<86>Apr 1 11:35:23 userdel[3501131]: delete user 'rooter' <86>Apr 1 11:35:23 userdel[3501131]: removed group 'rooter' owned by 'rooter' <86>Apr 1 11:35:23 groupadd[3501140]: group added to /etc/group: name=rooter, GID=675 <86>Apr 1 11:35:23 groupadd[3501140]: group added to /etc/gshadow: name=rooter <86>Apr 1 11:35:23 groupadd[3501140]: new group: name=rooter, GID=675 <86>Apr 1 11:35:23 useradd[3501150]: new user: name=rooter, UID=675, GID=675, home=/root, shell=/bin/bash <86>Apr 1 11:35:23 userdel[3501175]: delete user 'builder' <86>Apr 1 11:35:23 userdel[3501175]: removed group 'builder' owned by 'builder' <86>Apr 1 11:35:23 groupadd[3501187]: group added to /etc/group: name=builder, GID=676 <86>Apr 1 11:35:23 groupadd[3501187]: group added to /etc/gshadow: name=builder <86>Apr 1 11:35:23 groupadd[3501187]: new group: name=builder, GID=676 <86>Apr 1 11:35:23 useradd[3501193]: new user: name=builder, UID=676, GID=676, home=/usr/src, shell=/bin/bash warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found warning: Macro %_altdir not found <13>Apr 1 11:35:26 rpmi: libidn2-2.3.0-alt1 sisyphus+240846.100.1.2 1573870475 installed <13>Apr 1 11:35:26 rpmi: libnl3-3.5.0-alt1 sisyphus+237716.100.1.1 1568781468 installed <13>Apr 1 11:35:26 rpmi: libibverbs-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 1 11:35:26 rpmi: libquadmath0-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 1 11:35:26 rpmi: libgfortran5-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 1 11:35:26 rpmi: udev-rules-1:245.3-alt1 sisyphus+248929.100.1.1 1585589791 installed <13>Apr 1 11:35:26 rpmi: librdmacm-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 1 11:35:26 rpmi: libnuma-2.0.11-alt1 1450022594 installed <13>Apr 1 11:35:26 rpmi: libibumad-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 1 11:35:26 rpmi: libmnl-1.0.4-alt2 sisyphus+220683.100.1.1 1549335457 installed <13>Apr 1 11:35:26 rpmi: gcc-fortran-common-1.4.24-alt3 sisyphus+243033.100.1.1 1576462403 installed <13>Apr 1 11:35:26 rpmi: liblz4-1:1.9.2-alt1 sisyphus+238585.100.2.2 1570066927 installed <13>Apr 1 11:35:26 rpmi: libiptables-1.8.4-alt1 sisyphus+246876.100.1.1 1582593405 installed <13>Apr 1 11:35:26 rpmi: libdevmapper-1.02.169-alt1 sisyphus+246686.100.1.1 1582206110 installed <13>Apr 1 11:35:26 rpmi: msulogin-1.0-alt1 1366288515 installed <13>Apr 1 11:35:26 rpmi: mount-2.33.2-alt1 sisyphus+227076.100.1.1 1555076789 installed <13>Apr 1 11:35:27 rpmi: sysvinit-2.88-alt6 sisyphus+240403.100.2.1 1573520141 installed <13>Apr 1 11:35:27 rpmi: libnetlink-5.5.0-alt1 sisyphus+246875.100.1.1 1582591924 installed <13>Apr 1 11:35:27 rpmi: libibmad-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 1 11:35:27 rpmi: libibnetdisc-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 1 11:35:27 rpmi: libnuma-devel-2.0.11-alt1 1450022594 installed <13>Apr 1 11:35:27 rpmi: libquadmath9-devel-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 1 11:35:27 rpmi: libgfortran9-devel-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 1 11:35:27 rpmi: gcc9-fortran-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 1 11:35:27 rpmi: gcc-fortran-9-alt1 sisyphus+239632.300.3.1 1571788297 installed <13>Apr 1 11:35:27 rpmi: libquadmath8-devel-8.4.1-alt1 sisyphus+247375.200.3.1 1583429415 installed <13>Apr 1 11:35:27 rpmi: libgfortran8-devel-8.4.1-alt1 sisyphus+247375.200.3.1 1583429415 installed <13>Apr 1 11:35:27 rpmi: libsz2-2.1-alt4 1300649104 installed <13>Apr 1 11:35:28 rpmi: zlib-devel-1.2.11-alt1 sisyphus+221902.6000.4.1 1550601058 installed <13>Apr 1 11:35:28 rpmi: tcsh-6.20.00-alt2 1503603381 installed <13>Apr 1 11:35:28 rpmi: rpm-macros-mpi-selector-1.0.3-alt3 1504498675 installed <13>Apr 1 11:35:28 rpmi: mpi-selector-1.0.3-alt3 1504498675 installed <13>Apr 1 11:35:28 rpmi: openmpi-2.0.1-alt8 sisyphus+229856.100.1.1 1558540200 installed <13>Apr 1 11:35:28 rpmi: libpnetcdf-1.8.1-alt2 sisyphus+233636.100.1.1 1562118145 installed <13>Apr 1 11:35:28 rpmi: libpci-3.6.4-alt1 sisyphus+247727.100.1.1 1584020253 installed <13>Apr 1 11:35:28 rpmi: pciids-20200327-alt1 sisyphus+248697.100.1.1 1585350421 installed <13>Apr 1 11:35:28 rpmi: pciutils-3.6.4-alt1 sisyphus+247727.100.1.1 1584020253 installed <13>Apr 1 11:35:28 rpmi: libexpat-2.2.4-alt1 1503305345 installed <13>Apr 1 11:35:28 rpmi: publicsuffix-list-dafsa-20200106-alt1 sisyphus+244007.100.1.1 1578588044 installed <13>Apr 1 11:35:28 rpmi: libpsl-0.21.0-alt2 sisyphus+237083.100.1.1 1567531657 installed <13>Apr 1 11:35:28 rpmi: libnghttp2-1.40.0-alt1 sisyphus+244416.100.1.1 1579241942 installed <13>Apr 1 11:35:28 rpmi: libverto-0.3.0-alt1_7 sisyphus+225932.100.1.1 1553994919 installed <13>Apr 1 11:35:28 rpmi: libkeyutils-1.6-alt2 sisyphus+226520.100.2.1 1554512089 installed <13>Apr 1 11:35:28 rpmi: libcom_err-1.44.6-alt1 sisyphus+224154.100.1.1 1552091678 installed <13>Apr 1 11:35:28 rpmi: libbrotlicommon-1.0.7-alt1 sisyphus+226738.100.2.1 1554554568 installed <13>Apr 1 11:35:28 rpmi: libbrotlidec-1.0.7-alt1 sisyphus+226738.100.2.1 1554554568 installed <13>Apr 1 11:35:28 rpmi: libatm-2.5.1-alt6 sisyphus+234093.100.1.1 1562575889 installed <13>Apr 1 11:35:28 rpmi: chrooted-0.3.10-alt1 sisyphus+247660.200.4.2 1584237901 installed <13>Apr 1 11:35:28 rpmi: chrooted-resolv-0.3.1-alt2 1176155250 installed <13>Apr 1 11:35:28 rpmi: gcc-c++-common-1.4.24-alt3 sisyphus+243033.100.1.1 1576462403 installed <13>Apr 1 11:35:29 rpmi: libstdc++9-devel-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 1 11:35:29 rpmi: gcc9-c++-9.2.1-alt3 sisyphus+245055.100.1.1 1580041617 installed <13>Apr 1 11:35:29 rpmi: gcc-c++-9-alt1 sisyphus+239632.300.3.1 1571788297 installed <13>Apr 1 11:35:30 rpmi: udev-hwdb-1:245.3-alt1 sisyphus+248929.100.1.1 1585589791 installed <13>Apr 1 11:35:30 rpmi: libseccomp-2.4.2-alt2 sisyphus+245295.100.1.1 1580406865 installed <13>Apr 1 11:35:30 rpmi: libpcre2-10.34-alt1 sisyphus+241619.100.1.1 1574686794 installed <13>Apr 1 11:35:30 rpmi: libjson-c4-0.13.1-alt1 sisyphus+226468.100.8.1 1554723266 installed <13>Apr 1 11:35:30 rpmi: libargon2-20190702-alt1 sisyphus+235300.100.1.1 1564606540 installed <13>Apr 1 11:35:30 rpmi: libgpg-error-1.36-alt1 sisyphus+225621.300.1.1 1553521082 installed <13>Apr 1 11:35:30 rpmi: libgcrypt20-1.8.5-alt3 sisyphus+239622.100.1.1 1571746654 installed <13>Apr 1 11:35:30 rpmi: libsystemd-1:245.3-alt1 sisyphus+248929.100.1.1 1585589833 installed <13>Apr 1 11:35:30 rpmi: hwclock-1:2.33.2-alt1 sisyphus+227076.100.1.1 1555076789 installed <13>Apr 1 11:35:30 rpmi: hashalot-0.3-alt1.qa1 1366323553 installed <13>Apr 1 11:35:30 rpmi: losetup-2.33.2-alt1 sisyphus+227076.100.1.1 1555076789 installed <13>Apr 1 11:35:30 rpmi: lsblk-2.33.2-alt1 sisyphus+227076.100.1.1 1555076789 installed <13>Apr 1 11:35:30 rpmi: libp11-kit-0.23.15-alt1 sisyphus+226408.100.2.1 1554288204 installed <13>Apr 1 11:35:30 rpmi: libtasn1-4.16.0-alt1 sisyphus+245480.100.1.1 1580825062 installed <13>Apr 1 11:35:30 rpmi: bc-1:1.07.1-alt1 sisyphus+221902.700.4.1 1550587857 installed <13>Apr 1 11:35:30 rpmi: rpm-macros-alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Apr 1 11:35:30 rpmi: alternatives-0.5.1-alt1 sisyphus+226946.100.1.1 1554830426 installed <13>Apr 1 11:35:30 rpmi: libhdf5-8-mpi-1.8.13-alt4 sisyphus+223496.100.1.1 1551620849 installed <13>Apr 1 11:35:30 rpmi: ca-certificates-2020.01.23-alt1 sisyphus+244791.300.2.1 1580285500 installed <13>Apr 1 11:35:30 rpmi: ca-trust-0.1.2-alt1 sisyphus+233348.100.1.1 1561653823 installed <13>Apr 1 11:35:30 rpmi: p11-kit-trust-0.23.15-alt1 sisyphus+226408.100.2.1 1554288204 installed <13>Apr 1 11:35:30 rpmi: libcrypto1.1-1.1.1d-alt1.1 sisyphus+237931.100.2.1 1569235729 installed <13>Apr 1 11:35:30 rpmi: libkmod-26-alt1 sisyphus+226359.100.1.1 1554129990 installed <13>Apr 1 11:35:30 rpmi: libssl1.1-1.1.1d-alt1.1 sisyphus+237931.100.2.1 1569235729 installed <86>Apr 1 11:35:30 groupadd[3509379]: group added to /etc/group: name=_keytab, GID=499 <86>Apr 1 11:35:30 groupadd[3509379]: group added to /etc/gshadow: name=_keytab <86>Apr 1 11:35:30 groupadd[3509379]: new group: name=_keytab, GID=499 <13>Apr 1 11:35:30 rpmi: libkrb5-1.17.1-alt1 sisyphus+242784.100.1.1 1576137330 installed <13>Apr 1 11:35:30 rpmi: kmod-26-alt1 sisyphus+226359.100.1.1 1554129990 installed <86>Apr 1 11:35:30 groupadd[3509506]: group added to /etc/group: name=sasl, GID=498 <86>Apr 1 11:35:30 groupadd[3509506]: group added to /etc/gshadow: name=sasl <86>Apr 1 11:35:30 groupadd[3509506]: new group: name=sasl, GID=498 <13>Apr 1 11:35:30 rpmi: libsasl2-3-2.1.27-alt2 sisyphus+228101.100.1.1 1556139863 installed <13>Apr 1 11:35:30 rpmi: libldap-2.4.48-alt3 sisyphus+238816.100.1.1 1570449022 installed <13>Apr 1 11:35:30 rpmi: libcurl-7.69.1-alt1 sisyphus+247613.100.1.1 1583913910 installed <13>Apr 1 11:35:30 rpmi: libnetcdf11-mpi-4.4.1.1-alt2 sisyphus+238557.100.1.1 1570026012 installed <13>Apr 1 11:35:30 rpmi: libcryptsetup-2.2.2-alt1 sisyphus+242851.300.2.1 1576248426 installed <13>Apr 1 11:35:30 rpmi: startup-0.9.9.9-alt1 sisyphus+242122.100.1.1 1575282386 installed <13>Apr 1 11:35:30 rpmi: systemd-utils-1:245.3-alt1 sisyphus+248929.100.1.1 1585589833 installed <13>Apr 1 11:35:31 rpmi: dmsetup-1.02.169-alt1 sisyphus+246686.100.1.1 1582206110 installed <86>Apr 1 11:35:31 groupadd[3509760]: group added to /etc/group: name=tape, GID=497 <86>Apr 1 11:35:31 groupadd[3509760]: group added to /etc/gshadow: name=tape <86>Apr 1 11:35:31 groupadd[3509760]: new group: name=tape, GID=497 <86>Apr 1 11:35:31 groupadd[3509770]: group added to /etc/group: name=dialout, GID=496 <86>Apr 1 11:35:31 groupadd[3509770]: group added to /etc/gshadow: name=dialout <86>Apr 1 11:35:31 groupadd[3509770]: new group: name=dialout, GID=496 <86>Apr 1 11:35:31 groupadd[3509779]: group added to /etc/group: name=input, GID=495 <86>Apr 1 11:35:31 groupadd[3509779]: group added to /etc/gshadow: name=input <86>Apr 1 11:35:31 groupadd[3509779]: new group: name=input, GID=495 <86>Apr 1 11:35:31 groupadd[3509784]: group added to /etc/group: name=video, GID=494 <86>Apr 1 11:35:31 groupadd[3509784]: group added to /etc/gshadow: name=video <86>Apr 1 11:35:31 groupadd[3509784]: new group: name=video, GID=494 <86>Apr 1 11:35:31 groupadd[3509792]: group added to /etc/group: name=render, GID=493 <86>Apr 1 11:35:31 groupadd[3509792]: group added to /etc/gshadow: name=render <86>Apr 1 11:35:31 groupadd[3509792]: new group: name=render, GID=493 <13>Apr 1 11:35:31 rpmi: udev-1:245.3-alt1 sisyphus+248929.100.1.1 1585589833 installed <86>Apr 1 11:35:31 groupadd[3509863]: group added to /etc/group: name=iputils, GID=492 <86>Apr 1 11:35:31 groupadd[3509863]: group added to /etc/gshadow: name=iputils <86>Apr 1 11:35:31 groupadd[3509863]: new group: name=iputils, GID=492 <86>Apr 1 11:35:31 useradd[3509868]: new user: name=iputils, UID=499, GID=492, home=/dev/null, shell=/dev/null <86>Apr 1 11:35:31 groupadd[3509876]: group added to /etc/group: name=netadmin, GID=491 <86>Apr 1 11:35:31 groupadd[3509876]: group added to /etc/gshadow: name=netadmin <86>Apr 1 11:35:31 groupadd[3509876]: new group: name=netadmin, GID=491 <13>Apr 1 11:35:31 rpmi: iputils-20190709-alt2 sisyphus+241803.100.2.1 1575176404 installed sysctl: cannot stat /proc/sys/net/ipv4/ping_group_range: No such file or directory <13>Apr 1 11:35:31 rpmi: iproute2-5.5.0-alt1 sisyphus+246875.100.1.1 1582591924 installed <13>Apr 1 11:35:31 rpmi: rdma-core-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 1 11:35:31 rpmi: ibacm-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 1 11:35:31 rpmi: rdma-core-devel-28.0-alt1 sisyphus+246750.100.1.1 1582248715 installed <13>Apr 1 11:35:31 rpmi: openmpi-devel-2.0.1-alt8 sisyphus+229856.100.1.1 1558540200 installed <13>Apr 1 11:35:31 rpmi: libhdf5-mpi-devel-1.8.13-alt4 sisyphus+223496.100.1.1 1551620849 installed <13>Apr 1 11:35:31 rpmi: libnetcdf-mpi-devel-4.4.1.1-alt2 sisyphus+238557.100.1.1 1570026012 installed <13>Apr 1 11:35:31 rpmi: libcurl-devel-7.69.1-alt1 sisyphus+247613.100.1.1 1583913910 installed <13>Apr 1 11:35:31 rpmi: libexpat-devel-2.2.4-alt1 1503305345 installed <13>Apr 1 11:35:31 rpmi: flex-2.6.4.0.88.9801-alt1 sisyphus+221902.2300.4.1 1550596430 installed Building target platforms: i586 Building for target i586 Wrote: /usr/src/in/nosrpm/libnetcdf_c++4-1-mpi-4.3.0-alt1.nosrc.rpm Installing libnetcdf_c++4-1-mpi-4.3.0-alt1.src.rpm Building target platforms: i586 Building for target i586 Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.94093 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + rm -rf libnetcdf_c++4-1-mpi-4.3.0 + echo 'Source #0 (libnetcdf_c++4-1-mpi-4.3.0.tar):' Source #0 (libnetcdf_c++4-1-mpi-4.3.0.tar): + /bin/tar -xf /usr/src/RPM/SOURCES/libnetcdf_c++4-1-mpi-4.3.0.tar + cd libnetcdf_c++4-1-mpi-4.3.0 + /bin/chmod -c -Rf u+rwX,go-w . + echo 'Patch #1 (netcdf-cxx4-4.3.0-alt-build.patch):' Patch #1 (netcdf-cxx4-4.3.0-alt-build.patch): + /usr/bin/patch -p2 patching file ncxx4-config.in Hunk #1 succeeded at 3 with fuzz 2. Hunk #2 succeeded at 11 with fuzz 2. patching file netcdf-cxx4.pc.in + sed -i 's|@LIBDIR@|/usr/lib|' netcdf-cxx4.pc.in ncxx4-config.in + exit 0 Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.94093 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdf_c++4-1-mpi-4.3.0 + mpi-selector --set openmpi + source /usr/lib/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib/openmpi/bin ++ PATH=/usr/lib/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib/openmpi/man ++ MANPATH=/usr/lib/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib' + autoreconf -fisv autoreconf-default: Entering directory `.' autoreconf-default: configure.ac: not using Gettext autoreconf-default: running: aclocal --force -I m4 autoreconf-default: configure.ac: tracing autoreconf-default: running: libtoolize --force --install libtoolize-default: putting auxiliary files in '.'. libtoolize-default: linking file './config.guess' libtoolize-default: linking file './config.sub' libtoolize-default: linking file './install-sh' libtoolize-default: linking file './ltmain.sh' libtoolize-default: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize-default: linking file 'm4/libtool.m4' libtoolize-default: linking file 'm4/ltoptions.m4' libtoolize-default: linking file 'm4/ltsugar.m4' libtoolize-default: linking file 'm4/ltversion.m4' libtoolize-default: linking file 'm4/lt~obsolete.m4' autoreconf-default: configure.ac: not using Intltool autoreconf-default: configure.ac: not using gtk-doc autoreconf-default: running: /usr/bin/autoconf-2.60 --force autoreconf-default: running: /usr/bin/autoheader-2.60 --force autoreconf-default: running: automake --add-missing --force-missing configure.ac:153: installing './compile' configure.ac:26: installing './missing' cxx4/Makefile.am: installing './depcomp' autoreconf-default: Leaving directory `.' + CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export CFLAGS + CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export CXXFLAGS + FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' + export FFLAGS + '[' -n '' ']' ++ printf %s '-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC' ++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g' + ASFLAGS=' -march=i586 -mtune=generic' + export ASFLAGS + export lt_cv_deplibs_check_method=pass_all + lt_cv_deplibs_check_method=pass_all + readlink -e -- ./configure + xargs -ri dirname -- '{}' + xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n' + sort -u + xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess + ./configure --build=i586-alt-linux --host=i586-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --disable-silent-rules --without-included-gettext --enable-shared --enable-static=no --bindir=/usr/lib/openmpi/bin --libdir=/usr/lib/openmpi/lib --includedir=/usr/lib/openmpi/include configure: WARNING: unrecognized options: --without-included-gettext configure: netCDF-cxx4 4.3.0 checking build system type... i586-alt-linux-gnu checking host system type... i586-alt-linux-gnu checking target system type... i586-alt-linux-gnu checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether netCDF extra tests should be run (developers only)... no checking whether large file (> 2GB) tests should be run... no checking whether benchmaks should be run (experimental)... no checking where to put large temp files if large file tests are run... . checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... no configure: WARNING: dot not found - will use simple charts in documentation configure: finding other utilities configure: setting up libtool checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for i586-alt-linux-gcc... i586-alt-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether i586-alt-linux-gcc accepts -g... yes checking for i586-alt-linux-gcc option to accept ISO C89... none needed checking whether i586-alt-linux-gcc understands -c and -o together... yes checking dependency style of i586-alt-linux-gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by i586-alt-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i586-alt-linux-gnu file names to i586-alt-linux-gnu format... func_convert_file_noop checking how to convert i586-alt-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for i586-alt-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... (cached) pass_all checking for i586-alt-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for i586-alt-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for i586-alt-linux-strip... no checking for strip... strip checking for i586-alt-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from i586-alt-linux-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for i586-alt-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... i586-alt-linux-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if i586-alt-linux-gcc supports -fno-rtti -fno-exceptions... no checking for i586-alt-linux-gcc option to produce PIC... -fPIC -DPIC checking if i586-alt-linux-gcc PIC flag -fPIC -DPIC works... yes checking if i586-alt-linux-gcc static flag -static works... no checking if i586-alt-linux-gcc supports -c -o file.o... yes checking if i586-alt-linux-gcc supports -c -o file.o... (cached) yes checking whether the i586-alt-linux-gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for i586-alt-linux-g++... i586-alt-linux-g++ checking whether we are using the GNU C++ compiler... yes checking whether i586-alt-linux-g++ accepts -g... yes checking dependency style of i586-alt-linux-g++... none checking how to run the C++ preprocessor... i586-alt-linux-g++ -E checking for ld used by i586-alt-linux-g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the i586-alt-linux-g++ linker (/usr/bin/ld) supports shared libraries... yes checking for i586-alt-linux-g++ option to produce PIC... -fPIC -DPIC checking if i586-alt-linux-g++ PIC flag -fPIC -DPIC works... yes checking if i586-alt-linux-g++ static flag -static works... no checking if i586-alt-linux-g++ supports -c -o file.o... yes checking if i586-alt-linux-g++ supports -c -o file.o... (cached) yes checking whether the i586-alt-linux-g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for i586-alt-linux-gcc... (cached) i586-alt-linux-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether i586-alt-linux-gcc accepts -g... (cached) yes checking for i586-alt-linux-gcc option to accept ISO C89... (cached) none needed checking whether i586-alt-linux-gcc understands -c and -o together... (cached) yes checking dependency style of i586-alt-linux-gcc... (cached) none checking how to run the C preprocessor... i586-alt-linux-gcc -E checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking for ptrdiff_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... 64 checking netcdf.h usability... yes checking netcdf.h presence... no configure: WARNING: netcdf.h: accepted by the compiler, rejected by the preprocessor! configure: WARNING: netcdf.h: proceeding with the compiler's result checking for netcdf.h... yes checking for library containing nc_create... -lnetcdf checking for nc_def_opaque... yes checking for nccreate... yes checking for nc_set_log_level... no checking for oc_open... yes checking for nc_use_parallel_enabled... yes checking netCDF v2 API present... yes checking netCDF-4 present... yes configure: generating header files and makefiles checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating cxx4/Makefile config.status: creating examples/Makefile config.status: creating docs/Makefile config.status: creating ncxx4-config config.status: creating netcdf-cxx4.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --without-included-gettext + make -j8 make all-recursive Making all in cxx4 make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncDim.lo ncDim.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncDim.cpp -fPIC -DPIC -o .libs/ncDim.o In file included from ncDim.cpp:2: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncCheck.lo ncCheck.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncCheck.cpp -fPIC -DPIC -o .libs/ncCheck.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncAtt.lo ncAtt.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncAtt.cpp -fPIC -DPIC -o .libs/ncAtt.o In file included from ncAtt.cpp:2: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncOpaqueType.lo ncOpaqueType.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncOpaqueType.cpp -fPIC -DPIC -o .libs/ncOpaqueType.o In file included from ncOpaqueType.cpp:2: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncFile.lo ncFile.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncFile.cpp -fPIC -DPIC -o .libs/ncFile.o In file included from ncFile.h:2, from ncFile.cpp:1: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ ncFile.cpp: In member function 'void netCDF::NcFile::open(const string&, netCDF::NcFile::FileMode, netCDF::NcFile::FileFormat)': ncFile.cpp:117:14: warning: 'format' may be used uninitialized in this function [-Wmaybe-uninitialized] 117 | ncCheck(nc_create(filePath.c_str(), format | NC_CLOBBER, &myId),__FILE__,__LINE__); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncEnumType.lo ncEnumType.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncEnumType.cpp -fPIC -DPIC -o .libs/ncEnumType.o In file included from ncEnumType.cpp:2: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncVlenType.lo ncVlenType.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncVlenType.cpp -fPIC -DPIC -o .libs/ncVlenType.o In file included from ncVlenType.cpp:2: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncCompoundType.lo ncCompoundType.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncCompoundType.cpp -fPIC -DPIC -o .libs/ncCompoundType.o In file included from ncCompoundType.cpp:1: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncByte.lo ncByte.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncByte.cpp -fPIC -DPIC -o .libs/ncByte.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncGroupAtt.lo ncGroupAtt.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncGroupAtt.cpp -fPIC -DPIC -o .libs/ncGroupAtt.o In file included from ncGroupAtt.cpp:2: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncChar.lo ncChar.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncChar.cpp -fPIC -DPIC -o .libs/ncChar.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncGroup.lo ncGroup.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncGroup.cpp -fPIC -DPIC -o .libs/ncGroup.o In file included from ncGroup.cpp:1: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory 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.libs/ncType.o In file included from ncType.cpp:3: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncDouble.lo ncDouble.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncDouble.cpp -fPIC -DPIC -o .libs/ncDouble.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory 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-o .libs/ncUint64.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncInt64.lo ncInt64.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncInt64.cpp -fPIC -DPIC -o .libs/ncInt64.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe 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used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncUbyte.lo ncUbyte.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncUbyte.cpp -fPIC -DPIC -o .libs/ncUbyte.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncException.lo ncException.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncException.cpp -fPIC -DPIC -o .libs/ncException.o make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o ncVar.lo ncVar.cpp libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncVar.cpp -fPIC -DPIC -o .libs/ncVar.o In file included from ncVar.h:8, from ncVar.cpp:3: ncGroup.h:18:14: warning: 'netCDF::file_id' defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/sh ../libtool --tag=CXX --mode=link i586-alt-linux-g++ -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -version-info 1:3:0 -o libnetcdf_c++4.la -rpath /usr/lib/openmpi/lib ncAtt.lo ncCheck.lo ncCompoundType.lo ncDim.lo ncEnumType.lo ncException.lo ncFile.lo ncGroup.lo ncGroupAtt.lo ncOpaqueType.lo ncType.lo ncVar.lo ncVarAtt.lo ncVlenType.lo ncByte.lo ncChar.lo ncShort.lo ncInt.lo ncFloat.lo ncDouble.lo ncUbyte.lo ncUshort.lo ncUint.lo ncInt64.lo ncUint64.lo ncString.lo -lnetcdf libtool: link: i586-alt-linux-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/i586-alt-linux/9/../../../crti.o /usr/lib/gcc/i586-alt-linux/9/crtbeginS.o .libs/ncAtt.o .libs/ncCheck.o .libs/ncCompoundType.o .libs/ncDim.o .libs/ncEnumType.o .libs/ncException.o .libs/ncFile.o .libs/ncGroup.o .libs/ncGroupAtt.o .libs/ncOpaqueType.o .libs/ncType.o .libs/ncVar.o .libs/ncVarAtt.o .libs/ncVlenType.o .libs/ncByte.o .libs/ncChar.o .libs/ncShort.o .libs/ncInt.o .libs/ncFloat.o .libs/ncDouble.o .libs/ncUbyte.o .libs/ncUshort.o .libs/ncUint.o .libs/ncInt64.o .libs/ncUint64.o .libs/ncString.o -lnetcdf -L/usr/lib/gcc/i586-alt-linux/9 -L/usr/lib/gcc/i586-alt-linux/9/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/i586-alt-linux/9/crtendS.o /usr/lib/gcc/i586-alt-linux/9/../../../crtn.o -g -O2 -march=i586 -mtune=generic -Wl,-soname -Wl,libnetcdf_c++4.so.1 -o .libs/libnetcdf_c++4.so.1.0.3 libtool: link: (cd ".libs" && rm -f "libnetcdf_c++4.so.1" && ln -s "libnetcdf_c++4.so.1.0.3" "libnetcdf_c++4.so.1") libtool: link: (cd ".libs" && rm -f "libnetcdf_c++4.so" && ln -s "libnetcdf_c++4.so.1.0.3" "libnetcdf_c++4.so") libtool: link: ( cd ".libs" && rm -f "libnetcdf_c++4.la" && ln -s "../libnetcdf_c++4.la" "libnetcdf_c++4.la" ) make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' Making all in examples make[2]: Nothing to be done for 'all'. Making all in docs make[2]: Nothing to be done for 'all'. + exit 0 Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.33630 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + /bin/chmod -Rf u+rwX -- /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot + : + /bin/rm -rf -- /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot + cd libnetcdf_c++4-1-mpi-4.3.0 + source /usr/lib/openmpi/bin/mpivars.sh ++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ grep -q /usr/lib/openmpi/bin ++ PATH=/usr/lib/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games ++ export PATH ++ echo ++ grep -q /usr/lib/openmpi/lib ++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib ++ export LD_LIBRARY_PATH ++ echo ++ grep -q /usr/lib/openmpi/man ++ MANPATH=/usr/lib/openmpi/man: ++ export MANPATH + export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib' + OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib' + make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot make: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' Making install in cxx4 make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' /bin/mkdir -p '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib' /bin/sh ../libtool --mode=install /bin/install -p libnetcdf_c++4.la '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib' libtool: install: /bin/install -p .libs/libnetcdf_c++4.so.1.0.3 /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib/libnetcdf_c++4.so.1.0.3 libtool: install: (cd /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib && { ln -s -f libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so.1 || { rm -f libnetcdf_c++4.so.1 && ln -s libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so.1; }; }) libtool: install: (cd /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib && { ln -s -f libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so || { rm -f libnetcdf_c++4.so && ln -s libnetcdf_c++4.so.1.0.3 libnetcdf_c++4.so; }; }) libtool: install: /bin/install -p .libs/libnetcdf_c++4.lai /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib/libnetcdf_c++4.la libtool: warning: remember to run 'libtool --finish /usr/lib/openmpi/lib' /bin/mkdir -p '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include' /bin/install -p -m 644 netcdf ncAtt.h ncCheck.h ncDim.h ncException.h ncGroup.h ncOpaqueType.h ncVar.h ncVlenType.h ncCompoundType.h ncEnumType.h ncFile.h ncGroupAtt.h ncType.h ncVarAtt.h ncByte.h ncChar.h ncShort.h ncInt.h ncFloat.h ncDouble.h ncUbyte.h ncUshort.h ncUint.h ncInt64.h ncUint64.h ncString.h '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/cxx4' Making install in examples make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/examples' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/examples' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/examples' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/examples' Making install in docs make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/docs' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/docs' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/docs' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0/docs' make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' /bin/mkdir -p '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/bin' /bin/install -p ncxx4-config '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/bin' /bin/mkdir -p '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib/pkgconfig' /bin/install -p -m 644 netcdf-cxx4.pc '/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib/pkgconfig' make install-data-hook make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' +-------------------------------------------------------------+ | Congratulations! You have successfully installed the | | new netCDF-4 C++ Library | | | | CAUTION: | | | | If you have not already run "make check", then we strongly | | recommend you do so. It does not take very long. | | | | Before using netCDF to store important data, test your | | build with "make check". | | | | If any tests fail, please see the netCDF web site: | | http://www.unidata.ucar.edu/software/netcdf/ | | | | NetCDF is developed and maintained at the Unidata Program | | Center. Unidata provides a broad array of data and software | | tools for use in geoscience education and research. | | http://www.unidata.ucar.edu | +-------------------------------------------------------------+ make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' make: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0' + mv /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf.tmp + install -d /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf + mv /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncAtt.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncByte.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncChar.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncCheck.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncCompoundType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncDim.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncDouble.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncEnumType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncException.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncFile.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncFloat.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncGroup.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncGroupAtt.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncInt.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncInt64.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncOpaqueType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncShort.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncString.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncUbyte.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncUint.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncUint64.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncUshort.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncVar.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncVarAtt.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/ncVlenType.h /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf.tmp /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf/ + mv /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf/netcdf.tmp /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf/netcdf + rm -f /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib/libnetcdf_c++4.la + install -d /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/etc/alternatives/packages.d + mkdir -p /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib + pushd /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib ~/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/lib ~/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0 + for i in libnetcdf_c++4.so.* + ln -s ../../usr/lib/openmpi/lib/libnetcdf_c++4.so.1 /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/ + echo '/usr/lib/libnetcdf_c++4.so.1 /usr/lib/openmpi/lib/libnetcdf_c++4.so.1 30' + for i in libnetcdf_c++4.so.* + ln -s ../../usr/lib/openmpi/lib/libnetcdf_c++4.so.1.0.3 /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/ + echo '/usr/lib/libnetcdf_c++4.so.1.0.3 /usr/lib/openmpi/lib/libnetcdf_c++4.so.1.0.3 30' ++ ls libnetcdf_c++4.so + for i in $(ls *.so) + echo '/usr/lib/libnetcdf_c++4.so /usr/lib/openmpi/lib/libnetcdf_c++4.so 30' + echo '/usr/bin/ncxx4-config /usr/lib/openmpi/bin/ncxx4-config 30' + echo '/usr/lib/pkgconfig/netcdf-cxx4.pc /usr/lib/openmpi/lib/pkgconfig/netcdf-cxx4.pc 30' + popd ~/RPM/BUILD/libnetcdf_c++4-1-mpi-4.3.0 + /usr/lib/rpm/brp-alt Cleaning files in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot (auto) mode of './usr/lib/openmpi/lib/libnetcdf_c++4.so.1.0.3' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--) Verifying and fixing files in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot (binconfig,pkgconfig,libtool,desktop) Checking contents of files in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/ (default) Compressing files in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot (auto) Adjusting library links in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot ./usr/lib: ./usr/lib/openmpi/lib: libnetcdf_c++4.so.1 -> libnetcdf_c++4.so.1.0.3 Verifying ELF objects in /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal) Hardlinking identical .pyc and .pyo files Processing files: libnetcdf_c++4-1-mpi-4.3.0-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.26371 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdf_c++4-1-mpi-4.3.0 + DOCDIR=/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + export DOCDIR + rm -rf /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + /bin/mkdir -p /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + cp -prL COPYRIGHT /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + chmod -R go-w /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + chmod -R a+rX /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-1-mpi-4.3.0 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.FxV4Ic find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) lib.prov: /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/libnetcdf_c++4.so.1: 1082 symbols, 21 bpp Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.GcymKe find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services) Provides: libnetcdf_c++4-mpi = 4.3.0-alt1, libnetcdf_c++4-1-mpi = 4.3.0-alt1, /usr/lib/libnetcdf_c++4.so.1 = 30, /usr/lib/libnetcdf_c++4.so.1.0.3 = 30, libnetcdf_c++4.so.1 = set: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 Requires: libhdf5-8-mpi, libnetcdf11-mpi, /etc/alternatives/packages.d, libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.4), libgcc_s.so.1(GCC_3.0), libnetcdf.so.11 >= set:ogmocQuPmxFdGaK7RJh4WaNsWmOfAmlh55i7ye5iJEbV6uQXObR2uIZb628eauTOTts9INtw5N6wJTSrclpSJYjo6FlwdVdZxrzhQAFGOjAMzNQdxbCiJ9eaLhnOgZkcYRELPWxzoWCzHYOENF9JNSfh8q8mRuYTrNY2NoCm3fn1TEBmMAAGtPrpmWebdO2117sqizdR5UJFWmtk7Sm0q2EqXglIYJgHko1GCFrKMrywcSZK0qwykFyWVCqhpcgZsSw6LYvugJvwZHRkZIDXzpP27HZ2GpxTgKnSftjcdCou1bSm8DYp8VZGs0ezYkz6kZhxCFqSeqCDbafUSspXIViMsJCLdZjCQJOJDr5t2cQoxmpUeO7ngNH11o6ytd54HaGpINRoVoUjEj9xndLK4DVdHMEcNApBJs9SkX6fj9KBGUJwI6SwjYhLfQDg1S75gZiVDLeivD0JoOavNsIFxprkW3R516CWe4Bt4DuL3wOrspHKX56epXDDuNazkseiaLr3ZcHDCZpuysq75uEGp3cdiQmfV8Yw8Aa9hn2eZtAnXWYNFz6lAQowTE2, libstdc++.so.6(CXXABI_1.3), libstdc++.so.6(CXXABI_1.3.9), libstdc++.so.6(GLIBCXX_3.4), libstdc++.so.6(GLIBCXX_3.4.21), rtld(GNU_HASH) Requires(rpmlib): rpmlib(SetVersions) Requires(post): alternatives Requires(preun): alternatives Conflicts: libnetcdf_c++4 < 4.0.1-alt6, libnetcdf_c++4-1-mpi < 4.3.0-alt1 Obsoletes: libnetcdf_c++4-1-mpi < 4.3.0-alt1 Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.ySlW7d Creating libnetcdf_c++4-1-mpi-debuginfo package Processing files: libnetcdf_c++4-mpi-devel-4.3.0-alt1 Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.89665 + umask 022 + /bin/mkdir -p /usr/src/RPM/BUILD + cd /usr/src/RPM/BUILD + cd libnetcdf_c++4-1-mpi-4.3.0 + DOCDIR=/usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + export DOCDIR + rm -rf /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + /bin/mkdir -p /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + cp -prL examples /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + chmod -R go-w /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + chmod -R a+rX /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/share/doc/libnetcdf_c++4-mpi-devel-4.3.0 + exit 0 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.K3aMdf find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.YN65ff find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks,systemd-services) In file included from /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf/ncAtt.h:1: /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf/ncType.h:1:10: fatal error: string: No such file or directory 1 | #include | ^~~~~~~~ compilation terminated. cpp.req: /usr/src/tmp/libnetcdf_c++4-1-mpi-buildroot/usr/lib/openmpi/include/netcdf/ncAtt.h: cpp failed, trying c++ mode find-requires: FINDPACKAGE-COMMANDS: cat Provides: /usr/bin/ncxx4-config = 30, /usr/lib/libnetcdf_c++4.so = 30, /usr/lib/pkgconfig/netcdf-cxx4.pc = 30 Requires: libnetcdf_c++4-1-mpi = 4.3.0-alt1, libnetcdf-mpi-devel, /bin/sh, /etc/alternatives/packages.d, /usr/lib/openmpi/lib/libnetcdf_c++4.so.1.0.3, coreutils Requires(post): alternatives Requires(preun): alternatives Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.2ugYmf Processing files: libnetcdf_c++4-1-mpi-debuginfo-4.3.0-alt1 Finding Provides (using /usr/lib/rpm/find-provides) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.bM741b find-provides: running scripts (debuginfo) Finding Requires (using /usr/lib/rpm/find-requires) Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.prxlId find-requires: running scripts (debuginfo) Provides: debug(libnetcdf_c++4.so.1) Requires: libnetcdf_c++4-1-mpi = 4.3.0-alt1, debug(libc.so.6), debug(libgcc_s.so.1), debug(libnetcdf.so.11), debug(libstdc++.so.6) Removing 1 extra deps from libnetcdf_c++4-mpi-devel due to dependency on libnetcdf_c++4-1-mpi Removing 2 extra deps from libnetcdf_c++4-mpi-devel due to repentancy on libnetcdf_c++4-1-mpi Wrote: /usr/src/RPM/RPMS/i586/libnetcdf_c++4-1-mpi-4.3.0-alt1.i586.rpm Wrote: /usr/src/RPM/RPMS/i586/libnetcdf_c++4-mpi-devel-4.3.0-alt1.i586.rpm Wrote: /usr/src/RPM/RPMS/i586/libnetcdf_c++4-1-mpi-debuginfo-4.3.0-alt1.i586.rpm 28.58user 4.56system 0:31.39elapsed 105%CPU (0avgtext+0avgdata 139640maxresident)k 0inputs+0outputs (0major+1713034minor)pagefaults 0swaps 37.91user 8.51system 0:46.12elapsed 100%CPU (0avgtext+0avgdata 139640maxresident)k 5264inputs+0outputs (0major+2213275minor)pagefaults 0swaps --- libnetcdf_c++4-1-mpi-4.3.0-alt1.i586.rpm.repo 2017-08-29 12:16:55.000000000 +0000 +++ libnetcdf_c++4-1-mpi-4.3.0-alt1.i586.rpm.hasher 2020-04-01 11:36:07.491356091 +0000 @@ -27,3 +27,3 @@ Provides: /usr/lib/libnetcdf_c++4.so.1.0.3 = 30 -Provides: libnetcdf_c++4.so.1 = set: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 +Provides: libnetcdf_c++4.so.1 = set:odzT1cUmYKt6MN0EQ9N39eHe2I9eUHmqXm8f66q5zwIx7NM02EJ70hwM4g4iaAX1raBOeQnyAZj5T3VnsE5lZgYQJvtUxiKKWy3hzZHL2u2HcZiEI6PxoFsh2R4WjQpZhEZdZqKwrjBO6i699goqVsZ0mePkP9Hk0k3qFDCHA9Zel6qf0h5uVnTJ5bq5slQVQM0Y0YgkZ69wkaqrsMvpFd13HbCTljq0COAQwy1vrcjOdtXqGBiFjCzwaUb4mDAoJYXwCQ8yzJJHf3wZ6xmIZhhIxpXC0NJuLioQL4PetqOfZFQ7qOwocE0YvNN8lce0pMDXco3XRi7xVPsaaRhQktZg1fJZeYdaoIn01Qr4elnZB65U1UPjlZBccnFcMHWa3gb4YAEByJWZiBBM2pokeYRcoNcNmUIC4JvQYqwEu23iZmX42OZ8h5Z4uP5Yk2x1FDOZBfdOgyCCuNlITkVsir27oHgQ4sPICkYSm0palHGhK7ZnKvc2fMSvfuSaCtqk3ObQ1xec0LuW8nd0K2rknha1MZcKMXNM2OqhH9kHNbr311izPcMQUr8XxI0fTqrZmbQdGCIgBtoHw6ZcIiCC7ECh0PEEHjPm3FpOy686rbWnTtbw05IA9999dNy5i0hWBuOB6I00IHxbz05Dsj2vomKuZmR3cGJWr2ZnxONtAuVM3XVu0VXd8o8cC0r5rCqAFi57QtZ7OjwnlsHxjAA8KVcFlZ9snZe19NqHST4kMGP5dzfNef8DTOyGof0R672zmhzRzVerRJR0xMHWOEnTsK8PnMAm0Buu3wOhJwkhpRxs8depf09BrD21WZs84G26M06DwRRX8aMb0VqI6V5uZoVerhScDw8jtjyYdYJMLhsAgtzsZsY6vdIm1jcxJuH1582oHzxGVIx2E2MaE5jnSdZERk914LHwCFwcU02TSaDm97B0vKmNJcZdN7os1IZpAq9GChTH10MGwOMsigavzoDNcZuWwxnIohl38LZnNhSZnydhVyIMViGHBSJQepBLKXmWHoZjEGZp9xbzsJvG9HMYjRz2UM07lSQID9BbXZvY2JdP1DUceKn6bCoCVuIxoHEpB9AfJZkEerGheHm6m7sHVDJdVUjHjqEQbKniZvkyax5dIAso8UJwCl3t9Vn1f7ftfzVh0l03DgKdegEZJkCqPWnrxooc64cQWVJnUNLyS9I0M4jq3pdMNxo1GF0Uf2P00gnAZhMLTwpvx5eeKao07VAMsxn6jzY41GDbx6ZuQWx7wc0tnF2KgzakjaCipYx54g9Ca5U7pNfVZxs3hbLKUmSKjV0oWg70XhoKyGBZ0C2ZBIj1DOdFluM38lZtKM2gCkdgm4UEpF3kswKJaLQG6BTiZcwSIZ1pRHYgaMRyFlHPifvZgyUcHn6Vm4o97xH9Jqvzr8os0YDwRhi466Be07j6Of18Yunsqgz20JLVQYPqXoR4coot3VLI7OOUZKysh01wCIkJrwq3ZbDbta09oUcoegCM1r7jXywjZdOvxNvypM1wukq6x8xah6cTljarwrCaZwO3Yn1acta0LNZvq23ZegxPBkiAWwSj0OX23OINvMsGPAOk5uYTk0q1klc593jsdOpQidgvIvcoSUdrdcwANk48rLZ4aOacpUwcHoSfiqZ4debgyOWbw0s4QDiPDo850ZmEzng0D3iGZh4aJlo1207YqJYMor3NhuZJlkSHM6yOiHrjLKxYzJEKazrUA7fP1xpwRbYvsF67jnvZfKtsMzEuWAk5z387OFMxVCFr3M3D0SWkyal3IMLdCQ207hyH56poQ7Y4Sxxh8zYeXP8SFthBbHAlGB2VfQUH9FZ8oGkql2iJHuTr06vhwbsrwT08t6UCx0xRNSWaNy68gnANfbLhg6OZd2T14j8q2e1VDZCiR6Z9dKcrPqPxOo0oXpsdJLQqQMrwWKiUybi98n3kJ8Bayq4hPQ940k2XcYRgEuSQBiGpxb6Z5iAWZ51UsiflvW4KL3WI9Bs7dX8sGRT8p1AzxJ0FfAYYKIKlbehz30KJQpGZhHwpBOhD6fn07Q4OkAFfUAruURDtcrWo30MS2D4qcoOppriNiGq8w0RL54QpnysgwDERHEavlO1kb18sJ8zo0KRZwEi4eXearEVEh38T6v7fAQOCJ4M0ICXGyjIMd2ti4JHZ7Rrbg0g8xpbGz0qgs5h0xw0ZAYea14CMZ3r9sTIXU8nfeGQom9u1ByReZek8QCHHcZuOvdgybShg1ZmlBYVuoC7jkZuQtsc1ENZ54 Obsoletes: libnetcdf_c++4-1-mpi < 4.3.0-alt1