<86>Jan 10 09:19:04 userdel[18810]: delete user 'rooter'
<86>Jan 10 09:19:04 groupadd[18835]: group added to /etc/group: name=rooter, GID=591
<86>Jan 10 09:19:04 groupadd[18835]: group added to /etc/gshadow: name=rooter
<86>Jan 10 09:19:04 groupadd[18835]: new group: name=rooter, GID=591
<86>Jan 10 09:19:04 useradd[18920]: new user: name=rooter, UID=591, GID=591, home=/root, shell=/bin/bash
<86>Jan 10 09:19:04 userdel[19005]: delete user 'builder'
<86>Jan 10 09:19:04 userdel[19005]: removed group 'builder' owned by 'builder'
<86>Jan 10 09:19:04 userdel[19005]: removed shadow group 'builder' owned by 'builder'
<86>Jan 10 09:19:04 groupadd[19037]: group added to /etc/group: name=builder, GID=592
<86>Jan 10 09:19:04 groupadd[19037]: group added to /etc/gshadow: name=builder
<86>Jan 10 09:19:04 groupadd[19037]: new group: name=builder, GID=592
<86>Jan 10 09:19:04 useradd[19059]: new user: name=builder, UID=592, GID=592, home=/usr/src, shell=/bin/bash
warning: Macro %_altdir not found
warning: Macro %_altdir not found
warning: Macro %_altdir not found
warning: Macro %_altdir not found
warning: Macro %_altdir not found
<13>Jan 10 09:19:07 rpmi: libquadmath0-8.2.1-alt2 sisyphus.218691.100 1545948777 installed
<13>Jan 10 09:19:07 rpmi: libidn2-2.0.5-alt1 1526923875 installed
<13>Jan 10 09:19:07 rpmi: udev-rules-1:240-alt3 sisyphus.219090.100 1547064724 installed
<13>Jan 10 09:19:07 rpmi: libkmod-25-alt1 1522318408 installed
<13>Jan 10 09:19:07 rpmi: kmod-25-alt1 1522318408 installed
<13>Jan 10 09:19:07 rpmi: libgfortran4-7.3.1-alt7 sisyphus.214000.100 1542667145 installed
<13>Jan 10 09:19:07 rpmi: rpm-macros-info-install-6.5-alt1.1 1520363044 installed
<13>Jan 10 09:19:07 rpmi: libnuma-2.0.11-alt1 1450022594 installed
<13>Jan 10 09:19:07 rpmi: libmnl-1.0.4-alt1 1480571791 installed
<13>Jan 10 09:19:07 rpmi: gcc-fortran-common-1.4.23-alt1 sisyphus.218115.200 1545282875 installed
<13>Jan 10 09:19:07 rpmi: liblz4-1:1.8.3-alt2 sisyphus.217095.200 1547082375 installed
<13>Jan 10 09:19:07 rpmi: libiptables-1.4.21-alt3 1435789455 installed
<13>Jan 10 09:19:07 rpmi: msulogin-1.0-alt1 1366288515 installed
<13>Jan 10 09:19:07 rpmi: mount-2.32-alt2 1528296111 installed
<13>Jan 10 09:19:07 rpmi: libdevmapper-1.02.152-alt2 sisyphus.216915.100 1543418921 installed
<13>Jan 10 09:19:07 rpmi: sysvinit-2.88-alt5 1424350686 installed
<13>Jan 10 09:19:07 rpmi: libnetlink-4.20.0-alt1 sisyphus.219039.100 1546901094 installed
<13>Jan 10 09:19:07 rpmi: libnuma-devel-2.0.11-alt1 1450022594 installed
<13>Jan 10 09:19:08 rpmi: libgfortran5-8.2.1-alt2 sisyphus.218691.100 1545948777 installed
<13>Jan 10 09:19:08 rpmi: libquadmath8-devel-8.2.1-alt2 sisyphus.218691.100 1545948777 installed
<13>Jan 10 09:19:08 rpmi: libgfortran8-devel-8.2.1-alt2 sisyphus.218691.100 1545948777 installed
<13>Jan 10 09:19:08 rpmi: gcc8-fortran-8.2.1-alt2 sisyphus.218691.100 1545948777 installed
<13>Jan 10 09:19:08 rpmi: gcc-fortran-8-alt1 sisyphus.214000.40 1542664775 installed
<13>Jan 10 09:19:08 rpmi: libgfortran3-6.3.1-alt3.1 sisyphus.213581.600 1538069672 installed
<13>Jan 10 09:19:08 rpmi: libquadmath7-devel-7.3.1-alt7 sisyphus.214000.100 1542667145 installed
<13>Jan 10 09:19:08 rpmi: libgfortran7-devel-7.3.1-alt7 sisyphus.214000.100 1542667145 installed
<13>Jan 10 09:19:08 rpmi: tex-common-0.2-alt4 1244804096 installed
<13>Jan 10 09:19:08 rpmi: texi2dvi-6.5-alt1.1 1520363044 installed
<13>Jan 10 09:19:08 rpmi: perl-Unicode-Normalize-1:5.26.2-alt2 1534850821 installed
<13>Jan 10 09:19:08 rpmi: perl-Unicode-EastAsianWidth-1.40-alt1 sisyphus.217785.100 1544703272 installed
<13>Jan 10 09:19:08 rpmi: perl-Text-Unidecode-1.30-alt1 1480505027 installed
<13>Jan 10 09:19:08 rpmi: perl-Pod-Escapes-1.07-alt1 1418767892 installed
<13>Jan 10 09:19:08 rpmi: perl-Filter-1.59-alt1 1533737242 installed
<13>Jan 10 09:19:08 rpmi: perl-Encode-2.98-alt1 1525447819 installed
<13>Jan 10 09:19:08 rpmi: perl-libintl-1.31-alt1 sisyphus.216662.100 1542744839 installed
<13>Jan 10 09:19:08 rpmi: perl-Pod-Simple-3.35-alt1 1482098090 installed
<13>Jan 10 09:19:08 rpmi: makeinfo-6.5-alt1.1 1520363044 installed
<13>Jan 10 09:19:08 rpmi: zlib-devel-1.2.11-alt1 sisyphus.217171.100 1543710737 installed
<13>Jan 10 09:19:08 rpmi: libibumad-20.1-alt1 sisyphus.215851.40 1541165555 installed
<13>Jan 10 09:19:08 rpmi: libpci-3.6.2-alt1.S1 sisyphus.213446.100 1537513661 installed
<13>Jan 10 09:19:09 rpmi: pciids-20190107-alt1 sisyphus.219040.100 1546968054 installed
<13>Jan 10 09:19:09 rpmi: pciutils-3.6.2-alt1.S1 sisyphus.213446.100 1537513661 installed
<13>Jan 10 09:19:09 rpmi: libsz2-2.1-alt4 1300649104 installed
<13>Jan 10 09:19:09 rpmi: libnl3-3.4.0-alt2 1507570088 installed
<13>Jan 10 09:19:09 rpmi: libibverbs-20.1-alt1 sisyphus.215851.40 1541165555 installed
<13>Jan 10 09:19:09 rpmi: librdmacm-20.1-alt1 sisyphus.215851.40 1541165555 installed
<13>Jan 10 09:19:09 rpmi: tcsh-6.20.00-alt2 1503603381 installed
<13>Jan 10 09:19:09 rpmi: rpm-macros-mpi-selector-1.0.3-alt3 1504498675 installed
<13>Jan 10 09:19:09 rpmi: mpi-selector-1.0.3-alt3 1504498675 installed
<13>Jan 10 09:19:09 rpmi: openmpi-2.0.1-alt7 sisyphus.216567.400 1543514645 installed
<13>Jan 10 09:19:09 rpmi: libpnetcdf-1.8.1-alt1 1505818731 installed
<13>Jan 10 09:19:09 rpmi: libexpat-2.2.4-alt1 1503305345 installed
<13>Jan 10 09:19:09 rpmi: publicsuffix-list-dafsa-20181106-alt1 sisyphus.216228.100 1541611754 installed
<13>Jan 10 09:19:09 rpmi: libpsl-0.20.2-alt2 sisyphus.216228.200 1541611889 installed
<13>Jan 10 09:19:09 rpmi: libnghttp2-1.34.0-alt1 sisyphus.214524.100 1539249634 installed
<13>Jan 10 09:19:09 rpmi: libverto-0.3.0-alt1_5 1525957714 installed
<13>Jan 10 09:19:09 rpmi: libkeyutils-1.6-alt2 sisyphus.217337.100 1544003161 installed
<13>Jan 10 09:19:09 rpmi: libcom_err-1.44.5-alt1 sisyphus.218838.100 1546206118 installed
<13>Jan 10 09:19:09 rpmi: libbrotlicommon-1.0.7-alt1 sisyphus.215491.100 1540428597 installed
<13>Jan 10 09:19:09 rpmi: libbrotlidec-1.0.7-alt1 sisyphus.215491.100 1540428597 installed
<13>Jan 10 09:19:09 rpmi: libatm-2.5.1-alt5 sisyphus.218566.100 1545737770 installed
<13>Jan 10 09:19:09 rpmi: chrooted-0.3.9-alt1 1524554183 installed
<13>Jan 10 09:19:09 rpmi: chrooted-resolv-0.3.1-alt2 1176155250 installed
<13>Jan 10 09:19:09 rpmi: gcc-c++-common-1.4.23-alt1 sisyphus.218115.200 1545282875 installed
<13>Jan 10 09:19:09 rpmi: libstdc++8-devel-8.2.1-alt2 sisyphus.218691.100 1545948777 installed
<13>Jan 10 09:19:10 rpmi: gcc8-c++-8.2.1-alt2 sisyphus.218691.100 1545948777 installed
<13>Jan 10 09:19:10 rpmi: gcc-c++-8-alt1 sisyphus.214000.40 1542664775 installed
<13>Jan 10 09:19:10 rpmi: libseccomp-2.3.3-alt1.S1.1 1525143458 installed
<13>Jan 10 09:19:10 rpmi: libpcre2-10.32-alt1 sisyphus.212994.100 1536866761 installed
<13>Jan 10 09:19:10 rpmi: libjson-c-0.12.1-alt2 1517446106 installed
<13>Jan 10 09:19:10 rpmi: libargon2-20171227-alt2 sisyphus.216770.100 1542965282 installed
<13>Jan 10 09:19:10 rpmi: libgpg-error-1.31-alt1.S1 1529015802 installed
<13>Jan 10 09:19:10 rpmi: libgcrypt20-1.8.3-alt4 sisyphus.218050.200 1545223289 installed
<13>Jan 10 09:19:10 rpmi: libsystemd-1:240-alt3 sisyphus.219090.100 1547064797 installed
<13>Jan 10 09:19:10 rpmi: libcryptsetup-2.0.6-alt1 sisyphus.217248.100 1543864717 installed
<13>Jan 10 09:19:10 rpmi: hwclock-1:2.32-alt2 1528296111 installed
<13>Jan 10 09:19:10 rpmi: startup-0.9.9.6-alt1 sisyphus.215964.200 1542884274 installed
<13>Jan 10 09:19:11 rpmi: systemd-utils-1:240-alt3 sisyphus.219090.100 1547064797 installed
<13>Jan 10 09:19:11 rpmi: udev-hwdb-1:240-alt3 sisyphus.219090.100 1547064724 installed
<13>Jan 10 09:19:11 rpmi: hashalot-0.3-alt1.qa1 1366323553 installed
<13>Jan 10 09:19:11 rpmi: losetup-2.32-alt2 1528296111 installed
<13>Jan 10 09:19:11 rpmi: lsblk-2.32-alt2 1528296111 installed
<13>Jan 10 09:19:11 rpmi: dmsetup-1.02.152-alt2 sisyphus.216915.100 1543418921 installed
<86>Jan 10 09:19:11 groupadd[51120]: group added to /etc/group: name=tape, GID=499
<86>Jan 10 09:19:11 groupadd[51120]: group added to /etc/gshadow: name=tape
<86>Jan 10 09:19:11 groupadd[51120]: new group: name=tape, GID=499
<86>Jan 10 09:19:11 groupadd[51136]: group added to /etc/group: name=dialout, GID=498
<86>Jan 10 09:19:11 groupadd[51136]: group added to /etc/gshadow: name=dialout
<86>Jan 10 09:19:11 groupadd[51136]: new group: name=dialout, GID=498
<86>Jan 10 09:19:11 groupadd[51146]: group added to /etc/group: name=input, GID=497
<86>Jan 10 09:19:11 groupadd[51146]: group added to /etc/gshadow: name=input
<86>Jan 10 09:19:11 groupadd[51146]: new group: name=input, GID=497
<86>Jan 10 09:19:11 groupadd[51159]: group added to /etc/group: name=video, GID=496
<86>Jan 10 09:19:11 groupadd[51159]: group added to /etc/gshadow: name=video
<86>Jan 10 09:19:11 groupadd[51159]: new group: name=video, GID=496
<86>Jan 10 09:19:11 groupadd[51168]: group added to /etc/group: name=render, GID=495
<86>Jan 10 09:19:11 groupadd[51168]: new group: name=render, GID=495
<13>Jan 10 09:19:11 rpmi: udev-1:240-alt3 sisyphus.219090.100 1547064797 installed
<13>Jan 10 09:19:11 rpmi: libtasn1-4.13-alt2 1521133850 installed
<13>Jan 10 09:19:11 rpmi: libp11-kit-0.23.9-alt5 1525798298 installed
<13>Jan 10 09:19:11 rpmi: bc-1:1.07.1-alt1 sisyphus.218158.200 1545308145 installed
<13>Jan 10 09:19:11 rpmi: rpm-macros-alternatives-0.5.0-alt1 sisyphus.219012.300 1546745004 installed
<13>Jan 10 09:19:11 rpmi: alternatives-0.5.0-alt1 sisyphus.219012.300 1546745004 installed
<13>Jan 10 09:19:11 rpmi: libhdf5-8-mpi-1.8.13-alt4 1533048438 installed
<13>Jan 10 09:19:11 rpmi: ca-certificates-2018.11.12-alt1 sisyphus.216395.300 1542114035 installed
<13>Jan 10 09:19:11 rpmi: ca-trust-0.1.1-alt2 1515595785 installed
<13>Jan 10 09:19:11 rpmi: p11-kit-trust-0.23.9-alt5 1525798298 installed
<13>Jan 10 09:19:11 rpmi: libcrypto1.1-1.1.0j-alt1 sisyphus.216647.100 1542743878 installed
<13>Jan 10 09:19:11 rpmi: libssl1.1-1.1.0j-alt1 sisyphus.216647.100 1542743878 installed
<86>Jan 10 09:19:11 groupadd[52324]: group added to /etc/group: name=_keytab, GID=494
<86>Jan 10 09:19:11 groupadd[52324]: group added to /etc/gshadow: name=_keytab
<86>Jan 10 09:19:11 groupadd[52324]: new group: name=_keytab, GID=494
<13>Jan 10 09:19:11 rpmi: libkrb5-1.16.3-alt1 sisyphus.219042.100 1547045815 installed
<86>Jan 10 09:19:11 groupadd[52613]: group added to /etc/group: name=sasl, GID=493
<86>Jan 10 09:19:11 groupadd[52613]: group added to /etc/gshadow: name=sasl
<86>Jan 10 09:19:11 groupadd[52613]: new group: name=sasl, GID=493
<13>Jan 10 09:19:11 rpmi: libsasl2-3-2.1.27-alt1 sisyphus.218476.200 1545647755 installed
<13>Jan 10 09:19:11 rpmi: libldap-2.4.46-alt1 1535562135 installed
<13>Jan 10 09:19:11 rpmi: libcurl-7.63.0-alt1 sisyphus.217831.100 1544762811 installed
<13>Jan 10 09:19:11 rpmi: libnetcdf11-mpi-4.4.1.1-alt2 1505818960 installed
<86>Jan 10 09:19:11 groupadd[52896]: group added to /etc/group: name=iputils, GID=492
<86>Jan 10 09:19:11 groupadd[52896]: group added to /etc/gshadow: name=iputils
<86>Jan 10 09:19:11 groupadd[52896]: new group: name=iputils, GID=492
<86>Jan 10 09:19:11 useradd[52910]: new user: name=iputils, UID=499, GID=492, home=/dev/null, shell=/dev/null
<86>Jan 10 09:19:11 groupadd[52929]: group added to /etc/group: name=netadmin, GID=491
<86>Jan 10 09:19:11 groupadd[52929]: group added to /etc/gshadow: name=netadmin
<86>Jan 10 09:19:11 groupadd[52929]: new group: name=netadmin, GID=491
<13>Jan 10 09:19:11 rpmi: iputils-20180629-alt1 1535650704 installed
sysctl: cannot stat /proc/sys/net/ipv4/ping_group_range: No such file or directory
<13>Jan 10 09:19:11 rpmi: iproute2-4.20.0-alt1 sisyphus.219039.100 1546901094 installed
<13>Jan 10 09:19:11 rpmi: rdma-core-20.1-alt1 sisyphus.215851.40 1541165555 installed
<13>Jan 10 09:19:11 rpmi: ibacm-20.1-alt1 sisyphus.215851.40 1541165555 installed
<13>Jan 10 09:19:12 rpmi: rdma-core-devel-20.1-alt1 sisyphus.215851.40 1541165555 installed
<13>Jan 10 09:19:12 rpmi: openmpi-devel-2.0.1-alt7 sisyphus.216567.400 1543514645 installed
<13>Jan 10 09:19:12 rpmi: libhdf5-mpi-devel-1.8.13-alt4 1533048438 installed
<13>Jan 10 09:19:12 rpmi: libnetcdf-mpi-devel-4.4.1.1-alt2 1505818960 installed
<13>Jan 10 09:19:12 rpmi: libcurl-devel-7.63.0-alt1 sisyphus.217831.100 1544762811 installed
<13>Jan 10 09:19:12 rpmi: libexpat-devel-2.2.4-alt1 1503305345 installed
<13>Jan 10 09:19:12 rpmi: texinfo-6.5-alt1.1 1520363044 installed
<13>Jan 10 09:19:12 rpmi: flex-2.6.4.0.88.9801-alt1 sisyphus.218904.100 1546473555 installed
Building target platforms: i586
Building for target i586
Wrote: /usr/src/in/nosrpm/libnetcdf_c++-4-mpi-4.2-alt4.nosrc.rpm
Installing libnetcdf_c++-4-mpi-4.2-alt4.src.rpm
Building target platforms: i586
Building for target i586
Executing(%prep): /bin/sh -e /usr/src/tmp/rpm-tmp.26213
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ rm -rf libnetcdf_c++-4-mpi-4.2
+ echo 'Source #0 (libnetcdf_c++-4-mpi-4.2.tar):'
Source #0 (libnetcdf_c++-4-mpi-4.2.tar):
+ /bin/tar -xf /usr/src/RPM/SOURCES/libnetcdf_c++-4-mpi-4.2.tar
+ cd libnetcdf_c++-4-mpi-4.2
+ /bin/chmod -c -Rf u+rwX,go-w .
+ exit 0
Executing(%build): /bin/sh -e /usr/src/tmp/rpm-tmp.26213
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd libnetcdf_c++-4-mpi-4.2
+ mpi-selector --set openmpi
+ source /usr/lib/openmpi/bin/mpivars.sh
++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games
++ grep -q /usr/lib/openmpi/bin
++ PATH=/usr/lib/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games
++ export PATH
++ echo
++ grep -q /usr/lib/openmpi/lib
++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib
++ export LD_LIBRARY_PATH
++ echo
++ grep -q /usr/lib/openmpi/man
++ MANPATH=/usr/lib/openmpi/man:
++ export MANPATH
+ export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib'
+ OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib'
+ autoreconf -fisv
autoreconf-default: Entering directory `.'
autoreconf-default: configure.ac: not using Gettext
autoreconf-default: running: aclocal --force -I m4
configure.ac:95: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from...
../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from...
m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from...
m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from...
m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from...
m4/libtool.m4:143: _LT_SETUP is expanded from...
m4/libtool.m4:69: LT_INIT is expanded from...
configure.ac:95: the top level
configure.ac:95: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from...
../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from...
m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from...
m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from...
m4/libtool.m4:143: _LT_SETUP is expanded from...
m4/libtool.m4:69: LT_INIT is expanded from...
configure.ac:95: the top level
configure.ac:95: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from...
../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from...
m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from...
m4/libtool.m4:5428: _LT_LANG_CXX_CONFIG is expanded from...
m4/libtool.m4:816: _LT_LANG is expanded from...
m4/libtool.m4:799: LT_LANG is expanded from...
m4/libtool.m4:827: _LT_LANG_DEFAULT_CONFIG is expanded from...
m4/libtool.m4:143: _LT_SETUP is expanded from...
m4/libtool.m4:69: LT_INIT is expanded from...
configure.ac:95: the top level
configure.ac:95: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from...
../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from...
m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from...
m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from...
m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from...
m4/libtool.m4:143: _LT_SETUP is expanded from...
m4/libtool.m4:69: LT_INIT is expanded from...
configure.ac:95: the top level
configure.ac:95: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from...
../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from...
m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from...
m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from...
m4/libtool.m4:143: _LT_SETUP is expanded from...
m4/libtool.m4:69: LT_INIT is expanded from...
configure.ac:95: the top level
configure.ac:95: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from...
../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from...
m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from...
m4/libtool.m4:5428: _LT_LANG_CXX_CONFIG is expanded from...
m4/libtool.m4:816: _LT_LANG is expanded from...
m4/libtool.m4:799: LT_LANG is expanded from...
m4/libtool.m4:827: _LT_LANG_DEFAULT_CONFIG is expanded from...
m4/libtool.m4:143: _LT_SETUP is expanded from...
m4/libtool.m4:69: LT_INIT is expanded from...
configure.ac:95: the top level
autoreconf-default: configure.ac: tracing
configure.ac:95: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from...
../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from...
m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from...
m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from...
m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from...
m4/libtool.m4:143: _LT_SETUP is expanded from...
m4/libtool.m4:69: LT_INIT is expanded from...
configure.ac:95: the top level
configure.ac:95: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from...
../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from...
m4/libtool.m4:4211: _LT_LINKER_SHLIBS is expanded from...
m4/libtool.m4:5343: _LT_LANG_C_CONFIG is expanded from...
m4/libtool.m4:143: _LT_SETUP is expanded from...
m4/libtool.m4:69: LT_INIT is expanded from...
configure.ac:95: the top level
configure.ac:95: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/autoconf/lang.m4:194: AC_LANG_CONFTEST is expanded from...
../../lib/autoconf/general.m4:2663: _AC_LINK_IFELSE is expanded from...
../../lib/autoconf/general.m4:2680: AC_LINK_IFELSE is expanded from...
m4/libtool.m4:1084: _LT_SYS_MODULE_PATH_AIX is expanded from...
m4/libtool.m4:5428: _LT_LANG_CXX_CONFIG is expanded from...
m4/libtool.m4:816: _LT_LANG is expanded from...
m4/libtool.m4:799: LT_LANG is expanded from...
m4/libtool.m4:827: _LT_LANG_DEFAULT_CONFIG is expanded from...
m4/libtool.m4:143: _LT_SETUP is expanded from...
m4/libtool.m4:69: LT_INIT is expanded from...
configure.ac:95: the top level
autoreconf-default: running: libtoolize --force --install
libtoolize-default: putting auxiliary files in `.'.
libtoolize-default: linking file `./config.guess'
libtoolize-default: linking file `./config.sub'
libtoolize-default: linking file `./install-sh'
libtoolize-default: linking file `./ltmain.sh'
libtoolize-default: putting macros in AC_CONFIG_MACRO_DIR, `m4'.
libtoolize-default: linking file `m4/libtool.m4'
libtoolize-default: linking file `m4/ltoptions.m4'
libtoolize-default: linking file `m4/ltsugar.m4'
libtoolize-default: linking file `m4/ltversion.m4'
libtoolize-default: linking file `m4/lt~obsolete.m4'
autoreconf-default: configure.ac: not using Intltool
autoreconf-default: configure.ac: not using gtk-doc
autoreconf-default: running: /usr/bin/autoconf-2.60 --force
autoreconf-default: running: /usr/bin/autoheader-2.60 --force
autoreconf-default: running: automake --add-missing --force-missing
configure.ac:33: warning: support for distribution archives compressed with legacy program 'compress' is deprecated.
configure.ac:33: It will be removed in Automake 2.0
configure.ac:95: installing './compile'
parallel-tests: installing './test-driver'
autoreconf-default: Leaving directory `.'
+ CFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC'
+ export CFLAGS
+ CXXFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC'
+ export CXXFLAGS
+ FFLAGS='-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC'
+ export FFLAGS
+ '[' -n '' ']'
++ sed -r 's/(^|[[:space:]]+)-[^m][^[:space:]]*//g'
++ printf %s '-pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC'
+ ASFLAGS=' -march=i586 -mtune=generic'
+ export ASFLAGS
+ export lt_cv_deplibs_check_method=pass_all
+ lt_cv_deplibs_check_method=pass_all
+ xargs -ri dirname -- '{}'
+ readlink -e -- ./configure
+ xargs -ri find '{}' -type f '(' -name config.sub -or -name config.guess ')' -printf '%h/\n'
+ sort -u
+ xargs -rn1 install -pm755 -- /usr/share/gnu-config/config.sub /usr/share/gnu-config/config.guess
+ ./configure --build=i586-alt-linux --host=i586-alt-linux --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib --libexecdir=/usr/lib --localstatedir=/var/lib --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-dependency-tracking --without-included-gettext --enable-shared --enable-static=no --bindir=/usr/lib/openmpi/bin --libdir=/usr/lib/openmpi/lib --includedir=/usr/lib/openmpi/include
configure: WARNING: unrecognized options: --without-included-gettext
configure: netCDF-cxx 4.2
checking build system type... i586-alt-linux-gnu
checking host system type... i586-alt-linux-gnu
checking target system type... i586-alt-linux-gnu
checking for a BSD-compatible install... /bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
configure: checking user options
checking whether extra valgrind tests should be run... no
checking whether netCDF extra tests should be run (developers only)... no
checking whether large file (> 2GB) tests should be run... no
checking where to put large temp files if large file tests are run... .
configure: finding C++ compiler (will not be used if C++ API is not desired)
checking for i586-alt-linux-g++... i586-alt-linux-g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether i586-alt-linux-g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of i586-alt-linux-g++... none
configure: setting up libtool
checking how to print strings... printf
checking for i586-alt-linux-gcc... i586-alt-linux-gcc
checking whether we are using the GNU C compiler... yes
checking whether i586-alt-linux-gcc accepts -g... yes
checking for i586-alt-linux-gcc option to accept ISO C89... none needed
checking whether i586-alt-linux-gcc understands -c and -o together... yes
checking dependency style of i586-alt-linux-gcc... none
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by i586-alt-linux-gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert i586-alt-linux-gnu file names to i586-alt-linux-gnu format... func_convert_file_noop
checking how to convert i586-alt-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for i586-alt-linux-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... (cached) pass_all
checking for i586-alt-linux-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for i586-alt-linux-ar... no
checking for ar... ar
checking for archiver @FILE support... @
checking for i586-alt-linux-strip... no
checking for strip... strip
checking for i586-alt-linux-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from i586-alt-linux-gcc object... ok
checking for sysroot... no
checking for i586-alt-linux-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... i586-alt-linux-gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if i586-alt-linux-gcc supports -fno-rtti -fno-exceptions... no
checking for i586-alt-linux-gcc option to produce PIC... -fPIC -DPIC
checking if i586-alt-linux-gcc PIC flag -fPIC -DPIC works... yes
checking if i586-alt-linux-gcc static flag -static works... no
checking if i586-alt-linux-gcc supports -c -o file.o... yes
checking if i586-alt-linux-gcc supports -c -o file.o... (cached) yes
checking whether the i586-alt-linux-gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... i586-alt-linux-g++ -E
checking for ld used by i586-alt-linux-g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the i586-alt-linux-g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for i586-alt-linux-g++ option to produce PIC... -fPIC -DPIC
checking if i586-alt-linux-g++ PIC flag -fPIC -DPIC works... yes
checking if i586-alt-linux-g++ static flag -static works... no
checking if i586-alt-linux-g++ supports -c -o file.o... yes
checking if i586-alt-linux-g++ supports -c -o file.o... (cached) yes
checking whether the i586-alt-linux-g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
configure: finding other utilities
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
checking netcdf.h usability... yes
checking netcdf.h presence... no
configure: WARNING: netcdf.h: accepted by the compiler, rejected by the preprocessor!
configure: WARNING: netcdf.h: proceeding with the compiler's result
checking for netcdf.h... yes
checking for library containing nc_open... -lnetcdf
checking for nc_def_opaque... yes
checking for nccreate... yes
checking for nc_set_log_level... no
checking for nc_use_parallel_enabled... yes
configure: generating header files and makefiles
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating man4/Makefile
config.status: creating cxx/Makefile
config.status: creating examples/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --without-included-gettext
+ make -j8
make all-recursive
Making all in cxx
make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
/bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o libnetcdf_c___la-ncvalues.lo `test -f 'ncvalues.cpp' || echo './'`ncvalues.cpp
libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c ncvalues.cpp -fPIC -DPIC -o .libs/libnetcdf_c___la-ncvalues.o
make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
/bin/sh ../libtool --tag=CXX --mode=compile i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c -o libnetcdf_c___la-netcdf.lo `test -f 'netcdf.cpp' || echo './'`netcdf.cpp
libtool: compile: i586-alt-linux-g++ -DHAVE_CONFIG_H -I. -I.. -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -c netcdf.cpp -fPIC -DPIC -o .libs/libnetcdf_c___la-netcdf.o
netcdf.cpp: In member function 'int NcVar::num_atts() const':
netcdf.cpp:650:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
if (the_file->is_valid())
^
make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
/bin/sh ../libtool --tag=CXX --mode=link i586-alt-linux-g++ -pipe -frecord-gcc-switches -Wall -g -O2 -march=i586 -mtune=generic -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/netcdf -fno-strict-aliasing -fPIC -DPIC -version-number 4:2:0 -o libnetcdf_c++.la -rpath /usr/lib/openmpi/lib libnetcdf_c___la-netcdf.lo libnetcdf_c___la-ncvalues.lo -lnetcdf
libtool: link: i586-alt-linux-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/i586-alt-linux/8/../../../crti.o /usr/lib/gcc/i586-alt-linux/8/crtbeginS.o .libs/libnetcdf_c___la-netcdf.o .libs/libnetcdf_c___la-ncvalues.o -lnetcdf -L/usr/lib/gcc/i586-alt-linux/8 -L/usr/lib/gcc/i586-alt-linux/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/i586-alt-linux/8/crtendS.o /usr/lib/gcc/i586-alt-linux/8/../../../crtn.o -O2 -march=i586 -mtune=generic -Wl,-soname -Wl,libnetcdf_c++.so.4 -o .libs/libnetcdf_c++.so.4.2.0
libtool: link: (cd ".libs" && rm -f "libnetcdf_c++.so.4" && ln -s "libnetcdf_c++.so.4.2.0" "libnetcdf_c++.so.4")
libtool: link: (cd ".libs" && rm -f "libnetcdf_c++.so" && ln -s "libnetcdf_c++.so.4.2.0" "libnetcdf_c++.so")
libtool: link: ( cd ".libs" && rm -f "libnetcdf_c++.la" && ln -s "../libnetcdf_c++.la" "libnetcdf_c++.la" )
make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
Making all in examples
make[2]: Nothing to be done for 'all'.
Making all in man4
make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/man4'
Updating ./version-cxx.texi
make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/man4'
+ exit 0
Executing(%install): /bin/sh -e /usr/src/tmp/rpm-tmp.61713
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ /bin/chmod -Rf u+rwX -- /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot
+ :
+ /bin/rm -rf -- /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot
+ cd libnetcdf_c++-4-mpi-4.2
+ source /usr/lib/openmpi/bin/mpivars.sh
++ echo /usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games
++ grep -q /usr/lib/openmpi/bin
++ PATH=/usr/lib/openmpi/bin:/usr/src/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/games
++ export PATH
++ echo
++ grep -q /usr/lib/openmpi/lib
++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib
++ export LD_LIBRARY_PATH
++ echo
++ grep -q /usr/lib/openmpi/man
++ MANPATH=/usr/lib/openmpi/man:
++ export MANPATH
+ export 'OMPI_LDFLAGS=-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib'
+ OMPI_LDFLAGS='-Wl,--as-needed,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib'
+ make 'INSTALL=/bin/install -p' install DESTDIR=/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot
make: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2'
Making install in cxx
make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
/bin/mkdir -p '/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/lib'
/bin/sh ../libtool --mode=install /bin/install -p libnetcdf_c++.la '/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/lib'
libtool: install: /bin/install -p .libs/libnetcdf_c++.so.4.2.0 /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/lib/libnetcdf_c++.so.4.2.0
libtool: install: (cd /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/lib && { ln -s -f libnetcdf_c++.so.4.2.0 libnetcdf_c++.so.4 || { rm -f libnetcdf_c++.so.4 && ln -s libnetcdf_c++.so.4.2.0 libnetcdf_c++.so.4; }; })
libtool: install: (cd /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/lib && { ln -s -f libnetcdf_c++.so.4.2.0 libnetcdf_c++.so || { rm -f libnetcdf_c++.so && ln -s libnetcdf_c++.so.4.2.0 libnetcdf_c++.so; }; })
libtool: install: /bin/install -p .libs/libnetcdf_c++.lai /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/lib/libnetcdf_c++.la
libtool: install: warning: remember to run `libtool --finish /usr/lib/openmpi/lib'
/bin/mkdir -p '/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include'
/bin/install -p -m 644 netcdfcpp.h ncvalues.h netcdf.hh '/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include'
make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/cxx'
Making install in examples
make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/examples'
make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/examples'
make[2]: Nothing to be done for 'install-exec-am'.
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/examples'
make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/examples'
Making install in man4
make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/man4'
restore=: && backupdir=".am$$" && \
am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \
rm -rf $backupdir && mkdir $backupdir && \
if (/bin/sh /usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/missing makeinfo --version) >/dev/null 2>&1; then \
for f in netcdf-cxx.info netcdf-cxx.info-[0-9] netcdf-cxx.info-[0-9][0-9] netcdf-cxx.i[0-9] netcdf-cxx.i[0-9][0-9]; do \
if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \
done; \
else :; fi && \
cd "$am__cwd"; \
if /bin/sh /usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/missing makeinfo -I . \
-o netcdf-cxx.info netcdf-cxx.texi; \
then \
rc=0; \
CDPATH="${ZSH_VERSION+.}:" && cd .; \
else \
rc=$?; \
CDPATH="${ZSH_VERSION+.}:" && cd . && \
$restore $backupdir/* `echo "./netcdf-cxx.info" | sed 's|[^/]*$||'`; \
fi; \
rm -rf $backupdir; exit $rc
netcdf-cxx.texi:8: warning: @setcontentsaftertitlepage is obsolete; move your @contents command if you want the contents after the title page
./defines.texi:86: warning: multiple @setchapternewpage
make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/man4'
make[2]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/info'
/bin/install -p -m 644 ./netcdf-cxx.info '/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/info'
make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/man4'
make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2/man4'
make[1]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2'
make[2]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2'
make[2]: Nothing to be done for 'install-exec-am'.
make install-data-hook
make[3]: Entering directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2'
+-------------------------------------------------------------+
| Congratulations! You have successfully installed the netCDF |
| C++ Libaray |
| |
| CAUTION: |
| |
| If you have not already run "make check", then we strongly |
| recommend you do so. It does not take very long. |
| |
| Before using netCDF to store important data, test your |
| build with "make check". |
| |
| NetCDF is tested nightly on many platforms at Unidata |
| but your platform is probably different in some ways. |
| |
| If any tests fail, please see the netCDF web site: |
| http://www.unidata.ucar.edu/software/netcdf/ |
| |
| NetCDF is developed and maintained at the Unidata Program |
| Center. Unidata provides a broad array of data and software |
| tools for use in geoscience education and research. |
| http://www.unidata.ucar.edu |
+-------------------------------------------------------------+
make[3]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2'
make[2]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2'
make[1]: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2'
make: Leaving directory '/usr/src/RPM/BUILD/libnetcdf_c++-4-mpi-4.2'
+ install -d /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include/netcdf
+ mv /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include/ncvalues.h /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include/netcdf.hh /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include/netcdfcpp.h /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include/netcdf/
+ rm -f /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/lib/libnetcdf_c++.la
+ install -d /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/etc/alternatives/packages.d
+ mkdir -p /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib
+ pushd /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/lib
~/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/lib ~/RPM/BUILD/libnetcdf_c++-4-mpi-4.2
+ for i in libnetcdf_c++.so.*
+ ln -s ../../usr/lib/openmpi/lib/libnetcdf_c++.so.4 /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/
+ echo '/usr/lib/libnetcdf_c++.so.4 /usr/lib/openmpi/lib/libnetcdf_c++.so.4 30'
+ for i in libnetcdf_c++.so.*
+ ln -s ../../usr/lib/openmpi/lib/libnetcdf_c++.so.4.2.0 /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/
+ echo '/usr/lib/libnetcdf_c++.so.4.2.0 /usr/lib/openmpi/lib/libnetcdf_c++.so.4.2.0 30'
++ ls libnetcdf_c++.so
+ for i in $(ls *.so)
+ echo '/usr/lib/libnetcdf_c++.so /usr/lib/openmpi/lib/libnetcdf_c++.so 30'
+ popd
~/RPM/BUILD/libnetcdf_c++-4-mpi-4.2
+ /usr/lib/rpm/brp-alt
Cleaning files in /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot (auto)
mode of './usr/lib/openmpi/lib/libnetcdf_c++.so.4.2.0' changed from 0755 (rwxr-xr-x) to 0644 (rw-r--r--)
Verifying and fixing files in /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot (binconfig,pkgconfig,libtool,desktop)
Checking contents of files in /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/ (default)
Compressing files in /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot (auto)
Verifying info files in /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/info (normal)
Adjusting library links in /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot
./usr/lib:
./usr/lib/openmpi/lib:
libnetcdf_c++.so.4 -> libnetcdf_c++.so.4.2.0
Verifying ELF objects in /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot (arch=normal,fhs=normal,lfs=relaxed,lint=relaxed,rpath=normal,stack=normal,textrel=normal,unresolved=normal)
Hardlinking identical .pyc and .pyo files
Processing files: libnetcdf_c++-4-mpi-4.2-alt4
Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.23711
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd libnetcdf_c++-4-mpi-4.2
+ DOCDIR=/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-4.2
+ export DOCDIR
+ rm -rf /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-4.2
+ /bin/mkdir -p /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-4.2
+ cp -prL COPYRIGHT /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-4.2
+ chmod -R go-w /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-4.2
+ chmod -R a+rX /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-4.2
+ exit 0
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.uc4RyO
find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell)
warning: hash collision: _ZN13NcValues_longC1ERKS_ _ZN5NcVar3putEPKllllll
warning: hash collision: _ZN13NcValues_longC1ElPKl _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED1Ev
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.Veq2AJ
find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks)
++ /bin/sed -e '/^debug.*(libnetcdf\.so.*/s/^/libnetcdf11-mpi-debuginfo\t/'
Provides: libnetcdf_c++-mpi = 4.2-alt4, libnetcdf_c++-4-mpi = 4.2-alt4, /usr/lib/libnetcdf_c++.so.4 = 30, /usr/lib/libnetcdf_c++.so.4.2.0 = 30, libnetcdf_c++.so.4 = set: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
Requires: libhdf5-8-mpi, libnetcdf11-mpi, /etc/alternatives/packages.d, libc.so.6(GLIBC_2.0), libc.so.6(GLIBC_2.1.3), libc.so.6(GLIBC_2.4), libgcc_s.so.1(GCC_3.0), libnetcdf.so.11 >= set:oitpZH0nFmdtO6DUe5cR2i5WHqrmak4Z29VKNABIkQOKpVZ2GUvgXAeJRbmn4GGhQZ6dr3o2FldfilfTZk3kiqAQIID0L6bECbWHsxaIUaOMkSb11wtwDYWwrZFARMrxUX4cC5sBEZhQ5qkCuct8N00ZcHcjYHDAeJpg7GSTiC2, libstdc++.so.6(CXXABI_1.3), libstdc++.so.6(CXXABI_1.3.8), libstdc++.so.6(CXXABI_1.3.9), libstdc++.so.6(GLIBCXX_3.4), libstdc++.so.6(GLIBCXX_3.4.11), libstdc++.so.6(GLIBCXX_3.4.21), libstdc++.so.6(GLIBCXX_3.4.9), rtld(GNU_HASH)
Requires(rpmlib): rpmlib(SetVersions)
Requires(post): alternatives
Requires(preun): alternatives
Conflicts: libnetcdf_c++ < 4.0.1-alt6, libnetcdf_c++-4-mpi < 4.2-alt4
Obsoletes: libnetcdf_c++-4-mpi < 4.2-alt4
Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.9cAT4a
Creating libnetcdf_c++-4-mpi-debuginfo package
Processing files: libnetcdf_c++-mpi-devel-4.2-alt4
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.4fDTuW
find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.yVCwm4
find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks)
In file included from /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include/netcdf/netcdfcpp.h:13,
from /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include/netcdf/netcdf.hh:1:
/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include/netcdf/ncvalues.h:13:10: fatal error: iostream: No such file or directory
#include <iostream>
^~~~~~~~~~
compilation terminated.
cpp.req: /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/lib/openmpi/include/netcdf/netcdf.hh: cpp failed, trying c++ mode
++ /bin/sed -e '/^debug.*(libnetcdf\.so.*/s/^/libnetcdf11-mpi-debuginfo\t/'
Provides: /usr/lib/libnetcdf_c++.so = 30
Requires: libnetcdf_c++-4-mpi = 4.2-alt4, libnetcdf-mpi-devel, /etc/alternatives/packages.d, /usr/lib/openmpi/lib/libnetcdf_c++.so.4.2.0
Requires(post): alternatives
Requires(preun): alternatives
Finding debuginfo files (using /usr/lib/rpm/find-debuginfo-files)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.ozNVIj
Processing files: libnetcdf_c++-4-mpi-doc-4.2-alt4
Executing(%doc): /bin/sh -e /usr/src/tmp/rpm-tmp.3384
+ umask 022
+ /bin/mkdir -p /usr/src/RPM/BUILD
+ cd /usr/src/RPM/BUILD
+ cd libnetcdf_c++-4-mpi-4.2
+ DOCDIR=/usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-doc-4.2
+ export DOCDIR
+ rm -rf /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-doc-4.2
+ /bin/mkdir -p /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-doc-4.2
+ cp -prL man4/netcdf-cxx.html man4/netcdf-cxx.pdf examples /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-doc-4.2
+ chmod -R go-w /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-doc-4.2
+ chmod -R a+rX /usr/src/tmp/libnetcdf_c++-4-mpi-buildroot/usr/share/doc/libnetcdf_c++-4-mpi-doc-4.2
+ exit 0
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.FfCCa5
find-provides: running scripts (alternatives,debuginfo,lib,pam,perl,pkgconfig,python,shell)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.FxmvL8
find-requires: running scripts (cpp,debuginfo,files,lib,pam,perl,pkgconfig,pkgconfiglib,python,rpmlib,shebang,shell,static,symlinks)
Conflicts: libnetcdf_c++-4-seq-doc
Processing files: libnetcdf_c++-4-mpi-debuginfo-4.2-alt4
Finding Provides (using /usr/lib/rpm/find-provides)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.bbT4Sf
find-provides: running scripts (debuginfo)
Finding Requires (using /usr/lib/rpm/find-requires)
Executing: /bin/sh -e /usr/src/tmp/rpm-tmp.gdhCuJ
find-requires: running scripts (debuginfo)
++ /bin/sed -e '/^debug.*(libnetcdf\.so.*/s/^/libnetcdf11-mpi-debuginfo\t/'
--- find-requires-deps 2019-01-10 09:19:55.221259779 +0000
+++ filter-requires-deps 2019-01-10 09:19:55.224259779 +0000
@@ -2,3 +2,3 @@
debug(libgcc_s.so.1)
-debug(libnetcdf.so.11)
+libnetcdf11-mpi-debuginfo debug(libnetcdf.so.11)
debug(libstdc++.so.6)
Provides: debug(libnetcdf_c++.so.4)
Requires: libnetcdf_c++-4-mpi = 4.2-alt4, debug(libc.so.6), debug(libgcc_s.so.1), libnetcdf11-mpi-debuginfo, debug(libnetcdf.so.11), debug(libstdc++.so.6)
Removing 1 extra deps from libnetcdf_c++-mpi-devel due to dependency on libnetcdf_c++-4-mpi
Removing 2 extra deps from libnetcdf_c++-mpi-devel due to repentancy on libnetcdf_c++-4-mpi
Wrote: /usr/src/RPM/RPMS/i586/libnetcdf_c++-4-mpi-4.2-alt4.i586.rpm
Wrote: /usr/src/RPM/RPMS/i586/libnetcdf_c++-mpi-devel-4.2-alt4.i586.rpm
Wrote: /usr/src/RPM/RPMS/noarch/libnetcdf_c++-4-mpi-doc-4.2-alt4.noarch.rpm
Wrote: /usr/src/RPM/RPMS/i586/libnetcdf_c++-4-mpi-debuginfo-4.2-alt4.i586.rpm
17.07user 2.83system 0:38.33elapsed 51%CPU (0avgtext+0avgdata 62888maxresident)k
0inputs+0outputs (0major+1144402minor)pagefaults 0swaps
31.42user 6.48system 1:00.19elapsed 62%CPU (0avgtext+0avgdata 121828maxresident)k
5240inputs+0outputs (0major+1806269minor)pagefaults 0swaps