPlatform.m.o i586-alt-linux-gcc BCParseSOFT.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCGeneExpression.obj/BCParseSOFT.m.o i586-alt-linux-gcc BCSeries.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCGeneExpression.obj/BCSeries.m.o i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCGeneExpression.obj/BCSeries.m.o obj/BCGeneExpression.obj/BCSample.m.o obj/BCGeneExpression.obj/BCPlatform.m.o obj/BCGeneExpression.obj/BCParseSOFT.m.o ; gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCGeneticCode' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCGeneticCode' Making all for subproject BCGeneticCode... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCGeneticCode.obj/ i586-alt-linux-gcc BCCodonDNA.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCGeneticCode.obj/BCCodonDNA.m.o i586-alt-linux-gcc BCCodonRNA.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCGeneticCode.obj/BCCodonRNA.m.o i586-alt-linux-gcc BCCodon.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCGeneticCode.obj/BCCodon.m.o i586-alt-linux-gcc BCGeneticCode.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCGeneticCode.obj/BCGeneticCode.m.o BCGeneticCode.m: In function '+[BCGeneticCode priv:createCodonArraysFromDictionary:]': BCGeneticCode.m:221:23: warning: variable 'RNACodon' set but not used [-Wunused-but-set-variable] 221 | BCCodon *aCodon, *RNACodon; | ^~~~~~~~ i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCGeneticCode.obj/BCCodonDNA.m.o obj/BCGeneticCode.obj/BCCodon.m.o obj/BCGeneticCode.obj/BCCodonRNA.m.o obj/BCGeneticCode.obj/BCGeneticCode.m.o ; gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCProteinStructure' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCProteinStructure' Making all for subproject BCProteinStructure... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCProteinStructure.obj/ i586-alt-linux-gcc BCSecondaryStructure.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCProteinStructure.obj/BCSecondaryStructure.m.o i586-alt-linux-gcc BCResidue.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCProteinStructure.obj/BCResidue.m.o i586-alt-linux-gcc BCAtom.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCProteinStructure.obj/BCAtom.m.o i586-alt-linux-gcc BCSequenceStructure.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCProteinStructure.obj/BCSequenceStructure.m.o i586-alt-linux-gcc BCChain.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCProteinStructure.obj/BCChain.m.o i586-alt-linux-gcc BCProteinStructure.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCProteinStructure.obj/BCProteinStructure.m.o i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCProteinStructure.obj/BCAtom.m.o obj/BCProteinStructure.obj/BCProteinStructure.m.o obj/BCProteinStructure.obj/BCSecondaryStructure.m.o obj/BCProteinStructure.obj/BCChain.m.o obj/BCProteinStructure.obj/BCResidue.m.o obj/BCProteinStructure.obj/BCSequenceStructure.m.o ; gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCSequence' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCSequence' Making all for subproject BCSequence... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCSequence.obj/ i586-alt-linux-gcc BCAnnotation.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSequence.obj/BCAnnotation.m.o i586-alt-linux-gcc BCSequenceCodon.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSequence.obj/BCSequenceCodon.m.o BCSequenceCodon.m: In function '-[BCSequenceCodon openReadingFramesLongerThanCutoff:]': BCSequenceCodon.m:301:16: warning: 'inORF' may be used uninitialized in this function [-Wmaybe-uninitialized] 301 | if ( inORF ) | ^ i586-alt-linux-gcc BCSequenceArray.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSequence.obj/BCSequenceArray.m.o i586-alt-linux-gcc BCSequence.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSequence.obj/BCSequence.m.o i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCSequence.obj/BCAnnotation.m.o obj/BCSequence.obj/BCSequence.m.o obj/BCSequence.obj/BCSequenceArray.m.o obj/BCSequence.obj/BCSequenceCodon.m.o ; gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCSequenceIO' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCSequenceIO' Making all for subproject BCSequenceIO... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCSequenceIO.obj/ i586-alt-linux-gcc BCSequenceWriter.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSequenceIO.obj/BCSequenceWriter.m.o i586-alt-linux-gcc BCCachedSequenceFile.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSequenceIO.obj/BCCachedSequenceFile.m.o i586-alt-linux-gcc BCCachedFastaFile.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSequenceIO.obj/BCCachedFastaFile.m.o BCCachedFastaFile.m: In function '-[BCCachedFastaFile initWithContentsOfFile:]': BCCachedFastaFile.m:58:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 58 | fread(&c, sizeof(char), 1, g1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCCachedFastaFile.m:73:7: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 73 | fread(&c, sizeof(char), 1, g1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCCachedFastaFile.m:76:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 76 | fread(&c, sizeof(char), 1, g1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCCachedFastaFile.m:97:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fread(&c, sizeof(char), 1, g1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCCachedFastaFile.m: In function '-[BCCachedFastaFile symbols:ForCurrentSequenceAtPosition:ofLength:]': BCCachedFastaFile.m:149:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 149 | fread(&c, sizeof(char), 1, fileHandle); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCCachedFastaFile.m: In function '-[BCCachedFastaFile initWithContentsOfFile:]': BCCachedFastaFile.m:104:3: warning: 'filePos' may be used uninitialized in this function [-Wmaybe-uninitialized] 104 | [d setObject: [NSNumber numberWithUnsignedLongLong: (filePos - 1)] forKey: @"end"]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i586-alt-linux-gcc BCSequenceReader.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSequenceIO.obj/BCSequenceReader.m.o BCSequenceReader.m: In function '-[BCSequenceReader readFileUsingText:]': BCSequenceReader.m:167:3: warning: no '-initWithRTF:documentAttributes:' method found 167 | NSAttributedString *rtfstring = [[NSAttributedString alloc] initWithRTF: [entryString dataUsingEncoding: NSUTF8StringEncoding] documentAttributes: nil]; | ^~~~~~~~~~~~~~~~~~ BCSequenceReader.m:167:3: warning: (messages without a matching method signature will be assumed to return 'id' and accept '...' as arguments) BCSequenceReader.m: In function '-[BCSequenceReader readMacVectorFile:]': BCSequenceReader.m:651:18: warning: variable 'annotationsArray' set but not used [-Wunused-but-set-variable] 651 | NSMutableArray *annotationsArray; | ^~~~~~~~~~~~~~~~ BCSequenceReader.m: In function '-[BCSequenceReader readClustalFile:]': BCSequenceReader.m:798:3: warning: passing argument 2 of 'scanUpToString:intoString:' from incompatible pointer type [-Wincompatible-pointer-types] 798 | [lineScanner scanUpToString:@" " intoString: nil]; | ^ | | | id BCSequenceReader.m:798:3: note: expected 'struct NSString **' but argument is of type 'id' BCSequenceReader.m: In function '-[BCSequenceReader readPhylipFile:]': BCSequenceReader.m:1113:31: warning: variable 'annotationsArray' set but not used [-Wunused-but-set-variable] 1113 | NSMutableArray *linesArray, *annotationsArray, *namesArray, *sequenceArray; | ^~~~~~~~~~~~~~~~ BCSequenceReader.m: In function '-[BCSequenceReader readSwissProtFile:]': BCSequenceReader.m:426:3: warning: 'sequenceString' may be used uninitialized in this function [-Wmaybe-uninitialized] 426 | newSequence = [BCSequence sequenceWithString: sequenceString]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCSequenceReader.m: In function '-[BCSequenceReader readClustalFile:]': BCSequenceReader.m:822:3: warning: 'sequenceRange.location' may be used uninitialized in this function [-Wmaybe-uninitialized] 822 | sequenceString = [line substringFromIndex: sequenceRange.location]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BCSequenceReader.m: In function '-[BCSequenceReader readFASTQFile:]': BCSequenceReader.m:1310:6: warning: 'seqData' may be used uninitialized in this function [-Wmaybe-uninitialized] 1310 | BCSequence *newSequence = [[BCSequence alloc] initWithData: seqData symbolSet: nil]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCSequenceIO.obj/BCSequenceReader.m.o obj/BCSequenceIO.obj/BCSequenceWriter.m.o obj/BCSequenceIO.obj/BCCachedSequenceFile.m.o obj/BCSequenceIO.obj/BCCachedFastaFile.m.o ; gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCSymbol' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCSymbol' Making all for subproject BCSymbol... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCSymbol.obj/ i586-alt-linux-gcc BCNucleotide.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSymbol.obj/BCNucleotide.m.o i586-alt-linux-gcc BCAminoAcid.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSymbol.obj/BCAminoAcid.m.o i586-alt-linux-gcc BCNucleotideDNA.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSymbol.obj/BCNucleotideDNA.m.o i586-alt-linux-gcc BCNucleotideRNA.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSymbol.obj/BCNucleotideRNA.m.o i586-alt-linux-gcc BCSymbol.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSymbol.obj/BCSymbol.m.o i586-alt-linux-gcc BCSymbolSet.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCSymbol.obj/BCSymbolSet.m.o i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCSymbol.obj/BCAminoAcid.m.o obj/BCSymbol.obj/BCNucleotide.m.o obj/BCSymbol.obj/BCSymbol.m.o obj/BCSymbol.obj/BCNucleotideDNA.m.o obj/BCSymbol.obj/BCNucleotideRNA.m.o obj/BCSymbol.obj/BCSymbolSet.m.o ; gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCTools' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCTools' Making all for subproject BCTools... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCTools.obj/ i586-alt-linux-gcc BCSequenceTool.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCTools.obj/BCSequenceTool.m.o i586-alt-linux-gcc BCToolTranslator.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCTools.obj/BCToolTranslator.m.o i586-alt-linux-gcc BCToolDigest.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCTools.obj/BCToolDigest.m.o i586-alt-linux-gcc BCToolHydropathyCalculator.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCTools.obj/BCToolHydropathyCalculator.m.o i586-alt-linux-gcc BCToolComplement.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCTools.obj/BCToolComplement.m.o i586-alt-linux-gcc BCToolSymbolCounter.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCTools.obj/BCToolSymbolCounter.m.o i586-alt-linux-gcc BCToolMassCalculator.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCTools.obj/BCToolMassCalculator.m.o i586-alt-linux-gcc BCToolTranslatorDNA.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCTools.obj/BCToolTranslatorDNA.m.o i586-alt-linux-gcc BCToolSequenceFinder.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCTools.obj/BCToolSequenceFinder.m.o i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCTools.obj/BCSequenceTool.m.o obj/BCTools.obj/BCToolDigest.m.o obj/BCTools.obj/BCToolHydropathyCalculator.m.o obj/BCTools.obj/BCToolMassCalculator.m.o obj/BCTools.obj/BCToolComplement.m.o obj/BCTools.obj/BCToolSequenceFinder.m.o obj/BCTools.obj/BCToolSymbolCounter.m.o obj/BCTools.obj/BCToolTranslator.m.o obj/BCTools.obj/BCToolTranslatorDNA.m.o ; gmake[2]: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCUtils' cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj gmake[2]: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCUtils' Making all for subproject BCUtils... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCUtils.obj/ i586-alt-linux-gcc BCUtilData.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCUtils.obj/BCUtilData.m.o i586-alt-linux-gcc BCDataMatrix.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCUtils.obj/BCDataMatrix.m.o i586-alt-linux-gcc BCUtilStrings.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I.. -I../BCAnalysis -I../BCGeneticCode -I../BCProteinStructure -I../BCSequence -I../BCSequenceIO -I../BCSymbol -I../BCTools -I../BCTools/BCDigest -I../BCTools/BCSequenceProperty -I../BCTools/BCSequenceTools -I../BCTools/BCTranslation -I../BCUtils -I./../../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCUtils.obj/BCUtilStrings.m.o BCUtilStrings.m: In function '-[NSString(StringAdditions) stringBeginsWithTwoNumbers]': BCUtilStrings.m:98:2: warning: passing argument 1 of 'scanInt:' from incompatible pointer type [-Wincompatible-pointer-types] 98 | if ([scanner scanInt:nil]) | ^~ | | | id BCUtilStrings.m:98:2: note: expected 'int *' but argument is of type 'id' BCUtilStrings.m:100:3: warning: passing argument 1 of 'scanInt:' from incompatible pointer type [-Wincompatible-pointer-types] 100 | if ([scanner scanInt:nil]) | ^~ | | | id BCUtilStrings.m:100:3: note: expected 'int *' but argument is of type 'id' i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCUtils.obj/BCDataMatrix.m.o obj/BCUtils.obj/BCUtilData.m.o obj/BCUtils.obj/BCUtilStrings.m.o ; Making all for subproject BCFoundation... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BCFoundation.obj/ i586-alt-linux-gcc BCStringDefinitions.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I. -I./BCAnalysis -I./BCGeneticCode -I./BCProteinStructure -I./BCSequence -I./BCSequenceIO -I./BCSymbol -I./BCTools -I./BCTools/BCDigest -I./BCTools/BCSequenceProperty -I./BCTools/BCSequenceTools -I./BCTools/BCTranslation -I./BCUtils -I./../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCFoundation.obj/BCStringDefinitions.m.o i586-alt-linux-gcc BCPreferences.m -c \ -Wno-import -Wno-unknown-pragmas -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I. -I./BCAnalysis -I./BCGeneticCode -I./BCProteinStructure -I./BCSequence -I./BCSequenceIO -I./BCSymbol -I./BCTools -I./BCTools/BCDigest -I./BCTools/BCSequenceProperty -I./BCTools/BCSequenceTools -I./BCTools/BCTranslation -I./BCUtils -I./../derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include \ -o obj/BCFoundation.obj/BCPreferences.m.o i586-alt-linux-gcc -nostdlib -r -shared-libgcc -pthread -fexceptions -o ./obj/subproject.o obj/BCFoundation.obj/BCStringDefinitions.m.o obj/BCFoundation.obj/BCPreferences.m.o BCAlignment/obj/subproject.o BCAnalysis/obj/subproject.o BCGeneExpression/obj/subproject.o BCGeneticCode/obj/subproject.o BCProteinStructure/obj/subproject.o BCSequence/obj/subproject.o BCSequenceIO/obj/subproject.o BCSymbol/obj/subproject.o BCTools/obj/subproject.o BCUtils/obj/subproject.o ; Making all for framework BioCocoa... cd .; \ /usr/share/GNUstep/Makefiles/mkinstalldirs ./obj/BioCocoa.obj/ classes=""; \ for object_file in ./BCFoundation/obj/subproject.o __dummy__; do \ if [ "$object_file" != "__dummy__" ]; then \ sym=`nm -Pg $object_file | sed -n -e '/^__objc_class_name_[A-Za-z0-9_.]* [^U]/ {s/^__objc_class_name_\([A-Za-z0-9_.]*\) [^U].*/\1/p;}'`; \ classes="$classes $sym"; \ fi; \ done; \ classlist=""; \ classarray=""; \ for f in $classes __dummy__ ; do \ if [ "$f" != "__dummy__" ]; then \ if [ "$classlist" = "" ]; then \ classlist="@\"$f\""; \ classarray="(\"$f\""; \ else \ classlist="$classlist, @\"$f\""; \ classarray="$classarray, \"$f\""; \ fi; \ fi; \ done; \ if [ "$classlist" = "" ]; then \ classlist="NULL"; \ classarray="()"; \ else \ classlist="$classlist, NULL"; \ classarray="$classarray)"; \ fi; \ echo "$classarray" > ./derived_src/BioCocoa-class-list; \ echo "#include " > derived_src/NSFramework_BioCocoa.m; \ echo "#include " > derived_src/NSFramework_BioCocoa.m; \ echo "@interface NSFramework_BioCocoa : NSObject" >> derived_src/NSFramework_BioCocoa.m; \ echo "+ (NSString *)frameworkVersion;" >> derived_src/NSFramework_BioCocoa.m; \ echo "+ (NSString *const*)frameworkClasses;" >> derived_src/NSFramework_BioCocoa.m; \ echo "@end" >> derived_src/NSFramework_BioCocoa.m; \ echo "@implementation NSFramework_BioCocoa" >> derived_src/NSFramework_BioCocoa.m; \ echo "+ (NSString *)frameworkVersion { return @\"2\"; }" >> derived_src/NSFramework_BioCocoa.m; \ echo "static NSString *allClasses[] = {$classlist};" >> derived_src/NSFramework_BioCocoa.m; \ echo "+ (NSString *const*)frameworkClasses { return allClasses; }" >> derived_src/NSFramework_BioCocoa.m;\ echo "@end" >> derived_src/NSFramework_BioCocoa.m i586-alt-linux-gcc derived_src/NSFramework_BioCocoa.m -c -DGNUSTEP -DGNUSTEP_BASE_LIBRARY=1 -DGNU_GUI_LIBRARY=1 -DGNU_RUNTIME=1 -DGNUSTEP_BASE_LIBRARY=1 -fno-strict-aliasing -fexceptions -fobjc-exceptions -D_NATIVE_OBJC_EXCEPTIONS -pthread -fPIC -DDEBUG -fno-omit-frame-pointer -Wall -DGSWARN -DGSDIAGNOSE -Wno-import -pipe -frecord-gcc-switches -Wall -g -pipe -frecord-gcc-switches -Wall -g -O2 -DGNUSTEP -DGNU_RUNTIME -fgnu-runtime -fconstant-string-class=NSConstantString -I./derived_src -I. -I/usr/src/GNUstep/Headers -I/usr/include -o obj/BioCocoa.obj/NSFramework_BioCocoa.o \ i586-alt-linux-gcc -shared -Wl,-soname,libBioCocoa.so.2 -rdynamic -shared-libgcc -pthread -fexceptions -o ./BioCocoa.framework/Versions/2/./libBioCocoa.so.2.2.2 obj/BioCocoa.obj/NSFramework_BioCocoa.o BCFoundation/obj/subproject.o -L/usr/src/GNUstep/Libraries -L/usr/lib -lgnustep-base -lobjc && (cd ./BioCocoa.framework/Versions/2/.; rm -f libBioCocoa.so; if [ "libBioCocoa.so.2" != "libBioCocoa.so.2.2.2" ]; then rm -f libBioCocoa.so.2; ln -s libBioCocoa.so.2.2.2 libBioCocoa.so.2; fi; ln -s libBioCocoa.so.2 libBioCocoa.so; ) || rm -f ./BioCocoa.framework/Versions/2/./libBioCocoa.so.2.2.2 ; \ (cd ./BioCocoa.framework/Versions/2/.; \ rm -f BioCocoa; \ ln -s libBioCocoa.so BioCocoa) \ ld: BCFoundation/obj/subproject.o: in function `_i_BCSuffixArray__constructFromSequenceArray_strand_': /usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2/BCFoundation/BCAnalysis/BCSuffixArray.m:513: warning: the use of `mktemp' is dangerous, better use `mkstemp' or `mkdtemp' for f in BCFoundation/BCSymbol/SymbolTemplates/nucleotides.plist BCFoundation/BCSymbol/SymbolTemplates/aminoacids.plist; do \ if [ -f .//$f -o -d .//$f ]; then \ cp -fr .//$f ./BioCocoa.framework/Versions/2/Resources/; \ else \ echo "Warning: .//$f not found - ignoring"; \ fi; \ done for subproject in BCFoundation; do \ if [ -d $subproject/Resources/Subproject ]; then \ for f in $subproject/Resources/Subproject/*; do \ if [ $f != $subproject'/Resources/Subproject/*' ]; then \ cp -fr $f ./BioCocoa.framework/Versions/2/Resources/; \ fi; \ done; \ fi; \ done (echo "{"; echo ' NOTE = "Automatically generated, do not edit!";'; \ echo " NSExecutable = \"BioCocoa\";"; \ echo " NSMainNibFile = \"\";"; \ echo " NSPrincipalClass = \"BioCocoa\";"; \ echo " Classes = "; \ cat ./derived_src/BioCocoa-class-list; \ echo " ;"; \ echo "}") >BioCocoa.framework/Versions/2/Resources/Info-gnustep.plist if [ -r "" ]; then \ plmerge BioCocoa.framework/Versions/2/Resources/Info-gnustep.plist ; \ fi cd ./BioCocoa.framework/.; \ rm -f BioCocoa libBioCocoa.so; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh . \ Versions/Current/./BioCocoa short` \ BioCocoa; \ ln -s `/usr/share/GNUstep/Makefiles/relative_path.sh . \ Versions/Current/./libBioCocoa.so short` \ libBioCocoa.so + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.87282 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/gnustep-BioCocoa-buildroot + : + /bin/rm -rf -- /usr/src/tmp/gnustep-BioCocoa-buildroot + PATH=/usr/libexec/rpm-build:/usr/src/GNUstep/Tools:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games + cd gnustep-BioCocoa-2.2.2 + . /usr/share/GNUstep/Makefiles/GNUstep.sh ++ '[' -n '' ']' ++ GNUSTEP_MAKE_STRICT_V2_MODE=yes ++ '[' -z '' ']' ++ GNUSTEP_CONFIG_FILE=/etc/GNUstep/GNUstep.conf ++ '[' -z '' ']' ++ GNUSTEP_USER_CONFIG_FILE=.GNUstep.conf ++ '[' -f /etc/GNUstep/GNUstep.conf ']' ++ . /etc/GNUstep/GNUstep.conf +++ GNUSTEP_USER_CONFIG_FILE=.GNUstep.conf +++ GNUSTEP_USER_DEFAULTS_DIR=GNUstep/Defaults +++ GNUSTEP_MAKEFILES=/usr/share/GNUstep/Makefiles +++ GNUSTEP_SYSTEM_USERS_DIR=/home +++ GNUSTEP_NETWORK_USERS_DIR=/home +++ GNUSTEP_LOCAL_USERS_DIR=/home +++ GNUSTEP_SYSTEM_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_SYSTEM_ADMIN_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_SYSTEM_WEB_APPS=/usr/lib/GNUstep/WebApplications +++ GNUSTEP_SYSTEM_TOOLS=/usr/bin +++ GNUSTEP_SYSTEM_ADMIN_TOOLS=/usr/sbin +++ GNUSTEP_SYSTEM_LIBRARY=/usr/lib/GNUstep +++ GNUSTEP_SYSTEM_HEADERS=/usr/include +++ GNUSTEP_SYSTEM_LIBRARIES=/usr/lib +++ GNUSTEP_SYSTEM_DOC=/usr/share/doc/GNUstep +++ GNUSTEP_SYSTEM_DOC_MAN=/usr/share/man +++ GNUSTEP_SYSTEM_DOC_INFO=/usr/share/info +++ GNUSTEP_NETWORK_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_NETWORK_ADMIN_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_NETWORK_WEB_APPS=/usr/lib/GNUstep/WebApplications +++ GNUSTEP_NETWORK_TOOLS=/usr/bin +++ GNUSTEP_NETWORK_ADMIN_TOOLS=/usr/sbin +++ GNUSTEP_NETWORK_LIBRARY=/usr/lib/GNUstep +++ GNUSTEP_NETWORK_HEADERS=/usr/include +++ GNUSTEP_NETWORK_LIBRARIES=/usr/lib +++ GNUSTEP_NETWORK_DOC=/usr/share/doc/GNUstep +++ GNUSTEP_NETWORK_DOC_MAN=/usr/share/man +++ GNUSTEP_NETWORK_DOC_INFO=/usr/share/info +++ GNUSTEP_LOCAL_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_LOCAL_ADMIN_APPS=/usr/lib/GNUstep/Applications +++ GNUSTEP_LOCAL_WEB_APPS=/usr/lib/GNUstep/WebApplications +++ GNUSTEP_LOCAL_TOOLS=/usr/bin +++ GNUSTEP_LOCAL_ADMIN_TOOLS=/usr/sbin +++ GNUSTEP_LOCAL_LIBRARY=/usr/lib/GNUstep +++ GNUSTEP_LOCAL_HEADERS=/usr/include +++ GNUSTEP_LOCAL_LIBRARIES=/usr/lib +++ GNUSTEP_LOCAL_DOC=/usr/share/doc/GNUstep +++ GNUSTEP_LOCAL_DOC_MAN=/usr/share/man +++ GNUSTEP_LOCAL_DOC_INFO=/usr/share/info +++ GNUSTEP_USER_DIR_APPS=GNUstep/Applications +++ GNUSTEP_USER_DIR_ADMIN_APPS=GNUstep/Applications/Admin +++ GNUSTEP_USER_DIR_WEB_APPS=GNUstep/WebApplications +++ GNUSTEP_USER_DIR_TOOLS=GNUstep/Tools +++ GNUSTEP_USER_DIR_ADMIN_TOOLS=GNUstep/Tools/Admin +++ GNUSTEP_USER_DIR_LIBRARY=GNUstep +++ GNUSTEP_USER_DIR_HEADERS=GNUstep/Headers +++ GNUSTEP_USER_DIR_LIBRARIES=GNUstep/Libraries +++ GNUSTEP_USER_DIR_DOC=GNUstep/Documentation +++ GNUSTEP_USER_DIR_DOC_MAN=GNUstep/Documentation/man +++ GNUSTEP_USER_DIR_DOC_INFO=GNUstep/Documentation/info ++ GNUSTEP_HOME=/usr/src ++ '[' -n .GNUstep.conf ']' ++ case "$GNUSTEP_USER_CONFIG_FILE" in ++ '[' -f /usr/src/.GNUstep.conf ']' ++ '[' yes = yes ']' ++ unset GNUSTEP_SYSTEM_ROOT ++ unset GNUSTEP_LOCAL_ROOT ++ unset GNUSTEP_NETWORK_ROOT ++ '[' yes = yes ']' ++ unset GNUSTEP_FLATTENED ++ GNUSTEP_IS_FLATTENED=yes ++ '[' -z '' ']' ++ LIBRARY_COMBO=gnu-gnu-gnu ++ '[' '!' yes = yes ']' ++ GNUSTEP_HAS_PKGCONFIG=yes ++ '[' -z /usr/share/GNUstep/Makefiles ']' ++ export GNUSTEP_MAKEFILES ++ '[' yes = yes ']' ++ unset GNUSTEP_USER_DIR ++ unset GNUSTEP_USER_ROOT ++ '[' -z '' ']' ++ GNUSTEP_HOST= ++ GNUSTEP_HOST_CPU= ++ GNUSTEP_HOST_VENDOR=alt ++ GNUSTEP_HOST_OS=linux-gnu ++ '[' -z '' ']' +++ pwd ++ tmpdir=/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2 ++ cd /tmp +++ /usr/share/GNUstep/Makefiles/config.guess ++ GNUSTEP_HOST=i686-pc-linux-gnu +++ /usr/share/GNUstep/Makefiles/config.sub i686-pc-linux-gnu ++ GNUSTEP_HOST=i686-pc-linux-gnu ++ cd /usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2 ++ unset tmpdir ++ '[' -z '' ']' +++ /usr/share/GNUstep/Makefiles/cpu.sh i686-pc-linux-gnu ++ GNUSTEP_HOST_CPU=i686 +++ /usr/share/GNUstep/Makefiles/clean_cpu.sh i686 ++ GNUSTEP_HOST_CPU=ix86 ++ '[' -z alt ']' ++ '[' -z linux-gnu ']' ++ '[' '!' yes = yes ']' ++ . /usr/share/GNUstep/Makefiles/filesystem.sh +++ '[' -z /home ']' +++ '[' -z /home ']' +++ '[' -z /home ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/WebApplications ']' +++ '[' -z /usr/bin ']' +++ '[' -z /usr/sbin ']' +++ '[' -z /usr/lib/GNUstep ']' +++ '[' -z /usr/include ']' +++ '[' -z /usr/lib ']' +++ '[' -z /usr/share/doc/GNUstep ']' +++ '[' -z /usr/share/man ']' +++ '[' -z /usr/share/info ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/WebApplications ']' +++ '[' -z /usr/bin ']' +++ '[' -z /usr/sbin ']' +++ '[' -z /usr/lib/GNUstep ']' +++ '[' -z /usr/include ']' +++ '[' -z /usr/lib ']' +++ '[' -z /usr/share/doc/GNUstep ']' +++ '[' -z /usr/share/man ']' +++ '[' -z /usr/share/info ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/Applications ']' +++ '[' -z /usr/lib/GNUstep/WebApplications ']' +++ '[' -z /usr/bin ']' +++ '[' -z /usr/sbin ']' +++ '[' -z /usr/lib/GNUstep ']' +++ '[' -z /usr/include ']' +++ '[' -z /usr/lib ']' +++ '[' -z /usr/share/doc/GNUstep ']' +++ '[' -z /usr/share/man ']' +++ '[' -z /usr/share/info ']' +++ '[' -z GNUstep/Applications ']' +++ '[' -z GNUstep/Applications/Admin ']' +++ '[' -z GNUstep/WebApplications ']' +++ '[' -z GNUstep/Tools ']' +++ '[' -z GNUstep/Tools/Admin ']' +++ '[' -z GNUstep ']' +++ '[' -z GNUstep/Headers ']' +++ '[' -z GNUstep/Libraries ']' +++ '[' -z GNUstep/Documentation ']' +++ '[' -z GNUstep/Documentation/man ']' +++ '[' -z GNUstep/Documentation/info ']' +++ case "${GNUSTEP_USER_DIR_APPS} ${GNUSTEP_USER_DIR_ADMIN_APPS} ${GNUSTEP_USER_DIR_WEB_APPS} ${GNUSTEP_USER_DIR_TOOLS} ${GNUSTEP_USER_DIR_ADMIN_TOOLS} ${GNUSTEP_USER_DIR_LIBRARY} ${GNUSTEP_USER_DIR_HEADERS} ${GNUSTEP_USER_DIR_LIBRARIES} ${GNUSTEP_USER_DIR_DOC} ${GNUSTEP_USER_DIR_DOC_MAN} ${GNUSTEP_USER_DIR_DOC_INFO}" in +++ case "${GNUSTEP_USER_DIR_APPS} ${GNUSTEP_USER_DIR_ADMIN_APPS} ${GNUSTEP_USER_DIR_WEB_APPS} ${GNUSTEP_USER_DIR_TOOLS} ${GNUSTEP_USER_DIR_ADMIN_TOOLS} ${GNUSTEP_USER_DIR_LIBRARY} ${GNUSTEP_USER_DIR_HEADERS} ${GNUSTEP_USER_DIR_LIBRARIES} ${GNUSTEP_USER_DIR_DOC} ${GNUSTEP_USER_DIR_DOC_MAN} ${GNUSTEP_USER_DIR_DOC_INFO}" in +++ case "${GNUSTEP_USER_DIR_APPS} ${GNUSTEP_USER_DIR_ADMIN_APPS} ${GNUSTEP_USER_DIR_WEB_APPS} ${GNUSTEP_USER_DIR_TOOLS} ${GNUSTEP_USER_DIR_ADMIN_TOOLS} ${GNUSTEP_USER_DIR_LIBRARY} ${GNUSTEP_USER_DIR_HEADERS} ${GNUSTEP_USER_DIR_LIBRARIES} ${GNUSTEP_USER_DIR_DOC} ${GNUSTEP_USER_DIR_DOC_MAN} ${GNUSTEP_USER_DIR_DOC_INFO}" in +++ case "$GNUSTEP_USER_DIR_APPS" in +++ GNUSTEP_USER_APPS=/usr/src/GNUstep/Applications +++ unset GNUSTEP_USER_DIR_APPS +++ case "$GNUSTEP_USER_DIR_ADMIN_APPS" in +++ GNUSTEP_USER_ADMIN_APPS=/usr/src/GNUstep/Applications/Admin +++ unset GNUSTEP_USER_DIR_ADMIN_APPS +++ case "$GNUSTEP_USER_DIR_WEB_APPS" in +++ GNUSTEP_USER_WEB_APPS=/usr/src/GNUstep/WebApplications +++ unset GNUSTEP_USER_DIR_WEB_APPS +++ case "$GNUSTEP_USER_DIR_TOOLS" in +++ GNUSTEP_USER_TOOLS=/usr/src/GNUstep/Tools +++ unset GNUSTEP_USER_DIR_TOOLS +++ case "$GNUSTEP_USER_DIR_ADMIN_TOOLS" in +++ GNUSTEP_USER_ADMIN_TOOLS=/usr/src/GNUstep/Tools/Admin +++ unset GNUSTEP_USER_DIR_ADMIN_TOOLS +++ case "$GNUSTEP_USER_DIR_LIBRARY" in +++ GNUSTEP_USER_LIBRARY=/usr/src/GNUstep +++ unset GNUSTEP_USER_DIR_LIBRARY +++ case "$GNUSTEP_USER_DIR_HEADERS" in +++ GNUSTEP_USER_HEADERS=/usr/src/GNUstep/Headers +++ unset GNUSTEP_USER_DIR_HEADERS +++ case "$GNUSTEP_USER_DIR_LIBRARIES" in +++ GNUSTEP_USER_LIBRARIES=/usr/src/GNUstep/Libraries +++ unset GNUSTEP_USER_DIR_LIBRARIES +++ case "$GNUSTEP_USER_DIR_DOC" in +++ GNUSTEP_USER_DOC=/usr/src/GNUstep/Documentation +++ unset GNUSTEP_USER_DIR_DOC +++ case "$GNUSTEP_USER_DIR_DOC_MAN" in +++ GNUSTEP_USER_DOC_MAN=/usr/src/GNUstep/Documentation/man +++ unset GNUSTEP_USER_DIR_DOC_MAN +++ case "$GNUSTEP_USER_DIR_DOC_INFO" in +++ GNUSTEP_USER_DOC_INFO=/usr/src/GNUstep/Documentation/info +++ unset GNUSTEP_USER_DIR_DOC_INFO ++ unset GNUSTEP_HOME ++ fixup_paths=no +++ echo /usr/share/GNUstep/Makefiles +++ sed 's|^[a-zA-Z]:/.*$||' ++ path_check=/usr/share/GNUstep/Makefiles ++ '[' -z /usr/share/GNUstep/Makefiles ']' ++ unset path_check ++ '[' yes = yes ']' ++ unset GNUSTEP_PATHLIST +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep/Tools /usr/bin /usr/bin /usr/bin no ++ GNUSTEP_TOOLS_PATHLIST=/usr/bin:/usr/src/GNUstep/Tools ++ for dir in "$GNUSTEP_SYSTEM_ADMIN_TOOLS" "$GNUSTEP_NETWORK_ADMIN_TOOLS" "$GNUSTEP_LOCAL_ADMIN_TOOLS" "$GNUSTEP_USER_ADMIN_TOOLS" ++ '[' -d /usr/sbin -a -w /usr/sbin ']' ++ for dir in "$GNUSTEP_SYSTEM_ADMIN_TOOLS" "$GNUSTEP_NETWORK_ADMIN_TOOLS" "$GNUSTEP_LOCAL_ADMIN_TOOLS" "$GNUSTEP_USER_ADMIN_TOOLS" ++ '[' -d /usr/sbin -a -w /usr/sbin ']' ++ for dir in "$GNUSTEP_SYSTEM_ADMIN_TOOLS" "$GNUSTEP_NETWORK_ADMIN_TOOLS" "$GNUSTEP_LOCAL_ADMIN_TOOLS" "$GNUSTEP_USER_ADMIN_TOOLS" ++ '[' -d /usr/sbin -a -w /usr/sbin ']' ++ for dir in "$GNUSTEP_SYSTEM_ADMIN_TOOLS" "$GNUSTEP_NETWORK_ADMIN_TOOLS" "$GNUSTEP_LOCAL_ADMIN_TOOLS" "$GNUSTEP_USER_ADMIN_TOOLS" ++ '[' -d /usr/src/GNUstep/Tools/Admin -a -w /usr/src/GNUstep/Tools/Admin ']' ++ old_IFS=' ' ++ IFS=: ++ for dir in $GNUSTEP_TOOLS_PATHLIST ++ '[' yes = no ']' ++ path_fragment=/usr/bin ++ '[' -z /usr/libexec/rpm-build:/usr/src/GNUstep/Tools:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ']' ++ echo :/usr/libexec/rpm-build:/usr/src/GNUstep/Tools:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games: ++ grep -v :/usr/bin: ++ for dir in $GNUSTEP_TOOLS_PATHLIST ++ '[' yes = no ']' ++ path_fragment=/usr/src/GNUstep/Tools ++ '[' -z /usr/libexec/rpm-build:/usr/src/GNUstep/Tools:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ']' ++ grep -v :/usr/src/GNUstep/Tools: ++ echo :/usr/libexec/rpm-build:/usr/src/GNUstep/Tools:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games: ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset path_fragment ++ unset GNUSTEP_TOOLS_PATHLIST ++ export PATH +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep/Libraries /usr/lib /usr/lib /usr/lib no ++ GNUSTEP_LIBRARIES_PATHLIST=/usr/lib:/usr/src/GNUstep/Libraries ++ old_IFS=' ' ++ IFS=: ++ for dir in $GNUSTEP_LIBRARIES_PATHLIST ++ '[' yes = yes ']' ++ path_fragment=/usr/lib ++ case "$GNUSTEP_HOST_OS" in ++ '[' -z /usr/src/GNUstep/Libraries:/usr/lib ']' ++ echo :/usr/src/GNUstep/Libraries:/usr/lib: ++ grep -v :/usr/lib: ++ export LD_LIBRARY_PATH ++ for dir in $GNUSTEP_LIBRARIES_PATHLIST ++ '[' yes = yes ']' ++ path_fragment=/usr/src/GNUstep/Libraries ++ case "$GNUSTEP_HOST_OS" in ++ '[' -z /usr/src/GNUstep/Libraries:/usr/lib ']' ++ echo :/usr/src/GNUstep/Libraries:/usr/lib: ++ grep -v :/usr/src/GNUstep/Libraries: ++ export LD_LIBRARY_PATH ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset path_fragment ++ unset GNUSTEP_LIBRARIES_PATHLIST ++ case "$GNUSTEP_HOST_OS" in +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep /usr/lib/GNUstep /usr/lib/GNUstep /usr/lib/GNUstep no ++ GNUSTEP_LIBRARY_PATHLIST=/usr/lib/GNUstep:/usr/src/GNUstep ++ old_IFS=' ' ++ IFS=: ++ for dir in $GNUSTEP_LIBRARY_PATHLIST ++ path_fragment=/usr/lib/GNUstep/Libraries/Java ++ '[' -z /usr/src/GNUstep/Libraries/Java:/usr/lib/GNUstep/Libraries/Java ']' ++ grep -v :/usr/lib/GNUstep/Libraries/Java: ++ echo :/usr/src/GNUstep/Libraries/Java:/usr/lib/GNUstep/Libraries/Java: ++ path_fragment=/usr/lib/GNUstep/Libraries/Guile ++ '[' -z /usr/src/GNUstep/Libraries/Guile:/usr/lib/GNUstep/Libraries/Guile ']' ++ echo :/usr/src/GNUstep/Libraries/Guile:/usr/lib/GNUstep/Libraries/Guile: ++ grep -v :/usr/lib/GNUstep/Libraries/Guile: ++ for dir in $GNUSTEP_LIBRARY_PATHLIST ++ path_fragment=/usr/src/GNUstep/Libraries/Java ++ '[' -z /usr/src/GNUstep/Libraries/Java:/usr/lib/GNUstep/Libraries/Java ']' ++ echo :/usr/src/GNUstep/Libraries/Java:/usr/lib/GNUstep/Libraries/Java: ++ grep -v :/usr/src/GNUstep/Libraries/Java: ++ path_fragment=/usr/src/GNUstep/Libraries/Guile ++ '[' -z /usr/src/GNUstep/Libraries/Guile:/usr/lib/GNUstep/Libraries/Guile ']' ++ echo :/usr/src/GNUstep/Libraries/Guile:/usr/lib/GNUstep/Libraries/Guile: ++ grep -v :/usr/src/GNUstep/Libraries/Guile: ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset path_fragment ++ unset GNUSTEP_LIBRARY_PATHLIST ++ export CLASSPATH ++ export GUILE_LOAD_PATH +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep/Documentation/info /usr/share/info /usr/share/info /usr/share/info no ++ GNUSTEP_INFO_PATHLIST=/usr/share/info:/usr/src/GNUstep/Documentation/info ++ old_IFS=' ' ++ IFS=: ++ for dir in $GNUSTEP_INFO_PATHLIST ++ '[' -z /usr/share/info::/usr/src/GNUstep/Documentation/info: ']' ++ echo :/usr/share/info::/usr/src/GNUstep/Documentation/info:: ++ grep -v :/usr/share/info: ++ for dir in $GNUSTEP_INFO_PATHLIST ++ '[' -z /usr/share/info::/usr/src/GNUstep/Documentation/info: ']' ++ echo :/usr/share/info::/usr/src/GNUstep/Documentation/info:: ++ grep -v :/usr/src/GNUstep/Documentation/info: ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset GNUSTEP_INFO_PATHLIST ++ export INFOPATH ++ '[' yes = yes ']' +++ /usr/share/GNUstep/Makefiles/print_unique_pathlist.sh /usr/src/GNUstep/Libraries /usr/lib /usr/lib /usr/lib no ++ GNUSTEP_PKGCONFIG_PATHLIST=/usr/lib:/usr/src/GNUstep/Libraries ++ old_IFS=' ' ++ IFS=: ++ GNUSTEP_PKGCONFIG_FRAGMENT=pkgconfig ++ for dir in $GNUSTEP_PKGCONFIG_PATHLIST ++ '[' yes = yes ']' ++ path_fragment=/usr/lib/pkgconfig ++ '[' -z /usr/src/GNUstep/Libraries/pkgconfig:/usr/lib/pkgconfig ']' ++ grep -v :/usr/lib/pkgconfig: ++ echo :/usr/src/GNUstep/Libraries/pkgconfig:/usr/lib/pkgconfig: ++ export PKG_CONFIG_PATH ++ for dir in $GNUSTEP_PKGCONFIG_PATHLIST ++ '[' yes = yes ']' ++ path_fragment=/usr/src/GNUstep/Libraries/pkgconfig ++ '[' -z /usr/src/GNUstep/Libraries/pkgconfig:/usr/lib/pkgconfig ']' ++ echo :/usr/src/GNUstep/Libraries/pkgconfig:/usr/lib/pkgconfig: ++ grep -v :/usr/src/GNUstep/Libraries/pkgconfig: ++ export PKG_CONFIG_PATH ++ IFS=' ' ++ unset old_IFS ++ unset dir ++ unset path_fragment ++ unset GNUSTEP_PKGCONFIG_FRAGMENT ++ unset GNUSTEP_PKGCONFIG_PATHLIST ++ unset GNUSTEP_HAS_PKGCONFIG ++ '[' -n '' ']' ++ '[' yes = yes ']' ++ unset GNUSTEP_IS_FLATTENED ++ unset LIBRARY_COMBO ++ unset GNUSTEP_HOST ++ unset GNUSTEP_HOST_CPU ++ unset GNUSTEP_HOST_VENDOR ++ unset GNUSTEP_HOST_OS ++ unset GNUSTEP_MAKE_STRICT_V2_MODE ++ '[' -z '' ']' ++ unset GNUSTEP_CONFIG_FILE ++ unset GNUSTEP_KEEP_CONFIG_FILE ++ '[' -z '' ']' ++ unset GNUSTEP_USER_CONFIG_FILE ++ unset GNUSTEP_KEEP_USER_CONFIG_FILE ++ unset GNUSTEP_USER_DEFAULTS_DIR ++ unset GNUSTEP_SYSTEM_APPS ++ unset GNUSTEP_SYSTEM_ADMIN_APPS ++ unset GNUSTEP_SYSTEM_WEB_APPS ++ unset GNUSTEP_SYSTEM_TOOLS ++ unset GNUSTEP_SYSTEM_ADMIN_TOOLS ++ unset GNUSTEP_SYSTEM_LIBRARY ++ unset GNUSTEP_SYSTEM_HEADERS ++ unset GNUSTEP_SYSTEM_LIBRARIES ++ unset GNUSTEP_SYSTEM_DOC ++ unset GNUSTEP_SYSTEM_DOC_MAN ++ unset GNUSTEP_SYSTEM_DOC_INFO ++ unset GNUSTEP_NETWORK_APPS ++ unset GNUSTEP_NETWORK_ADMIN_APPS ++ unset GNUSTEP_NETWORK_WEB_APPS ++ unset GNUSTEP_NETWORK_TOOLS ++ unset GNUSTEP_NETWORK_ADMIN_TOOLS ++ unset GNUSTEP_NETWORK_LIBRARY ++ unset GNUSTEP_NETWORK_HEADERS ++ unset GNUSTEP_NETWORK_LIBRARIES ++ unset GNUSTEP_NETWORK_DOC ++ unset GNUSTEP_NETWORK_DOC_MAN ++ unset GNUSTEP_NETWORK_DOC_INFO ++ unset GNUSTEP_LOCAL_APPS ++ unset GNUSTEP_LOCAL_ADMIN_APPS ++ unset GNUSTEP_LOCAL_WEB_APPS ++ unset GNUSTEP_LOCAL_TOOLS ++ unset GNUSTEP_LOCAL_ADMIN_TOOLS ++ unset GNUSTEP_LOCAL_LIBRARY ++ unset GNUSTEP_LOCAL_HEADERS ++ unset GNUSTEP_LOCAL_LIBRARIES ++ unset GNUSTEP_LOCAL_DOC ++ unset GNUSTEP_LOCAL_DOC_MAN ++ unset GNUSTEP_LOCAL_DOC_INFO ++ unset GNUSTEP_USER_APPS ++ unset GNUSTEP_USER_ADMIN_APPS ++ unset GNUSTEP_USER_WEB_APPS ++ unset GNUSTEP_USER_TOOLS ++ unset GNUSTEP_USER_ADMIN_TOOLS ++ unset GNUSTEP_USER_LIBRARY ++ unset GNUSTEP_USER_HEADERS ++ unset GNUSTEP_USER_LIBRARIES ++ unset GNUSTEP_USER_DOC ++ unset GNUSTEP_USER_DOC_MAN ++ unset GNUSTEP_USER_DOC_INFO ++ unset GNUSTEP_SYSTEM_USERS_DIR ++ unset GNUSTEP_LOCAL_USERS_DIR ++ unset GNUSTEP_NETWORK_USERS_DIR ++ '[' -n '' ']' + make 'INSTALL=/usr/libexec/rpm-build/install -p' install DESTDIR=/usr/src/tmp/gnustep-BioCocoa-buildroot GNUSTEP_INSTALLATION_DOMAIN=SYSTEM make: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2' This is gnustep-make 2.7.0. Type 'gmake print-gnustep-make-help' for help. Running in gnustep-make version 2 strict mode. make: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2' make: Entering directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2' Making build-headers in subprojects of framework BioCocoa... Making build-headers in subprojects of subproject BCFoundation... Making build-headers for subproject BCAlignment... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCAnalysis... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCGeneExpression... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCGeneticCode... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCProteinStructure... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCSequence... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCSequenceIO... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCSymbol... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCTools... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCUtils... gmake[3]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for subproject BCFoundation... gmake[2]: Nothing to be done for 'internal-subproject-build-headers'. Making build-headers for framework BioCocoa... Making all in subprojects of framework BioCocoa... Making all in subprojects of subproject BCFoundation... Making all for subproject BCAlignment... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCAnalysis... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCGeneExpression... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCGeneticCode... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCProteinStructure... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCSequence... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCSequenceIO... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCSymbol... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCTools... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCUtils... gmake[4]: Nothing to be done for 'internal-subproject-compile'. Making all for subproject BCFoundation... gmake[3]: Nothing to be done for 'internal-subproject-compile'. Making all for framework BioCocoa... gmake[2]: Nothing to be done for 'internal-framework-compile'. Copying resources into the framework wrapper... Copying resources from subprojects into the framework wrapper... Making install in subprojects of framework BioCocoa... Making install in subprojects of subproject BCFoundation... Making install for subproject BCAlignment... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCAnalysis... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCGeneExpression... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCGeneticCode... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCProteinStructure... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCSequence... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCSequenceIO... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCSymbol... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCTools... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCUtils... gmake[3]: Nothing to be done for 'internal-subproject-install'. Making install for subproject BCFoundation... gmake[2]: Nothing to be done for 'internal-subproject-install'. Making install for framework BioCocoa... Creating /usr/src/tmp/gnustep-BioCocoa-buildroot//usr/lib/GNUstep/Frameworks... Creating /usr/src/tmp/gnustep-BioCocoa-buildroot//usr/include... Installing framework BioCocoa... Installing headers... make: Leaving directory '/usr/src/RPM/BUILD/gnustep-BioCocoa-2.2.2' + pushd /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib ~/tmp/gnustep-BioCocoa-buildroot/usr/lib ~/RPM/BUILD/gnustep-BioCocoa-2.2.2 + for j in BioCocoa + for i in lib$j.so* + rm -f libBioCocoa.so + mv GNUstep/Frameworks/BioCocoa.framework/Versions/Current/libBioCocoa.so ./ + for k in lib$j.so.*.* + ln -s /usr/lib/libBioCocoa.so.2.2.2 GNUstep/Frameworks/BioCocoa.framework/Versions/Current/libBioCocoa.so + rm GNUstep/Frameworks/BioCocoa.framework/Versions/Current/BioCocoa + ln -s /usr/lib/libBioCocoa.so.2.2.2 GNUstep/Frameworks/BioCocoa.framework/Versions/Current/BioCocoa + for i in lib$j.so* + rm -f libBioCocoa.so.2 + mv GNUstep/Frameworks/BioCocoa.framework/Versions/Current/libBioCocoa.so.2 ./ + for k in lib$j.so.*.* + ln -s /usr/lib/libBioCocoa.so.2.2.2 GNUstep/Frameworks/BioCocoa.framework/Versions/Current/libBioCocoa.so.2 + rm GNUstep/Frameworks/BioCocoa.framework/Versions/Current/BioCocoa + ln -s /usr/lib/libBioCocoa.so.2.2.2 GNUstep/Frameworks/BioCocoa.framework/Versions/Current/BioCocoa + for i in lib$j.so* + rm -f libBioCocoa.so.2.2.2 + mv GNUstep/Frameworks/BioCocoa.framework/Versions/Current/libBioCocoa.so.2.2.2 ./ + for k in lib$j.so.*.* + ln -s /usr/lib/libBioCocoa.so.2.2.2 GNUstep/Frameworks/BioCocoa.framework/Versions/Current/libBioCocoa.so.2.2.2 + rm GNUstep/Frameworks/BioCocoa.framework/Versions/Current/BioCocoa + ln -s /usr/lib/libBioCocoa.so.2.2.2 GNUstep/Frameworks/BioCocoa.framework/Versions/Current/BioCocoa + popd ~/RPM/BUILD/gnustep-BioCocoa-2.2.2 + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/gnustep-BioCocoa-buildroot (auto) mode of './usr/lib/libBioCocoa.so.2.2.2' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/gnustep-BioCocoa-buildroot (binconfig,pkgconfig,libtool,desktop,gnuconfig) Checking contents of files in /usr/src/tmp/gnustep-BioCocoa-buildroot/ (default) Compressing files in /usr/src/tmp/gnustep-BioCocoa-buildroot (auto) Adjusting library links in /usr/src/tmp/gnustep-BioCocoa-buildroot ./usr/lib: (from :0) libBioCocoa.so.2 -> libBioCocoa.so.2.2.2 Verifying ELF objects in /usr/src/tmp/gnustep-BioCocoa-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=strict) verify-elf: WARNING: ./usr/lib/libBioCocoa.so.2.2.2: uses non-LFS functions: fgetpos fopen fseeko fsetpos ftello Processing files: gnustep-BioCocoa-2.2.2-alt4 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.77574 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd gnustep-BioCocoa-2.2.2 + DOCDIR=/usr/src/tmp/gnustep-BioCocoa-buildroot/usr/share/doc/gnustep-BioCocoa-2.2.2 + export DOCDIR + rm -rf /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/share/doc/gnustep-BioCocoa-2.2.2 + /bin/mkdir -p /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/share/doc/gnustep-BioCocoa-2.2.2 + cp -prL ChangeLog Authors.txt Publications.txt Readme.txt license.txt /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/share/doc/gnustep-BioCocoa-2.2.2 + chmod -R go-w /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/share/doc/gnustep-BioCocoa-2.2.2 + chmod -R a+rX /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/share/doc/gnustep-BioCocoa-2.2.2 + exit 0 warning: Symlink /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/BioCocoa destination changed from ./Versions/Current/BioCocoa to Versions/Current/BioCocoa warning: absolute symlink: /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/BioCocoa -> /usr/lib/libBioCocoa.so.2.2.2 warning: absolute symlink: /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so -> /usr/lib/libBioCocoa.so.2.2.2 warning: absolute symlink: /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so.2 -> /usr/lib/libBioCocoa.so.2.2.2 warning: absolute symlink: /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so.2.2.2 -> /usr/lib/libBioCocoa.so.2.2.2 warning: Symlink /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/libBioCocoa.so destination changed from ./Versions/Current/libBioCocoa.so to Versions/Current/libBioCocoa.so Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.zL1obN find-provides: broken symbolic link /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/BioCocoa -> ./Versions/Current/BioCocoa is not going to provide anything find-provides: absolute symbolic link /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/BioCocoa -> /usr/lib/libBioCocoa.so.2.2.2 is not going to provide anything find-provides: absolute symbolic link /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so -> /usr/lib/libBioCocoa.so.2.2.2 is not going to provide anything find-provides: absolute symbolic link /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so.2 -> /usr/lib/libBioCocoa.so.2.2.2 is not going to provide anything find-provides: absolute symbolic link /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/libBioCocoa.so.2.2.2 -> /usr/lib/libBioCocoa.so.2.2.2 is not going to provide anything find-provides: broken symbolic link /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/libBioCocoa.so -> ./Versions/Current/libBioCocoa.so is not going to provide anything find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Lv9rVL find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services) Requires: libgnustep-BioCocoa = 2.2.2-alt4, gnustep-back, /usr/lib/libBioCocoa.so.2.2.2 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.GguotL Processing files: libgnustep-BioCocoa-2.2.2-alt4 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.B4zuoL find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) lib.prov: /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/libBioCocoa.so.2: 86 symbols, 17 bpp Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.ELKvIM find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services) Provides: libBioCocoa.so.2 = set:kdZiyFAWQFi5YFzHqxdrZHOIBCofiteGdzRQZvrTfe6RZgbDcNmhYw2Z0GjkR7iSUZk4euTMZwfJsGTdjN0l296oruBRgYDGt77V8WPkBT8uLFvQp4PTnoGlTrZmikhNdqLPsrqaDA9AkZbOY9dZ0hKmv35mTnslZ9R3yKhRG2bNZa6M22 Requires: libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.2), libc.so.6(GLIBC_2.3), libc.so.6(GLIBC_2.3.4), libc.so.6(GLIBC_2.4), libgcc_s.so.1(GCC_3.0), libgnustep-base.so.1.28 >= set:oj2p34SjSbHAMwqPopICD53lKzH8gTFWKApioF4rkAn2cgFixCRBGn3lweTTGVMvOSSoHIZjmhEm1Kgv0Uxyl1TschbKp, libobjc.so.4 >= set:li4zK2eSsZEQS80qqM4, rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.5tRzcN Creating libgnustep-BioCocoa-debuginfo package Processing files: libgnustep-BioCocoa-devel-2.2.2-alt4 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.S4jPlK find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,python3,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.nQbUnN find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services) /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/Headers/BCFoundation.h:107:9: fatal error: BioCocoa/BCGeneExpressionOmnibus.h: No such file or directory 107 | #import | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ compilation terminated. cpp.req: /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/Headers/BCFoundation.h: cpp failed, trying c++ mode i586-alt-linux-cpp: fatal error: cannot execute 'cc1plus': execvp: No such file or directory compilation terminated. cpp.req: WARNING: /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/Headers/BCFoundation.h: cpp failed /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/Headers/BCPairwiseAlignment.h:33:9: fatal error: BCAlignment.h: No such file or directory 33 | #import "BCAlignment.h" | ^~~~~~~~~~~~~~~ compilation terminated. cpp.req: WARNING: /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/Headers/BCPairwiseAlignment.h: cpp failed /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/Headers/BCStringDefinitions.h:36:9: fatal error: BCInternal.h: No such file or directory 36 | #import "BCInternal.h" | ^~~~~~~~~~~~~~ compilation terminated. cpp.req: WARNING: /usr/src/tmp/gnustep-BioCocoa-buildroot/usr/lib/GNUstep/Frameworks/BioCocoa.framework/Versions/2/Headers/BCStringDefinitions.h: cpp failed Provides: gnustep-BioCocoa-devel = 2.2.2-alt4 Requires: gnustep-BioCocoa = 2.2.2-alt4, libgnustep-BioCocoa = 2.2.2-alt4, /usr/lib/libBioCocoa.so.2, gnustep-base-devel Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.COsdrN Processing files: libgnustep-BioCocoa-debuginfo-2.2.2-alt4 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.HLTJAL find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.iu3RQM find-requires: running scripts (debuginfo) Provides: debug(libBioCocoa.so.2) Requires: libgnustep-BioCocoa = 2.2.2-alt4, debug(libc.so.6), debug(libgcc_s.so.1), debug(libgnustep-base.so.1.28), debug(libobjc.so.4) Adding to gnustep-BioCocoa a strict dependency on libgnustep-BioCocoa Adding to libgnustep-BioCocoa-devel a strict dependency on gnustep-BioCocoa Adding to libgnustep-BioCocoa-devel a strict dependency on libgnustep-BioCocoa Adding to libgnustep-BioCocoa-debuginfo a strict dependency on libgnustep-BioCocoa Removing 1 extra deps from gnustep-BioCocoa due to dependency on libgnustep-BioCocoa Removing 1 extra deps from libgnustep-BioCocoa-devel due to dependency on libgnustep-BioCocoa Removing 1 extra deps from libgnustep-BioCocoa-devel due to repentancy on gnustep-BioCocoa Wrote: /usr/src/RPM/RPMS/i586/gnustep-BioCocoa-2.2.2-alt4.i586.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/i586/libgnustep-BioCocoa-2.2.2-alt4.i586.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/i586/libgnustep-BioCocoa-devel-2.2.2-alt4.i586.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/i586/libgnustep-BioCocoa-debuginfo-2.2.2-alt4.i586.rpm (w2.lzdio) 27.78user 6.40system 1:16.62elapsed 44%CPU (0avgtext+0avgdata 46928maxresident)k 0inputs+0outputs (0major+2179734minor)pagefaults 0swaps 42.61user 9.62system 1:53.79elapsed 45%CPU (0avgtext+0avgdata 104480maxresident)k 0inputs+0outputs (0major+2661443minor)pagefaults 0swaps --- libgnustep-BioCocoa-2.2.2-alt4.i586.rpm.repo 2021-06-11 18:00:18.000000000 +0000 +++ libgnustep-BioCocoa-2.2.2-alt4.i586.rpm.hasher 2021-07-13 12:43:07.052106041 +0000 @@ -17,2 +17,2 @@ Provides: libgnustep-BioCocoa = 2.2.2-alt4:sisyphus+274273.1000.10.1 -RPMIdentity: ce3605fc6cd4a66016452665e0f611db +RPMIdentity: 25a38f9c5376c3734fab1ff10c08e312 --- libgnustep-BioCocoa-debuginfo-2.2.2-alt4.i586.rpm.repo 2021-06-11 18:00:18.000000000 +0000 +++ libgnustep-BioCocoa-debuginfo-2.2.2-alt4.i586.rpm.hasher 2021-07-13 12:43:07.263106730 +0000 @@ -1,4 +1,4 @@ -/usr/lib/debug/.build-id/42 40755 -/usr/lib/debug/.build-id/42/a2076794f68daca8518497248e0eb52ed7bad1 120777 ../../../libBioCocoa.so.2.2.2 -/usr/lib/debug/.build-id/42/a2076794f68daca8518497248e0eb52ed7bad1.debug 120777 ../../usr/lib/libBioCocoa.so.2.2.2.debug +/usr/lib/debug/.build-id/34 40755 +/usr/lib/debug/.build-id/34/c8dc4c629818cc90996f9a4e9d9c42ab873153 120777 ../../../libBioCocoa.so.2.2.2 +/usr/lib/debug/.build-id/34/c8dc4c629818cc90996f9a4e9d9c42ab873153.debug 120777 ../../usr/lib/libBioCocoa.so.2.2.2.debug /usr/lib/debug/usr/lib/libBioCocoa.so.2.2.2.debug 100644 @@ -118,2 +118,2 @@ Provides: libgnustep-BioCocoa-debuginfo = 2.2.2-alt4:sisyphus+274273.1000.10.1 -RPMIdentity: 2c7a9b0ae5211dde45141ece55771cce +RPMIdentity: 85fd86744a0ddad54bc5ee6d98786d08