<86>Jan 18 11:55:38 userdel[2444421]: delete user 'rooter' <86>Jan 18 11:55:38 userdel[2444421]: removed group 'rooter' owned by 'rooter' <86>Jan 18 11:55:38 userdel[2444421]: removed shadow group 'rooter' owned by 'rooter' <86>Jan 18 11:55:38 groupadd[2444440]: group added to /etc/group: name=rooter, GID=648 <86>Jan 18 11:55:38 groupadd[2444440]: group added to /etc/gshadow: name=rooter <86>Jan 18 11:55:38 groupadd[2444440]: new group: name=rooter, GID=648 <86>Jan 18 11:55:38 useradd[2444453]: new user: name=rooter, UID=648, GID=648, home=/root, shell=/bin/bash <86>Jan 18 11:55:38 userdel[2444480]: delete user 'builder' <86>Jan 18 11:55:38 userdel[2444480]: removed group 'builder' owned by 'builder' <86>Jan 18 11:55:38 userdel[2444480]: removed shadow group 'builder' owned by 'builder' <86>Jan 18 11:55:38 groupadd[2444498]: group added to /etc/group: name=builder, GID=649 <86>Jan 18 11:55:38 groupadd[2444498]: group added to /etc/gshadow: name=builder <86>Jan 18 11:55:38 groupadd[2444498]: new group: name=builder, GID=649 <86>Jan 18 11:55:38 useradd[2444515]: new user: name=builder, UID=649, GID=649, home=/usr/src, shell=/bin/bash <13>Jan 18 11:55:41 rpmi: libgdbm-1.8.3-alt10 1454943334 installed <13>Jan 18 11:55:41 rpmi: libexpat-2.2.10-alt1 sisyphus+259966.100.1.1 1602824518 installed <13>Jan 18 11:55:41 rpmi: libp11-kit-0.23.15-alt2 sisyphus+252784.100.2.2 1591274901 installed <13>Jan 18 11:55:41 rpmi: libtasn1-4.16.0-alt1 sisyphus+245480.100.1.1 1580825062 installed <13>Jan 18 11:55:41 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Jan 18 11:55:41 rpmi: alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Jan 18 11:55:42 rpmi: ca-certificates-2020.10.22-alt1 sisyphus+260224.300.2.1 1603549301 installed <13>Jan 18 11:55:42 rpmi: ca-trust-0.1.2-alt1 sisyphus+233348.100.1.1 1561653823 installed <13>Jan 18 11:55:42 rpmi: p11-kit-trust-0.23.15-alt2 sisyphus+252784.100.2.2 1591274901 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<13>Jan 18 11:55:51 rpmi: libenchant-1.6.0-alt3.qa1 1460409853 installed <13>Jan 18 11:55:51 rpmi: python-module-enchant-2.0.0-alt2 1521122883 installed <13>Jan 18 11:55:51 rpmi: python-modules-curses-2.7.18-alt3 sisyphus+263690.140.6.1 1608730167 installed <13>Jan 18 11:55:51 rpmi: python-2.7.18-alt3 sisyphus+263690.140.6.1 1608730167 installed <13>Jan 18 11:55:51 rpmi: python-strict-2.7.18-alt3 sisyphus+263690.140.6.1 1608730086 installed <13>Jan 18 11:55:51 rpmi: python-modules-distutils-2.7.18-alt3 sisyphus+263690.140.6.1 1608730167 installed <13>Jan 18 11:55:51 rpmi: python-module-pycparser-2.20-alt1 sisyphus+260990.100.1.1 1604547209 installed <13>Jan 18 11:55:51 rpmi: python-module-cffi-1.14.0-alt1 sisyphus+255743.100.1.1 1596453449 installed <13>Jan 18 11:55:51 rpmi: python-module-cryptography-3.0-alt1 sisyphus+255181.100.1.1 1595326578 installed <13>Jan 18 11:55:51 rpmi: python-module-OpenSSL-19.0.0-alt2 sisyphus+261134.140.3.1 1604671956 installed <13>Jan 18 11:55:51 rpmi: python-module-ndg-httpsclient-0.4.2-alt1.qa1 sisyphus+227504.1300.1.2 1555853234 installed <13>Jan 18 11:55:51 rpmi: python-module-PyStemmer-1.0.1-alt1.2.1 1321388303 installed <13>Jan 18 11:55:51 rpmi: python-module-snowballstemmer-1.2.0-alt2.1 1457859319 installed <13>Jan 18 11:55:51 rpmi: python-module-cssselect-0.9.1-alt2 sisyphus+250566.2300.6.1 1588188959 installed <13>Jan 18 11:55:51 rpmi: python-module-html5lib-1:1.0.1-alt1 sisyphus+238807.100.2.1 1570465973 installed <13>Jan 18 11:55:51 rpmi: python-module-lxml-4.5.0-alt3 sisyphus+261290.200.2.1 1604852246 installed <13>Jan 18 11:55:52 rpmi: python-module-docutils-0.14-alt3 sisyphus+239215.40.2.1 1576588058 installed <13>Jan 18 11:55:52 rpmi: python-module-idna-2.10-alt1 sisyphus+255040.100.1.1 1594995857 installed <13>Jan 18 11:55:52 rpmi: python-module-ntlm-1.1.0-alt1.2 sisyphus+228512.100.1.1 1556654575 installed <13>Jan 18 11:55:52 rpmi: python-module-urllib3-2:1.25.10-alt1 sisyphus+255342.100.1.1 1595592746 installed <13>Jan 18 11:55:52 rpmi: python-module-requests-2.23.0-alt1 sisyphus+248062.400.2.1 1584568195 installed <13>Jan 18 11:55:52 rpmi: python-module-pytz-1:2020.1-alt1 sisyphus+254576.100.1.1 1594046074 installed <13>Jan 18 11:55:53 rpmi: python-module-babel-1:2.6.0-alt2 sisyphus+260985.150.8.1 1604548643 installed <13>Jan 18 11:55:53 rpmi: python-module-sphinxcontrib-websupport-1.0.1-alt5 sisyphus+238085.40.2.1 1569316750 installed <13>Jan 18 11:55:53 rpmi: python-module-alabaster-0.7.6-alt3 sisyphus+228351.700.4.1 1556637370 installed <13>Jan 18 11:55:53 rpmi: python-module-Pygments-2.4.2-alt3 sisyphus+251222.100.1.1 1588756657 installed <13>Jan 18 11:55:53 rpmi: python-module-sphinx-1:1.6.5-alt8 sisyphus+244988.100.1.1 1588163023 installed <13>Jan 18 11:55:53 rpmi: libtinfo-devel-6.2.20201107-alt1 sisyphus+261749.100.1.1 1605292929 installed <13>Jan 18 11:55:53 rpmi: libncurses-devel-6.2.20201107-alt1 sisyphus+261749.100.1.1 1605292929 installed <13>Jan 18 11:55:53 rpmi: python3-dev-3.8.6-alt1 sisyphus+259085.100.2.1 1601904174 installed <13>Jan 18 11:55:53 rpmi: libverto-0.3.0-alt1_11 sisyphus+263994.100.1.1 1608994695 installed <13>Jan 18 11:55:53 rpmi: liblmdb-0.9.23-alt1 sisyphus+225277.100.2.1 1553001679 installed <13>Jan 18 11:55:53 rpmi: libkeyutils-1.6.1-alt1 sisyphus+256015.100.1.1 1596820124 installed <13>Jan 18 11:55:53 rpmi: libcom_err-1.45.6.0.24.af1a-alt1 sisyphus+262279.100.1.1 1606088229 installed <86>Jan 18 11:55:53 groupadd[2467527]: group added to /etc/group: name=_keytab, GID=499 <86>Jan 18 11:55:53 groupadd[2467527]: group added to /etc/gshadow: name=_keytab <86>Jan 18 11:55:53 groupadd[2467527]: new group: name=_keytab, GID=499 <13>Jan 18 11:55:54 rpmi: libkrb5-1.18.3-alt1 sisyphus+262109.100.1.1 1605777180 installed <13>Jan 18 11:55:54 rpmi: libtirpc-1.2.6-alt1 sisyphus+250076.100.1.1 1587038270 installed <13>Jan 18 11:55:54 rpmi: libnsl2-1.1.0-alt1_1 1511548749 installed <13>Jan 18 11:55:54 rpmi: libnsl2-devel-1.1.0-alt1_1 1511548749 installed <13>Jan 18 11:55:54 rpmi: python-dev-2.7.18-alt3 sisyphus+263690.140.6.1 1608730167 installed <13>Jan 18 11:55:54 rpmi: python3-module-setuptools-1:46.1.3-alt2 sisyphus+260458.600.6.1 1603876498 installed <13>Jan 18 11:55:54 rpmi: python-module-sphinxcontrib-spelling-2.1.1-alt2.1.2 sisyphus+227529.1100.1.2 1555924423 installed <13>Jan 18 11:55:54 rpmi: rpm-build-gir-0.7.3-alt3 sisyphus+242150.100.1.1 1575312005 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/python-module-9ML-0.1.0-alt4.1.2.nosrc.rpm (w1.gzdio) <13>Jan 18 11:55:59 rpmi: python-tools-2to3-2.7.18-alt3 sisyphus+263690.140.6.1 1608730167 installed <13>Jan 18 11:55:59 rpmi: python-module-setuptools-1:42.0.0-alt3 sisyphus+257539.100.1.1 1599462744 installed Installing python-module-9ML-0.1.0-alt4.1.2.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.30508 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf python-module-9ML-0.1.0 + echo 'Source #0 (python-module-9ML-0.1.0.tar):' Source #0 (python-module-9ML-0.1.0.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/python-module-9ML-0.1.0.tar + cd python-module-9ML-0.1.0 + /bin/chmod -c -Rf u+rwX,go-w . + rm -rf ../python3 + cp -a . ../python3 + pushd ../python3 ~/RPM/BUILD/python3 ~/RPM/BUILD/python-module-9ML-0.1.0 + find -type f -exec sed -i 's|/usr/bin/python|/usr/bin/python3|' -- '{}' + + find -type f -exec sed -i 's|/usr/bin/env python|/usr/bin/python3|' -- '{}' + + find -type f -name '._*' -exec rm -f '{}' + + find ./ -type f -name '*.py' -exec 2to3 -w -n '{}' + RefactoringTool: Skipping optional fixer: buffer RefactoringTool: Skipping optional fixer: idioms RefactoringTool: Skipping optional fixer: set_literal RefactoringTool: Skipping optional fixer: ws_comma RefactoringTool: No changes to ./setup.py RefactoringTool: Refactored ./distribute_setup.py RefactoringTool: Refactored ./testing_scripts/create_skeleton_testing_hierachy.py RefactoringTool: Refactored ./test/unit/nineml_test/utility/INIT_test.py RefactoringTool: No changes to ./test/unit/nineml_test/exceptions/exceptions_test.py RefactoringTool: No changes to ./test/unit/nineml_test/abstraction_layer/util_test.py RefactoringTool: Refactored ./test/unit/nineml_test/abstraction_layer/visitors/cloner_test.py --- ./distribute_setup.py (original) +++ ./distribute_setup.py (refactored) @@ -182,7 +182,7 @@ try: from urllib.request import urlopen except ImportError: - from urllib2 import urlopen + from urllib.request import urlopen tgz_name = "distribute-%s.tar.gz" % version url = download_base + tgz_name saveto = os.path.join(to_dir, tgz_name) --- ./testing_scripts/create_skeleton_testing_hierachy.py (original) +++ ./testing_scripts/create_skeleton_testing_hierachy.py (refactored) @@ -67,8 +67,8 @@ inspect_module(m) -print classes -print functions +print(classes) +print(functions) @@ -77,7 +77,7 @@ def get_local_testing_filename( o ): f = inspect.getfile(o) f = f.replace(root_dir,'') - print f + print(f) f = f.replace('.pyc','.py') assert f.count('.py') == 1 f = f.replace('.py','_test.py') @@ -260,12 +260,12 @@ full_path = self.full_path + suffix if os.path.exists( full_path ): #if False and os.path.exists( full_path ): - print 'Not Overwriting file:', full_path + print('Not Overwriting file:', full_path) return dirname,filename = os.path.split(full_path) if not os.path.exists(dirname): - print 'Creating Directory:', dirname + print('Creating Directory:', dirname) os.makedirs(dirname) package_init = dirname + '/__init__.py' @@ -276,7 +276,7 @@ class_blocks = [self.get_class_skeleton_text(c) for c in self.classes] - print 'Creating Skeleton File:', full_path + print('Creating Skeleton File:', full_path) context = {'class_blocks':class_blocks, 'func_blocks': func_blocks } f_text = Template( test_file_templ, context ).respond() @@ -302,16 +302,16 @@ files_to_create[f] = TestingFile(f, root_testing_dir) files_to_create[f].add_test_func(func) -print 'Done' - - - - -for testing_file in files_to_create.values(): - print testing_file.full_path, testing_file.filename +print('Done') + + + + +for testing_file in list(files_to_create.values()): + print(testing_file.full_path, testing_file.filename) for cls in testing_file.classes: - print ' -- C:', cls + print(' -- C:', cls) for func in testing_file.funcs: - print ' -- F:', func + print(' -- F:', func) testing_file.create_skeleton() --- ./test/unit/nineml_test/utility/INIT_test.py (original) +++ ./test/unit/nineml_test/utility/INIT_test.py (refactored) @@ -408,7 +408,7 @@ # Good Case data = ['hello','world',1,2,3, None] self.assertEqual( - filter_by_type(data, basestring), + filter_by_type(data, str), ['hello','world'] ) self.assertEqual( @@ -418,12 +418,12 @@ # Slightly specical case for None: self.assertEqual( - filter_by_type(data, types.NoneType), + filter_by_type(data, type(None)), [] ) self.assertEqual( - filter_by_type(data, types.BooleanType), + filter_by_type(data, bool), [] ) @@ -458,16 +458,16 @@ # Good Case: data = ['hello','world',1,2,3] - types = [basestring, numbers.Number, types.BooleanType] + types = [str, numbers.Number, bool] filtered = filter_discrete_types(data, types) - self.assertEqual( filtered[basestring], ['hello','world']) + self.assertEqual( filtered[str], ['hello','world']) self.assertEqual( filtered[numbers.Number], [1,2,3]) # Not all objects covered by listed classes: self.assertRaises( NineMLRuntimeError, - filter_discrete_types, data, [basestring] + filter_discrete_types, data, [str] ) --- ./test/unit/nineml_test/abstraction_layer/visitors/cloner_test.py (original) +++ ./test/unit/nineml_test/abstraction_layer/visitors/cRefactoringTool: No changes to ./test/unit/nineml_test/abstraction_layer/visitors/base_test.py RefactoringTool: No changes to ./test/unit/nineml_test/abstraction_layer/validators/equality_checker_test.py RefactoringTool: Refactored ./test/unit/nineml_test/abstraction_layer/flattening/flattening_test.py RefactoringTool: No changes to ./test/unit/nineml_test/abstraction_layer/component_modifiers/component_modifier_test.py RefactoringTool: Refactored ./test/unit/nineml_test/abstraction_layer/component/util_test.py RefactoringTool: No changes to ./test/unit/nineml_test/abstraction_layer/component/ports_test.py RefactoringTool: Refactored ./test/unit/nineml_test/abstraction_layer/component/namespaceaddress_test.py RefactoringTool: No changes to ./test/unit/nineml_test/abstraction_layer/component/math_namespace_test.py RefactoringTool: No changes to ./test/unit/nineml_test/abstraction_layer/component/interface_test.py RefactoringTool: Refactored ./test/unit/nineml_test/abstraction_layer/component/expressions_test.py loner_test.py (refactored) @@ -182,7 +182,7 @@ # Check for duplicates: - self.assertEquals( len( clones), len( set( clones))) + self.assertEqual( len( clones), len( set( clones))) @@ -282,7 +282,7 @@ self.assertEqual( set(b2_clone.state_variables_map.keys()), set([])) - print 'Found Port Connections:', b1_clone.portconnections + print('Found Port Connections:', b1_clone.portconnections) # Port Connections self.assertEqual( --- ./test/unit/nineml_test/abstraction_layer/flattening/flattening_test.py (original) +++ ./test/unit/nineml_test/abstraction_layer/flattening/flattening_test.py (refactored) @@ -368,7 +368,7 @@ # #All on_events return to thier same transition: for r in a_flat.regimes: for on_ev in r.on_events: - self.assertEquals( on_ev.target_regime, r) + self.assertEqual( on_ev.target_regime, r) @@ -562,7 +562,7 @@ # #All on_events return to thier same transition: for r in a_flat.regimes: for on_ev in r.on_events: - self.assertEquals( on_ev.target_regime, r) + self.assertEqual( on_ev.target_regime, r) --- ./test/unit/nineml_test/abstraction_layer/component/util_test.py (original) +++ ./test/unit/nineml_test/abstraction_layer/component/util_test.py (refactored) @@ -170,9 +170,9 @@ for expr_str,(exp_dep, exp_indep, exp_rhs) in TimeDerivatives: td = StrToExpr.time_derivative(expr_str) - self.assertEquals( td.dependent_variable, exp_dep) - self.assertEquals( td.independent_variable, exp_indep) - self.assertEquals( td.rhs, exp_rhs) + self.assertEqual( td.dependent_variable, exp_dep) + self.assertEqual( td.independent_variable, exp_indep) + self.assertEqual( td.rhs, exp_rhs) --- ./test/unit/nineml_test/abstraction_layer/component/namespaceaddress_test.py (original) +++ ./test/unit/nineml_test/abstraction_layer/component/namespaceaddress_test.py (refactored) @@ -136,17 +136,17 @@ fNew = a.get_subnode('atC.atF') gNew = a.get_subnode('atC.atG') - self.assertEquals( + self.assertEqual( gNew.get_node_addr().get_subns_addr('MyObject1'), NamespaceAddress('atC.atG.MyObject1') ) - self.assertEquals( + self.assertEqual( eNew.get_node_addr().get_subns_addr('MyObject2'), NamespaceAddress('atB.atE.MyObject2') ) - self.assertEquals( + self.assertEqual( bNew.get_node_addr().get_subns_addr('MyObject3'), NamespaceAddress('atB.MyObject3') ) --- ./test/unit/nineml_test/abstraction_layer/component/expressions_test.py (original) +++ ./test/unit/nineml_test/abstraction_layer/component/expressions_test.py (refactored) @@ -38,8 +38,8 @@ for rhs, exp_var, exp_func, exp_res, params in valid_rhses: e = Expression(rhs) - self.assertEquals( set( e.rhs_names), set( exp_var) ) - self.assertEquals( set( e.rhs_funcs), set( exp_func) ) + self.assertEqual( set( e.rhs_names), set( exp_var) ) + self.assertEqual( set( e.rhs_funcs), set( exp_func) ) self.assertAlmostEqual( e.rhs_as_python_func()(**params), exp_res, places=4 ) @@ -99,29 +99,29 @@ e = Expression( "V/(1 + mg_conc*eta*exp(-1*gamma*V*V)) * sin(V)" ) e.rhs_name_transform_inplace({'V':'VNEW'}) - self.assertEquals( e.rhs, "VNEW/(1 + mg_conc*eta*exp(-1*gamma*VNEW*VNEW)) * sin(VNEW)" ) + self.assertEqual( e.rhs, "VNEW/(1 + mg_conc*eta*exp(-1*gamma*VNEW*VNEW)) * sin(VNEW)" ) # Don't Change builtin function names: e.rhs_name_transform_inplace({'sin':'SIN'}) - self.assertEquals( e.rhs, "VNEW/(1 + mg_conc*eta*exp(-1*gamma*VNEW*VNEW)) * sin(VNEW)" ) + self.assertEqual( e.rhs, "VNEW/(1 + mg_conc*eta*exp(-1*gamma*VNEWRefactoringTool: No changes to ./test/unit/nineml_test/abstraction_layer/component/events_test.py RefactoringTool: Refactored ./test/unit/nineml_test/abstraction_layer/component/dynamics_test.py *VNEW)) * sin(VNEW)" ) e.rhs_name_transform_inplace({'exp':'EXP'}) - self.assertEquals( e.rhs, "VNEW/(1 + mg_conc*eta*exp(-1*gamma*VNEW*VNEW)) * sin(VNEW)" ) + self.assertEqual( e.rhs, "VNEW/(1 + mg_conc*eta*exp(-1*gamma*VNEW*VNEW)) * sin(VNEW)" ) # Check the attributes: - self.assertEquals( set( e.rhs_atoms ), set( ['VNEW', 'mg_conc', 'eta', 'gamma','exp','sin'] )) - self.assertEquals( set( e.rhs_funcs ), set( ['exp','sin'] )) + self.assertEqual( set( e.rhs_atoms ), set( ['VNEW', 'mg_conc', 'eta', 'gamma','exp','sin'] )) + self.assertEqual( set( e.rhs_funcs ), set( ['exp','sin'] )) def test_rhs_atoms_in_namespace(self): from nineml.abstraction_layer import Expression e = Expression( "random.randn() + random.randn() + random.randint() / sin(t)" ) - self.assertEquals( + self.assertEqual( set( e.rhs_atoms ), set(['t','random.randn','random.randint', 'sin'] ) ) - self.assertEquals( + self.assertEqual( set( e.rhs_atoms_in_namespace('random') ), set(['randn','randint'] ) ) @@ -284,9 +284,9 @@ from nineml.abstraction_layer.component.expressions import TimeDerivative td = TimeDerivative( dependent_variable='X', rhs=' y*f - sin(q*q) + 4*a*exp(Y)' ) - self.assertEquals( sorted(td.atoms), sorted(['X','y','f','sin','exp','q','a','Y','t']) ) - self.assertEquals( sorted(td.lhs_atoms), sorted(['X','t']) ) - self.assertEquals( sorted(td.rhs_atoms), sorted(['y','f','sin','exp','q','a','Y']) ) + self.assertEqual( sorted(td.atoms), sorted(['X','y','f','sin','exp','q','a','Y','t']) ) + self.assertEqual( sorted(td.lhs_atoms), sorted(['X','t']) ) + self.assertEqual( sorted(td.rhs_atoms), sorted(['y','f','sin','exp','q','a','Y']) ) @@ -296,32 +296,32 @@ def test_independent_variable(self): from nineml.abstraction_layer.component.expressions import TimeDerivative td = TimeDerivative( dependent_variable='X', rhs=' y*f - sin(q*q) + 4*a*exp(Y)' ) - self.assertEquals( td.independent_variable, 't') - self.assertEquals( td.dependent_variable, 'X') + self.assertEqual( td.independent_variable, 't') + self.assertEqual( td.dependent_variable, 'X') # Check substitutions to the LHS: td.lhs_name_transform_inplace({'X':'x'} ) - self.assertEquals( td.dependent_variable, 'x') + self.assertEqual( td.dependent_variable, 'x') # Since this is always time, we should not be changing the # independent_variable (dt) td.lhs_name_transform_inplace({'t':'T'} ) - self.assertEquals( td.independent_variable, 'T') + self.assertEqual( td.independent_variable, 'T') # Aand change them again using 'name_transform_inplace' # Check substitutions to the LHS: td.name_transform_inplace({'x':'X1'}) - self.assertEquals( td.dependent_variable, 'X1') + self.assertEqual( td.dependent_variable, 'X1') # Since this is always time, we should not be changing the # independent_variable (dt) td.lhs_name_transform_inplace({'T':'time'} ) - self.assertEquals( td.independent_variable, 'time') - - - - - - - + self.assertEqual( td.independent_variable, 'time') + + + + + + + --- ./test/unit/nineml_test/abstraction_layer/component/dynamics_test.py (original) +++ ./test/unit/nineml_test/abstraction_layer/component/dynamics_test.py (refactored) @@ -22,50 +22,50 @@ from nineml.abstraction_layer.component import OutputEvent from nineml.exceptions import NineMLRuntimeError - self.assertEquals( type( On('V>0') ), OnCondition ) - self.assertEquals( type( On('V<0') ), OnCondition ) - self.assertEquals( type( On('V<0 & K>0') ), OnCondition ) - self.assertEquals( type( On('V==0') ), OnCondition ) - - self.assertEquals( + self.assertEqual( type( On('V>0') ), OnCondition ) + self.assertEqual( type( On('V<0') ), OnCondition ) + self.assertEqual( type( On('V<0 & K>0') ), OnCondition ) + self.assertEqual( type( On('V==0') ), OnCondition ) + + self.assertEqual( type( On("q > 1 / (( 1 + mg_conc * eta * exp ( -1 * gamma*V)))")), OnCondition ) - self.assertEquals( type( On('SP0') ), OnEvent ) - self.assertEquals( type( On('SP1') ), OnEvent ) + self.assertEqual( type( On('SP0') ), OnEvent ) + self.assertEqual( type( On('SP1') ), OnEvent ) # Check we can use 'do' with single and multiple values tr = On('V>0') - self.assertEquals( len(list( tr.event_outputs)), 0 ) - self.assertEquals( len(list( tr.state_assignments)), 0 ) + self.assertEqual( len(list( tr.event_outputs)), 0 ) + self.assertEqual( len(list( tr.state_assignments)), 0 ) tr = On('SP0') - self.assertEquals( len(list( tr.event_outputs)), 0 ) - self.assertEquals( len(list( tr.state_assignments)), 0 ) + self.assertEqual( len(list( tr.event_outputs)), 0 ) + self.assertEqual( len(list( tr.state_assignments)), 0 ) tr = On('V>0', do=OutputEvent('spike') ) - self.assertEquals( len(list( tr.event_outputs)), 1 ) - self.assertEquals( len(list( tr.state_assignments)), 0 ) + self.assertEqual( len(list( tr.event_outputs)), 1 ) + self.assertEqual( len(list( tr.state_assignments)), 0 ) tr = On('SP0', do=OutputEvent('spike') ) - self.assertEquals( len(list( tr.event_outputs)), 1 ) - self.assertEquals( len(list( tr.state_assignments)), 0 ) + self.assertEqual( len(list( tr.event_outputs)), 1 ) + self.assertEqual( len(list( tr.state_assignments)), 0 ) tr = On('V>0', do=[OutputEvent('spike')] ) - self.assertEquals( len(list( tr.event_outputs)), 1 ) - self.assertEquals( len(list( tr.state_assignments)), 0 ) + self.assertEqual( len(list( tr.event_outputs)), 1 ) + self.assertEqual( len(list( tr.state_assignments)), 0 ) tr = On('SP0', do=[OutputEvent('spike')] ) - self.assertEquals( len(list( tr.event_outputs)), 1 ) - self.assertEquals( len(list( tr.state_assignments)), 0 ) + self.assertEqual( len(list( tr.event_outputs)), 1 ) + self.assertEqual( len(list( tr.state_assignments)), 0 ) tr = On('V>0', do=['y=2', OutputEvent('spike'), 'x=1'] ) - self.assertEquals( len(list( tr.event_outputs)), 1 ) - self.assertEquals( len(list( tr.state_assignments)), 2 ) + self.assertEqual( len(list( tr.event_outputs)), 1 ) + self.assertEqual( len(list( tr.state_assignments)), 2 ) tr = On('SP0', do=['y=2', OutputEvent('spike'), 'x=1'] ) - self.assertEquals( len(list( tr.event_outputs)), 1 ) - self.assertEquals( len(list( tr.state_assignments)), 2 ) + self.assertEqual( len(list( tr.event_outputs)), 1 ) + self.assertEqual( len(list( tr.state_assignments)), 2 ) @@ -242,7 +242,7 @@ python_func = c.trigger.rhs_as_python_func(namespace=namespace) param_dict = dict([ (v, namespace[v]) for v in expt_vars]) - self.assertEquals(return_values[i], python_func(**param_dict) ) + self.assertEqual(return_values[i], python_func(**param_dict) ) @@ -386,8 +386,8 @@ self.assertRaises( NineMLRuntimeError, OnEvent,'MyEvent1 2') self.assertRaises( NineMLRuntimeError, OnEvent,'MyEvent1* ') - self.assertEquals( OnEvent(' MyEvent1 ').src_port_name, 'MyEvent1' ) - self.assertEquals( OnEvent(' MyEvent2').src_port_name, 'MyEvent2' ) + self.assertEqual( OnEvent(' MyEvent1 ').src_port_name, 'MyEvent1' ) + self.assertEqual( OnEvent(' MyEvent2').src_port_name, 'MyEvent2' ) @@ -439,12 +439,12 @@ from nineml.exceptions import NineMLRuntimeError r = Regime(name = 'R1') - self.assertEquals( set( r.on_conditions ), setRefactoringTool: No changes to ./test/unit/nineml_test/abstraction_layer/component/conditions_test.py RefactoringTool: Refactored ./test/unit/nineml_test/abstraction_layer/component/componentqueryer_test.py () ) + self.assertEqual( set( r.on_conditions ), set() ) self.assertRaises( NineMLRuntimeError, r.add_on_condition, OnEvent('sp1') ) r.add_on_condition( OnCondition('sp1>0') ) - self.assertEquals( len(set( r.on_conditions )), 1 ) - self.assertEquals( len(set( r.on_events )), 0 ) - self.assertEquals( len(set( r.transitions )), 1 ) + self.assertEqual( len(set( r.on_conditions )), 1 ) + self.assertEqual( len(set( r.on_events )), 0 ) + self.assertEqual( len(set( r.transitions )), 1 ) @@ -463,12 +463,12 @@ from nineml.abstraction_layer import OnCondition,OnEvent from nineml.exceptions import NineMLRuntimeError r = Regime(name = 'R1') - self.assertEquals( set( r.on_events ), set() ) + self.assertEqual( set( r.on_events ), set() ) self.assertRaises( NineMLRuntimeError, r.add_on_event, OnCondition('sp1>1') ) r.add_on_event( OnEvent('sp') ) - self.assertEquals( len(set( r.on_events )), 1 ) - self.assertEquals( len(set( r.on_conditions )), 0 ) - self.assertEquals( len(set( r.transitions )), 1 ) + self.assertEqual( len(set( r.on_events )), 1 ) + self.assertEqual( len(set( r.on_conditions )), 0 ) + self.assertEqual( len(set( r.transitions )), 1 ) def test_get_next_name(self): @@ -530,7 +530,7 @@ 'dX2/dt=0', name = 'r1') - self.assertEquals( + self.assertEqual( set([td.dependent_variable for td in r.time_derivatives]), set(['X1','X2']) ) --- ./test/unit/nineml_test/abstraction_layer/component/componentqueryer_test.py (original) +++ ./test/unit/nineml_test/abstraction_layer/component/componentqueryer_test.py (refactored) @@ -34,12 +34,12 @@ ] ), ) - self.assertEquals( len(c.query.event_recv_ports), 1 ) - self.assertEquals( (list(c.query.event_recv_ports)[0]).name, 'in_ev1' ) - - self.assertEquals( len(c.query.event_send_ports), 2 ) - self.assertEquals( (list(c.query.event_send_ports)[0]).name, 'ev_port1' ) - self.assertEquals( (list(c.query.event_send_ports)[1]).name, 'ev_port2' ) + self.assertEqual( len(c.query.event_recv_ports), 1 ) + self.assertEqual( (list(c.query.event_recv_ports)[0]).name, 'in_ev1' ) + + self.assertEqual( len(c.query.event_send_ports), 2 ) + self.assertEqual( (list(c.query.event_send_ports)[0]).name, 'ev_port1' ) + self.assertEqual( (list(c.query.event_send_ports)[1]).name, 'ev_port2' ) # Check inference of output event ports: c = ComponentClass( @@ -60,14 +60,14 @@ ) ] ) - self.assertEquals( len(c.query.event_recv_ports), 2 ) - self.assertEquals( (list(c.query.event_recv_ports)[0]).name, 'in_ev1' ) - self.assertEquals( (list(c.query.event_recv_ports)[1]).name, 'in_ev2' ) - - self.assertEquals( len(c.query.event_send_ports), 3 ) - self.assertEquals( (list(c.query.event_send_ports)[0]).name, 'ev_port1' ) - self.assertEquals( (list(c.query.event_send_ports)[1]).name, 'ev_port2' ) - self.assertEquals( (list(c.query.event_send_ports)[2]).name, 'ev_port3' ) + self.assertEqual( len(c.query.event_recv_ports), 2 ) + self.assertEqual( (list(c.query.event_recv_ports)[0]).name, 'in_ev1' ) + self.assertEqual( (list(c.query.event_recv_ports)[1]).name, 'in_ev2' ) + + self.assertEqual( len(c.query.event_send_ports), 3 ) + self.assertEqual( (list(c.query.event_send_ports)[0]).name, 'ev_port1' ) + self.assertEqual( (list(c.query.event_send_ports)[1]).name, 'ev_port2' ) + self.assertEqual( (list(c.query.event_send_ports)[2]).name, 'ev_port3' ) # Check inference of output event ports: @@ -90,15 +90,15 @@ ) ] ) - self.assertEquals( len(c.query.RefactoringTool: Refactored ./test/unit/nineml_test/abstraction_layer/component/component_test.py event_recv_ports), 3 ) - self.assertEquals( (list(c.query.event_recv_ports)[0]).name, 'spikeinput1' ) - self.assertEquals( (list(c.query.event_recv_ports)[1]).name, 'spikeinput2' ) - self.assertEquals( (list(c.query.event_recv_ports)[2]).name, 'spikeinput3' ) - - self.assertEquals( len(c.query.event_send_ports), 3 ) - self.assertEquals( (list(c.query.event_send_ports)[0]).name, 'ev_port1' ) - self.assertEquals( (list(c.query.event_send_ports)[1]).name, 'ev_port2' ) - self.assertEquals( (list(c.query.event_send_ports)[2]).name, 'ev_port3' ) + self.assertEqual( len(c.query.event_recv_ports), 3 ) + self.assertEqual( (list(c.query.event_recv_ports)[0]).name, 'spikeinput1' ) + self.assertEqual( (list(c.query.event_recv_ports)[1]).name, 'spikeinput2' ) + self.assertEqual( (list(c.query.event_recv_ports)[2]).name, 'spikeinput3' ) + + self.assertEqual( len(c.query.event_send_ports), 3 ) + self.assertEqual( (list(c.query.event_send_ports)[0]).name, 'ev_port1' ) + self.assertEqual( (list(c.query.event_send_ports)[1]).name, 'ev_port2' ) + self.assertEqual( (list(c.query.event_send_ports)[2]).name, 'ev_port3' ) @@ -141,13 +141,13 @@ - self.assertEquals( list( a.query.get_fully_qualified_port_connections() ), + self.assertEqual( list( a.query.get_fully_qualified_port_connections() ), [( NamespaceAddress('b.d.A'),NamespaceAddress('F') )] ) - self.assertEquals( list( bNew.query.get_fully_qualified_port_connections() ), + self.assertEqual( list( bNew.query.get_fully_qualified_port_connections() ), [( NamespaceAddress('b.d.A'),NamespaceAddress('b.e.C') )] ) - self.assertEquals( list( cNew.query.get_fully_qualified_port_connections() ), + self.assertEqual( list( cNew.query.get_fully_qualified_port_connections() ), [( NamespaceAddress('c.G'),NamespaceAddress('c.f.D') )] ) @@ -187,8 +187,8 @@ ports = list(c.query.ports) port_names = [ p.name for p in ports] - self.assertEquals( len(port_names), 8 ) - self.assertEquals( set(port_names), + self.assertEqual( len(port_names), 8 ) + self.assertEqual( set(port_names), set(['A','B','C','spikeinput1', 'spikeinput2','spikeinput3','ev_port2','ev_port3']) ) @@ -269,25 +269,25 @@ - self.assertEquals( + self.assertEqual( set(a.query.recurse_all_components), set([a,bNew,cNew,dNew,eNew,fNew,gNew] ) ) - self.assertEquals( + self.assertEqual( set(bNew.query.recurse_all_components), set([bNew,dNew,eNew] ) ) - self.assertEquals( + self.assertEqual( set(cNew.query.recurse_all_components), set([cNew,fNew,gNew] ) ) - self.assertEquals( + self.assertEqual( set(dNew.query.recurse_all_components), set([dNew] ) ) - self.assertEquals( + self.assertEqual( set(eNew.query.recurse_all_components), set([eNew] ) ) - self.assertEquals( + self.assertEqual( set(fNew.query.recurse_all_components), set([fNew] ) ) - self.assertEquals( + self.assertEqual( set(gNew.query.recurse_all_components), set([gNew] ) ) --- ./test/unit/nineml_test/abstraction_layer/component/component_test.py (original) +++ ./test/unit/nineml_test/abstraction_layer/component/component_test.py (refactored) @@ -441,7 +441,7 @@ ] ), ) - self.assertEquals( len(c.event_ports), 2 ) + self.assertEqual( len(c.event_ports), 2 ) # Check inference of output event ports: c = ComponentClass( @@ -462,7 +462,7 @@ ) ] ) - self.assertEquals( len(c.event_ports), 3 ) + self.assertEqual( len(c.event_ports), 3 ) # Check inference of output event ports: @@ -484,7 +484,7 @@ ) ] ) - self.assertEquals( len(c.event_ports), 5 ) + self.assertEqual( len(c.event_ports), 5 ) # These are done in the Testflatten and ComponentFlattener_test @@ -528,28 +528,28 @@ fNew = a.get_subnode('c.f') gNew = a.get_subnode('c.g') - self.assertEquals( a.get_node_addr(), + self.assertEqual( a.get_node_addr(), NamespaceAddress.create_root()) - self.assertEquals( bNew.get_node_addr(), + self.assertEqual( bNew.get_node_addr(), NamespaceAddress('b') ) - self.assertEquals( cNew.get_node_addr(), + self.assertEqual( cNew.get_node_addr(), NamespaceAddress('c') ) - self.assertEquals( dNew.get_node_addr(), + self.assertEqual( dNew.get_node_addr(), NamespaceAddress('b.d') ) - self.assertEquals( eNew.get_node_addr(), + self.assertEqual( eNew.get_node_addr(), NamespaceAddress('b.e') ) - self.assertEquals( fNew.get_node_addr(), + self.assertEqual( fNew.get_node_addr(), NamespaceAddress('c.f') ) - self.assertEquals( gNew.get_node_addr(), + self.assertEqual( gNew.get_node_addr(), NamespaceAddress('c.g') ) - self.assertEquals( a.name, 'A') - self.assertEquals( bNew.name, 'B') - self.assertEquals( cNew.name, 'C') - self.assertEquals( dNew.name, 'D') - self.assertEquals( eNew.name, 'E') - self.assertEquals( fNew.name, 'F') - self.assertEquals( gNew.name, 'G') + self.assertEqual( a.name, 'A') + self.assertEqual( bNew.name, 'B') + self.assertEqual( cNew.name, 'C') + self.assertEqual( dNew.name, 'D') + self.assertEqual( eNew.name, 'E') + self.assertEqual( fNew.name, 'F') + self.assertEqual( gNew.name, 'G') @@ -599,28 +599,28 @@ fNew = a.get_subnode('c.f') gNew = a.get_subnode('c.g') - self.assertEquals( a.get_node_addr(), + self.assertEqual( a.get_node_addr(), NamespaceAddress.create_root()) - self.assertEquals( bNew.get_node_addr(), + self.assertEqual( bNew.get_node_addr(), NamespaceAddress('b') ) - self.assertEquals( cNew.get_node_addr(), + self.assertEqual( cNew.get_node_addr(), NamespaceAddress('c') ) - self.assertEquals( dNew.get_node_addr(), + self.assertEqual( dNew.get_node_addr(), NamespaceAddress('b.d') ) - self.assertEquals( eNew.get_node_addr(), + self.assertEqual( eNew.get_node_addr(), NamespaceAddress('b.e') ) - self.assertEquals( fNew.get_node_addr(), + self.assertEqual( fNew.get_node_addr(), NamespaceAddress('c.f') ) - self.assertEquals( gNew.get_node_addr(), + self.assertEqual( gNew.get_node_addr(), NamespaceAddress('c.g') ) - self.assertEquals( a.name, 'A') - self.assertEquals( bNew.name, 'B') - self.assertEquals( cNew.name, 'C') - self.assertEquals( dNew.name, 'D') - self.assertEquals( eNew.name, 'E') - self.assertEquals( fNew.name, 'F') - self.assertEquals( gNew.name, 'G') + self.assertEqual( a.name, 'A') + self.assertEqual( bNew.name, 'B') + self.assertEqual( cNew.name, 'C') + self.assertEqual( dNew.name, 'D') + self.assertEqual( eNew.name, 'E') + self.assertEqual( fNew.name, 'F') + sRefactoringTool: Refactored ./test/test_to_resolve/test_roundtripUL.py WARNING: couldn't encode ./test/test_to_resolve/test_roundtripUL.py's diff for your terminal RefactoringTool: Refactored ./test/test_to_resolve/test_docs.py RefactoringTool: Refactored ./test/test_to_resolve/test_AL_API.py RefactoringTool: Refactored ./test/functional/round_trip_xml_testing/test_components.py elf.assertEqual( gNew.name, 'G') self.assertRaises( NineMLRuntimeError, a.get_subnode, 'x' ) self.assertRaises( NineMLRuntimeError, a.get_subnode, 'a.' ) @@ -899,7 +899,7 @@ ) ) - self.assertEquals( len( list( c.transitions) ), 6 ) + self.assertEqual( len( list( c.transitions) ), 6 ) r_map = c.regimes_map r1 = r_map['r1'] @@ -907,17 +907,17 @@ r3 = r_map['r3'] r4 = r_map['r4'] - self.assertEquals( len( list(r1.transitions) ), 2 ) - self.assertEquals( len( list(r2.transitions) ), 1 ) - self.assertEquals( len( list(r3.transitions) ), 2 ) - self.assertEquals( len( list(r4.transitions) ), 1 ) + self.assertEqual( len( list(r1.transitions) ), 2 ) + self.assertEqual( len( list(r2.transitions) ), 1 ) + self.assertEqual( len( list(r3.transitions) ), 2 ) + self.assertEqual( len( list(r4.transitions) ), 1 ) target_regimes = lambda r: set([ tr.target_regime for tr in r.transitions]) - self.assertEquals( target_regimes(r1), set([r2,r3]) ) - self.assertEquals( target_regimes(r2), set([r3]) ) - self.assertEquals( target_regimes(r3), set([r3,r4]) ) - self.assertEquals( target_regimes(r4), set([r4]) ) + self.assertEqual( target_regimes(r1), set([r2,r3]) ) + self.assertEqual( target_regimes(r2), set([r3]) ) + self.assertEqual( target_regimes(r3), set([r3,r4]) ) + self.assertEqual( target_regimes(r4), set([r4]) ) --- ./test/test_to_resolve/test_roundtripUL.py (original) +++ ./test/test_to_resolve/test_roundtripUL.py (refactored) @@ -48,8 +48,8 @@ catalog + "networkstructures/2Dgrid.xml", {'fillOrder': ("sequential", None), 'aspectRatioXY': (1.0, "dimensionless"), --- ./test/test_to_resolve/test_docs.py (original) +++ ./test/test_to_resolve/test_docs.py (refactored) @@ -1,4 +1,4 @@ -from __future__ import with_statement + import doctest import unittest import os --- ./test/test_to_resolve/test_AL_API.py (original) +++ ./test/test_to_resolve/test_AL_API.py (refactored) @@ -315,7 +315,7 @@ lhs_s = ["dU/dt","U","U","U","U(V)"] to_s = ["U"]*5 - objs = map(expr_to_obj,exprs) + objs = list(map(expr_to_obj,exprs)) for e,lhs in zip(objs,lhs_s): assert e.lhs == lhs --- ./test/functional/round_trip_xml_testing/test_components.py (original) +++ ./test/functional/round_trip_xml_testing/test_components.py (refactored) @@ -30,7 +30,7 @@ def clear_and_recreate_dir(dir_name): - print ' -- Clearing the build_dir: %s'%dir_name + print(' -- Clearing the build_dir: %s'%dir_name) if os.path.exists(dir_name): shutil.rmtree(dir_name) os.mkdir(dir_name) @@ -43,17 +43,17 @@ build_dir = 'build/' output_dir = 'output/' - print 'Clearing output directory: %s' % output_dir + print('Clearing output directory: %s' % output_dir) clear_and_recreate_dir(output_dir) #single_file_mode = os.path.isfile(src) if src: - print ' Testing Component: %s'% src + print(' Testing Component: %s'% src) src_files = [src] else: - print ' Testing all Components.' + print(' Testing all Components.') src_files = TestableComponent.list_available() #src_files = glob.glob( src + '/*.py') @@ -65,7 +65,7 @@ clear_and_recreate_dir('nineml_mechanisms') # Load the file: - print ' -- Loading from file: %s' % src_file + print(' -- Loading from file: %s' % src_file) t = TestableComponent(src_file) # Run some tests: @@ -86,8 +86,8 @@ shutil.move(build_dir, output_dir) shutil.move( os.path.join(output_dir,build_dir), os.path.join(output_dir,src_file.replace('.py','') ) ) - print ' Everything Ran Fine' - print ' -------------------' + printRefactoringTool: No changes to ./test/functional/random_namespace_dev/test2.py RefactoringTool: No changes to ./test/functional/event_testing/test3.py RefactoringTool: No changes to ./test/functional/event_testing/test2.py RefactoringTool: No changes to ./test/functional/event_testing/test1.py RefactoringTool: Refactored ./nineml/user_layer.py (' Everything Ran Fine') + print(' -------------------') @@ -103,7 +103,7 @@ #LocationMgr.StdAppendToPath() component_modifiers.ComponentModifier.close_all_reduce_ports(component=component) - print ' -- Writing Component to .mod' + print(' -- Writing Component to .mod') modfilename = build_dir + component.name + '.mod' modfilename = modfilename.replace('-','_') writers.ModFileWriter.write( component = component, filename=modfilename ) --- ./nineml/user_layer.py (original) +++ ./nineml/user_layer.py (refactored) @@ -30,10 +30,11 @@ """ from itertools import chain -import urllib +import urllib.request, urllib.parse, urllib.error from lxml import etree from lxml.builder import E from operator import and_, or_ +from functools import reduce nineml_namespace = 'http://nineml.org/9ML/0.1' NINEML = "{%s}" % nineml_namespace @@ -48,7 +49,7 @@ local file. """ if not isinstance(url, file): - f = urllib.urlopen(url) + f = urllib.request.urlopen(url) doc = etree.parse(f) f.close() else: @@ -111,7 +112,7 @@ self.components[component.name] = component def _resolve_components(self): - for component in self.components.values(): + for component in list(self.components.values()): if component.unresolved: component.resolve(self.components[component.reference]) @@ -152,7 +153,7 @@ for child in element.findall(NINEML+Group.element_name): group = Group.from_xml(child, components, groups) model.groups[group.name] = group - for name, c in components.items(): + for name, c in list(components.items()): assert isinstance(c, BaseComponent), "%s is %s" % (name, c) model.components = components model._resolve_components() @@ -165,9 +166,9 @@ # this should determine where references can be used to avoid duplication assert len(self._unresolved) == 0, str(self._unresolved) root = E("nineml", xmlns=nineml_namespace, name=self.name) - for component in self.components.values(): + for component in list(self.components.values()): root.append(component.to_xml()) - for group in self.groups.values(): + for group in list(self.groups.values()): root.append(group.to_xml()) return root @@ -175,7 +176,7 @@ """ Export this model to a file in 9ML XML format. """ - assert isinstance(filename, basestring) or (hasattr(filename, "seek") and hasattr(filename, "read")) + assert isinstance(filename, str) or (hasattr(filename, "seek") and hasattr(filename, "read")) etree.ElementTree(self.to_xml()).write(filename, encoding="UTF-8", pretty_print=True, xml_declaration=True) @@ -184,8 +185,8 @@ Export the model to XML, read it back in, and check that the model is unchanged. """ - import StringIO - f = StringIO.StringIO() + import io + f = io.StringIO() self.write(f) f.seek(0) new_model = self.__class__.from_xml(etree.parse(f).getroot()) @@ -215,7 +216,7 @@ return hash(self.url) def retrieve(self): - f = urllib.urlopen(self.url) + f = urllib.request.urlopen(self.url) content = f.read() f.close() return content @@ -254,12 +255,12 @@ if isinstance(definition, Definition): self.definition = definition assert reference is None, "Cannot give both definition and reference." - elif isinstance(definition, basestring): # should also check is a valid uri + elif isinstance(definition, str): # should also check is a valid uri self.definition = Definition(url=definition) assert reference is None, "Cannot give both definition and reference." elif definition is None: assert reference is not None, "Either definition or reference must be given." - assert isinstance(reference, basestring), "reference should be the name of a component" + assert isinstance(reference, str), "reference should be the name of a component" self.definition = None else: raise TypeError("definition must be a Definition, a Component or a url") @@ -518,7 +519,7 @@ """ for parameter in parameters: self[parameter.name] = parameter # should perhaps do a copy - for name, (value, unit) in kwparameters.items(): + for name, (value, unit) in list(kwparameters.items()): self[name] = Parameter(name, value, unit) def __hash__(self): @@ -532,16 +533,16 @@ Pull parameters from another parameter set into this one, if they do not already exist in this one. """ - for name,parameter in other_parameter_set.items(): + for name,parameter in list(other_parameter_set.items()): if name not in self: self[name] = parameter # again, should perhaps copy def get_random_distributions(self): - return [p.value for p in self.values() if p.is_random()] + return [p.value for p in list(self.values()) if p.is_random()] def to_xml(self): return E(self.element_name, - *[p.to_xml() for p in self.values()]) + *[p.to_xml() for p in list(self.values())]) @classmethod def from_xml(cls, element, components): @@ -620,7 +621,7 @@ raise Exception("Groups may only contain Populations, Projections, Selections or Groups") def _resolve_population_references(self): - for prj in self.projections.values(): + for prj in list(self.projections.values()): for name in ('source', 'target'): if prj.references[name] in self.populations: obj = self.populations[prj.references[name]] @@ -634,19 +635,19 @@ def get_components(self): components = [] - for p in chain(self.populations.values(), self.projections.values()): + for p in chain(list(self.populations.values()), list(self.projections.values())): components.extend(p.get_components()) return components def get_subgroups(self): - return [p.prototype for p in self.populations.values() if isinstance(p.prototype, Group)] + return [p.prototype for p in list(self.populations.values()) if isinstance(p.prototype, Group)] def to_xml(self): return E(self.element_name, name=self.name, - *[p.to_xml() for p in chain(self.populations.values(), - self.selections.values(), - self.projections.values())]) + *[p.to_xml() for p in chain(list(self.populations.values()), + list(self.selections.values()), + list(self.projections.values()))]) @classmethod def from_xml(cls, element, components, groups): @@ -676,7 +677,7 @@ If given component does not exist, we create it and replace the XML in `components` with the actual component. We then return the component. """ - assert ref in components, "%s not in %s" % (ref, components.keys()) + assert ref in components, "%s not in %s" % (ref, list(components.keys())) if not isinstance(components[ref], BaseComponent): components[ref] = cls.from_xml(components[ref], components) return components[ref] @@ -843,7 +844,7 @@ def to_xml(self): operand_elements = [] for c in self.operands: - if isinstance(c, (basestring, float, int)): + if isinstance(c, (str, float, int)): operand_elements.append(E(Value.element_name, str(c))) else: operand_elements.append(c.to_xml()) @@ -876,7 +877,7 @@ }[element.tag].from_xml(elementRefactoringTool: Refactored ./nineml/__init__.py RefactoringTool: Refactored ./nineml/utility/__init__.py RefactoringTool: Refactored ./nineml/maths/__init__.py RefactoringTool: Refactored ./nineml/exceptions/exceptions.py , components) def qstr(obj): - if isinstance(obj, basestring): + if isinstance(obj, str): return '"%s"' % obj else: return obj.__str__() @@ -1001,7 +1002,7 @@ attr = getattr(self, name) if isinstance(attr, cls_list): self.references[name] = attr.name - elif isinstance(attr, basestring): + elif isinstance(attr, str): setattr(self, name, None) self.references[name] = attr else: --- ./nineml/__init__.py (original) +++ ./nineml/__init__.py (refactored) @@ -1,9 +1,9 @@ #__version__ = "0.1pre ($Revision: 500 $)".replace(" ($R","").replace("evision: ","-").replace(" $)", "") __version__ = "0.1.0" -import maths -import exceptions -import utility -import abstraction_layer +from . import maths +from . import exceptions +from . import utility +from . import abstraction_layer -import abstraction_layer as al +from . import abstraction_layer as al --- ./nineml/utility/__init__.py (original) +++ ./nineml/utility/__init__.py (refactored) @@ -28,7 +28,7 @@ if error_func: if isinstance(error_func, Exception): raise error_func - elif isinstance(error_func, basestring): + elif isinstance(error_func, str): raise NineMLRuntimeError(error_func) else: error_func() @@ -36,7 +36,7 @@ else: if isinstance(default_error, Exception): raise default_error - elif isinstance(default_error, basestring): + elif isinstance(default_error, str): raise NineMLRuntimeError(default_error) else: default_error() @@ -262,13 +262,13 @@ It checks to make sure that no values are duplicated before converting. """ - for v in dct.values(): + for v in list(dct.values()): if not _is_hashable(v): err = "Can't invert a dictionary containing unhashable keys" raise NineMLRuntimeError(err) - assert_no_duplicates( dct.values() ) - return dict( zip(dct.values(), dct.keys()) ) + assert_no_duplicates( list(dct.values()) ) + return dict( list(zip(list(dct.values()), list(dct.keys()))) ) def flatten_first_level( nested_list ): @@ -281,7 +281,7 @@ [1,2,3,4,5,6] """ - if isinstance(nested_list, basestring): + if isinstance(nested_list, str): err = "Shouldn't pass a string to flatten_first_level." err +="Use list(str) instead" raise NineMLRuntimeError(err) @@ -311,8 +311,8 @@ NineMLRuntimeError: Key Collision while merging dictionarys """ - kv_pairs = list( itertools.chain(*[d.iteritems() for d in dictionaries])) - keys, values = zip( *kv_pairs ) + kv_pairs = list( itertools.chain(*[iter(d.items()) for d in dictionaries])) + keys, values = list(zip( *kv_pairs )) assert_no_duplicates(keys, 'Key collision while merging dictionarys') return dict(kv_pairs) @@ -427,13 +427,13 @@ def ensure_iterable( expected_list ): - if isinstance(expected_list, basestring): + if isinstance(expected_list, str): return [expected_list,] try: for obj in expected_list: pass return expected_list - except TypeError, e: + except TypeError as e: return [expected_list,] assert False, 'Unreachable Code' --- ./nineml/maths/__init__.py (original) +++ ./nineml/maths/__init__.py (refactored) @@ -89,11 +89,11 @@ def is_builtin_math_constant( constname ): - assert isinstance( constname, basestring) + assert isinstance( constname, str) return constname in _constants def is_builtin_math_function( funcname ): - assert isinstance( funcname, basestring) + assert isinstance( funcname, str) # Is it a standard mathematical function (cos,sin,etc) if funcname in _functions: return True --- ./nineml/exceptions/exceptions.py (original) +++ ./nineml/exceptions/exceptions.py (refactored) @@ -9,7 +9,7 @@ def raise_exception( exception = None ): if exception: -RefactoringTool: Refactored ./nineml/exceptions/__init__.py RefactoringTool: Refactored ./nineml/examples/UL/simple_example.py WARNING: couldn't encode ./nineml/examples/UL/simple_example.py's diff for your terminal RefactoringTool: Refactored ./nineml/examples/UL/nested_example.py WARNING: couldn't encode ./nineml/examples/UL/nested_example.py's diff for your terminal RefactoringTool: No changes to ./nineml/examples/AL/doc_tutorials/example3_cobasynapse.py RefactoringTool: No changes to ./nineml/examples/AL/doc_tutorials/example2_leaky_iaf_2regime.py RefactoringTool: No changes to ./nineml/examples/AL/doc_tutorials/example1c_izikevich_transition.py RefactoringTool: No changes to ./nineml/examples/AL/doc_tutorials/example1b_izikevich_statevariables.py RefactoringTool: No changes to ./nineml/examples/AL/doc_tutorials/example1_izikevich_interface.py RefactoringTool: No changes to ./nineml/examples/AL/demos/demo2_poisson_spike_gen.py RefactoringTool: No changes to ./nineml/examples/AL/demos/demo1b_load_save_izekevich.py RefactoringTool: No changes to ./nineml/examples/AL/demos/demo1a_load_save_coba1.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/simple_current_clamp.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/nmda.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/morris_lecar.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/leaky_iaf.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/izhikevich2.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/izhikevich.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/if_cond_exp.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/iaf_sfa_relref.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/iaf.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/hierachical_iaf_nmda.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/hierachical_iaf_3coba.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/hierachical_iaf_2coba.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/hierachical_iaf_1coba.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/hh.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/destexhe_ampa.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/coba_synapse.py RefactoringTool: No changes to ./nineml/examples/AL/components_done/aeIF.py RefactoringTool: No changes to ./nineml/abstraction_layer/xmlns.py RefactoringTool: Refactored ./nineml/abstraction_layer/util.py RefactoringTool: Refactored ./nineml/abstraction_layer/__init__.py RefactoringTool: No changes to ./nineml/abstraction_layer/writers/xml_writer.py RefactoringTool: No changes to ./nineml/abstraction_layer/writers/text_writer.py RefactoringTool: Refactored ./nineml/abstraction_layer/writers/mod_file_writer.py RefactoringTool: No changes to ./nineml/abstraction_layer/writers/dot_writer.py RefactoringTool: Refactored ./nineml/abstraction_layer/writers/__init__.py RefactoringTool: Refactored ./nineml/abstraction_layer/visitors/cloner.py if isinstance(exception, basestring): + if isinstance(exception, str): raise NineMLRuntimeError(exception) else: raise exception --- ./nineml/exceptions/__init__.py (original) +++ ./nineml/exceptions/__init__.py (refactored) @@ -1 +1 @@ -from exceptions import internal_error, raise_exception, NineMLRuntimeError +from .exceptions import internal_error, raise_exception, NineMLRuntimeError --- ./nineml/examples/UL/simple_example.py (original) +++ ./nineml/examples/UL/simple_example.py (refactored) @@ -40,8 +40,8 @@ catalog + "networkstructures/2Dgrid.xml", {'fillOrder': ("sequential", None), 'aspectRatioXY': (1.0, "dimensionless"), --- ./nineml/examples/UL/nested_example.py (original) +++ ./nineml/examples/UL/nested_example.py (refactored) @@ -27,13 +27,13 @@ definition=catalog + "networkstructures/2Dgrid.xml", parameters={'fillOrder': ("sequential", None), 'aspectRatioXY': (1.0, "dimensionless"), --- ./nineml/abstraction_layer/util.py (original) +++ ./nineml/abstraction_layer/util.py (refactored) @@ -1,10 +1,10 @@ -import component +from . import component def check_flat_component( func ): def newfunc(*args,**kwargs): - print args - print kwargs + print(args) + print(kwargs) if 'component' in kwargs: comp = kwargs['component'] assert isinstance( comp, component.ComponentClass) --- ./nineml/abstraction_layer/__init__.py (original) +++ ./nineml/abstraction_layer/__init__.py (refactored) @@ -5,17 +5,17 @@ Copyright Andrew P. Davison, Eilif B. Muller, 2010, Michael Hull, 2011 # if you edit this file, add your name here """ -from xmlns import * +from .xmlns import * from nineml import __version__ -from component import * -import component +from .component import * +from . import component -import visitors -import readers -import writers -import validators -import component_modifiers -import flattening +from . import visitors +from . import readers +from . import writers +from . import validators +from . import component_modifiers +from . import flattening -import testing_utils +from . import testing_utils --- ./nineml/abstraction_layer/writers/mod_file_writer.py (original) +++ ./nineml/abstraction_layer/writers/mod_file_writer.py (refactored) @@ -14,7 +14,7 @@ cwd = os.getcwd() os.chdir( directory ) - print 'Compile_modfiles:', os.getcwd() + print('Compile_modfiles:', os.getcwd()) try: --- ./nineml/abstraction_layer/writers/__init__.py (original) +++ ./nineml/abstraction_layer/writers/__init__.py (refactored) @@ -1,8 +1,8 @@ -from xml_writer import XMLWriter +from .xml_writer import XMLWriter #from text_writer import dump_reduced -from text_writer import TextWriter -from dot_writer import DotWriter -from mod_file_writer import ModFileWriter +from .text_writer import TextWriter +from .dot_writer import DotWriter +from .mod_file_writer import ModFileWriter --- ./nineml/abstraction_layer/visitors/cloner.py (original) +++ ./nineml/abstraction_layer/visitors/cloner.py (refactored) @@ -1,6 +1,6 @@ -from base import ActionVisitor, ComponentVisitor +from .base import ActionVisitor, ComponentVisitor from itertools import chain @@ -197,7 +197,7 @@ analog_ports= [ p.accept_visitor(self, **kwargs) for p in component.analog_ports], event_ports = [ p.accept_visitor(self, **kwargs) for p in component.event_ports ], dynamics = component.dynamics.accept_visitor(self, **kwargs) if component.dynamics else None, - subnodes = dict( [ (k, v.accept_visitor(self, **kwargs)) for (k, v) in component.subnodes.iteritems() ] ), + subnodes = dict( [ (k, v.accept_visitor(self, **kwargs)) for (k, v) in component.subnodes.items() ] ), RefactoringTool: Refactored ./nineml/abstraction_layer/visitors/base.py RefactoringTool: Refactored ./nineml/abstraction_layer/visitors/__init__.py RefactoringTool: Refactored ./nineml/abstraction_layer/validators/equality_checker.py portconnections = component.portconnections[:] ) return ccn @@ -345,7 +345,7 @@ analog_ports= [ p.accept_visitor(self, **kwargs) for p in component.analog_ports], event_ports = [ p.accept_visitor(self, **kwargs) for p in component.event_ports ], dynamics = component.dynamics.accept_visitor(self, **kwargs) if component.dynamics else None, - subnodes = dict( [ (k, v.accept_visitor(self, **kwargs)) for (k, v) in component.subnodes.iteritems() ] ), + subnodes = dict( [ (k, v.accept_visitor(self, **kwargs)) for (k, v) in component.subnodes.items() ] ), portconnections = port_connections ) --- ./nineml/abstraction_layer/visitors/base.py (original) +++ ./nineml/abstraction_layer/visitors/base.py (refactored) @@ -30,7 +30,7 @@ if component.dynamics: component.dynamics.accept_visitor(self,**kwargs) - for subnode in component.subnodes.values(): + for subnode in list(component.subnodes.values()): subnode.accept_visitor(self, **kwargs) --- ./nineml/abstraction_layer/visitors/__init__.py (original) +++ ./nineml/abstraction_layer/visitors/__init__.py (refactored) @@ -1,5 +1,5 @@ -from base import ComponentVisitor -from cloner import ClonerVisitor, ActionVisitor, ClonerVisitorPrefixNamespace -from cloner import ExpandAliasDefinition, ExpandPortDefinition -from cloner import RenameSymbol +from .base import ComponentVisitor +from .cloner import ClonerVisitor, ActionVisitor, ClonerVisitorPrefixNamespace +from .cloner import ExpandAliasDefinition, ExpandPortDefinition +from .cloner import RenameSymbol --- ./nineml/abstraction_layer/validators/equality_checker.py (original) +++ ./nineml/abstraction_layer/validators/equality_checker.py (refactored) @@ -21,12 +21,12 @@ def assert_equal( o1, o2, msg= '' ): - if not isinstance(o1, (types.NoneType, basestring)): - print o1, o2 + if not isinstance(o1, (type(None), str)): + print(o1, o2) assert not (o1 is o2) assert type(o1) == type(o2) - assert isinstance(o1, (basestring, types.NoneType)) + assert isinstance(o1, (str, type(None))) if o1 == o2: return @@ -78,16 +78,16 @@ # Analog Ports: Check Modes & reduce ops: ap1Dict = safe_dict([ (ap.name, ap) for ap in comp1.analog_ports ]) ap2Dict = safe_dict([ (ap.name, ap) for ap in comp2.analog_ports ]) - assert_equal_list( ap1Dict.keys(), ap2Dict.keys() ) - for portname in ap1Dict.keys(): + assert_equal_list( list(ap1Dict.keys()), list(ap2Dict.keys()) ) + for portname in list(ap1Dict.keys()): assert_equal( ap1Dict[portname].mode, ap2Dict[portname].mode ) assert_equal( ap1Dict[portname].reduce_op, ap2Dict[portname].reduce_op ) # Event Ports: Check Modes & reduce ops: ev1Dict = safe_dict([ (ev.name, ev) for ev in comp1.event_ports ]) ev2Dict = safe_dict([ (ev.name, ev) for ev in comp2.event_ports ]) - assert_equal_list( ev1Dict.keys(), ev2Dict.keys() ) - for portname in ev1Dict.keys(): + assert_equal_list( list(ev1Dict.keys()), list(ev2Dict.keys()) ) + for portname in list(ev1Dict.keys()): assert_equal( ev1Dict[portname].mode, ev2Dict[portname].mode ) assert_equal( ev1Dict[portname].reduce_op, ev2Dict[portname].reduce_op ) @@ -96,8 +96,8 @@ # ------------------------------------------- # # Recurse over subnamespaces: - assert_equal_list( comp1.subnodes.keys(), comp2.subnodes.keys() ) - for subnamespace in comp1.subnodes.keys(): + assert_equal_list( list(comp1.subnodes.keys()), list(comp2.subnodes.keys()) ) + for subnamespace in list(comp1.subnodes.keys()): subcomp1 = comp1.subnodes[subnamespace] subcomp2 = comp2.subnodes[subnamespace] RefactoringTool: Refactored ./nineml/abstraction_layer/validators/cv_regimenames.py RefactoringTool: Refactored ./nineml/abstraction_layer/validators/cv_ports.py check_equal_component( subcomp1, subcomp2 ) @@ -131,8 +131,8 @@ rgm1Dict = d1.regimes_map rgm2Dict = d2.regimes_map - assert_equal_list( rgm1Dict.keys(), rgm2Dict.keys() ) - for regime_name in rgm1Dict.keys(): + assert_equal_list( list(rgm1Dict.keys()), list(rgm2Dict.keys()) ) + for regime_name in list(rgm1Dict.keys()): rgm1 = rgm1Dict[regime_name] rgm2 = rgm2Dict[regime_name] cls.check_equal_regime( rgm1, rgm2) @@ -147,8 +147,8 @@ # Check the OnEvents: on_event1dict = safe_dict([ (ev.src_port_name, ev) for ev in rgm1.on_events ]) on_event2dict = safe_dict([ (ev.src_port_name, ev) for ev in rgm2.on_events ]) - assert_equal_list( on_event1dict.keys(), on_event2dict.keys() ) - for eventport in on_event1dict.keys(): + assert_equal_list( list(on_event1dict.keys()), list(on_event2dict.keys()) ) + for eventport in list(on_event1dict.keys()): ev1 = on_event1dict[eventport] ev2 = on_event2dict[eventport] cls.check_equal_transitions(ev1, ev2) @@ -159,8 +159,8 @@ # condition.rhs ] on_condition1dict = safe_dict([ (cond.trigger.rhs, cond) for cond in rgm1.on_conditions ]) on_condition2dict = safe_dict([ (cond.trigger.rhs, cond) for cond in rgm2.on_conditions ]) - assert_equal_list( on_condition1dict.keys(), on_condition2dict.keys() ) - for condition_trigger_rhs in on_condition1dict.keys(): + assert_equal_list( list(on_condition1dict.keys()), list(on_condition2dict.keys()) ) + for condition_trigger_rhs in list(on_condition1dict.keys()): on_cond1 = on_condition1dict[condition_trigger_rhs] on_cond2 = on_condition2dict[condition_trigger_rhs] cls.check_equal_transitions(on_cond1, on_cond2) --- ./nineml/abstraction_layer/validators/cv_regimenames.py (original) +++ ./nineml/abstraction_layer/validators/cv_regimenames.py (refactored) @@ -1,5 +1,5 @@ -from base import ComponentValidatorPerNamespace +from .base import ComponentValidatorPerNamespace import nineml.utility class ComponentValidatorDuplicateRegimeNames(ComponentValidatorPerNamespace): --- ./nineml/abstraction_layer/validators/cv_ports.py (original) +++ ./nineml/abstraction_layer/validators/cv_ports.py (refactored) @@ -28,28 +28,28 @@ self.visit(component) # Check that each output event has a corresponding event_port with a send mode: - for ns, output_events in self.output_events.iteritems(): + for ns, output_events in self.output_events.items(): for output_event in output_events: assert output_event in self.events_ports[ns], "Can't find port definition matching OP-Event: %s"%output_event assert self.events_ports[ns][output_event].mode == 'send' # Check that each input event has a corresponding event_port with a recv/reduce mode: - for ns, input_events in self.input_events.iteritems(): + for ns, input_events in self.input_events.items(): for input_event in input_events: assert input_event in self.events_ports[ns] assert self.events_ports[ns][input_event].mode in ('recv','reduce') #Check that each Event port emits/recieves at least one - for ns, event_ports in self.events_ports.iteritems(): - for evt_port_name in event_ports.keys(): + for ns, event_ports in self.events_ports.items(): + for evt_port_name in list(event_ports.keys()): op_evts_on_port = [ ev for ev in self.output_events[ns] if ev==evt_port_name] ip_evts_on_port = [ ev for ev in self.input_events[ns] if ev==evt_port_name] if len(op_evts_on_port) + len(ip_evts_on_port) == 0: - print 'Unable to find events generated for: ', ns, evt_port_name + print('Unable to fRefactoringTool: Refactored ./nineml/abstraction_layer/validators/cv_namingconflicts.py RefactoringTool: Refactored ./nineml/abstraction_layer/validators/cv_general.py ind events generated for: ', ns, evt_port_name) def action_eventport(self, port, namespace, **kwargs): @@ -87,7 +87,7 @@ self.visit(component) - for namespace, analogports in self.output_analogports.iteritems(): + for namespace, analogports in self.output_analogports.items(): for ap in analogports: if not ap in self.available_symbols[namespace]: raise NineMLRuntimeError('Unable to find an Alias or State variable for analog-port: %s'%ap ) --- ./nineml/abstraction_layer/validators/cv_namingconflicts.py (original) +++ ./nineml/abstraction_layer/validators/cv_namingconflicts.py (refactored) @@ -4,7 +4,7 @@ from nineml.utility import * from collections import defaultdict -from base import ComponentValidatorPerNamespace +from .base import ComponentValidatorPerNamespace --- ./nineml/abstraction_layer/validators/cv_general.py (original) +++ ./nineml/abstraction_layer/validators/cv_general.py (refactored) @@ -2,7 +2,7 @@ from collections import defaultdict -from base import ComponentValidatorPerNamespace +from .base import ComponentValidatorPerNamespace import nineml from nineml.exceptions import NineMLRuntimeError @@ -22,7 +22,7 @@ self.visit(component) - for namespace, time_derivatives in self.time_derivatives_used.iteritems(): + for namespace, time_derivatives in self.time_derivatives_used.items(): for td in time_derivatives: if not td in self.sv_declared[namespace]: err = 'StateVariable not declared: %s'%td @@ -49,7 +49,7 @@ self.visit(component) - for namespace, state_assignments_lhs in self.state_assignments_lhses.iteritems(): + for namespace, state_assignments_lhs in self.state_assignments_lhses.items(): for td in state_assignments_lhs: if not td in self.sv_declared[namespace]: err = 'Not Assigning to state-variable: %s'%state_assignment @@ -86,7 +86,7 @@ return len(unresolved) != 0 def get_resolved_aliases( ): - return [alias for alias in unresolved_aliases.values() if not alias_contains_unresolved_symbols(alias) ] + return [alias for alias in list(unresolved_aliases.values()) if not alias_contains_unresolved_symbols(alias) ] while( unresolved_aliases ): @@ -99,7 +99,7 @@ else: errmsg = "Unable to resolve all aliases in %s. " % namespace errmsg += "You may have a recursion issue." - errmsg += "Remaining Aliases: %s"% ','.join(unresolved_aliases.keys()) + errmsg += "Remaining Aliases: %s"% ','.join(list(unresolved_aliases.keys())) raise nineml.exceptions.NineMLRuntimeError(errmsg) @@ -125,7 +125,7 @@ excludes = nineml.maths.get_reserved_and_builtin_symbols() # Check Aliases: - for ns, aliases in self.aliases.iteritems(): + for ns, aliases in self.aliases.items(): for alias in aliases: for rhs_atom in alias.rhs_atoms: if rhs_atom in excludes: @@ -135,7 +135,7 @@ raise nineml.exceptions.NineMLRuntimeError(err) #Check TimeDerivatives: - for ns, timederivatives in self.time_derivatives.iteritems(): + for ns, timederivatives in self.time_derivatives.items(): for timederivative in timederivatives: for rhs_atom in timederivative.rhs_atoms: if not rhs_atom in self.available_symbols[ns] and not rhs_atom in excludes: @@ -143,7 +143,7 @@ raise nineml.exceptions.NineMLRuntimeError(err) # Check StateAssignments - for ns, state_assignments in self.state_assignments.iteritems(): + for ns, state_assignments in self.state_assignments.RefactoringTool: Refactored ./nineml/abstraction_layer/validators/component_validator.py RefactoringTool: No changes to ./nineml/abstraction_layer/validators/base.py RefactoringTool: Refactored ./nineml/abstraction_layer/validators/__init__.py RefactoringTool: Refactored ./nineml/abstraction_layer/testing_utils/testable_component.py items(): for state_assignment in state_assignments: for rhs_atom in state_assignment.rhs_atoms: if not rhs_atom in self.available_symbols[ns] and not rhs_atom in excludes: @@ -281,7 +281,7 @@ if not r in connected: add_connected_regimes_recursive( r, connected ) - for namespace, regimes in self.regimes_in_namespace.iteritems(): + for namespace, regimes in self.regimes_in_namespace.items(): # Perhaps we have no transition graph; this is OK: if len( regimes ) == 0:continue @@ -387,7 +387,7 @@ self.visit(component) def check_lhssymbol_is_valid(self, symbol): - assert isinstance( symbol, basestring) + assert isinstance( symbol, str) if not nineml.maths.is_valid_lhs_target(symbol) : err = 'Symbol: %s found on left-hand-side of an equation' --- ./nineml/abstraction_layer/validators/component_validator.py (original) +++ ./nineml/abstraction_layer/validators/component_validator.py (refactored) @@ -2,21 +2,21 @@ from nineml.utility import Settings -from cv_types import ComponentValidatorTypes -from cv_ports import ComponentValidatorEventPorts -from cv_ports import ComponentValidatorOutputAnalogPorts -from cv_namingconflicts import ComponentValidatorLocalNameConflicts -from cv_general import ComponentValidatorTimeDerivativesAreDeclared -from cv_general import ComponentValidatorNoDuplicatedObjects +from .cv_types import ComponentValidatorTypes +from .cv_ports import ComponentValidatorEventPorts +from .cv_ports import ComponentValidatorOutputAnalogPorts +from .cv_namingconflicts import ComponentValidatorLocalNameConflicts +from .cv_general import ComponentValidatorTimeDerivativesAreDeclared +from .cv_general import ComponentValidatorNoDuplicatedObjects #from cv_general import ComponentValidatorAliasesAndStateVariablesHaveNoUnResolvedSymbols -from cv_general import ComponentValidatorAssignmentsAliasesAndStateVariablesHaveNoUnResolvedSymbols -from cv_general import ComponentValidatorPortConnections -from cv_general import ComponentValidatorStateAssignmentsAreOnStateVariables -from cv_general import ComponentValidatorAliasesAreNotRecursive -from cv_general import ComponentValidatorRegimeGraph -from cv_general import ComponentValidatorRegimeOnlyHasOneHandlerPerEvent -from cv_general import ComponentValidatorCheckNoLHSAssignmentsToMathsNamespace -from cv_regimenames import ComponentValidatorDuplicateRegimeNames +from .cv_general import ComponentValidatorAssignmentsAliasesAndStateVariablesHaveNoUnResolvedSymbols +from .cv_general import ComponentValidatorPortConnections +from .cv_general import ComponentValidatorStateAssignmentsAreOnStateVariables +from .cv_general import ComponentValidatorAliasesAreNotRecursive +from .cv_general import ComponentValidatorRegimeGraph +from .cv_general import ComponentValidatorRegimeOnlyHasOneHandlerPerEvent +from .cv_general import ComponentValidatorCheckNoLHSAssignmentsToMathsNamespace +from .cv_regimenames import ComponentValidatorDuplicateRegimeNames class ComponentValidator(object): """Class for grouping all the component-validations tests together""" @@ -31,7 +31,7 @@ if not Settings.enable_component_validation : import os assert os.getlogin() == 'hull', """Checking only mike turns off component-validation :) """ - print " **** WARNING WARNIGN COMPONENT VALIDATION TURNRED OFF ****" + print(" **** WARNING WARNIGN COMPONENT VALIDATION TURNRED OFF ****") return #Check class structure: --- ./nineml/abstraction_layer/validators/__init__.py (original) +++ ./nineml/abstraction_layer/validators/__init__.py (refactored) @@ -1,2 +1,2 @@ -from component_validator import ComponentValidator -from equality_checker import ComponentEqualityChecker +from .component_validator import ComponentValidator +from .equality_checker import ComponentEqualityChecker --- ./nineml/abstraction_layer/testing_utils/testable_coRefactoringTool: Refactored ./nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py RefactoringTool: Refactored ./nineml/abstraction_layer/testing_utils/test_write_dot.py RefactoringTool: Refactored ./nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py mponent.py (original) +++ ./nineml/abstraction_layer/testing_utils/testable_component.py (refactored) @@ -14,7 +14,7 @@ """ if not os.path.exists(filename): - print "CWD:", os.getcwd() + print("CWD:", os.getcwd()) raise NineMLRuntimeError('File does not exist %s'%filename ) dirname,fname = os.path.split( filename ) @@ -76,7 +76,7 @@ self.mod = load_py_module(filename ) # Get the component functor: - if not cls.functor_name in self.mod.__dict__.keys(): + if not cls.functor_name in list(self.mod.__dict__.keys()): err = """Can't load TestableComponnet from %s"""% self.filename err+= """Can't find required method: %s""" % cls.functor_name raise NineMLRuntimeError(err) @@ -86,8 +86,8 @@ # Check the functor will actually return us an object: try: c = self.component_functor() - except Exception, e: - print e + except Exception as e: + print(e) raise #raise NineMLRuntimeError('component_functor() threw an exception') @@ -97,7 +97,7 @@ # Try and get the meta-data self.metadata = None - if cls.metadata_name in self.mod.__dict__.keys(): + if cls.metadata_name in list(self.mod.__dict__.keys()): self.metadata = self.mod.__dict__[cls.metadata_name] --- ./nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py (original) +++ ./nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py (refactored) @@ -10,7 +10,7 @@ @classmethod def test(cls, testable_component, build_dir): component = testable_component() - print ' -- Testing One and a half trips...' + print(' -- Testing One and a half trips...') if not component.is_flat(): component = flattening.flatten(component) @@ -20,23 +20,23 @@ xmlfile2 = build_dir + component.name + '2.xml' - print ' -- Saving Component To XML:', xmlfile1 + print(' -- Saving Component To XML:', xmlfile1) writers.XMLWriter.write( component, xmlfile1 ) - print ' -- Loading Component To XML.' + print(' -- Loading Component To XML.') reloaded_comp = readers.XMLReader.read(xmlfile1) - print ' -- Checking Components are identical' + print(' -- Checking Components are identical') validators.ComponentEqualityChecker.check_equal( component, reloaded_comp) - print ' -- Saving Reloaded Component to XML',xmlfile2 + print(' -- Saving Reloaded Component to XML',xmlfile2) writers.XMLWriter.write( reloaded_comp, xmlfile2 ) - print ' -- Checking the SHA1 Checksum of the two xml files:' + print(' -- Checking the SHA1 Checksum of the two xml files:') hash1 = file_sha1_hexdigest(xmlfile1) hash2 = file_sha1_hexdigest(xmlfile2) - print ' -->', hash1 - print ' -->', hash2 + print(' -->', hash1) + print(' -->', hash2) if hash1 != hash2: raise ValueError('XML files are different. This may not be an error but please report it to the developers') --- ./nineml/abstraction_layer/testing_utils/test_write_dot.py (original) +++ ./nineml/abstraction_layer/testing_utils/test_write_dot.py (refactored) @@ -5,9 +5,9 @@ @classmethod def test(cls, testable_component, build_dir): component = testable_component() - print ' -- Writing Component to .dot' + print(' -- Writing Component to .dot') dotfile = build_dir + component.name + '.dot' writers.DotWriter.write(component, dotfile) - print ' -- Building .dot -> pdf, svg, png' + print(' -- Building .dot -> pdf, svg, png') writers.DotWriter.build(dotfile, output_types=['pdf','svg','png']) --- ./nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py (original) +++ ./nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py (refactored) @@ -40,7 +40,7 @@RefactoringTool: No changes to ./nineml/abstraction_layer/testing_utils/record_value.py RefactoringTool: Refactored ./nineml/abstraction_layer/testing_utils/__init__.py RefactoringTool: Refactored ./nineml/abstraction_layer/readers/xml_reader.py RefactoringTool: Refactored ./nineml/abstraction_layer/readers/__init__.py RefactoringTool: Refactored ./nineml/abstraction_layer/flattening/flattening.py cells = sim.Population(1, celltype_cls, parameters) # Set Initial Values: - for state, state_initial_value in initial_values.iteritems(): + for state, state_initial_value in initial_values.items(): cells.initialize( state, state_initial_value ) --- ./nineml/abstraction_layer/testing_utils/__init__.py (original) +++ ./nineml/abstraction_layer/testing_utils/__init__.py (refactored) @@ -1,10 +1,10 @@ -from simulate_pynn_neuron import std_pynn_simulation -from record_value import RecordValue +from .simulate_pynn_neuron import std_pynn_simulation +from .record_value import RecordValue -from testable_component import TestableComponent +from .testable_component import TestableComponent -from test_xml_write_read_write import TestXMLWriteReadWrite -from test_write_dot import TestWriteDot +from .test_xml_write_read_write import TestXMLWriteReadWrite +from .test_write_dot import TestWriteDot --- ./nineml/abstraction_layer/readers/xml_reader.py (original) +++ ./nineml/abstraction_layer/readers/xml_reader.py (refactored) @@ -158,7 +158,7 @@ if checkOnlyBlock: elements = list(element.iterchildren(tag=nineml.al.etree.Element ) ) if len( elements ) != 1: - print elements + print(elements) assert False, 'Unexpected tags found' assert len( element.findall(nineml.al.NINEML+"MathML") ) == 0 --- ./nineml/abstraction_layer/readers/__init__.py (original) +++ ./nineml/abstraction_layer/readers/__init__.py (refactored) @@ -1,2 +1,2 @@ -from xml_reader import XMLReader +from .xml_reader import XMLReader --- ./nineml/abstraction_layer/flattening/flattening.py (original) +++ ./nineml/abstraction_layer/flattening/flattening.py (refactored) @@ -141,7 +141,7 @@ @classmethod def flatten_namespace_dict(cls, ns_dict): new_dict = {} - for k, v in ns_dict.iteritems(): + for k, v in ns_dict.items(): new_dict[ cls.flatten_namespace(k) ] = v return new_dict @@ -168,7 +168,7 @@ comp_ns = c.get_node_addr() if not comp_ns in ns_regimename: err = 'Looking for a regime in namespace: %s, but not found.' % str(comp_ns) - err += '\nNamespaces: %s' % ','.join([str(ns) for ns in ns_regimename.keys()]) + err += '\nNamespaces: %s' % ','.join([str(ns) for ns in list(ns_regimename.keys())]) err += '\nSpecified String: %s'% old_regime_string raise nineml.exceptions.NineMLRuntimeError(err) target_regime_name = ns_regimename[comp_ns] @@ -176,7 +176,7 @@ regime_map = dict( [ (r.name, r) for r in c.regimes] ) if not target_regime_name in regime_map: err = 'Namespace has no regime named: %s' - err += '\nRegimes: %s' % (str(regime_map.keys())) + err += '\nRegimes: %s' % (str(list(regime_map.keys()))) raise nineml.exceptions.NineMLRuntimeError(err) target_regime_tuple.append( regime_map[target_regime_name] ) @@ -236,7 +236,7 @@ name=self.componentname, aliases = flatten_first_level( [ m.aliases for m in self.all_components ] ), state_variables = flatten_first_level( [ m.state_variables for m in self.all_components ] ), - regimes = self.old_regime_tuple_to_new_regime_map.values(), + regimes = list(self.old_regime_tuple_to_new_regime_map.values()), analog_ports=flatten_first_level( [comp.analog_ports for comp in self.all_components] ), event_ports= flatten_first_level( [comp.event_ports for comp in self.all_components] ), parameters= flatten_first_level( [ m.parameters for m in self.all_components ] ) ) @@ -288,7 +288,7 @@ # Create New Events for the Regime-Map - for regimetuple, regime_new in self.old_regime_tuple_to_new_regime_map.iteritems(): + for regimetuple, regime_new in self.old_regRefactoringTool: Refactored ./nineml/abstraction_layer/flattening/__init__.py RefactoringTool: No changes to ./nineml/abstraction_layer/component_modifiers/component_modifier.py RefactoringTool: Refactored ./nineml/abstraction_layer/component_modifiers/__init__.py RefactoringTool: Refactored ./nineml/abstraction_layer/component/util.py RefactoringTool: No changes to ./nineml/abstraction_layer/component/syntacticsugar.py RefactoringTool: Refactored ./nineml/abstraction_layer/component/ports.py RefactoringTool: Refactored ./nineml/abstraction_layer/component/namespaceaddress.py RefactoringTool: No changes to ./nineml/abstraction_layer/component/interface.py RefactoringTool: Refactored ./nineml/abstraction_layer/component/expressions.py ime_tuple_to_new_regime_map.items(): for regime_index, regime in enumerate( regimetuple ): for oldtransition in regime.on_conditions: @@ -372,7 +372,7 @@ reduce_connections[dstport].append(srcport) # 2/ Substitute each reduce port in turn: - for dstport, srcport_list in reduce_connections.iteritems(): + for dstport, srcport_list in reduce_connections.items(): src_subs = [ s.name for s in srcport_list ] terms = [dstport.name] + src_subs reduce_expr = dstport.reduce_op.join(terms) --- ./nineml/abstraction_layer/flattening/__init__.py (original) +++ ./nineml/abstraction_layer/flattening/__init__.py (refactored) @@ -1,6 +1,6 @@ -from flattening import ComponentFlattener, flatten +from .flattening import ComponentFlattener, flatten --- ./nineml/abstraction_layer/component_modifiers/__init__.py (original) +++ ./nineml/abstraction_layer/component_modifiers/__init__.py (refactored) @@ -1,3 +1,3 @@ -from component_modifier import ComponentModifier +from .component_modifier import ComponentModifier --- ./nineml/abstraction_layer/component/util.py (original) +++ ./nineml/abstraction_layer/component/util.py (refactored) @@ -123,7 +123,7 @@ @classmethod def get_rhs_substituted(cls, expr_obj, namemap ): expr = expr_obj.rhs - for frm,to in namemap.iteritems(): + for frm,to in namemap.items(): expr = MathUtil.str_expr_replacement( frm, to, expr, func_ok=False) return expr --- ./nineml/abstraction_layer/component/ports.py (original) +++ ./nineml/abstraction_layer/component/ports.py (refactored) @@ -65,7 +65,7 @@ raise nineml.exceptions.NineMLRuntimeError(err) if mode == 'reduce': - if reduce_op not in Port._reduce_op_map.keys(): + if reduce_op not in list(Port._reduce_op_map.keys()): err = ("%s('%s')"+ "specified undefined reduce_op: '%s'") %\ (self.__class__.__name__, name, str(reduce_op)) raise nineml.exceptions.NineMLRuntimeError(err) --- ./nineml/abstraction_layer/component/namespaceaddress.py (original) +++ ./nineml/abstraction_layer/component/namespaceaddress.py (refactored) @@ -44,7 +44,7 @@ def __init__(self, loc): - if isinstance(loc, basestring): + if isinstance(loc, str): if '.' in loc: self.loctuple = tuple( loc.split('.') ) else: @@ -54,7 +54,7 @@ elif isinstance(loc, NamespaceAddress): self.loctuple = loc.loctuple else: - print loc, type(loc) + print(loc, type(loc)) assert False # Since we often store Namespace addresses in dictionaries: @@ -71,7 +71,7 @@ def __str__(self): - print self.loctuple + print(self.loctuple) return "" --- ./nineml/abstraction_layer/component/expressions.py (original) +++ ./nineml/abstraction_layer/component/expressions.py (refactored) @@ -5,9 +5,9 @@ #import math_namespace from nineml.exceptions import NineMLRuntimeError -import util - -import parse +from . import util + +from . import parse #from expr_parse import expr_parse import nineml @@ -427,7 +427,7 @@ def expr_to_obj(s, name = None): """ Construct nineml objects from expressions """ - from util import StrToExpr + from .util import StrToExpr #import re @@ -450,7 +450,7 @@ p_eqn = re.compile(r"(?P[a-zA-Z_]+[a-zA-Z_0-9]*(/?[a-zA-Z_]+[a-zA-Z_0-9]*)?)\s*(?P[+\-*/:]?=)\s*(?P.*)") m = p_eqn.match(s) if not m: - raise ValueError, "Not a valid nineml expression: %s" % s + raise ValueError("Not a valid nineml expression: %s" % s) # get lhs, op, rhs lhs, op, rhs = [m.group(x) for x in ['lhs', 'op', 'rhs']] @@ -461,7 +461,7 @@ m = p_ode_lhs.match(lhs) if m: if op!="=": - raise ValueError, "TimeDerRefactoringTool: No changes to ./nineml/abstraction_layer/component/events.py RefactoringTool: Refactored ./nineml/abstraction_layer/component/dynamics.py ivative lhs, but op not '=' in %s" % s + raise ValueError("TimeDerivative lhs, but op not '=' in %s" % s) dep_var = m.group(1) indep_var = m.group(2) @@ -476,6 +476,6 @@ return StateAssignment(lhs, rhs, name = name) # If we get here, what do we have? - raise ValueError, "Cannot map expr '%s' to a nineml Expression" % s - - + raise ValueError("Cannot map expr '%s' to a nineml Expression" % s) + + --- ./nineml/abstraction_layer/component/dynamics.py (original) +++ ./nineml/abstraction_layer/component/dynamics.py (refactored) @@ -2,10 +2,10 @@ from itertools import chain -from expressions import StateAssignment, TimeDerivative, Alias -from conditions import Condition -from events import OutputEvent -from util import StrToExpr, MathUtil +from .expressions import StateAssignment, TimeDerivative, Alias +from .conditions import Condition +from .events import OutputEvent +from .util import StrToExpr, MathUtil import nineml.utility from nineml.exceptions import NineMLRuntimeError @@ -44,15 +44,15 @@ """ if target_regime_name: - assert isinstance(target_regime_name, basestring) + assert isinstance(target_regime_name, str) # Load state-assignment objects as strings or StateAssignment objects from nineml.utility import filter_discrete_types state_assignments = state_assignments or [] - sa_types = (basestring, StateAssignment ) + sa_types = (str, StateAssignment ) sa_type_dict = filter_discrete_types( state_assignments, sa_types ) - sa_from_str = [StrToExpr.state_assignment(o) for o in sa_type_dict[basestring]] + sa_from_str = [StrToExpr.state_assignment(o) for o in sa_type_dict[str]] self._state_assignments = sa_type_dict[StateAssignment] + sa_from_str @@ -118,7 +118,7 @@ """DO NOT USE: Internal function. Use `target_regime.name` instead. """ if self._target_regime_name: - assert isinstance( self._target_regime_name, basestring) + assert isinstance( self._target_regime_name, str) return self._target_regime_name @property @@ -223,7 +223,7 @@ from nineml.abstraction_layer.visitors import ClonerVisitor if isinstance( trigger, Condition): self._trigger = ClonerVisitor().visit( trigger ) - elif isinstance( trigger, basestring): + elif isinstance( trigger, str): self._trigger = Condition( rhs = trigger ) else: assert False @@ -319,9 +319,9 @@ time_derivatives = nineml.utility.normalise_parameter_as_list(time_derivatives) #time_derivatives.extend( args ) - td_types = (basestring, TimeDerivative ) + td_types = (str, TimeDerivative ) td_type_dict = nineml.utility.filter_discrete_types(time_derivatives, td_types) - td_from_str = [StrToExpr.time_derivative(o) for o in td_type_dict[basestring]] + td_from_str = [StrToExpr.time_derivative(o) for o in td_type_dict[str]] self._time_derivatives = td_type_dict[TimeDerivative] + td_from_str # Check for double definitions: @@ -459,14 +459,14 @@ # Forwarding Function: def On( trigger, do=None, to=None ): - if isinstance(do, (OutputEvent, basestring)): + if isinstance(do, (OutputEvent, str)): do = [do] elif do == None: do = [] else: pass - if isinstance( trigger, basestring): + if isinstance( trigger, str): if MathUtil.is_single_symbol(trigger): return DoOnEvent(input_event=trigger, do=do, to=to) else: @@ -486,17 +486,17 @@ def do_to_assignments_and_events(doList): if not doList: return [], [] # 'doList' is a list of strings, OutputEvents, and StateAssignments. - do_type_list = (OutputEvent, basestring, StateAssignment) + do_type_list = (OutputEvent, str, StateAssignment) do_types = nineml.utility.filter_discrete_types(doList, do_type_list) #ConRefactoringTool: Refactored ./nineml/abstraction_layer/component/conditions.py RefactoringTool: Refactored ./nineml/abstraction_layer/component/componentqueryer.py RefactoringTool: Refactored ./nineml/abstraction_layer/component/component.py vert strings to StateAssignments: - sa_from_strs = [StrToExpr.state_assignment(s) for s in do_types[basestring]] + sa_from_strs = [StrToExpr.state_assignment(s) for s in do_types[str]] return do_types[StateAssignment]+sa_from_strs, do_types[OutputEvent] def DoOnEvent(input_event, do=None, to=None): - assert isinstance( input_event, basestring) + assert isinstance( input_event, str) assignments, output_events = do_to_assignments_and_events( do ) return OnEvent( src_port_name=input_event, @@ -538,14 +538,14 @@ # Load the aliases as objects or strings: from nineml.utility import filter_discrete_types - alias_td = filter_discrete_types( aliases, (basestring, Alias ) ) - aliases_from_strs = [StrToExpr.alias(o) for o in alias_td[basestring]] + alias_td = filter_discrete_types( aliases, (str, Alias ) ) + aliases_from_strs = [StrToExpr.alias(o) for o in alias_td[str]] aliases = alias_td[Alias] + aliases_from_strs # Load the state variables as objects or strings: - sv_types = (basestring, StateVariable) + sv_types = (str, StateVariable) sv_td = filter_discrete_types( state_variables, sv_types) - sv_from_strings = [ StateVariable(o) for o in sv_td[basestring] ] + sv_from_strings = [ StateVariable(o) for o in sv_td[str] ] state_variables = sv_td[StateVariable] + sv_from_strings --- ./nineml/abstraction_layer/component/conditions.py (original) +++ ./nineml/abstraction_layer/component/conditions.py (refactored) @@ -1,7 +1,7 @@ import nineml -import expressions -from expressions import Expression +from . import expressions +from .expressions import Expression class Condition(expressions.Expression): @@ -14,7 +14,7 @@ def _parse_rhs(self, rhs): - import parse + from . import parse return parse.cond(rhs) @@ -47,7 +47,7 @@ - import util + from . import util rhs = self.rhs rhs = rhs.replace('!',' not ') @@ -59,7 +59,7 @@ 'false':'False' } - for frm,to in name_map.iteritems(): + for frm,to in name_map.items(): rhs = util.MathUtil.str_expr_replacement(frm, to, rhs) lmda_str = "lambda %s: %s" % (','.join(self.rhs_names), rhs) @@ -83,6 +83,6 @@ elif isinstance(cond_str, str): return Condition(cond_str.strip()) - raise ValueError, "Condition: expected None, str, or Condition object" + raise ValueError("Condition: expected None, str, or Condition object") --- ./nineml/abstraction_layer/component/componentqueryer.py (original) +++ ./nineml/abstraction_layer/component/componentqueryer.py (refactored) @@ -33,7 +33,7 @@ # Find basic properties by name def regime(self, name=None,): """Find a regime in the component by name""" - assert isinstance(name, basestring) + assert isinstance(name, str) return filter_expect_single( self.component.regimes, lambda r:r.name==name ) @@ -116,7 +116,7 @@ def recurse_all_components(self): """Returns an iterator over this component and all subcomponents""" yield self.component - for subcomponent in self.component.subnodes.values(): + for subcomponent in list(self.component.subnodes.values()): for subcomp in subcomponent.query.recurse_all_components: yield subcomp --- ./nineml/abstraction_layer/component/component.py (original) +++ ./nineml/abstraction_layer/component/component.py (refactored) @@ -4,15 +4,15 @@ """ from nineml.exceptions import NineMLRuntimeError -from namespaceaddress import NamespaceAddress -import componentqueryer +from .namespaceaddress import NamespaceAddress +from . import componentqueryer import nineml.utility -import dynamics as dyn +from . import dynamics as dyn import itertools -from interface import Parameter -from dynamics import StateVariable -from ports iRefactoringTool: Refactored ./nineml/abstraction_layer/component/__init__.py RefactoringTool: Refactored ./nineml/abstraction_layer/component/parse/expr_parse.py mport EventPort +from .interface import Parameter +from .dynamics import StateVariable +from .ports import EventPort from nineml.utility import check_list_contain_same_items @@ -161,7 +161,7 @@ self._portconnections = [] # Add the parameters using class methods: - for namespace, subnode in subnodes.iteritems(): + for namespace, subnode in subnodes.items(): self.insert_subnode(subnode=subnode, namespace=namespace) for src, sink in portconnections: @@ -206,7 +206,7 @@ local_namespace_ref = namespace_addr.loctuple[0] if not local_namespace_ref in self.subnodes: err = "Attempted to lookup node: %s\n" % local_namespace_ref - err +="Doesn't exist in this namespace: %s" % self.subnodes.keys() + err +="Doesn't exist in this namespace: %s" % list(self.subnodes.keys()) raise NineMLRuntimeError(err) subnode = self.subnodes[local_namespace_ref] @@ -231,7 +231,7 @@ This method will clone the subnode. """ - if not isinstance( namespace, basestring): + if not isinstance( namespace, str): err = 'Invalid namespace: %s' % type(subnode) raise NineMLRuntimeError(err) @@ -444,9 +444,9 @@ # Turn any strings in the parameter list into Parameters: from nineml.utility import filter_discrete_types if parameters is not None: - param_types = (basestring, Parameter) + param_types = (str, Parameter) param_td = filter_discrete_types(parameters, param_types) - params_from_strings = [Parameter(s) for s in param_td[basestring]] + params_from_strings = [Parameter(s) for s in param_td[str]] parameters = param_td[Parameter] + params_from_strings --- ./nineml/abstraction_layer/component/__init__.py (original) +++ ./nineml/abstraction_layer/component/__init__.py (refactored) @@ -5,28 +5,28 @@ """ -from dynamics import Regime, Transition, On, OnEvent, OnCondition -from dynamics import Dynamics, StateVariable -from interface import Parameter -from expressions import RegimeElement, Expression, Equation -from expressions import ExpressionWithLHS, ExpressionWithSimpleLHS, Alias -from expressions import StateAssignment, TimeDerivative -from conditions import Condition -from ports import Port, AnalogPort, EventPort -from ports import ReducePort, RecvPort, SendPort, RecvEventPort, SendEventPort +from .dynamics import Regime, Transition, On, OnEvent, OnCondition +from .dynamics import Dynamics, StateVariable +from .interface import Parameter +from .expressions import RegimeElement, Expression, Equation +from .expressions import ExpressionWithLHS, ExpressionWithSimpleLHS, Alias +from .expressions import StateAssignment, TimeDerivative +from .conditions import Condition +from .ports import Port, AnalogPort, EventPort +from .ports import ReducePort, RecvPort, SendPort, RecvEventPort, SendEventPort -from events import OutputEvent -from namespaceaddress import NamespaceAddress -from component import ComponentClass -from component import ComponentClassMixinFlatStructure -from component import ComponentClassMixinNamespaceStructure -from componentqueryer import ComponentQueryer -from util import parse, StrToExpr, MathUtil +from .events import OutputEvent +from .namespaceaddress import NamespaceAddress +from .component import ComponentClass +from .component import ComponentClassMixinFlatStructure +from .component import ComponentClassMixinNamespaceStructure +from .componentqueryer import ComponentQueryer +from .util import parse, StrToExpr, MathUtil -from parse import NineMLMathParseError +from .parse import NineMLMathParseError -from syntacticsugar import SpikeOutputEvent +from .syntacticsugar import SpikeOutputEvent from nineml import __version__ --- ./nineml/abstraction_layer/component/parse/expr_parse.py (original) +++ ./nineml/abstraction_layer/component/parse/expr_parse.py (refactored) @@ -23,11 +23,11 @@ def call_expr_func(expr_funRefactoringTool: Refactored ./nineml/abstraction_layer/component/parse/cond_parse.py c, ns): args = [] - for var in expr_func.func_code.co_varnames: + for var in expr_func.__code__.co_varnames: try: args.append(ns[var]) except KeyError: - raise KeyError, "call_expr_func: namespace missing variable '%s'" % var + raise KeyError("call_expr_func: namespace missing variable '%s'" % var) return expr_func(*args) @@ -66,8 +66,8 @@ self.funcs = [] try: yacc.parse(expr) - except NineMLMathParseError, e: - raise NineMLMathParseError, str(e)+" Expression was: '%s'" % expr + except NineMLMathParseError as e: + raise NineMLMathParseError(str(e)+" Expression was: '%s'" % expr) # remove names from the math_namespace self.names = set(self.names) @@ -106,7 +106,7 @@ t.value = float(t.value) except ValueError: from nineml.abstraction_layer.component.parse import NineMLMathParseError - raise NineMLMathParseError, "Invalid number %s" % t.value + raise NineMLMathParseError("Invalid number %s" % t.value) return t t_ignore = " \t" @@ -114,7 +114,7 @@ def t_error(self, t): from nineml.abstraction_layer.component.parse import NineMLMathParseError - raise NineMLMathParseError, "Illegal character '%s' in '%s'" % (t.value[0],t) + raise NineMLMathParseError("Illegal character '%s' in '%s'" % (t.value[0],t)) precedence = ( ('left','PLUS','MINUS'), @@ -170,9 +170,9 @@ def p_error(self, p): from nineml.abstraction_layer.component.parse import NineMLMathParseError if p: - raise NineMLMathParseError, "Syntax error at '%s'" % p.value + raise NineMLMathParseError("Syntax error at '%s'" % p.value) else: - raise NineMLMathParseError, "Syntax error at EOF, probably unmatched parenthesis." + raise NineMLMathParseError("Syntax error at EOF, probably unmatched parenthesis.") def expr_parse(rhs): @@ -185,4 +185,4 @@ if __name__ == '__main__': calc = CalcExpr() p = calc.parse("1 / (( 1 + mg_conc * eta * exp ( -1 * gamma*V))") - print p + print(p) --- ./nineml/abstraction_layer/component/parse/cond_parse.py (original) +++ ./nineml/abstraction_layer/component/parse/cond_parse.py (refactored) @@ -18,7 +18,7 @@ import ply.lex as lex import ply.yacc as yacc import os -from expr_parse import call_expr_func +from .expr_parse import call_expr_func from nineml.utility import LocationMgr from . import NineMLMathParseError @@ -61,8 +61,8 @@ self.funcs = [] try: yacc.parse(expr) - except NineMLMathParseError, e: - raise NineMLMathParseError, str(e)+" Expression was: '%s'" % expr + except NineMLMathParseError as e: + raise NineMLMathParseError(str(e)+" Expression was: '%s'" % expr) #return set(self.names), set(self.funcs) @@ -112,15 +112,14 @@ try: t.value = float(t.value) except ValueError: - raise NineMLMathParseError, "Invalid number %s" % t.value + raise NineMLMathParseError("Invalid number %s" % t.value) return t t_ignore = " \t" def t_error(self, t): - raise NineMLMathParseError, \ - "Illegal character '%s' in '%s'" % (t.value[0],t) + raise NineMLMathParseError("Illegal character '%s' in '%s'" % (t.value[0],t)) precedence = ( ('left','NAME'), @@ -199,17 +198,15 @@ from nineml.maths import is_builtin_math_function if not is_builtin_math_function(func_name): #if func_name not in nineml.maths.namespace: - raise NineMLMathParseError, "Undefined function '%s'" % func_name + raise NineMLMathParseError("Undefined function '%s'" % func_name) self.funcs.append(func_name) def p_error(self, p): if p: - raise NineMLMathParseError, \ - "Syntax error at '%s'" % p.value + raRefactoringTool: Refactored ./nineml/abstraction_layer/component/parse/__init__.py RefactoringTool: Refactored ./doc/python_nineml_api/source/conf.py RefactoringTool: Files that were modified: RefactoringTool: ./setup.py RefactoringTool: ./distribute_setup.py RefactoringTool: ./testing_scripts/create_skeleton_testing_hierachy.py RefactoringTool: ./test/unit/nineml_test/utility/INIT_test.py RefactoringTool: ./test/unit/nineml_test/exceptions/exceptions_test.py RefactoringTool: ./test/unit/nineml_test/abstraction_layer/util_test.py RefactoringTool: ./test/unit/nineml_test/abstraction_layer/visitors/cloner_test.py 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./nineml/examples/AL/components_done/destexhe_ampa.py RefactoringTool: ./nineml/examples/AL/components_done/coba_synapse.py RefactoringTool: ./nineml/examples/AL/components_done/aeIF.py RefactoringTool: ./nineml/abstraction_layer/xmlns.py RefactoringTool: ./nineml/abstraction_layer/util.py RefactoringTool: ./nineml/abstraction_layer/__init__.py RefactoringTool: ./nineml/abstraction_layer/writers/xml_writer.py RefactoringTool: ./nineml/abstraction_layer/writers/text_writer.py RefactoringTool: ./nineml/abstraction_layer/writers/mod_file_writer.py RefactoringTool: ./nineml/abstraction_layer/writers/dot_writer.py RefactoringTool: ./nineml/abstraction_layer/writers/__init__.py RefactoringTool: ./nineml/abstraction_layer/visitors/cloner.py RefactoringTool: ./nineml/abstraction_layer/visitors/base.py RefactoringTool: ./nineml/abstraction_layer/visitors/__init__.py RefactoringTool: ./nineml/abstraction_layer/validators/equality_checker.py RefactoringTool: ./nineml/abstraction_layer/validators/cv_regimenames.py RefactoringTool: ./nineml/abstraction_layer/validators/cv_ports.py RefactoringTool: ./nineml/abstraction_layer/validators/cv_namingconflicts.py RefactoringTool: ./nineml/abstraction_layer/validators/cv_general.py RefactoringTool: ./nineml/abstraction_layer/validators/component_validator.py RefactoringTool: ./nineml/abstraction_layer/validators/base.py RefactoringTool: ./nineml/abstraction_layer/validators/__init__.py RefactoringTool: ./nineml/abstraction_layer/testing_utils/testable_component.py RefactoringTool: ./nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py RefactoringTool: ./nineml/abstraction_layer/testing_utils/test_write_dot.py RefactoringTool: ./nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py RefactoringTool: ./nineml/abstraction_layer/testing_utils/record_value.py RefactoringTool: ./nineml/abstraction_layer/testing_utils/__init__.py RefactoringTool: ./nineml/abstraction_layer/readers/xml_reader.py RefactoringTool: ./nineml/abstraction_layer/readers/__init__.py RefactoringTool: ./nineml/abstraction_layer/flattening/flattening.py RefactoringTool: ./nineml/abstraction_layer/flattening/__init__.py RefactoringTool: ./nineml/abstraction_layer/component_modifiers/component_modifier.py RefactoringTool: ./nineml/abstraction_layer/component_modifiers/__init__.py RefactoringTool: ./nineml/abstraction_layer/component/util.py RefactoringTool: ./nineml/abstraction_layer/component/syntacticsugar.py RefactoringTool: ./nineml/abstraction_layer/component/ports.py RefactoringTool: ./nineml/abstraction_layer/component/namespaceaddress.py RefactoringTool: ./nineml/abstraction_layer/component/interface.py RefactoringTool: ./nineml/abstraction_layer/component/expressions.py RefactoringTool: ./nineml/abstraction_layer/component/events.py RefactoringTool: ./nineml/abstraction_layer/component/dynamics.py RefactoringTool: ./nineml/abstraction_layer/component/conditions.py RefactoringTool: ./nineml/abstraction_layer/component/componentqueryer.py RefactoringTool: ./nineml/abstraction_layer/component/component.py RefactoringTool: ./nineml/abstraction_layer/component/__init__.py RefactoringTool: ./nineml/abstraction_layer/component/parse/expr_parse.py RefactoringTool: ./nineml/abstraction_layer/component/parse/cond_parse.py RefactoringTool: ./nineml/abstraction_layer/component/parse/__init__.py RefactoringTool: ./doc/python_nineml_api/source/conf.py ise NineMLMathParseError("Syntax error at '%s'" % p.value) else: - raise NineMLMathParseError, \ - "Syntax error at EOF, probably unmatched parenthesis." + raise NineMLMathParseError("Syntax error at EOF, probably unmatched parenthesis.") def cond_parse(conditional): --- ./nineml/abstraction_layer/component/parse/__init__.py (original) +++ ./nineml/abstraction_layer/component/parse/__init__.py (refactored) @@ -6,6 +6,6 @@ -from expr_parse import expr_parse as expr -from cond_parse import cond_parse as cond +from .expr_parse import expr_parse as expr +from .cond_parse import cond_parse as cond #import cond_parse as cond --- ./doc/python_nineml_api/source/conf.py (original) +++ ./doc/python_nineml_api/source/conf.py (refactored) @@ -43,8 +43,8 @@ master_doc = 'index' # General information about the project. -project = u'NineML Python API' -copyright = u'2011, Mike Hull, Eilif Muller, Andrew Davison' +project = 'NineML Python API' +copyright = '2011, Mike Hull, Eilif Muller, Andrew Davison' # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the @@ -181,8 +181,8 @@ # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, author, documentclass [howto/manual]). latex_documents = [ - ('index', 'NineMLPythonAPI.tex', u'NineML Python API Documentation', - u'Mike Hull, Eilif Muller, Andrew Davison', 'manual'), + ('index', 'NineMLPythonAPI.tex', 'NineML Python API Documentation', + 'Mike Hull, Eilif Muller, Andrew Davison', 'manual'), ] # The name of an image file (relative to this directory) to place at the top of @@ -214,8 +214,8 @@ # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ - ('index', 'ninemlabstractionlayerapi', u'NineML AbstractionLayer API Documentation', - [u'Mike Hull, Eilif Muller, Andrew Davison'], 1) + ('index', 'ninemlabstractionlayerapi', 'NineML AbstractionLayer API Documentation', + ['Mike Hull, Eilif Muller, Andrew Davison'], 1) ] # If true, show URL addresses after external links. @@ -228,7 +228,7 @@ # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ - ('index', 'NineMLPythonAPI', u'NineML Python API Documentation', u'Mike Hull, Eilif Muller, Andrew Davison', + ('index', 'NineMLPythonAPI', 'NineML Python API Documentation', 'Mike Hull, Eilif Muller, Andrew Davison', 'NineMLPythonAPI', 'One line description of project.', 'Miscellaneous'), ] @@ -245,10 +245,10 @@ # -- Options for Epub output --------------------------------------------------- # Bibliographic Dublin Core info. -epub_title = u'NineML Python API' -epub_author = u'Mike Hull, Eilif Muller, Andrew Davison' -epub_publisher = u'Mike Hull, Eilif Muller, Andrew Davison' -epub_copyright = u'2011, Mike Hull, Eilif Muller, Andrew Davison' +epub_title = 'NineML Python API' +epub_author = 'Mike Hull, Eilif Muller, Andrew Davison' +epub_publisher = 'Mike Hull, Eilif Muller, Andrew Davison' +epub_copyright = '2011, Mike Hull, Eilif Muller, Andrew Davison' # The language of the text. It defaults to the language option # or en if the language is not set. + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.62435 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python-module-9ML-0.1.0 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export FFLAGS + /usr/bin/python2.7 setup.py build --debug running build running build_py creating build creating build/lib creating build/lib/nineml copying nineml/user_layer.py -> build/lib/nineml copying nineml/__init__.py -> build/lib/nineml creating build/lib/nineml/abstraction_layer copying nineml/abstraction_layer/xmlns.py -> build/lib/nineml/abstraction_layer copying nineml/abstraction_layer/util.py -> build/lib/nineml/abstraction_layer copying nineml/abstraction_layer/__init__.py -> build/lib/nineml/abstraction_layer creating build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/util.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/syntacticsugar.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/ports.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/namespaceaddress.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/interface.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/expressions.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/events.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/dynamics.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/conditions.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/componentqueryer.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/component.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/__init__.py -> build/lib/nineml/abstraction_layer/component creating build/lib/nineml/abstraction_layer/component/parse copying nineml/abstraction_layer/component/parse/expr_parse.py -> build/lib/nineml/abstraction_layer/component/parse copying nineml/abstraction_layer/component/parse/cond_parse.py -> build/lib/nineml/abstraction_layer/component/parse copying nineml/abstraction_layer/component/parse/__init__.py -> build/lib/nineml/abstraction_layer/component/parse creating build/lib/nineml/abstraction_layer/component_modifiers copying nineml/abstraction_layer/component_modifiers/component_modifier.py -> build/lib/nineml/abstraction_layer/component_modifiers copying nineml/abstraction_layer/component_modifiers/__init__.py -> build/lib/nineml/abstraction_layer/component_modifiers creating build/lib/nineml/abstraction_layer/flattening copying nineml/abstraction_layer/flattening/flattening.py -> build/lib/nineml/abstraction_layer/flattening copying nineml/abstraction_layer/flattening/__init__.py -> build/lib/nineml/abstraction_layer/flattening creating build/lib/nineml/abstraction_layer/readers copying nineml/abstraction_layer/readers/xml_reader.py -> build/lib/nineml/abstraction_layer/readers copying nineml/abstraction_layer/readers/__init__.py -> build/lib/nineml/abstraction_layer/readers creating build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/testable_component.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/test_write_dot.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/record_value.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/__init__.py -> build/lib/nineml/abstraction_layer/testing_utils creating build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/equality_checker.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_types.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_regimenames.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_ports.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_namingconflicts.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_general.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/component_validator.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/base.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/__init__.py -> build/lib/nineml/abstraction_layer/validators creating build/lib/nineml/abstraction_layer/visitors copying nineml/abstraction_layer/visitors/cloner.py -> build/lib/nineml/abstraction_layer/visitors copying nineml/abstraction_layer/visitors/base.py -> build/lib/nineml/abstraction_layer/visitors copying nineml/abstraction_layer/visitors/__init__.py -> build/lib/nineml/abstraction_layer/visitors creating build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/xml_writer.py -> build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/text_writer.py -> build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/mod_file_writer.py -> build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/dot_writer.py -> build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/__init__.py -> build/lib/nineml/abstraction_layer/writers creating build/lib/nineml/exceptions copying nineml/exceptions/exceptions.py -> build/lib/nineml/exceptions copying nineml/exceptions/__init__.py -> build/lib/nineml/exceptions creating build/lib/nineml/maths copying nineml/maths/__init__.py -> build/lib/nineml/maths creating build/lib/nineml/utility copying nineml/utility/__init__.py -> build/lib/nineml/utility creating build/lib/nineml/examples creating build/lib/nineml/examples/AL creating build/lib/nineml/examples/AL/demos copying nineml/examples/AL/demos/demo2_poisson_spike_gen.py -> build/lib/nineml/examples/AL/demos copying nineml/examples/AL/demos/demo1b_load_save_izekevich.py -> build/lib/nineml/examples/AL/demos copying nineml/examples/AL/demos/demo1a_load_save_coba1.py -> build/lib/nineml/examples/AL/demos creating build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/simple_current_clamp.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/nmda.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/morris_lecar.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/leaky_iaf.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/izhikevich2.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/izhikevich.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/if_cond_exp.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/iaf_sfa_relref.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/iaf.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hierachical_iaf_nmda.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hierachical_iaf_3coba.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hierachical_iaf_2coba.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hierachical_iaf_1coba.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hh.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/destexhe_ampa.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/coba_synapse.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/aeIF.py -> build/lib/nineml/examples/AL/components_done + pushd ../python3 ~/RPM/BUILD/python3 ~/RPM/BUILD/python-module-9ML-0.1.0 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export FFLAGS + /usr/bin/python3 setup.py build --debug running build running build_py creating build creating build/lib creating build/lib/nineml copying nineml/user_layer.py -> build/lib/nineml copying nineml/__init__.py -> build/lib/nineml creating build/lib/nineml/abstraction_layer copying nineml/abstraction_layer/xmlns.py -> build/lib/nineml/abstraction_layer copying nineml/abstraction_layer/util.py -> build/lib/nineml/abstraction_layer copying nineml/abstraction_layer/__init__.py -> build/lib/nineml/abstraction_layer creating build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/util.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/syntacticsugar.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/ports.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/namespaceaddress.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/interface.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/expressions.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/events.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/dynamics.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/conditions.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/componentqueryer.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/component.py -> build/lib/nineml/abstraction_layer/component copying nineml/abstraction_layer/component/__init__.py -> build/lib/nineml/abstraction_layer/component creating build/lib/nineml/abstraction_layer/component/parse copying nineml/abstraction_layer/component/parse/expr_parse.py -> build/lib/nineml/abstraction_layer/component/parse copying nineml/abstraction_layer/component/parse/cond_parse.py -> build/lib/nineml/abstraction_layer/component/parse copying nineml/abstraction_layer/component/parse/__init__.py -> build/lib/nineml/abstraction_layer/component/parse creating build/lib/nineml/abstraction_layer/component_modifiers copying nineml/abstraction_layer/component_modifiers/component_modifier.py -> build/lib/nineml/abstraction_layer/component_modifiers copying nineml/abstraction_layer/component_modifiers/__init__.py -> build/lib/nineml/abstraction_layer/component_modifiers creating build/lib/nineml/abstraction_layer/flattening copying nineml/abstraction_layer/flattening/flattening.py -> build/lib/nineml/abstraction_layer/flattening copying nineml/abstraction_layer/flattening/__init__.py -> build/lib/nineml/abstraction_layer/flattening creating build/lib/nineml/abstraction_layer/readers copying nineml/abstraction_layer/readers/xml_reader.py -> build/lib/nineml/abstraction_layer/readers copying nineml/abstraction_layer/readers/__init__.py -> build/lib/nineml/abstraction_layer/readers creating build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/testable_component.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/test_write_dot.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/record_value.py -> build/lib/nineml/abstraction_layer/testing_utils copying nineml/abstraction_layer/testing_utils/__init__.py -> build/lib/nineml/abstraction_layer/testing_utils creating build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/equality_checker.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_types.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_regimenames.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_ports.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_namingconflicts.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/cv_general.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/component_validator.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/base.py -> build/lib/nineml/abstraction_layer/validators copying nineml/abstraction_layer/validators/__init__.py -> build/lib/nineml/abstraction_layer/validators creating build/lib/nineml/abstraction_layer/visitors copying nineml/abstraction_layer/visitors/cloner.py -> build/lib/nineml/abstraction_layer/visitors copying nineml/abstraction_layer/visitors/base.py -> build/lib/nineml/abstraction_layer/visitors copying nineml/abstraction_layer/visitors/__init__.py -> build/lib/nineml/abstraction_layer/visitors creating build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/xml_writer.py -> build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/text_writer.py -> build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/mod_file_writer.py -> build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/dot_writer.py -> build/lib/nineml/abstraction_layer/writers copying nineml/abstraction_layer/writers/__init__.py -> build/lib/nineml/abstraction_layer/writers creating build/lib/nineml/exceptions copying nineml/exceptions/exceptions.py -> build/lib/nineml/exceptions copying nineml/exceptions/__init__.py -> build/lib/nineml/exceptions creating build/lib/nineml/maths copying nineml/maths/__init__.py -> build/lib/nineml/maths creating build/lib/nineml/utility copying nineml/utility/__init__.py -> build/lib/nineml/utility creating build/lib/nineml/examples creating build/lib/nineml/examples/AL creating build/lib/nineml/examples/AL/demos copying nineml/examples/AL/demos/demo2_poisson_spike_gen.py -> build/lib/nineml/examples/AL/demos copying nineml/examples/AL/demos/demo1b_load_save_izekevich.py -> build/lib/nineml/examples/AL/demos copying nineml/examples/AL/demos/demo1a_load_save_coba1.py -> build/lib/nineml/examples/AL/demos creating build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/simple_current_clamp.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/nmda.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/morris_lecar.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/leaky_iaf.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/izhikevich2.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/izhikevich.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/if_cond_exp.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/iaf_sfa_relref.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/iaf.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hierachical_iaf_nmda.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hierachical_iaf_3coba.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hierachical_iaf_2coba.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hierachical_iaf_1coba.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/hh.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/destexhe_ampa.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/coba_synapse.py -> build/lib/nineml/examples/AL/components_done copying nineml/examples/AL/components_done/aeIF.py -> build/lib/nineml/examples/AL/components_done + popd ~/RPM/BUILD/python-module-9ML-0.1.0 + pushd doc/python_nineml_api ~/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api ~/RPM/BUILD/python-module-9ML-0.1.0 + make pickle make: Entering directory '/usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api' sphinx-build -b pickle -d build/doctrees source build/pickle Running Sphinx v1.6.5 making output directory... Generating grammar tables from /usr/lib/python2.7/site-packages/sphinx/pycode/Grammar-py2.txt WARNING: sphinx.ext.pngmath has been deprecated. Please use sphinx.ext.imgmath instead. Initializing Spelling Checker loading pickled environment... not yet created [autosummary] generating autosummary for: index.rst, nineml_al_implementation_and_xml.rst, python_nineml.rst, src_rst/developers/al/developer.rst, src_rst/developers/al/visitors.rst, src_rst/developers/developer.rst, src_rst/developers/utility/developer.rst, src_rst/examples/examples_al_python.rst, src_rst/overview/nineml_overview.rst, src_rst/reference/component.rst, ..., src_rst/reference/validators.rst, src_rst/reference/visitors.rst, src_rst/reference/writers.rst, src_rst/tutorials/al/al.rst, src_rst/tutorials/al/class_overview.rst, src_rst/tutorials/al/hierarchical_components.rst, src_rst/tutorials/al/importing_exporting.rst, src_rst/tutorials/al/interfacing_pynn.rst, src_rst/tutorials/installation/installation.rst, xml_spec.rst WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Alias': no module named nineml.abstraction_layer.component.Alias WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.AnalogPort': no module named nineml.abstraction_layer.component.AnalogPort WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.ComponentClass': no module named nineml.abstraction_layer.component.ComponentClass WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.ComponentClassMixinFlatStructure': no module named nineml.abstraction_layer.component.ComponentClassMixinFlatStructure WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.ComponentClassMixinNamespaceStructure': no module named nineml.abstraction_layer.component.ComponentClassMixinNamespaceStructure WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.ComponentQueryer': no module named nineml.abstraction_layer.component.ComponentQueryer WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Condition': no module named nineml.abstraction_layer.component.Condition WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Dynamics': no module named nineml.abstraction_layer.component.Dynamics WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Equation': no module named nineml.abstraction_layer.component.Equation WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.EventPort': no module named nineml.abstraction_layer.component.EventPort WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Expression': no module named nineml.abstraction_layer.component.Expression WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.ExpressionWithLHS': no module named nineml.abstraction_layer.component.ExpressionWithLHS WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.ExpressionWithSimpleLHS': no module named nineml.abstraction_layer.component.ExpressionWithSimpleLHS WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.NamespaceAddress': no module named nineml.abstraction_layer.component.NamespaceAddress WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.NineMLMathParseError': no module named nineml.abstraction_layer.component.NineMLMathParseError WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.OnCondition': no module named nineml.abstraction_layer.component.OnCondition WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.OnEvent': no module named nineml.abstraction_layer.component.OnEvent WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.OutputEvent': no module named nineml.abstraction_layer.component.OutputEvent WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Parameter': no module named nineml.abstraction_layer.component.Parameter WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Port': no module named nineml.abstraction_layer.component.Port WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Regime': no module named nineml.abstraction_layer.component.Regime WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.RegimeElement': no module named nineml.abstraction_layer.component.RegimeElement WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.StateAssignment': no module named nineml.abstraction_layer.component.StateAssignment WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.StateVariable': no module named nineml.abstraction_layer.component.StateVariable WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.TimeDerivative': no module named nineml.abstraction_layer.component.TimeDerivative WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Transition': no module named nineml.abstraction_layer.component.Transition WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component_modifiers.ComponentModifier': no module named nineml.abstraction_layer.component_modifiers.ComponentModifier WARNING: [autosummary] failed to import u'nineml.abstraction_layer.readers.XMLReader': no module named nineml.abstraction_layer.readers.XMLReader WARNING: [autosummary] failed to import u'nineml.abstraction_layer.writers.DotWriter': no module named nineml.abstraction_layer.writers.DotWriter WARNING: [autosummary] failed to import u'nineml.abstraction_layer.writers.TextWriter': no module named nineml.abstraction_layer.writers.TextWriter WARNING: [autosummary] failed to import u'nineml.abstraction_layer.writers.XMLWriter': no module named nineml.abstraction_layer.writers.XMLWriter WARNING: [autosummary] failed to import u'nineml.utility.LocationMgr': no module named nineml.utility.LocationMgr WARNING: [autosummary] failed to import u'nineml.utility.assert_no_duplicates': no module named nineml.utility.assert_no_duplicates WARNING: [autosummary] failed to import u'nineml.utility.expect_single': no module named nineml.utility.expect_single WARNING: [autosummary] failed to import u'nineml.utility.filter_by_type': no module named nineml.utility.filter_by_type WARNING: [autosummary] failed to import u'nineml.utility.filter_discrete_types': no module named nineml.utility.filter_discrete_types WARNING: [autosummary] failed to import u'nineml.utility.filter_expect_single': no module named nineml.utility.filter_expect_single WARNING: [autosummary] failed to import u'nineml.utility.flatten_first_level': no module named nineml.utility.flatten_first_level WARNING: [autosummary] failed to import u'nineml.utility.invert_dictionary': no module named nineml.utility.invert_dictionary WARNING: [autosummary] failed to import u'nineml.utility.safe_dictionary_merge': no module named nineml.utility.safe_dictionary_merge building [mo]: targets for 0 po files that are out of date building [pickle]: targets for 24 source files that are out of date updating environment: 24 added, 0 changed, 0 removed reading sources... 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[100%] xml_spec /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:101: WARNING: Unknown directive type "comment". .. comment:: There is more about the NineML design and specification :doc:`here` /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:89: WARNING: image file not readable: _static/images/build/AL_UL_Overview.png /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/nineml_al_implementation_and_xml.rst:66: WARNING: Unexpected indentation. /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/nineml_al_implementation_and_xml.rst:85: WARNING: image file not readable: _static/images/build/SimpleRegimeGraph.png /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/developers/al/developer.rst:53: WARNING: failed to import nineml.abstraction_layer.component 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Include file u'/usr/src/RPM/BUILD/python-module-9ML-0.1.0/examples/AL/components_done/aeIF.py' not found or reading it failed /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/examples/examples_al_python.rst:49: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-9ML-0.1.0/examples/AL/components_done/coba_synapse.py' not found or reading it failed /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/examples/examples_al_python.rst:54: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-9ML-0.1.0/examples/AL/components_done/destexhe_ampa.py' not found or reading it failed /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/examples/examples_al_python.rst:59: WARNING: Include file u'/usr/src/RPM/BUILD/python-module-9ML-0.1.0/examples/AL/components_done/hh.py' not found or reading it failed 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WARNING: failed to import component.ComponentClass /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:41: WARNING: failed to import component.NamespaceAddress /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:41: WARNING: failed to import component.ComponentQueryer /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:41: WARNING: toctree references unknown document u'src_rst/reference/component.ComponentClass' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:41: WARNING: toctree references unknown document u'src_rst/reference/component.NamespaceAddress' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:41: WARNING: toctree references unknown document u'src_rst/reference/component.ComponentQueryer' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: failed to import component.Dynamics /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: failed to import component.Regime /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: failed to import component.Transition /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: failed to import component.OnEvent /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: failed to import component.OnCondition /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: toctree references unknown document u'src_rst/reference/component.Dynamics' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: toctree references unknown document u'src_rst/reference/component.Regime' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: toctree references unknown document u'src_rst/reference/component.Transition' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: toctree references unknown document u'src_rst/reference/component.OnEvent' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:54: WARNING: toctree references unknown document u'src_rst/reference/component.OnCondition' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:67: WARNING: failed to import component.StateVariable /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:67: WARNING: failed to import component.Alias /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:67: WARNING: failed to import component.StateAssignment /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:67: WARNING: failed to import component.TimeDerivative /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:67: WARNING: toctree references unknown document u'src_rst/reference/component.StateVariable' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:67: WARNING: toctree references unknown document u'src_rst/reference/component.Alias' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:67: WARNING: toctree references unknown document u'src_rst/reference/component.StateAssignment' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:67: WARNING: toctree references unknown document u'src_rst/reference/component.TimeDerivative' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:79: WARNING: failed to import component.Parameter /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:79: WARNING: failed to import component.Port /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:79: WARNING: failed to import component.AnalogPort /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:79: WARNING: failed to import component.EventPort /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:79: WARNING: toctree references unknown document u'src_rst/reference/component.Parameter' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:79: WARNING: toctree references unknown document u'src_rst/reference/component.Port' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:79: WARNING: toctree references unknown document u'src_rst/reference/component.AnalogPort' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:79: WARNING: toctree references unknown document u'src_rst/reference/component.EventPort' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:95: WARNING: failed to import component.OutputEvent /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component.rst:95: WARNING: toctree references unknown document u'src_rst/reference/component.OutputEvent' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: failed to import component.Condition /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: failed to import component.RegimeElement /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: failed to import component.Expression /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: failed to import component.Equation /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: failed to import component.ExpressionWithLHS /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: failed to import component.ExpressionWithSimpleLHS /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: failed to import component.NineMLMathParseError /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: toctree references unknown document u'src_rst/reference/component.Condition' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: toctree references unknown document u'src_rst/reference/component.RegimeElement' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: toctree references unknown document u'src_rst/reference/component.Expression' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: toctree references unknown document u'src_rst/reference/component.Equation' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: toctree references unknown document u'src_rst/reference/component.ExpressionWithLHS' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: toctree references unknown document u'src_rst/reference/component.ExpressionWithSimpleLHS' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:40: WARNING: toctree references unknown document u'src_rst/reference/component.NineMLMathParseError' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:55: WARNING: failed to import component.ComponentClassMixinFlatStructure /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:55: WARNING: failed to import component.ComponentClassMixinNamespaceStructure /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:55: WARNING: toctree references unknown document u'src_rst/reference/component.ComponentClassMixinFlatStructure' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_internal.rst:55: WARNING: toctree references unknown document u'src_rst/reference/component.ComponentClassMixinNamespaceStructure' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_modifiers.rst:41: WARNING: failed to import component_modifiers.ComponentModifier /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/component_modifiers.rst:41: WARNING: toctree references unknown document u'src_rst/reference/component_modifiers.ComponentModifier' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/readers.rst:41: WARNING: failed to import readers.XMLReader /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/readers.rst:41: WARNING: toctree references unknown document u'src_rst/reference/readers.XMLReader' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: failed to import utility.expect_single /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: failed to import utility.filter_expect_single /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: failed to import utility.filter_by_type /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: failed to import utility.filter_discrete_types /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: failed to import utility.assert_no_duplicates /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: failed to import utility.invert_dictionary /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: failed to import utility.flatten_first_level /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: failed to import utility.safe_dictionary_merge /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: failed to import utility.LocationMgr /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: toctree references unknown document u'src_rst/reference/utility.expect_single' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: toctree references unknown document u'src_rst/reference/utility.filter_expect_single' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: toctree references unknown document u'src_rst/reference/utility.filter_by_type' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: toctree references unknown document u'src_rst/reference/utility.filter_discrete_types' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: toctree references unknown document u'src_rst/reference/utility.assert_no_duplicates' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: toctree references unknown document u'src_rst/reference/utility.invert_dictionary' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: toctree references unknown document u'src_rst/reference/utility.flatten_first_level' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: toctree references unknown document u'src_rst/reference/utility.safe_dictionary_merge' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/utility_function.rst:41: WARNING: toctree references unknown document u'src_rst/reference/utility.LocationMgr' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/writers.rst:41: WARNING: failed to import writers.XMLWriter /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/writers.rst:41: WARNING: failed to import writers.DotWriter /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/writers.rst:41: WARNING: failed to import writers.TextWriter /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/writers.rst:41: WARNING: toctree references unknown document u'src_rst/reference/writers.XMLWriter' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/writers.rst:41: WARNING: toctree references unknown document u'src_rst/reference/writers.DotWriter' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/reference/writers.rst:41: WARNING: toctree references unknown document u'src_rst/reference/writers.TextWriter' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/src_rst/tutorials/al/class_overview.rst:88: WARNING: 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[100%] xml_spec /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/utility.expect_single' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/utility.filter_expect_single' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/utility.filter_by_type' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/utility.filter_discrete_types' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/utility.assert_no_duplicates' 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/usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/component.NamespaceAddress' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/component.ComponentQueryer' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/component.Dynamics' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/component.Regime' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/component.Transition' 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/usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/component.OutputEvent' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/readers.XMLReader' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/writers.XMLWriter' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/writers.DotWriter' /usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api/source/index.rst:: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/writers.TextWriter' 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contains reference to nonexisting document u'src_rst/reference/writers.XMLWriter' :: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/writers.DotWriter' :: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/writers.TextWriter' generating indices... genindex writing additional pages... search copying static files... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 312 warnings. Build finished; now you can process the pickle files. make: Leaving directory '/usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api' + make html make: Entering directory '/usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api' sphinx-build -b html -d build/doctrees source build/html Running Sphinx v1.6.5 making output directory... Generating grammar tables from /usr/lib/python2.7/site-packages/sphinx/pycode/Grammar-py2.txt WARNING: sphinx.ext.pngmath has been deprecated. Please use sphinx.ext.imgmath instead. Initializing Spelling Checker loading pickled environment... done [autosummary] generating autosummary for: index.rst, nineml_al_implementation_and_xml.rst, python_nineml.rst, src_rst/developers/al/developer.rst, src_rst/developers/al/visitors.rst, src_rst/developers/developer.rst, src_rst/developers/utility/developer.rst, src_rst/examples/examples_al_python.rst, src_rst/overview/nineml_overview.rst, src_rst/reference/component.rst, ..., src_rst/reference/validators.rst, src_rst/reference/visitors.rst, src_rst/reference/writers.rst, src_rst/tutorials/al/al.rst, src_rst/tutorials/al/class_overview.rst, src_rst/tutorials/al/hierarchical_components.rst, src_rst/tutorials/al/importing_exporting.rst, src_rst/tutorials/al/interfacing_pynn.rst, src_rst/tutorials/installation/installation.rst, xml_spec.rst WARNING: [autosummary] failed to import u'nineml.abstraction_layer.component.Alias': no module named nineml.abstraction_layer.component.Alias WARNING: [autosummary] failed to import 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contains reference to nonexisting document u'src_rst/reference/writers.XMLWriter' :: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/writers.DotWriter' :: WARNING: toctree contains reference to nonexisting document u'src_rst/reference/writers.TextWriter' generating indices... genindex writing additional pages... search copying static files... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 226 warnings. Build finished. The HTML pages are in build/html. make: Leaving directory '/usr/src/RPM/BUILD/python-module-9ML-0.1.0/doc/python_nineml_api' + popd ~/RPM/BUILD/python-module-9ML-0.1.0 + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.64602 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/python-module-9ML-buildroot + : + /bin/rm -rf -- /usr/src/tmp/python-module-9ML-buildroot + PATH=/usr/libexec/rpm-build:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games + cd python-module-9ML-0.1.0 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export FFLAGS + /usr/bin/python2.7 setup.py install --skip-build --root=/usr/src/tmp/python-module-9ML-buildroot --force running install running install_lib creating /usr/src/tmp/python-module-9ML-buildroot creating /usr/src/tmp/python-module-9ML-buildroot/usr creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7 creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/aeIF.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/coba_synapse.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/destexhe_ampa.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hh.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hierachical_iaf_1coba.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hierachical_iaf_2coba.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hierachical_iaf_3coba.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hierachical_iaf_nmda.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/iaf.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/iaf_sfa_relref.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/if_cond_exp.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/izhikevich.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/izhikevich2.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/leaky_iaf.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/morris_lecar.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/nmda.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/simple_current_clamp.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos copying build/lib/nineml/examples/AL/demos/demo1a_load_save_coba1.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos copying build/lib/nineml/examples/AL/demos/demo1b_load_save_izekevich.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos copying build/lib/nineml/examples/AL/demos/demo2_poisson_spike_gen.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/utility copying build/lib/nineml/utility/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/utility creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/maths copying build/lib/nineml/maths/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/maths creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/exceptions copying build/lib/nineml/exceptions/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/exceptions copying build/lib/nineml/exceptions/exceptions.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/exceptions creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/dot_writer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/mod_file_writer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/text_writer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/xml_writer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors copying build/lib/nineml/abstraction_layer/visitors/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors copying build/lib/nineml/abstraction_layer/visitors/base.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors copying build/lib/nineml/abstraction_layer/visitors/cloner.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/base.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/component_validator.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_general.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_namingconflicts.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_ports.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_regimenames.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_types.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/equality_checker.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/record_value.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/test_write_dot.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/testable_component.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers copying build/lib/nineml/abstraction_layer/readers/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers copying build/lib/nineml/abstraction_layer/readers/xml_reader.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening copying build/lib/nineml/abstraction_layer/flattening/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening copying build/lib/nineml/abstraction_layer/flattening/flattening.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component_modifiers copying build/lib/nineml/abstraction_layer/component_modifiers/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component_modifiers copying build/lib/nineml/abstraction_layer/component_modifiers/component_modifier.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component_modifiers creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse copying build/lib/nineml/abstraction_layer/component/parse/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse copying build/lib/nineml/abstraction_layer/component/parse/cond_parse.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse copying build/lib/nineml/abstraction_layer/component/parse/expr_parse.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse copying build/lib/nineml/abstraction_layer/component/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/component.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/componentqueryer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/conditions.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/dynamics.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/events.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/expressions.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/interface.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/namespaceaddress.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/ports.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/syntacticsugar.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/util.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer copying build/lib/nineml/abstraction_layer/util.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer copying build/lib/nineml/abstraction_layer/xmlns.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer copying build/lib/nineml/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml copying build/lib/nineml/user_layer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/aeIF.py to aeIF.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/coba_synapse.py to coba_synapse.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/destexhe_ampa.py to destexhe_ampa.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hh.py to hh.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.py to hierachical_iaf_1coba.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.py to hierachical_iaf_2coba.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.py to hierachical_iaf_3coba.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.py to hierachical_iaf_nmda.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf.py to iaf.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf_sfa_relref.py to iaf_sfa_relref.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/if_cond_exp.py to if_cond_exp.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich.py to izhikevich.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich2.py to izhikevich2.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/leaky_iaf.py to leaky_iaf.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/morris_lecar.py to morris_lecar.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py to nestequivalent_iaf_cond_exp.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nmda.py to nmda.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/simple_current_clamp.py to simple_current_clamp.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1a_load_save_coba1.py to demo1a_load_save_coba1.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1b_load_save_izekevich.py to demo1b_load_save_izekevich.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.py to demo2_poisson_spike_gen.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/utility/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/maths/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/exceptions/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/exceptions/exceptions.py to exceptions.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/dot_writer.py to dot_writer.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/mod_file_writer.py to mod_file_writer.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/text_writer.py to text_writer.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/xml_writer.py to xml_writer.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/base.py to base.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.py to cloner.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/base.py to base.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/component_validator.py to component_validator.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_general.py to cv_general.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.py to cv_namingconflicts.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_ports.py to cv_ports.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_regimenames.py to cv_regimenames.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_types.py to cv_types.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/equality_checker.py to equality_checker.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/record_value.py to record_value.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py to simulate_pynn_neuron.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/test_write_dot.py to test_write_dot.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py to test_xml_write_read_write.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py to testable_component.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers/xml_reader.py to xml_reader.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening/flattening.py to flattening.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component_modifiers/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component_modifiers/component_modifier.py to component_modifier.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse/cond_parse.py to cond_parse.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py to expr_parse.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py to component.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/componentqueryer.py to componentqueryer.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/conditions.py to conditions.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/dynamics.py to dynamics.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/events.py to events.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/expressions.py to expressions.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/interface.py to interface.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/namespaceaddress.py to namespaceaddress.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/ports.py to ports.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/syntacticsugar.py to syntacticsugar.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/util.py to util.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/util.py to util.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/xmlns.py to xmlns.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/__init__.py to __init__.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/user_layer.py to user_layer.pyc running install_egg_info running egg_info writing requirements to 9ML.egg-info/requires.txt writing 9ML.egg-info/PKG-INFO writing top-level names to 9ML.egg-info/top_level.txt writing dependency_links to 9ML.egg-info/dependency_links.txt reading manifest file '9ML.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'nineml/.deprecated' warning: no previously-included files matching '.gitignore' found under directory '*' writing manifest file '9ML.egg-info/SOURCES.txt' Copying 9ML.egg-info to /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/9ML-0.1.0-py2.7.egg-info running install_scripts + pushd ../python3 ~/RPM/BUILD/python3 ~/RPM/BUILD/python-module-9ML-0.1.0 + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic' + export FFLAGS + /usr/bin/python3 setup.py install --skip-build --root=/usr/src/tmp/python-module-9ML-buildroot --force running install running install_lib creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3 creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/aeIF.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/coba_synapse.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/destexhe_ampa.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hh.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hierachical_iaf_1coba.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hierachical_iaf_2coba.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hierachical_iaf_3coba.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/hierachical_iaf_nmda.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/iaf.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/iaf_sfa_relref.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/if_cond_exp.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/izhikevich.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/izhikevich2.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/leaky_iaf.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/morris_lecar.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/nmda.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done copying build/lib/nineml/examples/AL/components_done/simple_current_clamp.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos copying build/lib/nineml/examples/AL/demos/demo1a_load_save_coba1.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos copying build/lib/nineml/examples/AL/demos/demo1b_load_save_izekevich.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos copying build/lib/nineml/examples/AL/demos/demo2_poisson_spike_gen.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/utility copying build/lib/nineml/utility/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/utility creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/maths copying build/lib/nineml/maths/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/maths creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions copying build/lib/nineml/exceptions/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions copying build/lib/nineml/exceptions/exceptions.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/dot_writer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/mod_file_writer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/text_writer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers copying build/lib/nineml/abstraction_layer/writers/xml_writer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors copying build/lib/nineml/abstraction_layer/visitors/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors copying build/lib/nineml/abstraction_layer/visitors/base.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors copying build/lib/nineml/abstraction_layer/visitors/cloner.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/base.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/component_validator.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_general.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_namingconflicts.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_ports.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_regimenames.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/cv_types.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators copying build/lib/nineml/abstraction_layer/validators/equality_checker.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/record_value.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/test_write_dot.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils copying build/lib/nineml/abstraction_layer/testing_utils/testable_component.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers copying build/lib/nineml/abstraction_layer/readers/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers copying build/lib/nineml/abstraction_layer/readers/xml_reader.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening copying build/lib/nineml/abstraction_layer/flattening/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening copying build/lib/nineml/abstraction_layer/flattening/flattening.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers copying build/lib/nineml/abstraction_layer/component_modifiers/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers copying build/lib/nineml/abstraction_layer/component_modifiers/component_modifier.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component creating /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse copying build/lib/nineml/abstraction_layer/component/parse/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse copying build/lib/nineml/abstraction_layer/component/parse/cond_parse.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse copying build/lib/nineml/abstraction_layer/component/parse/expr_parse.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse copying build/lib/nineml/abstraction_layer/component/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/component.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/componentqueryer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/conditions.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/dynamics.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/events.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/expressions.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/interface.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/namespaceaddress.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/ports.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/syntacticsugar.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/component/util.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component copying build/lib/nineml/abstraction_layer/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer copying build/lib/nineml/abstraction_layer/util.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer copying build/lib/nineml/abstraction_layer/xmlns.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer copying build/lib/nineml/__init__.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml copying build/lib/nineml/user_layer.py -> /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/aeIF.py to aeIF.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/coba_synapse.py to coba_synapse.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/destexhe_ampa.py to destexhe_ampa.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hh.py to hh.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.py to hierachical_iaf_1coba.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.py to hierachical_iaf_2coba.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.py to hierachical_iaf_3coba.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.py to hierachical_iaf_nmda.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/iaf.py to iaf.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/iaf_sfa_relref.py to iaf_sfa_relref.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/if_cond_exp.py to if_cond_exp.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/izhikevich.py to izhikevich.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/izhikevich2.py to izhikevich2.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/leaky_iaf.py to leaky_iaf.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/morris_lecar.py to morris_lecar.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py to nestequivalent_iaf_cond_exp.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/nmda.py to nmda.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/simple_current_clamp.py to simple_current_clamp.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo1a_load_save_coba1.py to demo1a_load_save_coba1.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo1b_load_save_izekevich.py to demo1b_load_save_izekevich.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.py to demo2_poisson_spike_gen.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/utility/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/maths/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/exceptions.py to exceptions.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/dot_writer.py to dot_writer.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/mod_file_writer.py to mod_file_writer.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/text_writer.py to text_writer.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/xml_writer.py to xml_writer.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/base.py to base.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py to cloner.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/base.py to base.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py to component_validator.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_general.py to cv_general.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.py to cv_namingconflicts.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_ports.py to cv_ports.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_regimenames.py to cv_regimenames.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_types.py to cv_types.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/equality_checker.py to equality_checker.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/record_value.py to record_value.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py to simulate_pynn_neuron.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/test_write_dot.py to test_write_dot.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py to test_xml_write_read_write.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py to testable_component.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers/xml_reader.py to xml_reader.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/flattening.py to flattening.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/component_modifier.py to component_modifier.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/cond_parse.py to cond_parse.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py to expr_parse.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py to component.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/componentqueryer.py to componentqueryer.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/conditions.py to conditions.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py to dynamics.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/events.py to events.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/expressions.py to expressions.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/interface.py to interface.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/namespaceaddress.py to namespaceaddress.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/ports.py to ports.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/syntacticsugar.py to syntacticsugar.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/util.py to util.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/util.py to util.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/xmlns.py to xmlns.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/__init__.py to __init__.cpython-38.pyc byte-compiling /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/user_layer.py to user_layer.cpython-38.pyc running install_egg_info running egg_info writing 9ML.egg-info/PKG-INFO writing dependency_links to 9ML.egg-info/dependency_links.txt writing requirements to 9ML.egg-info/requires.txt writing top-level names to 9ML.egg-info/top_level.txt reading manifest file '9ML.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'nineml/.deprecated' warning: no previously-included files matching '.gitignore' found under directory '*' writing manifest file '9ML.egg-info/SOURCES.txt' Copying 9ML.egg-info to /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/9ML-0.1.0-py3.8.egg-info running install_scripts + popd ~/RPM/BUILD/python-module-9ML-0.1.0 + cp -fR doc/python_nineml_api/build/pickle /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/ + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/python-module-9ML-buildroot (auto) Verifying and fixing files in /usr/src/tmp/python-module-9ML-buildroot (binconfig,pkgconfig,libtool,desktop,gnuconfig) Checking contents of files in /usr/src/tmp/python-module-9ML-buildroot/ (default) Compressing files in /usr/src/tmp/python-module-9ML-buildroot (auto) Adjusting library links in /usr/src/tmp/python-module-9ML-buildroot ./usr/lib: (from :0) Verifying ELF objects in /usr/src/tmp/python-module-9ML-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Bytecompiling python modules in /usr/src/tmp/python-module-9ML-buildroot using /usr/bin/python2.7 unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse/cond_parse.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse/expr_parse.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse/cond_parse.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/componentqueryer.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/conditions.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/dynamics.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/events.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/expressions.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/interface.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/namespaceaddress.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/ports.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/syntacticsugar.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/util.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/componentqueryer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/conditions.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/dynamics.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/events.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/expressions.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/interface.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/namespaceaddress.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/ports.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/syntacticsugar.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/util.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component_modifiers/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component_modifiers/component_modifier.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component_modifiers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component_modifiers/component_modifier.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening/flattening.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening/flattening.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers/xml_reader.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers/xml_reader.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/record_value.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/test_write_dot.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/test_xml_write_read_write.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/testable_component.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/record_value.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/test_write_dot.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/base.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/component_validator.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_general.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_ports.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_regimenames.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_types.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/equality_checker.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/base.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/component_validator.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_general.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_ports.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_regimenames.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_types.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/equality_checker.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/base.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/base.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/dot_writer.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/mod_file_writer.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/text_writer.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/xml_writer.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/dot_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/mod_file_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/text_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/xml_writer.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/util.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/xmlns.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/util.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/xmlns.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/aeIF.pyc unlink 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/usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf_sfa_relref.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/if_cond_exp.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich2.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/leaky_iaf.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/morris_lecar.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nmda.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/simple_current_clamp.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/aeIF.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/coba_synapse.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/destexhe_ampa.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hh.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf_sfa_relref.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/if_cond_exp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich2.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/leaky_iaf.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/morris_lecar.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nmda.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/simple_current_clamp.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1a_load_save_coba1.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1b_load_save_izekevich.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1a_load_save_coba1.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1b_load_save_izekevich.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/exceptions/__init__.pyc unlink 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/usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/record_value.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/test_write_dot.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__pycache__/__init__.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__pycache__/base.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__pycache__/component_validator.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__pycache__/cv_general.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__pycache__/cv_namingconflicts.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__pycache__/cv_ports.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__pycache__/cv_regimenames.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__pycache__/cv_types.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__pycache__/equality_checker.cpython-38.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/base.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_general.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_ports.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_regimenames.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_types.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/equality_checker.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__pycache__/__init__.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__pycache__/base.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__pycache__/cloner.cpython-38.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/base.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__pycache__/__init__.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__pycache__/dot_writer.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__pycache__/mod_file_writer.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__pycache__/text_writer.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__pycache__/xml_writer.cpython-38.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/dot_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/mod_file_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/text_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/xml_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/util.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/xmlns.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/aeIF.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/coba_synapse.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/destexhe_ampa.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/hh.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/hierachical_iaf_1coba.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/hierachical_iaf_2coba.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/hierachical_iaf_3coba.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/hierachical_iaf_nmda.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/iaf.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/iaf_sfa_relref.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/if_cond_exp.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/izhikevich.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/izhikevich2.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/leaky_iaf.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/morris_lecar.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/nestequivalent_iaf_cond_exp.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/nmda.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/__pycache__/simple_current_clamp.cpython-38.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/aeIF.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/coba_synapse.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/destexhe_ampa.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hh.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/iaf.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/iaf_sfa_relref.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/if_cond_exp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/izhikevich.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/izhikevich2.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/leaky_iaf.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/morris_lecar.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/nmda.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/simple_current_clamp.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/__pycache__/demo1a_load_save_coba1.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/__pycache__/demo1b_load_save_izekevich.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/__pycache__/demo2_poisson_spike_gen.cpython-38.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo1a_load_save_coba1.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo1b_load_save_izekevich.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/__pycache__/__init__.cpython-38.pyc unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/__pycache__/exceptions.cpython-38.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/exceptions.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/maths/__pycache__/__init__.cpython-38.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/maths/__init__.py unlink /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/utility/__pycache__/__init__.cpython-38.pyc compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/utility/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/user_layer.py Bytecompiling python3 modules with optimization in /usr/src/tmp/python-module-9ML-buildroot using /usr/bin/python3 -O compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/cond_parse.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/componentqueryer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/conditions.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/events.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/expressions.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/interface.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/namespaceaddress.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/ports.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/syntacticsugar.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/util.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/component_modifier.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/flattening.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers/xml_reader.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/record_value.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/test_write_dot.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/base.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_general.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_ports.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_regimenames.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_types.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/equality_checker.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/base.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/dot_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/mod_file_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/text_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/xml_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/util.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/xmlns.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/aeIF.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/coba_synapse.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/destexhe_ampa.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hh.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/iaf.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/iaf_sfa_relref.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/if_cond_exp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/izhikevich.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/izhikevich2.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/leaky_iaf.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/morris_lecar.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/nmda.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/simple_current_clamp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo1a_load_save_coba1.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo1b_load_save_izekevich.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/exceptions.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/maths/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/utility/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/user_layer.py Bytecompiling python3 modules with optimization-2 in /usr/src/tmp/python-module-9ML-buildroot using /usr/bin/python3 -OO compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/cond_parse.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/componentqueryer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/conditions.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/events.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/expressions.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/interface.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/namespaceaddress.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/ports.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/syntacticsugar.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/util.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/component_modifier.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/flattening.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers/xml_reader.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/record_value.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/test_write_dot.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/test_xml_write_read_write.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/base.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_general.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_ports.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_regimenames.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_types.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/equality_checker.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/base.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/dot_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/mod_file_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/text_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/xml_writer.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/util.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/xmlns.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/aeIF.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/coba_synapse.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/destexhe_ampa.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hh.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/iaf.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/iaf_sfa_relref.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/if_cond_exp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/izhikevich.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/izhikevich2.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/leaky_iaf.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/morris_lecar.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/nmda.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/components_done/simple_current_clamp.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo1a_load_save_coba1.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo1b_load_save_izekevich.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/exceptions.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/maths/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/utility/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/__init__.py compile /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/user_layer.py Hardlinking identical .pyc and .opt-?.pyc files './usr/lib/python3/site-packages/nineml/__pycache__/__init__.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/__pycache__/__init__.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/__pycache__/__init__.cpython-38.opt-2.pyc' => './usr/lib/python3/site-packages/nineml/__pycache__/__init__.cpython-38.opt-1.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/__pycache__/xmlns.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/__pycache__/xmlns.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/__pycache__/xmlns.cpython-38.opt-2.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/__pycache__/xmlns.cpython-38.opt-1.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/__pycache__/util.cpython-38.opt-2.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/__pycache__/util.cpython-38.opt-1.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/__pycache__/__init__.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/__pycache__/__init__.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/util.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/util.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/syntacticsugar.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/syntacticsugar.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/syntacticsugar.cpython-38.opt-2.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/syntacticsugar.cpython-38.opt-1.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/ports.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/ports.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/interface.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/interface.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/events.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/events.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/conditions.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/conditions.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/__init__.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/__pycache__/__init__.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__pycache__/expr_parse.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__pycache__/expr_parse.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__pycache__/cond_parse.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__pycache__/cond_parse.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__pycache__/__init__.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__pycache__/__init__.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__pycache__/__init__.cpython-38.opt-2.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__pycache__/__init__.cpython-38.opt-1.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__pycache__/component_modifier.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__pycache__/component_modifier.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__pycache__/__init__.cpython-38.opt-1.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__pycache__/__init__.cpython-38.pyc' './usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__pycache__/__init__.cpython-38.opt-2.pyc' => './usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__pycache__/__init__.cpython-38.opt-1.pyc' 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'./usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/test_write_dot.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/test_write_dot.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/record_value.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/record_value.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_regimenames.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_regimenames.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/base.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/base.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/__init__.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/__init__.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/__init__.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/__init__.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/text_writer.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/text_writer.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/mod_file_writer.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/mod_file_writer.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/dot_writer.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/dot_writer.pyc' './usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/__init__.pyo' => './usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/__init__.pyc' './usr/lib/python2.7/site-packages/nineml/exceptions/__init__.pyo' => './usr/lib/python2.7/site-packages/nineml/exceptions/__init__.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1b_load_save_izekevich.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1b_load_save_izekevich.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1a_load_save_coba1.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo1a_load_save_coba1.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/simple_current_clamp.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/simple_current_clamp.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nmda.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nmda.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/morris_lecar.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/morris_lecar.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/leaky_iaf.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/leaky_iaf.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich2.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich2.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/izhikevich.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/if_cond_exp.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/if_cond_exp.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf_sfa_relref.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf_sfa_relref.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/iaf.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hh.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hh.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/destexhe_ampa.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/destexhe_ampa.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/coba_synapse.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/coba_synapse.pyc' './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/aeIF.pyo' => './usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/aeIF.pyc' Processing files: python-module-9ML-0.1.0-alt4.1.2 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.68831 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python-module-9ML-0.1.0 + DOCDIR=/usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-0.1.0 + export DOCDIR + rm -rf /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-0.1.0 + /bin/mkdir -p /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-0.1.0 + cp -prL AUTHORS README /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-0.1.0 + chmod -R go-w /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-0.1.0 + chmod -R a+rX /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-0.1.0 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.nwSY1u find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.toH6mu find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/__init__.py: hiding maths, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/__init__.py: hiding exceptions, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/__init__.py: hiding utility, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/__init__.py: hiding abstraction_layer, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/__init__.py: hiding abstraction_layer, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding xmlns, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding component, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding component, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding visitors, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding readers, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding writers, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding validators, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding component_modifiers, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: hiding flattening, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/__init__.py: skipping testing_utils python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding dynamics, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding dynamics, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding interface, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding expressions, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding expressions, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding expressions, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding conditions, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding ports, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding ports, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding events, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding namespaceaddress, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding component, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding component, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding component, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding componentqueryer, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding util, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding parse, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding syntacticsugar, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/__init__.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding namespaceaddress, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding componentqueryer, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding dynamics, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding interface, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding dynamics, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding ports, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: line=117 IGNORE (for REQ=slight and deep=11) module=nineml /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: line=136 IGNORE (for REQ=slight and deep=11) module=nineml /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: line=188 IGNORE (for REQ=slight and deep=11) module=nineml /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: line=246 IGNORE (for REQ=slight and deep=11) module=nineml python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: line=445 IGNORE (for REQ=slight and deep=11) module=nineml /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/component.py: line=549 IGNORE (for REQ=slight and deep=11) module=nineml python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/componentqueryer.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/conditions.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/conditions.py: hiding expressions, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/conditions.py: hiding expressions, which SEEMS TO BE SELF-SATISFIED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/conditions.py: line=17 IGNORE (for REQ=slight and deep=11) module=parse /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/component/conditions.py: line=50 IGNORE (for REQ=slight and deep=11) module=util python.req: 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/usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/flattening/flattening.py: line=366 IGNORE (for REQ=slight and deep=11) module=collections python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers/__init__.py: hiding xml_reader, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/readers/xml_reader.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/util.py: hiding component, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/validators/__init__.py: hiding component_validator, which SEEMS TO BE SELF-SATISFIED python.req: 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/usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/__init__.py: hiding base, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/__init__.py: hiding cloner, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/__init__.py: hiding cloner, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/__init__.py: hiding cloner, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.py: hiding base, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.py: line=249 IGNORE (for REQ=slight and deep=11) module=nineml /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.py: line=260 IGNORE (for REQ=slight and deep=11) module=nineml /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.py: line=272 IGNORE (for REQ=slight and deep=11) module=nineml /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/visitors/cloner.py: line=283 IGNORE (for REQ=slight and deep=11) module=nineml python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/__init__.py: hiding xml_writer, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/__init__.py: hiding text_writer, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/__init__.py: hiding dot_writer, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/__init__.py: hiding mod_file_writer, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/dot_writer.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/mod_file_writer.py: line=8 IGNORE (for REQ=slight and deep=12) module=nineml2nmodl python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/xml_writer.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/xml_writer.py: line=7 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/writers/xml_writer.py: line=18 IGNORE (for REQ=slight and deep=20) module=nineml python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/exceptions/__init__.py: hiding exceptions, which SEEMS TO BE SELF-SATISFIED /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/user_layer.py: line=187 IGNORE (for REQ=slight and deep=11) module=StringIO /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/user_layer.py: line=311 IGNORE (for REQ=slight and deep=11) module=nineml python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/utility/__init__.py: skipping sys python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/utility/__init__.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/utility/__init__.py: hiding nineml, which SEEMS TO BE SELF-SATISFIED Provides: python2.7-module-9ML = 0.1.0-alt4.1.2, python2.7(nineml), python2.7(nineml.abstraction_layer), python2.7(nineml.abstraction_layer.component), python2.7(nineml.abstraction_layer.component.component), python2.7(nineml.abstraction_layer.component.componentqueryer), python2.7(nineml.abstraction_layer.component.conditions), python2.7(nineml.abstraction_layer.component.dynamics), python2.7(nineml.abstraction_layer.component.events), python2.7(nineml.abstraction_layer.component.expressions), python2.7(nineml.abstraction_layer.component.interface), python2.7(nineml.abstraction_layer.component.namespaceaddress), python2.7(nineml.abstraction_layer.component.parse), python2.7(nineml.abstraction_layer.component.parse.cond_parse), python2.7(nineml.abstraction_layer.component.parse.expr_parse), python2.7(nineml.abstraction_layer.component.ports), python2.7(nineml.abstraction_layer.component.syntacticsugar), python2.7(nineml.abstraction_layer.component.util), python2.7(nineml.abstraction_layer.component_modifiers), python2.7(nineml.abstraction_layer.component_modifiers.component_modifier), python2.7(nineml.abstraction_layer.flattening), python2.7(nineml.abstraction_layer.flattening.flattening), python2.7(nineml.abstraction_layer.readers), python2.7(nineml.abstraction_layer.readers.xml_reader), python2.7(nineml.abstraction_layer.util), python2.7(nineml.abstraction_layer.validators), python2.7(nineml.abstraction_layer.validators.base), python2.7(nineml.abstraction_layer.validators.component_validator), python2.7(nineml.abstraction_layer.validators.cv_general), python2.7(nineml.abstraction_layer.validators.cv_namingconflicts), python2.7(nineml.abstraction_layer.validators.cv_ports), python2.7(nineml.abstraction_layer.validators.cv_regimenames), python2.7(nineml.abstraction_layer.validators.cv_types), python2.7(nineml.abstraction_layer.validators.equality_checker), python2.7(nineml.abstraction_layer.visitors), python2.7(nineml.abstraction_layer.visitors.base), python2.7(nineml.abstraction_layer.visitors.cloner), python2.7(nineml.abstraction_layer.writers), python2.7(nineml.abstraction_layer.writers.dot_writer), python2.7(nineml.abstraction_layer.writers.mod_file_writer), python2.7(nineml.abstraction_layer.writers.text_writer), python2.7(nineml.abstraction_layer.writers.xml_writer), python2.7(nineml.abstraction_layer.xmlns), python2.7(nineml.exceptions), python2.7(nineml.exceptions.exceptions), python2.7(nineml.maths), python2.7(nineml.user_layer), python2.7(nineml.utility) Requires: python = 2.7, /usr/lib/python2.7/site-packages, python-modules, python2.7(Cheetah), python2.7(lxml), python2.7(numpy), python2.7(ply) Processing files: python-module-9ML-tests-0.1.0-alt4.1.2 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.rYitrw find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.pFYbds find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: hiding simulate_pynn_neuron, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: hiding record_value, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: hiding testable_component, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: hiding test_xml_write_read_write, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: hiding test_write_dot, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: skipping sys /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=10 IGNORE (for REQ=slight and deep=8) module=nineml /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=13 IGNORE (for REQ=slight and deep=8) module=nineml /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=15 IGNORE (for REQ=slight and deep=8) module=pyNN /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=16 IGNORE (for REQ=slight and deep=8) module=pyNN /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=17 IGNORE (for REQ=slight and deep=8) module=pyNN /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=19 IGNORE (for REQ=slight and deep=8) module=pyNN /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=93 IGNORE (for REQ=slight and deep=12) module=pylab python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: skipping sys /usr/lib/rpm/python.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=94 IGNORE (for REQ=slight and deep=11) module=nineml Provides: python2.7(nineml.abstraction_layer.testing_utils), python2.7(nineml.abstraction_layer.testing_utils.record_value), python2.7(nineml.abstraction_layer.testing_utils.simulate_pynn_neuron), python2.7(nineml.abstraction_layer.testing_utils.test_write_dot), python2.7(nineml.abstraction_layer.testing_utils.test_xml_write_read_write), python2.7(nineml.abstraction_layer.testing_utils.testable_component) Requires: python-module-9ML = 0.1.0-alt4.1.2, /usr/lib/python2.7/site-packages, python-modules, python2.7(nineml) Processing files: python-module-9ML-examples-0.1.0-alt4.1.2 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.1dwZ1v find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.kYKaev find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.py: hiding coba_synapse, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_1coba.py: hiding iaf, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.py: hiding coba_synapse, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_2coba.py: hiding iaf, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.py: hiding coba_synapse, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_3coba.py: hiding iaf, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.py: hiding nmda, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.py: hiding coba_synapse, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/hierachical_iaf_nmda.py: hiding iaf, which SEEMS TO BE SELF-SATISFIED python.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python2.7/site-packages/nineml/examples/AL/components_done/nestequivalent_iaf_cond_exp.py: hiding hierachical_iaf_2coba, which SEEMS TO BE SELF-SATISFIED Requires: python-module-9ML = 0.1.0-alt4.1.2, /usr/lib/python2.7/site-packages, python2-base, python2.7(nineml), python2.7(unittest) Processing files: python-module-9ML-pickles-0.1.0-alt4.1.2 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.CwAwbw find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.6jUUTv find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) Requires: /usr/lib/python2.7/site-packages Processing files: python-module-9ML-docs-0.1.0-alt4.1.2 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.67961 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python-module-9ML-0.1.0 + DOCDIR=/usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-docs-0.1.0 + export DOCDIR + rm -rf /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-docs-0.1.0 + /bin/mkdir -p /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-docs-0.1.0 + cp -prL doc/python_nineml_api/build/html/_sources doc/python_nineml_api/build/html/_static doc/python_nineml_api/build/html/genindex.html doc/python_nineml_api/build/html/index.html doc/python_nineml_api/build/html/nineml_al_implementation_and_xml.html doc/python_nineml_api/build/html/objects.inv doc/python_nineml_api/build/html/python_nineml.html doc/python_nineml_api/build/html/search.html doc/python_nineml_api/build/html/searchindex.js doc/python_nineml_api/build/html/src_rst doc/python_nineml_api/build/html/xml_spec.html /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-docs-0.1.0 + chmod -R go-w /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-docs-0.1.0 + chmod -R a+rX /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python-module-9ML-docs-0.1.0 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.QEs4ov find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.fMhaeu find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) Processing files: python3-module-9ML-0.1.0-alt4.1.2 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.5228 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd python-module-9ML-0.1.0 + DOCDIR=/usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python3-module-9ML-0.1.0 + export DOCDIR + rm -rf /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python3-module-9ML-0.1.0 + /bin/mkdir -p /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python3-module-9ML-0.1.0 + cp -prL AUTHORS README /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python3-module-9ML-0.1.0 + chmod -R go-w /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python3-module-9ML-0.1.0 + chmod -R a+rX /usr/src/tmp/python-module-9ML-buildroot/usr/share/doc/python3-module-9ML-0.1.0 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.VEM29s find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.kr7zEw find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/__init__.py: line=4 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/__init__.py: line=5 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/__init__.py: line=6 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/__init__.py: line=7 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/__init__.py: line=9 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=8 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=11 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=12 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=14 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=15 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=16 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=17 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=18 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=19 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/__init__.py: line=21 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=8 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=9 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=10 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=11 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=12 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=13 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=14 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=15 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=16 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=18 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=19 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=20 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=21 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=22 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=23 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=24 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=26 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/__init__.py: line=29 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=7 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=8 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=10 possible relative import from ., UNIMPLEMENTED python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=13 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=14 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=15 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=117 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.visitors /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=136 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.writers /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=188 IGNORE (for REQ=slight and deep=11) module=nineml.utility /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=246 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.visitors.cloner /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=445 IGNORE (for REQ=slight and deep=11) module=nineml.utility /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/component.py: line=549 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.validators python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/componentqueryer.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/conditions.py: line=3 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/conditions.py: line=4 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/conditions.py: line=17 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/conditions.py: line=50 possible relative import from ., UNIMPLEMENTED python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py: line=5 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py: line=6 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py: line=7 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py: line=8 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py: line=50 IGNORE (for REQ=slight and deep=11) module=nineml.utility /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py: line=223 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.visitors /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/dynamics.py: line=540 IGNORE (for REQ=slight and deep=11) module=nineml.utility /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/events.py: line=24 IGNORE (for REQ=slight and deep=11) module=nineml python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/expressions.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/expressions.py: line=8 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/expressions.py: line=10 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/expressions.py: line=430 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__init__.py: line=9 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/__init__.py: line=10 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/cond_parse.py: line=21 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/cond_parse.py: line=23 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/cond_parse.py: line=198 IGNORE (for REQ=slight and deep=11) module=nineml.maths /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py: line=50 IGNORE (for REQ=slight and deep=11) module=nineml.utility /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py: line=64 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.component.parse /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py: line=108 IGNORE (for REQ=slight and deep=15) module=nineml.abstraction_layer.component.parse /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py: line=116 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.component.parse /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/parse/expr_parse.py: line=171 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.component.parse /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/util.py: line=13 IGNORE (for REQ=slight and deep=8) module=nineml.abstraction_layer.readers /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/util.py: line=28 IGNORE (for REQ=slight and deep=12) module=nineml.abstraction_layer /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/util.py: line=40 IGNORE (for REQ=slight and deep=12) module=nineml.abstraction_layer /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component/util.py: line=58 IGNORE (for REQ=slight and deep=12) module=nineml.abstraction_layer /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/component_modifiers/__init__.py: line=2 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/__init__.py: line=3 possible relative import from ., UNIMPLEMENTED python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/flattening.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/flattening.py: line=330 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.visitors /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/flattening/flattening.py: line=366 IGNORE (for REQ=slight and deep=11) module=collections /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/readers/__init__.py: line=2 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/util.py: line=2 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__init__.py: line=1 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/__init__.py: line=2 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/base.py: line=4 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=5 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=6 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=7 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=8 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=9 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=10 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=12 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=13 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=14 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=15 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=16 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=17 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=18 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=19 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/component_validator.py: line=32 IGNORE (for REQ=slight and deep=16) module=os /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_general.py: line=5 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_namingconflicts.py: line=7 possible relative import from ., UNIMPLEMENTED python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_ports.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/validators/cv_regimenames.py: line=2 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__init__.py: line=2 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__init__.py: line=3 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__init__.py: line=4 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/__init__.py: line=5 possible relative import from ., UNIMPLEMENTED python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/base.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py: line=3 possible relative import from ., UNIMPLEMENTED python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py: line=249 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.component /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py: line=260 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.component /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py: line=272 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.component /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/visitors/cloner.py: line=283 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer.component /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__init__.py: line=2 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__init__.py: line=4 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__init__.py: line=5 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/__init__.py: line=6 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/mod_file_writer.py: line=8 IGNORE (for REQ=slight and deep=12) module=nineml2nmodl python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/xml_writer.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/xml_writer.py: line=7 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/writers/xml_writer.py: line=18 IGNORE (for REQ=slight and deep=20) module=nineml.abstraction_layer.flattening /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/exceptions/__init__.py: line=1 possible relative import from ., UNIMPLEMENTED python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/user_layer.py: skipping itertools /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/user_layer.py: line=188 IGNORE (for REQ=slight and deep=11) module=io /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/user_layer.py: line=312 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/utility/__init__.py: skipping sys python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/utility/__init__.py: skipping itertools Provides: python3(nineml), python3(nineml.abstraction_layer), python3(nineml.abstraction_layer.component), python3(nineml.abstraction_layer.component.component), python3(nineml.abstraction_layer.component.componentqueryer), python3(nineml.abstraction_layer.component.conditions), python3(nineml.abstraction_layer.component.dynamics), python3(nineml.abstraction_layer.component.events), python3(nineml.abstraction_layer.component.expressions), python3(nineml.abstraction_layer.component.interface), python3(nineml.abstraction_layer.component.namespaceaddress), python3(nineml.abstraction_layer.component.parse), python3(nineml.abstraction_layer.component.parse.cond_parse), python3(nineml.abstraction_layer.component.parse.expr_parse), python3(nineml.abstraction_layer.component.ports), python3(nineml.abstraction_layer.component.syntacticsugar), python3(nineml.abstraction_layer.component.util), python3(nineml.abstraction_layer.component_modifiers), python3(nineml.abstraction_layer.component_modifiers.component_modifier), python3(nineml.abstraction_layer.flattening), python3(nineml.abstraction_layer.flattening.flattening), python3(nineml.abstraction_layer.readers), python3(nineml.abstraction_layer.readers.xml_reader), python3(nineml.abstraction_layer.util), python3(nineml.abstraction_layer.validators), python3(nineml.abstraction_layer.validators.base), python3(nineml.abstraction_layer.validators.component_validator), python3(nineml.abstraction_layer.validators.cv_general), python3(nineml.abstraction_layer.validators.cv_namingconflicts), python3(nineml.abstraction_layer.validators.cv_ports), python3(nineml.abstraction_layer.validators.cv_regimenames), python3(nineml.abstraction_layer.validators.cv_types), python3(nineml.abstraction_layer.validators.equality_checker), python3(nineml.abstraction_layer.visitors), python3(nineml.abstraction_layer.visitors.base), python3(nineml.abstraction_layer.visitors.cloner), python3(nineml.abstraction_layer.writers), python3(nineml.abstraction_layer.writers.dot_writer), python3(nineml.abstraction_layer.writers.mod_file_writer), python3(nineml.abstraction_layer.writers.text_writer), python3(nineml.abstraction_layer.writers.xml_writer), python3(nineml.abstraction_layer.xmlns), python3(nineml.exceptions), python3(nineml.exceptions.exceptions), python3(nineml.maths), python3(nineml.user_layer), python3(nineml.utility) Requires: /usr/lib/python3/site-packages, python3(Cheetah.Template) < 0, python3(collections) < 0, python3(functools) < 0, python3(hashlib) < 0, python3(lxml) < 0, python3(lxml.builder) < 0, python3(numpy) < 0, python3(operator) < 0, python3(os) < 0, python3(os.path) < 0, python3(ply.lex) < 0, python3(ply.yacc) < 0, python3(re) < 0, python3(types) < 0, python3(urllib.error) < 0, python3(urllib.parse) < 0, python3(urllib.request) < 0 Processing files: python3-module-9ML-tests-0.1.0-alt4.1.2 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.wZAJpt find-provides: running scripts (alternatives,debuginfo,gir,lib,pam,perl,pkgconfig,python,python3,shell,typelib) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.pag1mu find-requires: running scripts (cpp,debuginfo,files,gir-js,gir-python,gir,lib,pam,perl,pkgconfig,pkgconfiglib,python,python3,rpmlib,shebang,shell,static,symlinks,systemd-services,typelib) /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: line=3 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: line=4 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: line=6 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: line=9 possible relative import from ., UNIMPLEMENTED /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/__init__.py: line=10 possible relative import from ., UNIMPLEMENTED python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: skipping sys /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=10 IGNORE (for REQ=slight and deep=8) module=nineml /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=13 IGNORE (for REQ=slight and deep=8) module=nineml.abstraction_layer.flattening /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=15 IGNORE (for REQ=slight and deep=8) module=pyNN.neuron /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=16 IGNORE (for REQ=slight and deep=8) module=pyNN.neuron.nineml /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=17 IGNORE (for REQ=slight and deep=8) module=pyNN.neuron.nineml /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=19 IGNORE (for REQ=slight and deep=8) module=pyNN.utility /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/simulate_pynn_neuron.py: line=93 IGNORE (for REQ=slight and deep=12) module=pylab python3.req: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: skipping sys /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [274, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]]]]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]]]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [318, [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [319, [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [320, [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [321, [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [322, [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [323, [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 UNABLE to determine the imported name at parse-time: module_name /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=26 a form of __import__ was read which gave no deps: [324, [325, [1, '__import__', 26]], [327, [7, '(', 26], [335, [336, [306, [310, [311, [312, [313, [316, [317, [318, [319, [320, [321, [322, [323, [324, [325, [1, 'module_name', 26]]]]]]]]]]]]]]]]]], [8, ')', 26]]] /usr/lib/rpm/python3.req.py: /usr/src/tmp/python-module-9ML-buildroot/usr/lib/python3/site-packages/nineml/abstraction_layer/testing_utils/testable_component.py: line=94 IGNORE (for REQ=slight and deep=11) module=nineml.abstraction_layer Provides: python3(nineml.abstraction_layer.testing_utils), python3(nineml.abstraction_layer.testing_utils.record_value), python3(nineml.abstraction_layer.testing_utils.simulate_pynn_neuron), python3(nineml.abstraction_layer.testing_utils.test_write_dot), python3(nineml.abstraction_layer.testing_utils.test_xml_write_read_write), python3(nineml.abstraction_layer.testing_utils.testable_component) Requires: python3-module-9ML = 0.1.0-alt4.1.2, /usr/lib/python3/site-packages, python3(collections) < 0, python3(nineml.abstraction_layer) < 0, python3(nineml.exceptions) < 0, python3(nineml.utility) < 0, python3(os) < 0, python3(os.path) < 0 Adding to python-module-9ML-tests a strict dependency on python-module-9ML Adding to python-module-9ML-examples a strict dependency on python-module-9ML Adding to python3-module-9ML-tests a strict dependency on python3-module-9ML Removing 1 extra deps from python-module-9ML-tests due to dependency on python-module-9ML Removing 1 extra deps from python-module-9ML-examples due to dependency on python-module-9ML Removing 3 extra deps from python3-module-9ML-tests due to dependency on python3-module-9ML Removing 2 extra deps from python-module-9ML-tests due to repentancy on python-module-9ML Removing 1 extra deps from python-module-9ML-examples due to repentancy on python-module-9ML Removing 4 extra deps from python3-module-9ML-tests due to repentancy on python3-module-9ML Wrote: /usr/src/RPM/RPMS/noarch/python-module-9ML-0.1.0-alt4.1.2.noarch.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/noarch/python-module-9ML-tests-0.1.0-alt4.1.2.noarch.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/noarch/python-module-9ML-examples-0.1.0-alt4.1.2.noarch.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/noarch/python-module-9ML-pickles-0.1.0-alt4.1.2.noarch.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/noarch/python-module-9ML-docs-0.1.0-alt4.1.2.noarch.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/noarch/python3-module-9ML-0.1.0-alt4.1.2.noarch.rpm (w2.lzdio) Wrote: /usr/src/RPM/RPMS/noarch/python3-module-9ML-tests-0.1.0-alt4.1.2.noarch.rpm (w2.lzdio) 65.90user 6.20system 1:18.96elapsed 91%CPU (0avgtext+0avgdata 44212maxresident)k 0inputs+0outputs (0major+785877minor)pagefaults 0swaps 85.72user 16.55system 1:47.57elapsed 95%CPU (0avgtext+0avgdata 106876maxresident)k 34072inputs+0outputs (0major+1484675minor)pagefaults 0swaps --- python-module-9ML-examples-0.1.0-alt4.1.2.noarch.rpm.repo 2019-04-19 15:25:33.000000000 +0000 +++ python-module-9ML-examples-0.1.0-alt4.1.2.noarch.rpm.hasher 2021-01-18 11:57:22.149585554 +0000 @@ -67,3 +67,3 @@ /usr/lib/python2.7/site-packages/nineml/examples/AL/demos/demo2_poisson_spike_gen.pyo 100644 -Requires: python-base +Requires: python2-base Requires: python2.7(unittest) --- python3-module-9ML-0.1.0-alt4.1.2.noarch.rpm.repo 2019-04-19 15:25:33.000000000 +0000 +++ python3-module-9ML-0.1.0-alt4.1.2.noarch.rpm.hasher 2021-01-18 11:57:22.263581702 +0000 @@ -1,7 +1,7 @@ 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