<86>May 24 12:43:54 userdel[540037]: delete user 'rooter'
<86>May 24 12:43:54 groupadd[540044]: group added to /etc/group: name=rooter, GID=624
<86>May 24 12:43:54 groupadd[540044]: group added to /etc/gshadow: name=rooter
<86>May 24 12:43:54 groupadd[540044]: new group: name=rooter, GID=624
<86>May 24 12:43:54 useradd[540051]: new user: name=rooter, UID=624, GID=624, home=/root, shell=/bin/bash
<86>May 24 12:43:54 userdel[540067]: delete user 'builder'
<86>May 24 12:43:54 userdel[540067]: removed group 'builder' owned by 'builder'
<86>May 24 12:43:54 userdel[540067]: removed shadow group 'builder' owned by 'builder'
<86>May 24 12:43:54 groupadd[540072]: group added to /etc/group: name=builder, GID=625
<86>May 24 12:43:54 groupadd[540072]: group added to /etc/gshadow: name=builder
<86>May 24 12:43:55 groupadd[540072]: new group: name=builder, GID=625
<86>May 24 12:43:55 useradd[540076]: new user: name=builder, UID=625, GID=625, home=/usr/src, shell=/bin/bash
warning: user user does not exist - using root
warning: group user does not exist - using root
warning: user user does not exist - using root
warning: group user does not exist - using root
warning: user user does not exist - using root
warning: group user does not exist - using root
warning: user user does not exist - using root
warning: group user does not exist - using root
<13>May 24 12:44:03 rpmi: xorg-proto-devel-2021.4-alt1 sisyphus+272146.100.1.1 1621424691 installed
<13>May 24 12:44:03 rpmi: libglvnd-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed
<13>May 24 12:44:03 rpmi: libexpat-2.2.10-alt1 sisyphus+259966.100.1.1 1602824518 installed
<13>May 24 12:44:03 rpmi: libpng16-1.6.37-alt1 sisyphus+236677.100.2.1 1566917998 installed
<13>May 24 12:44:03 rpmi: libjpeg-2:2.0.6-alt1 sisyphus+266888.100.1.1 1614172387 installed
<13>May 24 12:44:03 rpmi: libXau-1.0.9-alt1 sisyphus+223149.200.2.1 1551268152 installed
<13>May 24 12:44:03 rpmi: libwayland-server-1.19.0-alt1 sisyphus+265427.100.1.1 1611852858 installed
<13>May 24 12:44:05 rpmi: libicu67-1:6.7.1-alt2 sisyphus+252432.100.2.2 1590796126 installed
<13>May 24 12:44:05 rpmi: libgraphite2-1.3.14-alt2 sisyphus+250009.100.1.1 1586943065 installed
<13>May 24 12:44:05 rpmi: libgraphite2-devel-1.3.14-alt2 sisyphus+250009.100.1.1 1586943065 installed
<13>May 24 12:44:05 rpmi: icu-utils-1:6.7.1-alt2 sisyphus+252432.100.2.2 1590796126 installed
<13>May 24 12:44:05 rpmi: libicu-devel-1:6.7.1-alt2 sisyphus+252432.100.2.2 1590796126 installed
<13>May 24 12:44:05 rpmi: libXau-devel-1.0.9-alt1 sisyphus+223149.200.2.1 1551268152 installed
<13>May 24 12:44:05 rpmi: libOpenGL-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed
<13>May 24 12:44:05 rpmi: libGLES-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed
<13>May 24 12:44:05 rpmi: zlib-devel-1.2.11-alt1 sisyphus+221902.6000.4.1 1550601058 installed
<13>May 24 12:44:05 rpmi: libtinfo-devel-6.2.20210123-alt1 sisyphus+265425.100.1.1 1611851433 installed
<13>May 24 12:44:06 rpmi: libncurses-devel-6.2.20210123-alt1 sisyphus+265425.100.1.1 1611851433 installed
<13>May 24 12:44:06 rpmi: libxshmfence-1.3-alt1 sisyphus+223149.1000.2.1 1551268571 installed
<13>May 24 12:44:06 rpmi: libX11-locales-3:1.7.1-alt1 sisyphus+272146.200.1.1 1621424771 installed
<13>May 24 12:44:06 rpmi: libXdmcp-1.1.3-alt1 sisyphus+225206.600.1.2 1552949353 installed
<13>May 24 12:44:06 rpmi: libxcb-1.14-alt1 sisyphus+247358.200.1.3 1583854228 installed
<13>May 24 12:44:06 rpmi: libX11-3:1.7.1-alt1 sisyphus+272146.200.1.1 1621424825 installed
<13>May 24 12:44:06 rpmi: libXext-1.3.4-alt1 sisyphus+225206.700.1.2 1552949429 installed
<13>May 24 12:44:06 rpmi: libXfixes-5.0.3-alt1 sisyphus+226736.100.2.2 1554614841 installed
<13>May 24 12:44:06 rpmi: libXrender-0.9.10-alt1 sisyphus+261890.100.1.1 1605595177 installed
<13>May 24 12:44:06 rpmi: libXcursor-1.2.0-alt1 sisyphus+225206.400.1.2 1552949218 installed
<13>May 24 12:44:06 rpmi: libXinerama-1.1.4-alt1 sisyphus+223149.300.2.1 1551268216 installed
<13>May 24 12:44:06 rpmi: libXxf86vm-1.1.4-alt2 1527672187 installed
<13>May 24 12:44:14 rpmi: libxcb-devel-1.14-alt1 sisyphus+247358.200.1.3 1583854228 installed
<13>May 24 12:44:14 rpmi: libX11-devel-3:1.7.1-alt1 sisyphus+272146.200.1.1 1621424825 installed
<13>May 24 12:44:14 rpmi: libXrender-devel-0.9.10-alt1 sisyphus+261890.100.1.1 1605595177 installed
<13>May 24 12:44:14 rpmi: libwayland-client-1.19.0-alt1 sisyphus+265427.100.1.1 1611852858 installed
<13>May 24 12:44:14 rpmi: libpciaccess-1:0.16-alt1 sisyphus+234814.100.1.1 1563438291 installed
<13>May 24 12:44:14 rpmi: libdrm-1:2.4.106-alt1 sisyphus+272066.100.1.1 1621322230 installed
<13>May 24 12:44:14 rpmi: libGLX-mesa-4:21.1.1-alt1 sisyphus+272309.100.1.1 1621584296 installed
<13>May 24 12:44:14 rpmi: libGLX-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed
<13>May 24 12:44:14 rpmi: libGL-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed
<13>May 24 12:44:15 rpmi: libGLU-4:9.0.1-alt1 sisyphus+248864.100.1.1 1585556461 installed
<13>May 24 12:44:15 rpmi: libgbm-4:21.1.1-alt1 sisyphus+272309.100.1.1 1621584296 installed
<13>May 24 12:44:15 rpmi: libEGL-mesa-4:21.1.1-alt1 sisyphus+272309.100.1.1 1621584296 installed
<13>May 24 12:44:15 rpmi: libEGL-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed
<13>May 24 12:44:15 rpmi: libglvnd-devel-7:1.3.3-alt1 sisyphus+271643.100.1.1 1620829930 installed
<13>May 24 12:44:15 rpmi: libGL-devel-4:21.1.1-alt1 sisyphus+272309.100.1.1 1621584296 installed
<13>May 24 12:44:15 rpmi: libGLU-devel-4:9.0.1-alt1 sisyphus+248864.100.1.1 1585556461 installed
<13>May 24 12:44:15 rpmi: gcc-c++-common-1.4.27-alt1 sisyphus+262033.600.7.2 1607340230 installed
<13>May 24 12:44:16 rpmi: libstdc++10-devel-10.2.1-alt3 sisyphus+267829.100.1.1 1615808579 installed
<13>May 24 12:44:18 rpmi: gcc10-c++-10.2.1-alt3 sisyphus+267829.100.1.1 1615808579 installed
<13>May 24 12:44:18 rpmi: libbrotlicommon-1.0.9-alt2 sisyphus+257777.100.1.1 1599688017 installed
<13>May 24 12:44:18 rpmi: libbrotlidec-1.0.9-alt2 sisyphus+257777.100.1.1 1599688017 installed
<13>May 24 12:44:19 rpmi: libharfbuzz-2.8.1-alt1 sisyphus+271208.140.6.1 1620770336 installed
<13>May 24 12:44:19 rpmi: libfreetype-2.10.4-alt2 sisyphus+260293.100.2.1 1604479496 installed
<13>May 24 12:44:19 rpmi: fontconfig-2.13.1-alt1 sisyphus+257555.100.1.1 1599475160 installed
Updating fonts cache: <29>May 24 12:44:20 fontconfig: Updating fonts cache: succeeded
[ DONE ]
<13>May 24 12:44:20 rpmi: libXft-2.3.3-alt1 sisyphus+225206.1000.3.2 1552987708 installed
<13>May 24 12:44:20 rpmi: libfltk13-1.3.5-alt0.1.rc1 sisyphus+221936.100.1.1 1550500973 installed
<13>May 24 12:44:20 rpmi: libharfbuzz-icu-2.8.1-alt1 sisyphus+271208.140.6.1 1620770336 installed
<13>May 24 12:44:20 rpmi: libharfbuzz-gobject-2.8.1-alt1 sisyphus+271208.140.6.1 1620770336 installed
<13>May 24 12:44:20 rpmi: libgdbm-1.8.3-alt10 1454943334 installed
<13>May 24 12:44:20 rpmi: xml-utils-1:2.9.10-alt6 sisyphus+265234.30740.49.1 1613765060 installed
<13>May 24 12:44:20 rpmi: rpm-build-gir-0.7.3-alt3 sisyphus+242150.100.1.1 1575312005 installed
<13>May 24 12:44:20 rpmi: libp11-kit-0.23.15-alt2 sisyphus+252784.100.2.2 1591274901 installed
<13>May 24 12:44:20 rpmi: libtasn1-4.16.0-alt1 sisyphus+245480.100.1.1 1580825062 installed
<13>May 24 12:44:20 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed
<13>May 24 12:44:20 rpmi: alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed
<13>May 24 12:44:21 rpmi: ca-certificates-2021.03.24-alt1 sisyphus+268304.300.1.1 1616591829 installed
<13>May 24 12:44:21 rpmi: ca-trust-0.1.2-alt1 sisyphus+233348.100.1.1 1561653823 installed
<13>May 24 12:44:21 rpmi: p11-kit-trust-0.23.15-alt2 sisyphus+252784.100.2.2 1591274901 installed
<13>May 24 12:44:21 rpmi: libcrypto1.1-1.1.1k-alt1 sisyphus+268375.100.1.1 1616684255 installed
<13>May 24 12:44:21 rpmi: libssl1.1-1.1.1k-alt1 sisyphus+268375.100.1.1 1616684255 installed
<13>May 24 12:44:21 rpmi: libpython3-3.9.5-alt1 sisyphus+271461.100.1.1 1620748853 installed
<13>May 24 12:44:21 rpmi: python3-3.9.5-alt1 sisyphus+271461.100.1.1 1620748853 installed
<13>May 24 12:44:24 rpmi: python3-base-3.9.5-alt1 sisyphus+271461.100.1.1 1620748853 installed
<13>May 24 12:44:25 rpmi: glib2-devel-2.68.2-alt1 sisyphus+271208.74.6.1 1620769878 installed
<13>May 24 12:44:25 rpmi: libfreetype-devel-2.10.4-alt2 sisyphus+260293.100.2.1 1604479496 installed
<13>May 24 12:44:25 rpmi: libharfbuzz-devel-2.8.1-alt1 sisyphus+271208.140.6.1 1620770336 installed
<13>May 24 12:44:25 rpmi: fontconfig-devel-2.13.1-alt1 sisyphus+257555.100.1.1 1599475160 installed
<13>May 24 12:44:25 rpmi: tests-for-installed-python3-pkgs-0.1.17-alt1 sisyphus+271082.100.1.1 1619820927 installed
<13>May 24 12:44:25 rpmi: rpm-build-python3-0.1.17-alt1 sisyphus+271082.100.1.1 1619820927 installed
<13>May 24 12:44:25 rpmi: python3-dev-3.9.5-alt1 sisyphus+271461.100.1.1 1620748853 installed
<13>May 24 12:44:25 rpmi: libXft-devel-2.3.3-alt1 sisyphus+225206.1000.3.2 1552987708 installed
<13>May 24 12:44:25 rpmi: libfltk-devel-1.3.5-alt0.1.rc1 sisyphus+221936.100.1.1 1550500973 installed
<13>May 24 12:44:25 rpmi: gcc-c++-10-alt1 sisyphus+263054.200.3.1 1607516810 installed
<13>May 24 12:44:25 rpmi: libXcursor-devel-1.2.0-alt1 sisyphus+225206.400.1.2 1552949218 installed
<13>May 24 12:44:25 rpmi: libXext-devel-1.3.4-alt1 sisyphus+225206.700.1.2 1552949429 installed
<13>May 24 12:44:25 rpmi: libXfixes-devel-5.0.3-alt1 sisyphus+226736.100.2.2 1554614841 installed
<13>May 24 12:44:25 rpmi: libXinerama-devel-1.1.4-alt1 sisyphus+223149.300.2.1 1551268216 installed
<13>May 24 12:44:25 rpmi: libpng-devel-1.6.37-alt1 sisyphus+236677.100.2.1 1566917998 installed
<13>May 24 12:44:25 rpmi: libjpeg-devel-2:2.0.6-alt1 sisyphus+266888.100.1.1 1614172387 installed
Building target platforms: i586
Building for target i586
Wrote: /usr/src/in/nosrpm/seaview-5.0-alt1.nosrc.rpm (w1.gzdio)
Installing seaview-5.0-alt1.src.rpm
Building target platforms: i586
Building for target i586
Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.882
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ rm -rf seaview
+ echo 'Source #0 (seaview_5.0.tar.gz):'
Source #0 (seaview_5.0.tar.gz):
+ /bin/gzip -dc /usr/src/RPM/SOURCES/seaview_5.0.tar.gz
+ /bin/tar -xf -
+ cd seaview
+ /bin/chmod -c -Rf u+rwX,go-w .
+ echo 'Patch #0 (seaview-chris.patch):'
Patch #0 (seaview-chris.patch):
+ /usr/bin/patch -p1 -b --suffix .chris
patching file csrc/dnapars.c
patching file csrc/phylip.c
patching file csrc/phylip.h
patching file csrc/protpars.c
patching file Makefile
+ chmod -x addbootstrap.cxx align.cxx comlines.cxx concatenate.cxx custom.cxx least_squares_brl.cxx load_seq.cxx nexus.cxx pdf_or_ps.cxx pseudoterminal.cxx racnuc_fetch.cxx regions.cxx resource.cxx seaview.cxx statistics.cxx svg.cxx tbe.cxx threads.cxx treedraw.cxx treerecs_draw.cxx trees.cxx unrooted.cxx use_mase_files.cxx viewasprots.cxx win32_extras.cxx xfmatpt.cxx
+ chmod -x csrc/bionj.c csrc/dnapars.c csrc/lwl.c csrc/md5.c csrc/misc_acnuc.c csrc/parser.c csrc/parser.h csrc/phylip.c csrc/phylip.h csrc/phyml_util.c csrc/phyml_util.h csrc/protpars.c csrc/raa_acnuc.c csrc/raa_acnuc.h csrc/seq.c csrc/seq.h csrc/zsockr.c
+ sed -i 's|^\(CFLAGS.*\)|\1 -g -DFL_LIBRARY|' Makefile
+ exit 0
Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.882
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd seaview
+ make -j8
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF comlines.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF load_seq.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF resource.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF regions.cxx
regions.cxx: In function 'void save_active_region(SEA_VIEW*)':
regions.cxx:502:10: warning: variable 'taille' set but not used [-Wunused-but-set-variable]
502 | int tmp, taille;
| ^~~~~~
regions.cxx: In function 'int create_gblocks_mask(SEA_VIEW*, region*, int, int, int, int, int)':
regions.cxx:313:9: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
313 | system(cmd);
| ~~~~~~^~~~~
regions.cxx:291:26: warning: '%s' directive writing up to 4095 bytes into a region of size 496 [-Wformat-overflow=]
291 | sprintf(cmd, "\"%s\" \"%s\" -p=s -t=%c", q, fname, view->protein?'p':'d');
| ^~ ~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from regions.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output 16 or more bytes (assuming 4111) into a destination of size 500
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
regions.cxx:343:35: warning: 'last' may be used uninitialized in this function [-Wmaybe-uninitialized]
343 | memmove(cmd, last, l + 1 - (last - cmd));
| ~~~~~^~~~~
regions.cxx: In function 'const char* site_mask_creation_dialog(SEA_VIEW*, position_mask*)':
regions.cxx:745:10: warning: 'retval' may be used uninitialized in this function [-Wmaybe-uninitialized]
745 | return retval;
| ^~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF viewasprots.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF xfmatpt.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF concatenate.cxx
concatenate.cxx: In function 'void concatenate(SEA_VIEW*, SEA_VIEW*, bool, bool, bool)':
concatenate.cxx:114:25: warning: 'gaps' may be used uninitialized in this function [-Wmaybe-uninitialized]
114 | add_seq_to_align(target, source->seqname[i], gaps, target_length, no_gui);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
concatenate.cxx:124:32: warning: 'found' may be used uninitialized in this function [-Wmaybe-uninitialized]
124 | if (want_addgaps) found[j] = TRUE;
| ^
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF racnuc_fetch.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF statistics.cxx
statistics.cxx: In function 'void geni_act(SEA_VIEW*)':
statistics.cxx:596:14: warning: 'compgroupall' may be used uninitialized in this function [-Wmaybe-uninitialized]
596 | sprintf(p, "\n\nGroup %d : %.1f%%", i+1, compgroupall[i]);
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
statistics.cxx:366:43: warning: 'compgroup' may be used uninitialized in this function [-Wmaybe-uninitialized]
366 | double **comp, *compall, compcomp[4], **compgroup, *compgroupall, min[4], max[4];
| ^~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF nexus.cxx
nexus.cxx: In function 'char** process_taxa_taxlabels(FILE*, int)':
nexus.cxx:357:17: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
357 | if(p != NULL && *p != ';') skip_command(in);
| ^~
nexus.cxx: In function 'list_segments* build_list_pairs(FILE*, int)':
nexus.cxx:440:28: warning: 'next' may be used uninitialized in this function [-Wmaybe-uninitialized]
440 | debut = next->debut; fin = next->fin;
| ~~~~^~~~~~~~~~~
nexus.cxx: In function 'char** process_block_characters(FILE*, int*, char***, int*, int*)':
nexus.cxx:682:37: warning: 'gap' may be used uninitialized in this function [-Wmaybe-uninitialized]
682 | seqs = process_chars_m_interleave(in, *nsites, gap,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
683 | *pntaxa, *taxnames, FALSE, matchchar, missing, *protein);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF least_squares_brl.cxx
least_squares_brl.cxx: In function 'int tree_btos(int**, int, double*, double*, double*, char**, noeud2**)':
least_squares_brl.cxx:374:27: warning: 'tax2' may be used uninitialized in this function [-Wmaybe-uninitialized]
374 | p2 = bottomnode(arbre_s[tax2]);
| ^~~~
least_squares_brl.cxx:373:27: warning: 'tax1' may be used uninitialized in this function [-Wmaybe-uninitialized]
373 | p1 = bottomnode(arbre_s[tax1]);
| ^~~~
least_squares_brl.cxx:349:3: warning: 'sommebi' may be used uninitialized in this function [-Wmaybe-uninitialized]
349 | if (sommebi == 2) {
| ^~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF pseudoterminal.cxx
pseudoterminal.cxx: In function 'int run_external_prog_in_pseudoterm(char*, const char*, const char*)':
pseudoterminal.cxx:342:11: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
342 | freopen(dialogfname, "r", stdin);
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
pseudoterminal.cxx:344:10: warning: ignoring return value of 'FILE* freopen(const char*, const char*, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
344 | freopen(slavename, "a", stderr);
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF trees.cxx
trees.cxx: In function 'matrix* Obs_Dist(allseq*, model*)':
trees.cxx:1577:9: warning: variable 'unc_len' set but not used [-Wunused-but-set-variable]
1577 | phydbl unc_len;
| ^~~~~~~
trees.cxx: In function 'matrix* K80_dist_nogamma(allseq*)':
trees.cxx:1719:9: warning: variable 'unc_len' set but not used [-Wunused-but-set-variable]
1719 | phydbl unc_len;
| ^~~~~~~
trees.cxx: In function 'void run_phyml_callback(Fl_Widget*, void*)':
trees.cxx:1297:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
1297 | fread(bootstrap_trees, l, 1, in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
trees.cxx: In function 'void command_line_phylogeny(int, char**)':
trees.cxx:2790:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
2790 | fread(utree, s, 1, in);
| ~~~~~^~~~~~~~~~~~~~~~~
trees.cxx: In function 'char* run_parsimony_method(SEA_VIEW*, int, const char*, int, int, int, int, Fl_Box*, dnapars_S_option, const char**, float, int, char**, void (*)(const char*, ...))':
trees.cxx:2375:40: warning: '%d' directive writing between 1 and 10 bytes into a region of size 9 [-Wformat-overflow=]
2375 | sprintf(tmp, "Bootstrap replicate: %d", j + 1);
| ^~
trees.cxx:2375:18: note: directive argument in the range [1, 2147483647]
2375 | sprintf(tmp, "Bootstrap replicate: %d", j + 1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from trees.cxx:6:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 23 and 32 bytes into a destination of size 30
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
trees.cxx:2069:57: warning: ' best trees, ' directive writing 13 bytes into a region of size between 12 and 21 [-Wformat-overflow=]
2069 | if (count_best > 1) sprintf(best, "consensus of %d best trees, ", count_best);
| ^~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from trees.cxx:6:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 28 and 37 bytes into a destination of size 35
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
trees.cxx:2124:51: warning: 'all_best' may be used uninitialized in this function [-Wmaybe-uninitialized]
2124 | if (count > 1) final_tree = add_equally_best(final_tree, all_best, count);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
trees.cxx:2420:41: warning: 'all_best' may be used uninitialized in this function [-Wmaybe-uninitialized]
2420 | if (count > 1) tree = add_equally_best(tree, all_best, count);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
trees.cxx:2353:33: note: 'all_best' was declared here
2353 | char *tree, *newtree, *p, *q, *all_best, *bootstrap_trees = NULL;
| ^~~~~~~~
trees.cxx: In function 'char* run_distance_method(SEA_VIEW*, int, int, int, int, int, Fl_Box*, const char*, int, const char*, const char*, int, void (*)(const char*, ...), int, int)':
trees.cxx:520:10: warning: 'display_tree' may be used uninitialized in this function [-Wmaybe-uninitialized]
520 | return display_tree;
| ^~~~~~~~~~~~
trees.cxx: In function 'char* replace_tree_names_by_rank(const char*, char**, int)':
trees.cxx:2728:24: warning: 'qstart' may be used uninitialized in this function [-Wmaybe-uninitialized]
2728 | q = qstart + strlen(qstart);
| ~~~~~~^~~~~~~~
trees.cxx: In function 'void command_line_phylogeny(int, char**)':
trees.cxx:2841:11: warning: 'tree' may be used uninitialized in this function [-Wmaybe-uninitialized]
2841 | fwrite(tree, strlen(tree), 1, out);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF align.cxx
align.cxx: In function 'void replace_stars(char*)':
align.cxx:1302:7: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
1302 | fread(all, 1, l, in);
| ~~~~~^~~~~~~~~~~~~~~
align.cxx: In function 'void edit_align_callback(Fl_Widget*, void*)':
align.cxx:944:30: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=]
944 | sprintf(resname, "msa_name_%d", view->alignment_algorithm + 1);
| ^
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 11 and 21 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:991:32: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-2147483647, 2147483647]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx: In function 'void align_opt_callback(Fl_Widget*, long int)':
align.cxx:991:32: warning: '%d' directive writing between 1 and 9 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-59652328, 59652318]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 23 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:973:17: warning: '%d' directive writing between 1 and 8 bytes into a region of size 5 [-Wformat-overflow=]
973 | sprintf(tmp, "%d", reponse);
| ^~
align.cxx:973:16: note: directive argument in the range [0, 59652317]
973 | sprintf(tmp, "%d", reponse);
| ^~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 2 and 9 bytes into a destination of size 5
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx: In function 'void delete_align_callback(Fl_Widget*, void*)':
align.cxx:825:31: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=]
825 | sprintf(msa_name, "msa_name_%d", view->alignment_algorithm + 1);
| ^
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 11 and 21 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:835:32: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=]
835 | sprintf(msa_name, "msa_name_%d", num + 1);
| ^
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 11 and 21 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:837:32: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=]
837 | sprintf(msa_name, "msa_name_%d", num);
| ^
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 11 and 21 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:840:32: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=]
840 | sprintf(msa_name, "msa_args_%d", num + 1);
| ^
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 11 and 21 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:842:32: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=]
842 | sprintf(msa_name, "msa_args_%d", num);
| ^
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 11 and 21 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:991:32: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-2147483646, 2147483647]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:991:32: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-2147483647, 2147483647]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:991:32: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-2147483647, 2147483647]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx:991:32: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-2147483647, 2147483647]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx: In function 'char* calc_msa_command(SEA_VIEW*, char*, void (*)(const char*, ...))':
align.cxx:991:32: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-2147483647, 2147483647]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx: In function 'void cre_align_menu(SEA_VIEW*)':
align.cxx:991:32: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-2147483647, 2147483647]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx: In function 'char* get_algo_opts(int, char**)':
align.cxx:991:32: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-2147483647, 2147483647]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx: In function 'char* get_opt_resname(int)':
align.cxx:991:32: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~
align.cxx:991:18: note: directive argument in the range [-2147483647, 2147483647]
991 | sprintf(resname, "msa_opt_args_%d", algonum + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx: In function 'int save_fasta_file_no_gaponly(char*, char**, int, int*, int*)':
align.cxx:1345:28: warning: '%d' directive writing between 1 and 10 bytes into a region of size 8 [-Wformat-overflow=]
1345 | sprintf(seqname[num], "S_%d", num);
| ^~
align.cxx:1345:25: note: directive argument in the range [0, 1073741822]
1345 | sprintf(seqname[num], "S_%d", num);
| ^~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 4 and 13 bytes into a destination of size 10
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
align.cxx: In function 'void unalign(SEA_VIEW*)':
align.cxx:1415:56: warning: 'calc_color_function' may be used uninitialized in this function [-Wmaybe-uninitialized]
1415 | view->col_rank[num][i] = (char)calc_color_function( res );
| ~~~~~~~~~~~~~~~~~~~^~~~~~~
align.cxx: In function 'int replace_align_part(SEA_VIEW*, int, int, char*, int, int, int*, align_choice, const char**)':
align.cxx:425:74: warning: 'calc_color_function' may be used uninitialized in this function [-Wmaybe-uninitialized]
425 | if (view->col_rank) view->col_rank[num][i] = (char)calc_color_function( res );
| ~~~~~~~~~~~~~~~~~~~^~~~~~~
align.cxx: In function 'void profile_align(SEA_VIEW*)':
align.cxx:1281:62: warning: 'calc_color_function' may be used uninitialized in this function [-Wmaybe-uninitialized]
1281 | view->col_rank[table[num]][i] = (char)calc_color_function( res );
| ~~~~~~~~~~~~~~~~~~~^~~~~~~
align.cxx: In function 'int command_line_align(int, char**)':
align.cxx:1507:37: warning: '%d' directive writing between 1 and 11 bytes into a region of size 7 [-Wformat-overflow=]
1507 | sprintf(opt_name, "msa_opt_args_%d", view->alignment_algorithm + 1);
| ^~
align.cxx:1507:23: note: directive argument in the range [-2147483647, 2147483647]
1507 | sprintf(opt_name, "msa_opt_args_%d", view->alignment_algorithm + 1);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from align.cxx:1:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 15 and 25 bytes into a destination of size 20
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF pdf_or_ps.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF threads.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF custom.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF tbe.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF svg.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF unrooted.cxx
unrooted.cxx: In function 'hit try_angle_draw(float, int*, int*, float*, int, int, int, int)':
unrooted.cxx:634:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
634 | if(x2 > xmax) xmax = x2; if(x3 > xmax) xmax = x3; if(x4 > xmax) xmax = x4;
| ^~
unrooted.cxx:634:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
634 | if(x2 > xmax) xmax = x2; if(x3 > xmax) xmax = x3; if(x4 > xmax) xmax = x4;
| ^~
unrooted.cxx:635:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
635 | if(x2 < xmin) xmin = x2; if(x3 < xmin) xmin = x3; if(x4 < xmin) xmin = x4;
| ^~
unrooted.cxx:635:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
635 | if(x2 < xmin) xmin = x2; if(x3 < xmin) xmin = x3; if(x4 < xmin) xmin = x4;
| ^~
unrooted.cxx:636:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
636 | if(y2 > ymax) ymax = y2; if(y3 > ymax) ymax = y3; if(y4 > ymax) ymax = y4;
| ^~
unrooted.cxx:636:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
636 | if(y2 > ymax) ymax = y2; if(y3 > ymax) ymax = y3; if(y4 > ymax) ymax = y4;
| ^~
unrooted.cxx:637:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
637 | if(y2 < ymin) ymin = y2; if(y3 < ymin) ymin = y3; if(y4 < ymin) ymin = y4;
| ^~
unrooted.cxx:637:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
637 | if(y2 < ymin) ymin = y2; if(y3 < ymin) ymin = y3; if(y4 < ymin) ymin = y4;
| ^~
unrooted.cxx: In function 'int set_angles_noeuds(bignoeud*, bignoeud*, double, double*, double)':
unrooted.cxx:1121:66: warning: 'poids2' may be used uninitialized in this function [-Wmaybe-uninitialized]
1121 | debut->position.angle = (poids1*angle1 + poids2*angle2)/(poids1+poids2);
| ~~~~~~~^~~~~~~~
unrooted.cxx:1121:66: warning: 'poids1' may be used uninitialized in this function [-Wmaybe-uninitialized]
unrooted.cxx:1128:9: warning: 'poids' may be used uninitialized in this function [-Wmaybe-uninitialized]
1128 | return poids;
| ^~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/parser.c
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF treedraw.cxx
treedraw.cxx: In function 'int count_node(noeud*, noeud*)':
treedraw.cxx:3305:15: warning: argument 2 null where non-null expected [-Wnonnull]
3305 | if (strcmp(centre->nom, target1) == 0 || strcmp(centre->nom, target2) == 0 || strcmp(centre->nom, target3) == 0) {
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from seaview.h:5,
from treedraw.h:4,
from treedraw.cxx:18:
/usr/include/string.h:140:12: note: in a call to function 'int strcmp(const char*, const char*)' declared here
140 | extern int strcmp (const char *__s1, const char *__s2)
| ^~~~~~
treedraw.cxx:3305:52: warning: argument 2 null where non-null expected [-Wnonnull]
3305 | if (strcmp(centre->nom, target1) == 0 || strcmp(centre->nom, target2) == 0 || strcmp(centre->nom, target3) == 0) {
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from seaview.h:5,
from treedraw.h:4,
from treedraw.cxx:18:
/usr/include/string.h:140:12: note: in a call to function 'int strcmp(const char*, const char*)' declared here
140 | extern int strcmp (const char *__s1, const char *__s2)
| ^~~~~~
treedraw.cxx:3305:89: warning: argument 2 null where non-null expected [-Wnonnull]
3305 | if (strcmp(centre->nom, target1) == 0 || strcmp(centre->nom, target2) == 0 || strcmp(centre->nom, target3) == 0) {
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from seaview.h:5,
from treedraw.h:4,
from treedraw.cxx:18:
/usr/include/string.h:140:12: note: in a call to function 'int strcmp(const char*, const char*)' declared here
140 | extern int strcmp (const char *__s1, const char *__s2)
| ^~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF addbootstrap.cxx
addbootstrap.cxx: In function 'char* compute_consensus_tree(char**, int**, int)':
addbootstrap.cxx:895:7: warning: 'k' may be used uninitialized in this function [-Wmaybe-uninitialized]
895 | if (k < height) { // columns were not all identical, try columns on 0-side of branch i
| ^~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/zsockr.c
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/md5.c
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/misc_acnuc.c
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/protpars.c
csrc/protpars.c: In function 'protpars':
csrc/protpars.c:2097:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
2097 | fread(tree, L, 1, outtree);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
At top level:
csrc/protpars.c:129:12: warning: 'tmpa' defined but not used [-Wunused-variable]
129 | static aas tmpa;
| ^~~~
csrc/protpars.c:111:21: warning: 'inseed0' defined but not used [-Wunused-variable]
111 | static long inseed, inseed0;
| ^~~~~~~
csrc/protpars.c:111:13: warning: 'inseed' defined but not used [-Wunused-variable]
111 | static long inseed, inseed0;
| ^~~~~~
csrc/protpars.c:107:94: warning: 'weightfilename' defined but not used [-Wunused-variable]
107 | static Char infilename[FNMLNGTH], outfilename[FNMLNGTH], intreename[FNMLNGTH], *outtreename, weightfilename[FNMLNGTH];
| ^~~~~~~~~~~~~~
csrc/protpars.c:107:58: warning: 'intreename' defined but not used [-Wunused-variable]
107 | static Char infilename[FNMLNGTH], outfilename[FNMLNGTH], intreename[FNMLNGTH], *outtreename, weightfilename[FNMLNGTH];
| ^~~~~~~~~~
csrc/protpars.c:107:35: warning: 'outfilename' defined but not used [-Wunused-variable]
107 | static Char infilename[FNMLNGTH], outfilename[FNMLNGTH], intreename[FNMLNGTH], *outtreename, weightfilename[FNMLNGTH];
| ^~~~~~~~~~~
csrc/protpars.c:107:13: warning: 'infilename' defined but not used [-Wunused-variable]
107 | static Char infilename[FNMLNGTH], outfilename[FNMLNGTH], intreename[FNMLNGTH], *outtreename, weightfilename[FNMLNGTH];
| ^~~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF use_mase_files.cxx
use_mase_files.cxx: In function 'int read_mase_seqs_header(const char*, char***, char***, char***, char**, char**)':
use_mase_files.cxx:215:2: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
215 | while((line[l-1] == ' ' || line[l-1] == '\n') && l>0 ) l--; line[l] = 0;
| ^~~~~
use_mase_files.cxx:215:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
215 | while((line[l-1] == ' ' || line[l-1] == '\n') && l>0 ) l--; line[l] = 0;
| ^~~~
use_mase_files.cxx: In function 'int read_clustal_align(const char*, char***, char***, char***, char**, char**)':
use_mase_files.cxx:623:3: warning: this 'while' clause does not guard... [-Wmisleading-indentation]
623 | while(*p==' ') p--; *(p+1)=0;
| ^~~~~
use_mase_files.cxx:623:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'while'
623 | while(*p==' ') p--; *(p+1)=0;
| ^
use_mase_files.cxx: In function 'int read_mase_seqs_header(const char*, char***, char***, char***, char**, char**)':
use_mase_files.cxx:171:11: warning: 'lpre' may be used uninitialized in this function [-Wmaybe-uninitialized]
171 | memcpy(p, header, lpre);
| ~~~~~~^~~~~~~~~~~~~~~~~
use_mase_files.cxx: In function 'int read_phylip_align(const char*, char***, char***, char***, char**, char**)':
use_mase_files.cxx:521:3: warning: 'q' may be used uninitialized in this function [-Wmaybe-uninitialized]
521 | l = q - seq[totseqs - 1];
| ~~^~~~~~~~~~~~~~~~~~~~~~
use_mase_files.cxx: In function 'int read_clustal_align(const char*, char***, char***, char***, char**, char**)':
use_mase_files.cxx:636:5: warning: 'wid_name' may be used uninitialized in this function [-Wmaybe-uninitialized]
636 | l -= wid_name;
| ~~^~~~~~~~~~~
use_mase_files.cxx:638:17: warning: 'curr_max_len' may be used uninitialized in this function [-Wmaybe-uninitialized]
638 | curr_max_len += CLU_BLOCK_LEN;
use_mase_files.cxx:650:8: warning: 'l' may be used uninitialized in this function [-Wmaybe-uninitialized]
650 | memcpy(seq[curr_spec]+curr_len, line + wid_name, l);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
use_mase_files.cxx: In function 'int printout(SEA_VIEW*, const char*, int, int, Fl_Paged_Device::Page_Format, int, int, int, Fl_Paged_Device::Page_Layout, int)':
use_mase_files.cxx:1826:16: warning: 'vary_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
1826 | vary_pos[k++] = current + i + 1;
| ^
use_mase_files.cxx:1950:34: warning: 'surface' may be used uninitialized in this function [-Wmaybe-uninitialized]
1950 | if (use_pdf || use_svg) delete surface;
| ^~~~~~~
use_mase_files.cxx:1980:33: warning: 'descender' may be used uninitialized in this function [-Wmaybe-uninitialized]
1980 | fl_rectf(xx, y - fontsize + descender, char_width+1, fontsize);
| ~~~~~~~~~~~~~^~~~~~~~~~~
use_mase_files.cxx:1689:35: note: 'descender' was declared here
1689 | double char_width = fontsize/2, descender, margin = 25;
| ^~~~~~~~~
use_mase_files.cxx:1847:33: warning: 'top_margin' may be used uninitialized in this function [-Wmaybe-uninitialized]
1847 | if( use_pdf || use_svg) fl_draw(num_line, margin, top_margin + curr_lines * fontsize);
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
use_mase_files.cxx: In function 'void format_conversion(int, char**)':
use_mase_files.cxx:2270:20: warning: 'current_seg' may be used uninitialized in this function [-Wmaybe-uninitialized]
2270 | current_seg->next = seg;
| ~~~~~~~~~~~~~~~~~~^~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/dnapars.c
csrc/dnapars.c: In function 'dnapars':
csrc/dnapars.c:1685:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
1685 | fread(tree, L, 1, outtree);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
At top level:
csrc/dnapars.c:112:17: warning: 'names' defined but not used [-Wunused-variable]
112 | static boolean *names;
| ^~~~~
csrc/dnapars.c:108:16: warning: 'nothing' defined but not used [-Wunused-variable]
108 | static baseptr nothing;
| ^~~~~~~
csrc/dnapars.c:81:6: warning: 'weightfilename' defined but not used [-Wunused-variable]
81 | weightfilename[FNMLNGTH];
| ^~~~~~~~~~~~~~
csrc/dnapars.c:80:58: warning: 'intreename' defined but not used [-Wunused-variable]
80 | static Char infilename[FNMLNGTH], outfilename[FNMLNGTH], intreename[FNMLNGTH], *outtreename,
| ^~~~~~~~~~
csrc/dnapars.c:80:35: warning: 'outfilename' defined but not used [-Wunused-variable]
80 | static Char infilename[FNMLNGTH], outfilename[FNMLNGTH], intreename[FNMLNGTH], *outtreename,
| ^~~~~~~~~~~
csrc/dnapars.c:80:13: warning: 'infilename' defined but not used [-Wunused-variable]
80 | static Char infilename[FNMLNGTH], outfilename[FNMLNGTH], intreename[FNMLNGTH], *outtreename,
| ^~~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/raa_acnuc.c
csrc/raa_acnuc.c: In function 'raa_bit1':
csrc/raa_acnuc.c:1083:7: warning: variable 'reponse' set but not used [-Wunused-but-set-variable]
1083 | char *reponse;
| ^~~~~~~
csrc/raa_acnuc.c: In function 'raa_bit0':
csrc/raa_acnuc.c:1093:7: warning: variable 'reponse' set but not used [-Wunused-but-set-variable]
1093 | char *reponse;
| ^~~~~~~
csrc/raa_acnuc.c: In function 'raa_copylist':
csrc/raa_acnuc.c:1114:7: warning: variable 'reponse' set but not used [-Wunused-but-set-variable]
1114 | char *reponse;
| ^~~~~~~
csrc/raa_acnuc.c: In function 'raa_zerolist':
csrc/raa_acnuc.c:1124:7: warning: variable 'reponse' set but not used [-Wunused-but-set-variable]
1124 | char *reponse;
| ^~~~~~~
csrc/raa_acnuc.c: In function 'raa_setliststate':
csrc/raa_acnuc.c:1134:7: warning: variable 'reponse' set but not used [-Wunused-but-set-variable]
1134 | char *reponse, str_type[3];
| ^~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF seaview.cxx
seaview.cxx: In function 'int delete_selected_seqs(SEA_VIEW*)':
seaview.cxx:1770:2: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
1770 | for(i = 0, j = 0; i< view->tot_seqs; i++)
| ^~~
seaview.cxx:1773:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
1773 | memcpy(view->col_rank , temp_data, new_tot_seqs * sizeof(char *) );
| ^~~~~~
seaview.cxx: In function 'void colors_callback(Fl_Widget*, void*)':
seaview.cxx:1924:15: warning: variable 'item' set but not used [-Wunused-but-set-variable]
1924 | Fl_Menu_Item *item;
| ^~~~
seaview.cxx: In function 'void delete_tmp_filename(const char*)':
seaview.cxx:653:9: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
653 | system(fname);
| ~~~~~~^~~~~~~
seaview.cxx: In function 'char* run_and_close_native_file_chooser(Fl_Native_File_Chooser*, int)':
seaview.cxx:2916:38: warning: ignoring return value of 'int chdir(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
2916 | if( *last_visited_directory )chdir(last_visited_directory);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
seaview.cxx: In function 'void help_callback(Fl_Widget*, void*)':
seaview.cxx:3629:12: warning: '%s' directive argument is null [-Wformat-overflow=]
3629 | fl_alert(
| ~~~~~~~~^
3630 | #ifdef __APPLE__
| ~~~~~~~~~~~~~~~~
3631 | "No help information in program resources"
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
3632 | #else
| ~~~~~
3633 | "Help file %s\nnot found in PATH directories nor in current directory", help_file
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
3634 | #endif
| ~~~~~~
3635 | );
| ~
seaview.cxx: In function 'void _Z11draw_headerP9Fl_WidgetP9_SEA_VIEW.part.0(Fl_Widget*, SEA_VIEW*)':
seaview.cxx:1141:23: warning: '%7d' directive writing between 7 and 11 bytes into a region of size 10 [-Wformat-overflow=]
1141 | sprintf(site_line, "%7d", view->first_site + view->tot_sites - 1);
| ^~~
seaview.cxx:1141:22: note: directive argument in the range [-2147483648, 2147483646]
1141 | sprintf(site_line, "%7d", view->first_site + view->tot_sites - 1);
| ^~~~~
In file included from /usr/include/stdio.h:866,
from seaview.h:3,
from seaview.cxx:67:
/usr/include/bits/stdio2.h:38:34: note: '__builtin___sprintf_chk' output between 8 and 12 bytes into a destination of size 10
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:532,
from seaview.h:5,
from seaview.cxx:67:
In function 'char* strncpy(char*, const char*, size_t)',
inlined from 'void goto_callback(Fl_Widget*, void*)' at seaview.cxx:2745:9:
/usr/include/bits/string_fortified.h:91:34: warning: 'char* __builtin___strncpy_chk(char*, const char*, unsigned int, unsigned int)' specified bound depends on the length of the source argument [-Wstringop-overflow=]
91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
seaview.cxx: In function 'void goto_callback(Fl_Widget*, void*)':
seaview.cxx:2743:12: note: length computed here
2743 | l = strlen(p);
| ~~~~~~^~~
seaview.cxx: In function 'void del_gap_only_sites(SEA_VIEW*)':
seaview.cxx:1707:9: warning: 'debut' may be used uninitialized in this function [-Wmaybe-uninitialized]
1707 | count = position - debut;
| ~~~~~~^~~~~~~~~~~~~~~~~~
seaview.cxx: In function 'int delete_selected_seqs(SEA_VIEW*)':
seaview.cxx:1779:16: warning: 'temp_int' may be used uninitialized in this function [-Wmaybe-uninitialized]
1779 | temp_int[j++]= view->list_species_sets[numset][i];
| ^
seaview.cxx:1747:42: warning: 'temp_data' may be used uninitialized in this function [-Wmaybe-uninitialized]
1747 | if( ! view->sel_seqs[i] ) temp_data[j++] = (void *) viewasprots[i];
| ^
seaview.cxx: In function 'void edit_menu_callback(Fl_Widget*, void*)':
seaview.cxx:2580:10: warning: 'new_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
2580 | new_pos += 2;
| ~~~~~~~~^~~~
seaview.cxx: In function 'void handle_keyboard(SEA_VIEW*, unsigned int, int)':
seaview.cxx:4630:2: warning: 'count_each' may be used uninitialized in this function [-Wmaybe-uninitialized]
4630 | if(count_each == multipl &&
| ^~
seaview.cxx:4757:3: warning: 'count_each' may be used uninitialized in this function [-Wmaybe-uninitialized]
4757 | if(count_each == multipl &&
| ^~
seaview.cxx:4681:2: warning: 'count_each' may be used uninitialized in this function [-Wmaybe-uninitialized]
4681 | if(count_each == multipl && view->regions != NULL)
| ^~
seaview.cxx:4640:10: warning: 'count' may be used uninitialized in this function [-Wmaybe-uninitialized]
4640 | new_pos = view->cursor_site - count;
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/bionj.c
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/seq.c
csrc/seq.c: In function 'collapsetree':
csrc/seq.c:4015:11: warning: variable 'j' set but not used [-Wunused-but-set-variable]
4015 | long i, j, index, index2, numd;
| ^
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF FL/Fl_SVG_Image.cxx
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/lwl.c
csrc/lwl.c: In function 'prefastlwl':
csrc/lwl.c:412:1: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
412 | else
| ^~~~
csrc/lwl.c:414:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
414 | aa[9] = 14;/* agc S */
| ^~
csrc/lwl.c:417:1: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
417 | else
| ^~~~
csrc/lwl.c:419:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
419 | aa[11] = 14;/* agt S */
| ^~
csrc/lwl.c:422:1: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
422 | else
| ^~~~
csrc/lwl.c:424:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
424 | aa[13] = 7;/* atc I */
| ^~
csrc/lwl.c:469:1: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
469 | else
| ^~~~
csrc/lwl.c:471:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
471 | aa[57] = 10;/* tgc */
| ^~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/phylip.c
csrc/phylip.c: In function 'scan_eoln':
csrc/phylip.c:161:8: warning: variable 'ch' set but not used [-Wunused-but-set-variable]
161 | char ch;
| ^~
csrc/phylip.c: In function 'stringnames_new':
csrc/phylip.c:2980:8: warning: variable 'len' set but not used [-Wunused-but-set-variable]
2980 | long len, i;
| ^~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
gcc -c -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -Dunix -Icsrc csrc/phyml_util.c
csrc/phyml_util.c: In function 'Warn_And_Exit':
csrc/phyml_util.c:47:2: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
47 | fscanf(stdin,"%c",&c);
| ^~~~~~~~~~~~~~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -c -Dunix -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I. -Icsrc -DDEFAULT_HELPFILE=\"/usr/share/doc/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF treerecs_draw.cxx
treerecs_draw.cxx: In function 'void treerecs_dialog(Fl_Widget*, void*)':
treerecs_draw.cxx:489:20: warning: unused variable 'recphylowml_window' [-Wunused-variable]
489 | Fl_Window* recphylowml_window =
| ^~~~~~~~~~~~~~~~~~
treerecs_draw.cxx:455:9: warning: unused variable 'status' [-Wunused-variable]
455 | int status =
| ^~~~~~
treerecs_draw.cxx: In member function 'virtual void Fl_SVG_Box::draw()':
treerecs_draw.cxx:654:13: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
654 | while(i < svgtexts_size){
| ~~^~~~~~~~~~~~~~~
treerecs_draw.cxx: In constructor 'Fl_SVG_Box::Fl_SVG_Box(int, int, int, int, const char*)':
treerecs_draw.cxx:738:10: warning: 'Fl_SVG_Box::zoom' will be initialized after [-Wreorder]
738 | double zoom;
| ^~~~
treerecs_draw.cxx:736:10: warning: 'double Fl_SVG_Box::svg_shift_x' [-Wreorder]
736 | double svg_shift_x;
| ^~~~~~~~~~~
treerecs_draw.cxx:686:13: warning: when initialized here [-Wreorder]
686 | FL_EXPORT Fl_SVG_Box(int x, int y, int w, int h, const char* filename) :
| ^~~~~~~~~~
treerecs_draw.cxx:737:10: warning: 'Fl_SVG_Box::svg_shift_y' will be initialized after [-Wreorder]
737 | double svg_shift_y;
| ^~~~~~~~~~~
treerecs_draw.cxx:733:16: warning: 'unsigned int Fl_SVG_Box::svgtexts_size' [-Wreorder]
733 | unsigned int svgtexts_size;
| ^~~~~~~~~~~~~
treerecs_draw.cxx:686:13: warning: when initialized here [-Wreorder]
686 | FL_EXPORT Fl_SVG_Box(int x, int y, int w, int h, const char* filename) :
| ^~~~~~~~~~
treerecs_draw.cxx: In destructor 'virtual Fl_SVG_Box::~Fl_SVG_Box()':
treerecs_draw.cxx:722:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
722 | for(int i = 0; i < svgtexts_size ; i++) {
| ~~^~~~~~~~~~~~~~~
treerecs_draw.cxx: In constructor 'SVG_View_data::SVG_View_data()':
treerecs_draw.cxx:762:15: warning: 'SVG_View_data::reconciliation_score_message' will be initialized after [-Wreorder]
762 | const char* reconciliation_score_message;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
treerecs_draw.cxx:759:9: warning: 'float SVG_View_data::total_cost' [-Wreorder]
759 | float total_cost;
| ^~~~~~~~~~
treerecs_draw.cxx:764:3: warning: when initialized here [-Wreorder]
764 | SVG_View_data() :
| ^~~~~~~~~~~~~
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
make: Entering directory '/usr/src/RPM/BUILD/seaview'
g++ -o seaview seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o tbe.o treerecs_draw.o Fl_SVG_Image.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o `fltk-config --use-images --ldflags` -ldl -lpthread -lz
make: Leaving directory '/usr/src/RPM/BUILD/seaview'
+ exit 0
Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.54891
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ /bin/chmod -Rf u+rwX -- /usr/src/tmp/seaview-buildroot
+ :
+ /bin/rm -rf -- /usr/src/tmp/seaview-buildroot
+ PATH=/usr/libexec/rpm-build:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games
+ cd seaview
+ mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/seaview
+ mkdir -p /usr/src/tmp/seaview-buildroot/usr/bin
+ mkdir -p /usr/src/tmp/seaview-buildroot//usr/share/man/man1
+ mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/applications/
+ install -m 755 seaview /usr/src/tmp/seaview-buildroot//usr/bin
+ install -m 644 seaview.html /usr/src/tmp/seaview-buildroot/usr/share/seaview/
+ install -m 644 /usr/src/RPM/SOURCES/seaview.desktop /usr/src/tmp/seaview-buildroot/usr/share/applications/
+ mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/
+ install -m 0644 -p seaview.xpm /usr/src/tmp/seaview-buildroot/usr/share/pixmaps/seaview.xpm
+ install -m 644 seaview.1 /usr/src/tmp/seaview-buildroot//usr/share/man/man1
+ /usr/lib/rpm/brp-alt
Cleaning files in /usr/src/tmp/seaview-buildroot (auto)
Verifying and fixing files in /usr/src/tmp/seaview-buildroot (binconfig,pkgconfig,libtool,desktop,gnuconfig)
/usr/share/applications/seaview.desktop: performed minor cleanup:
6c6
< Icon=seaview.xpm
---
> Icon=seaview
Checking contents of files in /usr/src/tmp/seaview-buildroot/ (default)
Compressing files in /usr/src/tmp/seaview-buildroot (auto)
Verifying ELF objects in /usr/src/tmp/seaview-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal)
verify-elf: WARNING: ./usr/bin/seaview: uses non-LFS functions: fgetpos fopen freopen fsetpos mkstemp open
Hardlinking identical .pyc and .opt-?.pyc files
Executing(%check): /bin/sh -e /usr/src/tmp/rpm-tmp.27515
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd seaview
+ exit 0
Processing files: seaview-5.0-alt1
Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.27515
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd seaview
+ DOCDIR=/usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0
+ export DOCDIR
+ rm -rf /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0
+ /bin/mkdir -p /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0
+ cp -prL seaview.1.xml example.nxs /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0
+ chmod -R go-w /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0
+ chmod -R a+rX /usr/src/tmp/seaview-buildroot/usr/share/doc/seaview-5.0
+ exit 0
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.MIy5BQ
find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.1bLUjS
find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib)
Requires: /lib/ld-linux.so.2, libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.11), libc.so.6(GLIBC_2.15), libc.so.6(GLIBC_2.2), libc.so.6(GLIBC_2.2.1), libc.so.6(GLIBC_2.3), libc.so.6(GLIBC_2.3.4), libc.so.6(GLIBC_2.4), libc.so.6(GLIBC_2.7), libfltk.so.2 >= set: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, libfltk_images.so.2 >= set:jfWg1JaebIlCT0Tk9Z0EM7, libgcc_s.so.1(GCC_3.0), libm.so.6(GLIBC_2.0), libm.so.6(GLIBC_2.1), libm.so.6(GLIBC_2.29), libpthread.so.0(GLIBC_2.0), libpthread.so.0(GLIBC_2.1), libstdc++.so.6(CXXABI_1.3), libstdc++.so.6(CXXABI_1.3.8), libstdc++.so.6(CXXABI_1.3.9), libstdc++.so.6(GLIBCXX_3.4), libstdc++.so.6(GLIBCXX_3.4.20), libstdc++.so.6(GLIBCXX_3.4.21), libz.so.1 >= set:khM4g6JBZuPIo4PSZj1, rtld(GNU_HASH)
Requires(rpmlib): rpmlib(SetVersions)
Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.ehlOrS
Creating seaview-debuginfo package
Processing files: seaview-debuginfo-5.0-alt1
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.8MSxjQ
find-provides: running scripts (debuginfo)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.K44ggR
find-requires: running scripts (debuginfo)
Requires: seaview = 5.0-alt1, /usr/lib/debug/lib/ld-linux.so.2.debug, debug(libc.so.6), debug(libfltk.so.2), debug(libfltk_images.so.2), debug(libgcc_s.so.1), debug(libm.so.6), debug(libpthread.so.0), debug(libstdc++.so.6), debug(libz.so.1)
Adding to seaview-debuginfo a strict dependency on seaview
Wrote: /usr/src/RPM/RPMS/i586/seaview-5.0-alt1.i586.rpm (w2.lzdio)
Wrote: /usr/src/RPM/RPMS/i586/seaview-debuginfo-5.0-alt1.i586.rpm (w2.lzdio)
80.45user 4.34system 0:40.36elapsed 210%CPU (0avgtext+0avgdata 76248maxresident)k
0inputs+0outputs (0major+675541minor)pagefaults 0swaps
99.80user 12.61system 1:29.55elapsed 125%CPU (0avgtext+0avgdata 105040maxresident)k
2192inputs+0outputs (0major+1041616minor)pagefaults 0swaps